BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045652
(621 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 21/298 (7%)
Query: 301 GQKGVFGLPDLMKAA-----AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARD-AF 354
GQ F L +L A+ +LG GG G YK +ADG V VKR+KE + F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 355 DTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
TEV + H N+L + E+LLVY Y+ GS+ L +R S L WP R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKR 133
Query: 415 LKIVQGIARGIGYLHTELAHLD--LPHGNLKSSNIFISPENEPLISEFGFYTMINSANL- 471
+I G ARG+ YLH H D + H ++K++NI + E E ++ +FG +++ +
Sbjct: 134 QRIALGSARGLAYLHD---HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 472 ----AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVV 525
+ + APE + +GK + K DV+ G+++LE++TG+ F L N + + ++
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN-DDDVMLL 249
Query: 526 EWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRI 583
+WV E ++ L+D ++ + E+EQL+++ CTQS P +R +M E VR +
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 154/296 (52%), Gaps = 21/296 (7%)
Query: 301 GQKGVFGLPDLMKAA-----AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARD-AF 354
GQ F L +L A+ +LG GG G YK +ADG V VKR+KE + F
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQF 82
Query: 355 DTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
TEV + H N+L + E+LLVY Y+ GS+ L +R S L WP R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKR 141
Query: 415 LKIVQGIARGIGYLHTELAHLD--LPHGNLKSSNIFISPENEPLISEFGFYTMINSANL- 471
+I G ARG+ YLH H D + H ++K++NI + E E ++ +FG +++ +
Sbjct: 142 QRIALGSARGLAYLHD---HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 472 ----AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVV 525
+ + APE + +GK + K DV+ G+++LE++TG+ F L N + + ++
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN-DDDVMLL 257
Query: 526 EWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVR 581
+WV E ++ L+D ++ + E+EQL+++ CTQS P +R +M E VR
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQSSPMERPKMSEVVR 312
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 22/202 (10%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKE----SSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+G GG G YK + + TV VK++ ++ + FD E++ + + +H N++ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D+ LVY Y+P GSLL L G L+W R KI QG A GI +LH E H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--PLSWHMRCKIAQGAANGINFLH-ENHH 154
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALF--------AYKAPEAIQS 486
+ H ++KS+NI + IS+FG S AQ + AY APEA++
Sbjct: 155 I---HRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXXRIVGTTAYMAPEALR- 208
Query: 487 GKVTPKCDVYCLGIIILEILTG 508
G++TPK D+Y G+++LEI+TG
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 22/202 (10%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKE----SSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+G GG G YK + + TV VK++ ++ + FD E++ + + +H N++ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D+ LVY Y+P GSLL L G L+W R KI QG A GI +LH E H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--PLSWHMRCKIAQGAANGINFLH-ENHH 154
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALF--------AYKAPEAIQS 486
+ H ++KS+NI + IS+FG S AQ + AY APEA++
Sbjct: 155 I---HRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXSRIVGTTAYMAPEALR- 208
Query: 487 GKVTPKCDVYCLGIIILEILTG 508
G++TPK D+Y G+++LEI+TG
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 22/202 (10%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKE----SSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+G GG G YK + + TV VK++ ++ + FD E++ + + +H N++ L
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D+ LVY Y+P GSLL L G L+W R KI QG A GI +LH E H
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--PLSWHMRCKIAQGAANGINFLH-ENHH 148
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALF--------AYKAPEAIQS 486
+ H ++KS+NI + IS+FG S AQ + AY APEA++
Sbjct: 149 I---HRDIKSANILLDEAFTAKISDFGLARA--SEKFAQXVMXXRIVGTTAYMAPEALR- 202
Query: 487 GKVTPKCDVYCLGIIILEILTG 508
G++TPK D+Y G+++LEI+TG
Sbjct: 203 GEITPKSDIYSFGVVLLEIITG 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 25/278 (8%)
Query: 318 VLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
++G+G G YK ++ DG V +KR S+ + F+TE+ L RH ++++ + +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
+E +L+Y+Y+ G+L L+G P+ ++W RL+I G ARG+ YLHT +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLHTRA----I 160
Query: 438 PHGNLKSSNIFISPENEPLISEFGFY---TMINSANL---AQALFAYKAPEAIQSGKVTP 491
H ++KS NI + P I++FG T ++ +L + Y PE G++T
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 492 KCDVYCLGIIILEILTGK------FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEI 545
K DVY G+++ E+L + P + +++ EW + + G++ ++DP +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREM-------VNLAEWAVESHNNGQLEQIVDPNL 273
Query: 546 ASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRI 583
A P + + + C E R M + + ++
Sbjct: 274 ADKIR-PESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 318 VLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
++G+G G YK ++ DG V +KR S+ + F+TE+ L RH ++++ + +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
+E +L+Y+Y+ G+L L+G P+ ++W RL+I G ARG+ YLHT +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGLHYLHTRA----I 160
Query: 438 PHGNLKSSNIFISPENEPLISEFGFY---TMINSANL---AQALFAYKAPEAIQSGKVTP 491
H ++KS NI + P I++FG T + +L + Y PE G++T
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 492 KCDVYCLGIIILEILTGK------FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEI 545
K DVY G+++ E+L + P + +++ EW + + G++ ++DP +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREM-------VNLAEWAVESHNNGQLEQIVDPNL 273
Query: 546 ASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRI 583
A P + + + C E R M + + ++
Sbjct: 274 ADKIR-PESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 320 GNGGLGSSYKAMMADGVTVVVKRMKE----SSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
G GG G YK + + TV VK++ ++ + FD E++ + +H N++ L +
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
D+ LVY Y P GSLL L G L+W R KI QG A GI +LH E H+
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTP--PLSWHXRCKIAQGAANGINFLH-ENHHI 146
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALF--------AYKAPEAIQSG 487
H ++KS+NI + IS+FG S AQ + AY APEA++ G
Sbjct: 147 ---HRDIKSANILLDEAFTAKISDFGLARA--SEKFAQXVXXSRIVGTTAYXAPEALR-G 200
Query: 488 KVTPKCDVYCLGIIILEILTG 508
++TPK D+Y G+++LEI+TG
Sbjct: 201 EITPKSDIYSFGVVLLEIITG 221
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 30/264 (11%)
Query: 306 FGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR 365
+ +PD + +G+G G+ YK V V + + + AF EV L + R
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 366 HSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGI 425
H N+L + Y + + +V ++ G SL + LH S + + I + ARG+
Sbjct: 67 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGM 121
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYK 479
YLH + + H +LKS+NIF+ +N I +FG T+ + + + +
Sbjct: 122 DYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 480 APEAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGR 536
APE I+ P + DVY GI++ E++TG+ P + N + I++V GR
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---------GR 228
Query: 537 VTDLLDPEIAS-STNSPGEMEQLL 559
+ L P+++ +N P M++L+
Sbjct: 229 GS--LSPDLSKVRSNCPKRMKRLM 250
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH S + + I + ARG+ Y
Sbjct: 81 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDY 135
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ +N I +FG T + + + + AP
Sbjct: 136 LHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I++V GR +
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---------GRGS 242
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 243 --LSPDLSKVRSNCPKRMKRLMA---ECLKKKRDER 273
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 368 NVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
N+L L Y T +L +V ++ G SL + LH S + + I + ARG+
Sbjct: 81 NIL--LFMGYSTAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMD 134
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKA 480
YLH + + H +LKS+NIF+ +N I +FG T + + + + A
Sbjct: 135 YLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 481 PEAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRV 537
PE I+ P + DVY GI++ E++TG+ P + N + I++V GR
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV---------GRG 241
Query: 538 TDLLDPEIAS-STNSPGEMEQLL 559
+ L P+++ +N P M++L+
Sbjct: 242 S--LSPDLSKVRSNCPKRMKRLM 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 119/270 (44%), Gaps = 37/270 (13%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMK--ESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E++G GG G Y+A + D V V R E + + E + L+H N++A
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 374 AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
+ LV E+ GG L +L G R P + W + IARG+ YLH E A
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDE-A 125
Query: 434 HLDLPHGNLKSSNIFI--SPENEPL------ISEFGFYTMINSANLAQAL--FAYKAPEA 483
+ + H +LKSSNI I EN L I++FG + A +A+ APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 484 IQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDP 543
I++ + DV+ G+++ E+LTG+ P + GID A + G + L
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFR-------GID-----GLAVAYGVAMNKLAL 233
Query: 544 EIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
I S+ P +L+E C DP R
Sbjct: 234 PIPSTCPEP--FAKLME---DCWNPDPHSR 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 70
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 124
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H NL+++NI +S I++FG +I A+ + APEAI G
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 229
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 230 -NCPEELYQLM---RLCWKERPEDR 250
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 35/264 (13%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LYA 75
Query: 377 YRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVT 490
+ H +L+++NI +S I++FG +I A A+ + APEAI G T
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 491 PKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASST 549
K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD----- 233
Query: 550 NSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 234 NCPEELYQLM---RLCWKERPEDR 254
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 69
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 123
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 228
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 229 -NCPEELYQLM---RLCWKERPEDR 249
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 80
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 134
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 239
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 240 -NCPEELYQLM---RLCWKERPEDR 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 74
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 233
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 234 -NCPEELYQLM---RLCWKERPEDR 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 79
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 133
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 134 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 238
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 239 -NCPEELYQLM---RLCWKERPEDR 259
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 76
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 131 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 235
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 236 -NCPEELYQLM---RLCWKERPEDR 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 74
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 233
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 234 -NCPEELYQLM---RLCWKERPEDR 254
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 75
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 129
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 130 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 234
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 235 -NCPEELYQLM---RLCWKERPEDR 255
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 83
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 137
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + +
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGY-----------RMVRP 241
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 242 DNCPEELYQLM---RLCWKERPEDR 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 82
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 136
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 137 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + ++ P+
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD---- 241
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 242 -NCPEELYQLM---RLCWKERPEDR 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 74
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + +
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGY-----------RMVRP 232
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 233 DNCPEELYQLM---RLCWKERPEDR 254
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 80
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 134
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + +
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGY-----------RMVRP 238
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 239 DNCPEELYQLM---RLCWKERPEDR 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G + V VK +K+ S M+ DAF E + +L+H ++ Y
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR--LY 84
Query: 376 HYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
T E + ++ EY+ GSL+ L + PS +LT L + IA G+ ++
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 138
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKV 489
+ H +L+++NI +S I++FG +I A+ + APEAI G
Sbjct: 139 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 490 TPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
T K DV+ GI++ EI+T G+ P +TN +V++ + + +
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGY-----------RMVRP 242
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
N P E+ QL+ R C + PE R
Sbjct: 243 DNCPEELYQLM---RLCWKERPEDR 264
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + + V VK +K + M+ AF E + L+H ++ A R
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
+ ++ EY+ GSLL L D G ++ P + IA G+ Y+ + +
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIERK----NYI 132
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPKC 493
H +L+++N+ +S I++FG +I A+ + APEAI G T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ GI++ EI+T GK P TN + V +A S+G + N P
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNAD--------VMTALSQGY-------RMPRVENCP 237
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
E L +I + C + E+R
Sbjct: 238 DE---LYDIMKMCWKEKAEER 255
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 33 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH + + I + A+G+ Y
Sbjct: 93 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDY 147
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ + I +FG T+ + + + + AP
Sbjct: 148 LHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR-- 252
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 253 GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 285
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 32 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 91
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH + + I + A+G+ Y
Sbjct: 92 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDY 146
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ + I +FG T+ + + + + AP
Sbjct: 147 LHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR-- 251
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 252 GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 284
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 35/277 (12%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 368 NVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
N+L L Y T +L +V ++ G SL + LH + + I + A+G+
Sbjct: 65 NIL--LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMD 118
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKA 480
YLH + + H +LKS+NIF+ + I +FG T+ + + + + A
Sbjct: 119 YLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 481 PEAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRV 537
PE I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR- 224
Query: 538 TDLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 225 -GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 257
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 35/277 (12%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 10 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 368 NVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
N+L L Y T +L +V ++ G SL + LH + + I + A+G+
Sbjct: 70 NIL--LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMD 123
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKA 480
YLH + + H +LKS+NIF+ + I +FG T+ + + + + A
Sbjct: 124 YLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 481 PEAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRV 537
PE I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR- 229
Query: 538 TDLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 230 -GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 262
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 10 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH + + I + A+G+ Y
Sbjct: 70 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDY 124
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ + I +FG T+ + + + + AP
Sbjct: 125 LHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR-- 229
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 230 GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 262
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 35/277 (12%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 7 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 66
Query: 368 NVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
N+L L Y T +L +V ++ G SL + LH + + I + A+G+
Sbjct: 67 NIL--LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMD 120
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKA 480
YLH + + H +LKS+NIF+ + I +FG T+ + + + + A
Sbjct: 121 YLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 481 PEAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRV 537
PE I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR- 226
Query: 538 TDLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 227 -GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 259
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 35/277 (12%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 368 NVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
N+L L Y T +L +V ++ G SL + LH + + I + A+G+
Sbjct: 65 NIL--LFMGYSTAPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMD 118
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKA 480
YLH + + H +LKS+NIF+ + I +FG T+ + + + + A
Sbjct: 119 YLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 481 PEAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRV 537
PE I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR- 224
Query: 538 TDLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 225 -GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 120/276 (43%), Gaps = 30/276 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
EV+G G G KA V +K+++ S R AF E+R+L R+ H N++ Y
Sbjct: 15 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVK--LYG 69
Query: 377 YRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
+ LV EY GGSL +LHG + T + ++G+ YLH+ +
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLHGAEPLPY--YTAAHAMSWCLQCSQGVAYLHS-MQPKA 126
Query: 437 LPHGNLKSSNIFISPENEPL-ISEFGFYTMINSA---NLAQALFAYKAPEAIQSGKVTPK 492
L H +LK N+ + L I +FG I + N A A+ APE + + K
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA--AWMAPEVFEGSNYSEK 184
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
CDV+ GII+ E++T + P + G + W A G L+ N P
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEI---GGPAFRIMW---AVHNGTRPPLIK-------NLP 231
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+E L+ C DP QR M E V+ + + +
Sbjct: 232 KPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 33 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH + + I + A+G+ Y
Sbjct: 93 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDY 147
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ + I +FG T + + + + AP
Sbjct: 148 LHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR-- 252
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 253 GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 285
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 25 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH + + I + A+G+ Y
Sbjct: 85 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDY 139
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ + I +FG T + + + + AP
Sbjct: 140 LHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR-- 244
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 245 GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 277
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 120/276 (43%), Gaps = 30/276 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
EV+G G G KA V +K+++ S R AF E+R+L R+ H N++ Y
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVK--LYG 68
Query: 377 YRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
+ LV EY GGSL +LHG + T + ++G+ YLH+ +
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLHGAEPLPY--YTAAHAMSWCLQCSQGVAYLHS-MQPKA 125
Query: 437 LPHGNLKSSNIFISPENEPL-ISEFGFYTMINSA---NLAQALFAYKAPEAIQSGKVTPK 492
L H +LK N+ + L I +FG I + N A A+ APE + + K
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA--AWMAPEVFEGSNYSEK 183
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
CDV+ GII+ E++T + P + G + W A G L+ N P
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEI---GGPAFRIMW---AVHNGTRPPLIK-------NLP 230
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+E L+ C DP QR M E V+ + + +
Sbjct: 231 KPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
+PD + +G+G G+ YK V V + + + AF EV L + RH
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
N+L + Y + + +V ++ G SL + LH + + I + A+G+ Y
Sbjct: 65 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDY 119
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAP 481
LH + + H +LKS+NIF+ + I +FG T + + + + AP
Sbjct: 120 LHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
Query: 482 EAIQSGKVTP---KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
E I+ P + DVY GI++ E++TG+ P + N + I F GR
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---------FMVGR-- 224
Query: 539 DLLDPEIAS-STNSPGEMEQLLEIGRACTQSDPEQR 573
L P+++ +N P M++L+ C + ++R
Sbjct: 225 GYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDER 257
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G+ YK V V + ++ + + AF EV L + RH N+L + Y +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
D +V ++ G SL LH + + I + A+G+ YLH + ++
Sbjct: 104 -DNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLHAK----NII 154
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTP- 491
H ++KS+NIF+ I +FG T+ + + +Q + + APE I+ P
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 492 --KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASST 549
+ DVY GI++ E++TG+ P ++ N + ++ V ++ ++ L
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMVGRGYASPDLSKLYK------- 264
Query: 550 NSPGEMEQLLEIGRACTQSDPEQR 573
N P M++L+ C + E+R
Sbjct: 265 NCPKAMKRLVA---DCVKKVKEER 285
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 45/235 (19%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E++G+GG G +KA DG T V+KR+K ++ A + EV+ L +L H N++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIV----- 67
Query: 376 HY-------------------RTDEKLLV--YEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
HY R+ K L E+ G+L + RG D++
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV---LA 124
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS---ANL 471
L++ + I +G+ Y+H++ L + +LK SNIF+ + I +FG T + +
Sbjct: 125 LELFEQITKGVDYIHSK----KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR 180
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEIL----TGKFPSQYLTNGNGGI 522
++ Y +PE I S + D+Y LG+I+ E+L T S++ T+ GI
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI 235
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + + V VK +K + M+ AF E + L+H ++ A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
+ ++ E++ GSLL L D G ++ P + IA G+ Y+ + +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIERK----NYI 131
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPKC 493
H +L+++N+ +S I++FG +I A+ + APEAI G T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+V+ GI++ EI+T GK P TN + V SA S+G + N P
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNAD--------VMSALSQGY-------RMPRMENCP 236
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
E L +I + C + E+R
Sbjct: 237 DE---LYDIMKMCWKEKAEER 254
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMAR--DAFDTEVRRLGRLRHSNVLAPLA 374
E +G G G+ ++A G V VK + E A + F EV + RLRH N++ +
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ +V EY+ GSL LLH + + ++L RL + +A+G+ YLH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR--N 157
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H NLKS N+ + + + +FG + S L+ A + APE ++
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 491 PKCDVYCLGIIILEILTGKFP 511
K DVY G+I+ E+ T + P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 112/276 (40%), Gaps = 43/276 (15%)
Query: 319 LGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
LG G G + A D + V VK +K++S AR F E L L+H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLL--HGD------RGPSHDELTWPARLKIVQGIARG 424
D ++V+EY+ G L L HG G ELT L I Q IA G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 425 IGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAY 478
+ YL ++ H +L + N + I +FG + S + + +
Sbjct: 141 MVYLASQ----HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 479 KAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRV 537
PE+I K T + DV+ LG+++ EI T GK P L+N V ++GRV
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--------VIECITQGRV 248
Query: 538 TDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
+ P E+ +L+ C Q +P R
Sbjct: 249 -------LQRPRTCPQEVYELM---LGCWQREPHMR 274
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRL 361
+K + +P + LG G G + A V VK MK S M+ +AF E +
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVM 64
Query: 362 GRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGI 421
L+H L L + ++ E++ GSLL L D G S L P + I
Sbjct: 65 KTLQHDK-LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQI 120
Query: 422 ARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALF 476
A G+ ++ + H +L+++NI +S I++FG +I A+
Sbjct: 121 AEGMAFIEQR----NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEG 535
+ APEAI G T K DV+ GI+++EI+T G+ P ++N V A G
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--------VIRALERG 228
Query: 536 RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
+ PE N P E+L I C ++ PE+R
Sbjct: 229 --YRMPRPE-----NCP---EELYNIMMRCWKNRPEER 256
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 58/248 (23%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E++G+GG G +KA DG T V++R+K ++ A + EV+ L +L H N++
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIV----- 68
Query: 376 HY--------------------------------RTDEKLLV--YEYIPGGSLLYLLHGD 401
HY R+ K L E+ G+L +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 402 RGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG 461
RG D++ L++ + I +G+ Y+H++ L H +LK SNIF+ + I +FG
Sbjct: 129 RGEKLDKV---LALELFEQITKGVDYIHSK----KLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 462 FYTMINS---ANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEIL----TGKFPSQY 514
T + + ++ Y +PE I S + D+Y LG+I+ E+L T S++
Sbjct: 182 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF 241
Query: 515 LTNGNGGI 522
T+ GI
Sbjct: 242 FTDLRDGI 249
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRL 361
+K + +P + LG G G + A V VK MK S M+ +AF E +
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVM 237
Query: 362 GRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGI 421
L+H L L + ++ E++ GSLL L D G P + I
Sbjct: 238 KTLQHDK-LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ---PLPKLIDFSAQI 293
Query: 422 ARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALF 476
A G+ ++ + H +L+++NI +S I++FG +I A+
Sbjct: 294 AEGMAFIEQR----NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEG 535
+ APEAI G T K DV+ GI+++EI+T G+ P ++N +V+ + +
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALERGYRMP 405
Query: 536 RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
R PE N P E+L I C ++ PE+R
Sbjct: 406 R------PE-----NCP---EELYNIMMRCWKNRPEER 429
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMAR--DAFDTEVRRLGRLRHSNVLAPLA 374
E +G G G+ ++A G V VK + E A + F EV + RLRH N++ +
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ +V EY+ GSL LLH + + ++L RL + +A+G+ YLH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR--N 157
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LKS N+ + + + +FG + S L A + APE ++
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 491 PKCDVYCLGIIILEILTGKFP 511
K DVY G+I+ E+ T + P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 46/287 (16%)
Query: 319 LGNGGLGSSYKAM------MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
LG G G + A D + V VK +K+ + AR F E L L+H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 373 LAYHYRTDEKLLVYEYIPGGSL-----------LYLLHGDRGPSHDELTWPARLKIVQGI 421
D ++V+EY+ G L + L+ G + EL L I I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 422 ARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------L 475
A G+ YL ++ H +L + N + I +FG + S + +
Sbjct: 143 ASGMVYLASQ----HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 476 FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSE 534
+ PE+I K T + DV+ G+I+ EI T GK P L+N +V+E ++
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN----TEVIE----CITQ 250
Query: 535 GRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVR 581
GRV L P + +++ ++ C Q +P+QRL ++E +
Sbjct: 251 GRV--LERPRVCP--------KEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 39/284 (13%)
Query: 319 LGNGGLGSSYKA-MMADGVTVVVKRM------KESSAMAR-DAFDTEVRRLGRLRHSNVL 370
+G GG G +K ++ D V +K + E+ + + F EV + L H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + +V E++P G L + L P + W +L+++ IA GI Y+
Sbjct: 87 K--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGIEYMQN 140
Query: 431 ELAHLDLPHGNLKSSNIFISP--ENEPL---ISEFGFYTM-INSANLAQALFAYKAPEAI 484
+ + + H +L+S NIF+ EN P+ +++FG ++S + F + APE I
Sbjct: 141 Q--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 485 --QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+ T K D Y +I+ ILTG+ P + G ++++ EG L
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIREEG-----LR 248
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
P I + P + ++E+ C DP++R V+ + E+
Sbjct: 249 PTIPE--DCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 39/284 (13%)
Query: 319 LGNGGLGSSYKA-MMADGVTVVVKRM------KESSAMAR-DAFDTEVRRLGRLRHSNVL 370
+G GG G +K ++ D V +K + E+ + + F EV + L H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + +V E++P G L + L P + W +L+++ IA GI Y+
Sbjct: 87 K--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGIEYMQN 140
Query: 431 ELAHLDLPHGNLKSSNIFISP--ENEPLISEFGFYTM----INSANLAQALFAYKAPEAI 484
+ + + H +L+S NIF+ EN P+ ++ +++ ++S + F + APE I
Sbjct: 141 Q--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 485 --QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+ T K D Y +I+ ILTG+ P + G ++++ EG L
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIREEG-----LR 248
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
P I + P + ++E+ C DP++R V+ + E+
Sbjct: 249 PTIPE--DCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRL 361
+K + +P + LG G G + A V VK MK S M+ +AF E +
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVM 231
Query: 362 GRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGI 421
L+H L L + ++ E++ GSLL L D G S L P + I
Sbjct: 232 KTLQHDK-LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEG-SKQPL--PKLIDFSAQI 287
Query: 422 ARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAP 481
A G+ ++ + H +L+++NI +S I++FG + A+ + AP
Sbjct: 288 AEGMAFIEQR----NYIHRDLRAANILVSASLVCKIADFGLARV-----GAKFPIKWTAP 338
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
EAI G T K DV+ GI+++EI+T G+ P ++N +V+ + + R
Sbjct: 339 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALERGYRMPR---- 390
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
PE N P E+L I C ++ PE+R
Sbjct: 391 --PE-----NCP---EELYNIMMRCWKNRPEER 413
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 319 LGNGGLGSSYKA-MMADGVTVVVKRM------KESSAMAR-DAFDTEVRRLGRLRHSNVL 370
+G GG G +K ++ D V +K + E+ + + F EV + L H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + +V E++P G L + L P + W +L+++ IA GI Y+
Sbjct: 87 K--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGIEYMQN 140
Query: 431 ELAHLDLPHGNLKSSNIFISP--ENEPLISEFG-FYTMINSANLAQAL---FAYKAPEAI 484
+ + + H +L+S NIF+ EN P+ ++ F T S + L F + APE I
Sbjct: 141 Q--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETI 198
Query: 485 --QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+ T K D Y +I+ ILTG+ P + G ++++ EG L
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIREEG-----LR 248
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
P I + P + ++E+ C DP++R V+ + E+
Sbjct: 249 PTIPE--DCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 305 VFGLPDLMKAAAEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGR 363
+F DL+ EVLG G G + K + G +V+K + + F EV+ +
Sbjct: 6 IFRPSDLIHG--EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 364 LRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIAR 423
L H NVL + Y+ + EYI GG+L ++ + W R+ + IA
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIAS 119
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSANLAQALFAYK--- 479
G+ YLH+ +++ H +L S N + ++++FG M++ + L + K
Sbjct: 120 GMAYLHS----MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 480 --------------APEAIQSGKVTPKCDVYCLGIIILEIL 506
APE I K DV+ GI++ EI+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 73
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 126
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYR-----------MPCPPEC 231
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 232 P---ESLHDLMCQCWRKDPEER 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 71
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 124
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYR-----------MPCPPEC 229
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 230 P---ESLHDLMCQCWRKDPEER 248
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 72
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 125
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVN 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 331
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 384
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPGMVN 470
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 75
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 128
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVN 214
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 248
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 301
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 248
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 301
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 35/278 (12%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLG 362
K V+ +P + LGNG G + V +K +K + M+ ++F E + +
Sbjct: 1 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMK 59
Query: 363 RLRHSNVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGI 421
+L+H ++ Y ++E + +V EY+ GSLL L G + L P + + +
Sbjct: 60 KLKHDKLVQ--LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQV 114
Query: 422 ARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALF 476
A G+ Y+ ++ H +L+S+NI + I++FG +I A+
Sbjct: 115 AAGMAYIE----RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEG 535
+ APEA G+ T K DV+ GI++ E++T G+ P + N +V+E V +
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR----EVLEQVERGY--- 223
Query: 536 RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
+ + P + +L+ C + DPE+R
Sbjct: 224 --------RMPCPQDCPISLHELM---IHCWKKDPEER 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 319 LGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
LG G G + A D + V VK +KE+S AR F E L L+H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPS-------HDELTWPARLKIVQGIARGI 425
L+V+EY+ G L L GP D P L + +A +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
LA L H +L + N + I +FG I S + + +
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 227
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PE+I K T + DV+ G+++ EI T GK P L+N ID + ++GR
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCI-------TQGR-- 277
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
E+ P E+ ++ R C Q +P+QR +++ R+ + Q+
Sbjct: 278 -----ELERPRACPPEVYAIM---RGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 319 LGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
LG G G + A D + V VK +KE+S AR F E L L+H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPS-------HDELTWPARLKIVQGIARGI 425
L+V+EY+ G L L GP D P L + +A +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
LA L H +L + N + I +FG I S + + +
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 198
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PE+I K T + DV+ G+++ EI T GK P L+N ID + ++GR
Sbjct: 199 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCI-------TQGR-- 248
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
E+ P E+ ++ R C Q +P+QR +++ R+ + Q+
Sbjct: 249 -----ELERPRACPPEVYAIM---RGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 319 LGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
LG G G + A D + V VK +KE+S AR F E L L+H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPS-------HDELTWPARLKIVQGIARGI 425
L+V+EY+ G L L GP D P L + +A +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
LA L H +L + N + I +FG I S + + +
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 204
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PE+I K T + DV+ G+++ EI T GK P L+N ID + ++GR
Sbjct: 205 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCI-------TQGR-- 254
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
E+ P E+ ++ R C Q +P+QR +++ R+ + Q+
Sbjct: 255 -----ELERPRACPPEVYAIM---RGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + ++RH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 79
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVE----RMNY 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ G LL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYR-----------MPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 248
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 301
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L ++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 79
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVE----RMNY 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTN 517
DV+ GI++ E+ T G+ P + N
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 82
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ G LL L G+ G L P + + IA G+ Y+ ++
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 135
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 240
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 241 P---ESLHDLMCQCWRKDPEER 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G + V +K +K + M+ +AF E + + +LRH ++ Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQ--LYAVV 249
Query: 379 TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
++E + +V EY+ GSLL L G+ G L P + + IA G+ Y+ ++
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE----RMNY 302
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L+++NI + +++FG +I A+ + APEA G+ T K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ T G+ P + N +V++ V + +
Sbjct: 363 SDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGY-----------RMPCPPEC 407
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
P E L ++ C + DPE+R
Sbjct: 408 P---ESLHDLMCQCWRKDPEER 426
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E +G G G+ Y AM +A G V +++M ++ E+ + ++ N++ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
+ DE +V EY+ GGSL ++ DE A + + + + +LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAA---VCRECLQALEFLHSN---- 136
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
+ H N+KS NI + + +++FGF I ++ + APE + P
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 492 KCDVYCLGIIILEILTGKFP 511
K D++ LGI+ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 44/231 (19%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTE--VRRLGRLRHSNVLAPLA 374
E++G G G+ YK + D V VK S R F E + R+ + H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 375 YHYRTD-----EKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
R E LLV EY P GSL L S W + ++ + RG+ YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 430 TELAHLD-----LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ----------- 473
TEL D + H +L S N+ + + +IS+FG + L +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 474 -ALFAYKAPEAIQSG-------KVTPKCDVYCLGIIILEIL---TGKFPSQ 513
Y APE ++ + D+Y LG+I EI T FP +
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 35/281 (12%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG+G G V VK +KE S M+ D F E + + +L H ++ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 379 TDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
+V EYI G LL YL +G +L L++ + G+ +L +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLESH----QF 125
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAPEAIQSGKVTPK 492
H +L + N + + +S+FG + ++ + APE K + K
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 493 CDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
DV+ GI++ E+ + GK P TN V S+G L P +AS T
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYTNSE--------VVLKVSQGH--RLYRPHLASDT-- 233
Query: 552 PGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSDGN 592
+ +I +C PE+R ++ + I +++ D +
Sbjct: 234 ------IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E +G G G+ Y AM +A G V +++M ++ E+ + ++ N++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
+ DE +V EY+ GGSL ++ DE A + + + + +LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAA---VCRECLQALEFLHSN---- 135
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
+ H ++KS NI + + +++FGF I ++ + APE + P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 492 KCDVYCLGIIILEILTGKFP 511
K D++ LGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E +G G G+ Y AM +A G V +++M ++ E+ + ++ N++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
+ DE +V EY+ GGSL ++ DE A + + + + +LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAA---VCRECLQALEFLHSN---- 135
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
+ H ++KS NI + + +++FGF I ++ + APE + P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 492 KCDVYCLGIIILEILTGKFP 511
K D++ LGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 16/222 (7%)
Query: 297 VLVNGQKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKE--SSAMARDAF 354
V V G + P+ + E +G G G +K + VV ++ + + +
Sbjct: 9 VQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDI 68
Query: 355 DTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
E+ L + S V + + + ++ EY+ GGS L LL GP DE
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA--GP-FDEFQIATM 125
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA 474
LK I +G+ YLH+E H ++K++N+ +S + + +++FG + + +
Sbjct: 126 LK---EILKGLDYLHSEKK----IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 178
Query: 475 LFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPS 512
F + APE IQ K D++ LGI +E+ G+ P+
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 33/277 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G + + V +K +KE S M+ D F E + +L H ++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
LV+E++ G L L RG E L + + G+ YL +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 145
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N + +S+FG + S+ + + +PE + + K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ E+ + GK P + +N +VVE +++ F L P +AS+
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFR------LYKPRLAST---- 251
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
+ +I C + PE R +R++ EI +S
Sbjct: 252 ----HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 107/265 (40%), Gaps = 32/265 (12%)
Query: 318 VLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
VLG G G Y +++ V + +K + E + E+ L+H N++ L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 377 YRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-ELTWPARLKIVQGIARGIGYLHTELAHL 435
+ E +PGGSL LL GP D E T K I G+ YLH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK---QILEGLKYLHDN---- 127
Query: 436 DLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA----YKAPEAIQSGK-- 488
+ H ++K N+ I+ + L IS+FG + N F Y APE I G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 489 VTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
D++ LG I+E+ TGK P L E A+ F G + PEI S
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELG---------EPQAAMFKVGMFK--VHPEIPES 236
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
++ + L C + DP++R
Sbjct: 237 MSAEAKAFIL-----KCFEPDPDKR 256
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E +G G G+ Y AM +A G V +++M ++ E+ + ++ N++ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
+ DE +V EY+ GGSL ++ DE A + + + + +LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAA---VCRECLQALEFLHSN---- 136
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
+ H ++KS NI + + +++FGF I ++ + APE + P
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 492 KCDVYCLGIIILEILTGKFP 511
K D++ LGI+ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 107/265 (40%), Gaps = 32/265 (12%)
Query: 318 VLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
VLG G G Y +++ V + +K + E + E+ L+H N++ L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 377 YRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-ELTWPARLKIVQGIARGIGYLHTELAHL 435
+ E +PGGSL LL GP D E T K I G+ YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK---QILEGLKYLHDN---- 141
Query: 436 DLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA----YKAPEAIQSGK-- 488
+ H ++K N+ I+ + L IS+FG + N F Y APE I G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 489 VTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
D++ LG I+E+ TGK P L E A+ F G + PEI S
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELG---------EPQAAMFKVGMFK--VHPEIPES 250
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQR 573
++ + L C + DP++R
Sbjct: 251 MSAEAKAFIL-----KCFEPDPDKR 270
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 38/185 (20%)
Query: 16 NAKALDSWMPSTAPCRGGEEEWSGVVCLKGIVTGLYINSMGLSGK--------------- 60
N L SW+P+T C W GV+C T +N++ LSG
Sbjct: 20 NPTTLSSWLPTTDCC---NRTWLGVLCDTDTQT-YRVNNLDLSGLNLPKPYPIPSSLANL 75
Query: 61 -----IDVDALTELTG--------LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSN 107
+ + + L G L L +Y+ SG I P + ++ L L FS
Sbjct: 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI-PDFLSQIKTLVTLDFSY 134
Query: 108 NKFRGRLPPSLFKLPHLTELHLESNQFNGTIP----SFDQPTLVRLNLSSNKLEGEIPAS 163
N G LPPS+ LP+L + + N+ +G IP SF + + +S N+L G+IP +
Sbjct: 135 NALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK-LFTSMTISRNRLTGKIPPT 193
Query: 164 LLRFN 168
N
Sbjct: 194 FANLN 198
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 26/113 (23%)
Query: 73 RGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLESN 132
+ + I+L KN + ++ G L L NN+ G LP L +L L
Sbjct: 221 KNTQKIHLAKNSLAFDL--GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS------ 272
Query: 133 QFNGTIPSFDQPTLVRLNLSSNKLEGEIP--ASLLRFNASSFSGNAGLCGKNL 183
LN+S N L GEIP +L RF+ S+++ N LCG L
Sbjct: 273 ----------------LNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E +G G G+ Y AM +A G V +++M ++ E+ + ++ N++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
+ DE +V EY+ GGSL ++ DE A + + + + +LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAA---VCRECLQALEFLHSN---- 135
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
+ H ++KS NI + + +++FGF I ++ + APE + P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 492 KCDVYCLGIIILEILTGKFP 511
K D++ LGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 309 PDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFD---TEVRRLGRL 364
P+ + + +G+G G+ Y A + + V +K+M S + + + EVR L +L
Sbjct: 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 111
Query: 365 RHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-ELTWPARLKIVQGIAR 423
RH N + + R LV EY GS LL + P + E+ + G +
Sbjct: 112 RHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA-----AVTHGALQ 165
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPE- 482
G+ YLH+ ++ H ++K+ NI +S + +FG +++ AN + APE
Sbjct: 166 GLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEV 221
Query: 483 --AIQSGKVTPKCDVYCLGIIILEILTGKFP 511
A+ G+ K DV+ LGI +E+ K P
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 309 PDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFD---TEVRRLGRL 364
P+ + + +G+G G+ Y A + + V +K+M S + + + EVR L +L
Sbjct: 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 72
Query: 365 RHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-ELTWPARLKIVQGIAR 423
RH N + + R LV EY GS LL + P + E+ + G +
Sbjct: 73 RHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA-----AVTHGALQ 126
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPE- 482
G+ YLH+ ++ H ++K+ NI +S + +FG +++ AN + APE
Sbjct: 127 GLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEV 182
Query: 483 --AIQSGKVTPKCDVYCLGIIILEILTGKFP 511
A+ G+ K DV+ LGI +E+ K P
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 317 EVLGNGGLGSSYKAMMADG-----VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVL 370
+V+G G G YK M+ V V +K +K + R F E +G+ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
+ +++ EY+ G+L L G E + + +++GIA G+ YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYL-- 163
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-------SANLAQALFAYKAPEA 483
A+++ H +L + NI ++ +S+FG ++ + + + + APEA
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 484 IQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTN 517
I K T DV+ GI++ E++T G+ P L+N
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 378 RTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
R ++ E++ G+LL YL +R E++ L + I+ + YL + +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK----N 338
Query: 437 LPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTP 491
H NL + N + + +++FG ++ A+ + APE++ K +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 492 KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
K DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 399 KSDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RP 441
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 442 EGCPEKVYELMRACWQWNPSDR 463
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 133
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPEA 483
+ H NL + NI + EN I +FG ++ ++ + APE+
Sbjct: 134 K----RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ K + DV+ G+++ E+ T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 33/262 (12%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 378 RTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
R ++ E++ G+LL YL +R E+ L + I+ + YL + +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK----N 377
Query: 437 LPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTP 491
H NL + N + + +++FG ++ A+ + APE++ K +
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 492 KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
K DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 438 KSDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RP 480
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 481 EGCPEKVYELMRACWQWNPSDR 502
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 33/262 (12%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 378 RTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
R ++ E++ G+LL YL +R E+ L + I+ + YL + +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK----N 335
Query: 437 LPHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTP 491
H NL + N + + +++FG ++ A+ + APE++ K +
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 492 KCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNS 551
K DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 396 KSDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RP 438
Query: 552 PGEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 439 EGCPEKVYELMRACWQWNPSDR 460
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 319 LGNGGLGSSYKA-------MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
LG GG+ + Y A +A + R KE + + R F+ EV +L H N+++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEET-LKR--FEREVHNSSQLSHQNIVS 75
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ D LV EYI G +L + SH L+ + I GI + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTL-----SEYIESHGPLSVDTAINFTNQILDGIKHAHD- 129
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-----LFAYKAPEAIQS 486
+ + H ++K NI I I +FG ++ +L Q Y +PE +
Sbjct: 130 ---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK- 185
Query: 487 GKVTPKC-DVYCLGIIILEILTGKFP 511
G+ T +C D+Y +GI++ E+L G+ P
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 235
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 235
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 235
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 235
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 137
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 240
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 241 GCPEKVYELMRACWQWNPSDR 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 78 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 130
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID +V +LL+ +
Sbjct: 191 SDVWAFGVLLWEIAT------YGMSPYPGID----------PSQVYELLEKDYRME-RPE 233
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 234 GCPEKVYELMRACWQWNPSDR 254
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 134
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 237
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 238 GCPEKVYELMRACWQWNPSDR 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 81 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 133
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 194 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 236
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 237 GCPEKVYELMRACWQWNPSDR 257
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 78 REPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 130
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID +V +LL+ +
Sbjct: 191 SDVWAFGVLLWEIAT------YGMSPYPGID----------PSQVYELLEKDYRME-RPE 233
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 234 GCPEKVYELMRACWQWNPSDR 254
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 133
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 194 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 236
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 237 GCPEKVYELMRACWQWNPSDR 257
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 137
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 138 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 192
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 240
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 241 GCPEKVYELMRACWQWNPSDR 261
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 134
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 237
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 238 GCPEKVYELMRACWQWNPSDR 258
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 134
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 237
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 238 GCPEKVYELMRACWQWNPSDR 258
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 240
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 241 GCPEKVYELMRACWQWNPSDR 261
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 235
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 139
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPEA 483
+ H +L + NI + EN I +FG ++ ++ + APE+
Sbjct: 140 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ K + DV+ G+++ E+ T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 135
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 136 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 240
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 241 GCPEKVYELMRACWQWNPSDR 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 84 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 136
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 197 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 239
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 240 GCPEKVYELMRACWQWNPSDR 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 33/277 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G + + V +K ++E AM+ + F E + +L H ++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
LV+E++ G L L RG E L + + G+ YL +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 128
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N + +S+FG + S+ + + +PE + + K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ E+ + GK P + +N +VVE +++ F L P +AS+
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFR------LYKPRLAST---- 234
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
+ +I C + PE R +R++ EI +S
Sbjct: 235 ----HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 93 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 145
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 206 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 248
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 249 GCPEKVYELMRACWQWNPSDR 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 130
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 131 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 185
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 33/277 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G + + V +K ++E AM+ + F E + +L H ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
LV+E++ G L L RG E L + + G+ YL +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 125
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N + +S+FG + S+ + + +PE + + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ E+ + GK P + +N +VVE +++ F L P +AS+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFR------LYKPRLAST---- 231
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
+ +I C + PE R +R++ EI +S
Sbjct: 232 ----HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 132
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 235
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPEA 483
+ H +L + NI + EN I +FG ++ ++ + APE+
Sbjct: 133 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ K + DV+ G+++ E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 374 AYHY---RTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
Y R + KL++ EY+P GSL YL H +L L+ I +G+ YL
Sbjct: 77 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLG 130
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAP 481
T+ H +L + NI + EN I +FG ++ +F Y AP
Sbjct: 131 TK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 185
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILT 507
E++ K + DV+ G+++ E+ T
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPEA 483
+ H +L + NI + EN I +FG ++ ++ + APE+
Sbjct: 133 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ K + DV+ G+++ E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 138
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 139 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 193
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E+ L + I+ + YL + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK----NF 137
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V +LL+ +
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYELLEKDYRME-RPE 240
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 241 GCPEKVYELMRACWQWNPSDR 261
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 136
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 137 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 163
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 164 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 218
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 133 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 187
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 33/277 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G + + V +K ++E AM+ + F E + +L H ++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
LV+E++ G L L RG E L + + G+ YL +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 123
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N + +S+FG + S+ + + +PE + + K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ E+ + GK P + +N +VVE +++ F L P +AS+
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFR------LYKPRLAST---- 229
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
+ +I C + PE R +R++ EI +S
Sbjct: 230 ----HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 150
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPEA 483
+ H +L + NI + EN I +FG ++ ++ + APE+
Sbjct: 151 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ K + DV+ G+++ E+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALF---AYKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F A+ APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ EY+P GSL YL H +L L+ I +G+ YL T
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 150
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPEA 483
+ H +L + NI + EN I +FG ++ ++ + APE+
Sbjct: 151 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ K + DV+ G+++ E+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y+ + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
R ++ E++ G+LL L R + E++ L + I+ + YL + +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK----NF 130
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ K + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID +V +LL+ +
Sbjct: 191 SDVWAFGVLLWEIAT------YGMSPYPGID----------PSQVYELLEKDYRME-RPE 233
Query: 553 GEMEQLLEIGRACTQSDPEQR 573
G E++ E+ RAC Q +P R
Sbjct: 234 GCPEKVYELMRACWQWNPSDR 254
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 374 AYHYRTDEK--LLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
Y + L+ EY+P GSL L H +R H +L L+ I +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKL-----LQYTSQICKGMEYLG 134
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-------NSANLAQALFAYKAPE 482
T+ H +L + NI + EN I +FG ++ ++ + APE
Sbjct: 135 TK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
+ V +K +K + R F +E +G+ H NV+ ++ +++ E++ GSL
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENE 454
L + G + T + +++GIA G+ YL A ++ H +L + NI ++
Sbjct: 122 DSFLRQNDG----QFTVIQLVGMLRGIAAGMKYL----ADMNYVHRDLAARNILVNSNLV 173
Query: 455 PLISEFGFYTMI---------NSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG + SA + + APEAIQ K T DV+ GI++ E+
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 233
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P +TN DV+ + D + + P + QL+
Sbjct: 234 MSYGERPYWDMTNQ----DVINAIEQ-----------DYRLPPPMDCPSALHQLM---LD 275
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDA 595
C Q D R + + V + ++ ++ ++ A
Sbjct: 276 CWQKDRNHRPKFGQIVNTLDKMIRNPNSLKA 306
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 57 LSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFD--------------------- 95
SG++ +D L ++ RGL+ + L N+FSGE+P +
Sbjct: 330 FSGELPMDTLLKM---RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 386
Query: 96 -----EMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSF--DQPTLVR 148
L++L+ NN F G++PP+L L LHL N +GTIPS L
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446
Query: 149 LNLSSNKLEGEIPASLL 165
L L N LEGEIP L+
Sbjct: 447 LKLWLNMLEGEIPQELM 463
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 68 ELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTEL 127
EL ++ L + LD N +GEIP G L + SNN+ G +P + +L +L L
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSG-LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 128 HLESNQFNGTIPS--FDQPTLVRLNLSSNKLEGEIPASLLR 166
L +N F+G IP+ D +L+ L+L++N G IPA++ +
Sbjct: 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 45 GIVTGLYINSMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLW 104
G + L I+ +SG +DV L L + N FS IP + + AL+ L
Sbjct: 178 GELKHLAISGNKISGDVDVSRCVNLEFLD------VSSNNFSTGIP--FLGDCSALQHLD 229
Query: 105 FSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEGEIP 161
S NK G ++ L L++ SNQF G IP +L L+L+ NK GEIP
Sbjct: 230 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIP 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L+ L+ + L +N+F+GEIP L L S N F G +PP L L L S
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 132 NQFNGTIPSFDQPTLVR------LNLSSNKLEGEIPASLLRFNAS 170
N F+G +P TL++ L+LS N+ GE+P SL +AS
Sbjct: 328 NNFSGELP---MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 68 ELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLW---FSNNKFRGRLPPSLFKLPHL 124
E+ + L + L N SG IP DE+G LR L S+NK GR+P ++ L L
Sbjct: 651 EIGSMPYLFILNLGHNDISGSIP----DEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706
Query: 125 TELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEGEIPASLLRFNASSFSGNAGLCG 180
TE+ L +N +G IP Q E PA L N GLCG
Sbjct: 707 TEIDLSNNNLSGPIPEMGQ------------FETFPPAKFLN--------NPGLCG 742
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 85 FSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPS--FD 142
+ G P FD G++ L S N G +P + +P+L L+L N +G+IP D
Sbjct: 620 YGGHTSP-TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD 678
Query: 143 QPTLVRLNLSSNKLEGEIPASL 164
L L+LSSNKL+G IP ++
Sbjct: 679 LRGLNILDLSSNKLDGRIPQAM 700
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 57 LSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFD--------------------- 95
SG++ +D L ++ RGL+ + L N+FSGE+P +
Sbjct: 327 FSGELPMDTLLKM---RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 383
Query: 96 -----EMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSF--DQPTLVR 148
L++L+ NN F G++PP+L L LHL N +GTIPS L
Sbjct: 384 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 443
Query: 149 LNLSSNKLEGEIPASLL 165
L L N LEGEIP L+
Sbjct: 444 LKLWLNMLEGEIPQELM 460
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 68 ELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTEL 127
EL ++ L + LD N +GEIP G L + SNN+ G +P + +L +L L
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSG-LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 128 HLESNQFNGTIPS--FDQPTLVRLNLSSNKLEGEIPASLLR 166
L +N F+G IP+ D +L+ L+L++N G IPA++ +
Sbjct: 517 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 45 GIVTGLYINSMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLW 104
G + L I+ +SG +DV L L + N FS IP + + AL+ L
Sbjct: 175 GELKHLAISGNKISGDVDVSRCVNLEFLD------VSSNNFSTGIP--FLGDCSALQHLD 226
Query: 105 FSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEGEIP 161
S NK G ++ L L++ SNQF G IP +L L+L+ NK GEIP
Sbjct: 227 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIP 283
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L+ L+ + L +N+F+GEIP L L S N F G +PP L L L S
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 132 NQFNGTIPSFDQPTLVR------LNLSSNKLEGEIPASLLRFNAS 170
N F+G +P TL++ L+LS N+ GE+P SL +AS
Sbjct: 325 NNFSGELP---MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 68 ELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLW---FSNNKFRGRLPPSLFKLPHL 124
E+ + L + L N SG IP DE+G LR L S+NK GR+P ++ L L
Sbjct: 648 EIGSMPYLFILNLGHNDISGSIP----DEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 703
Query: 125 TELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEGEIPASLLRFNASSFSGNAGLCG 180
TE+ L +N +G IP Q E PA L N GLCG
Sbjct: 704 TEIDLSNNNLSGPIPEMGQ------------FETFPPAKFLN--------NPGLCG 739
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 85 FSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPS--FD 142
+ G P FD G++ L S N G +P + +P+L L+L N +G+IP D
Sbjct: 617 YGGHTSP-TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD 675
Query: 143 QPTLVRLNLSSNKLEGEIPASL 164
L L+LSSNKL+G IP ++
Sbjct: 676 LRGLNILDLSSNKLDGRIPQAM 697
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
LG G GS Y + + G V VK+++ S+ F+ E+ L L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 374 AYHYRTDEK--LLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y + L+ E++P GSL YL H +L L+ I +G+ YL T
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 135
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA--------LFAYKAPE 482
+ H +L + NI + EN I +FG ++ +F Y APE
Sbjct: 136 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 190
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++ K + DV+ G+++ E+ T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 299 VNGQKGVFGLPDLMKAAAEVLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDA-FDT 356
V K V DL+ E +G G G + + AD V VK +E+ A F
Sbjct: 104 VPKDKWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
E R L + H N++ + + +V E + GG L L + L L+
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQ 217
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFY------TMINSAN 470
+V A G+ YL ++ H +L + N ++ +N IS+FG S
Sbjct: 218 MVGDAAAGMEYLESKCC----IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG 273
Query: 471 LAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTN 517
L Q + APEA+ G+ + + DV+ GI++ E + G P L+N
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 317 EVLGNGGLGSSYKAMMAD--GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+ +G G G M+ D G V VK +K + AF E + +LRHSN++ L
Sbjct: 27 QTIGKGEFGD---VMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 81
Query: 375 YHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
L +V EY+ GSL+ L R L LK + + YL
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 136
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-FAYKAPEAIQSGKVTPK 492
+ H +L + N+ +S +N +S+FG +S L + APEA++ K + K
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 493 CDVYCLGIIILEILT-GKFP 511
DV+ GI++ EI + G+ P
Sbjct: 195 SDVWSFGILLWEIYSFGRVP 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 317 EVLGNGGLGSSYKAMM------ADGVTVVVKRMKESS-AMARDAFDTEVRRLGRLRHSNV 369
E LG G YK + V +K +K+ + R+ F E RL+H NV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLL-----HGDRGPSHDELTW------PARLKIV 418
+ L + +++ Y G L L H D G + D+ T P + +V
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL--- 475
IA G+ YL + + H +L + N+ + + IS+ G + + +A+ + L
Sbjct: 152 AQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 476 ---FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APEAI GK + D++ G+++ E+ +
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 317 EVLGNGGLGSSYKAMM------ADGVTVVVKRMKESS-AMARDAFDTEVRRLGRLRHSNV 369
E LG G YK + V +K +K+ + R+ F E RL+H NV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLL-----HGDRGPSHDELTW------PARLKIV 418
+ L + +++ Y G L L H D G + D+ T P + +V
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL--- 475
IA G+ YL + + H +L + N+ + + IS+ G + + +A+ + L
Sbjct: 135 AQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 476 ---FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APEAI GK + D++ G+++ E+ +
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 299 VNGQKGVFGLPDLMKAAAEVLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDA-FDT 356
V K V DL+ E +G G G + + AD V VK +E+ A F
Sbjct: 104 VPKDKWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
E R L + H N++ + + +V E + GG L L + L L+
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQ 217
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFY------TMINSAN 470
+V A G+ YL ++ H +L + N ++ +N IS+FG S
Sbjct: 218 MVGDAAAGMEYLESKCC----IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273
Query: 471 LAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTN 517
L Q + APEA+ G+ + + DV+ GI++ E + G P L+N
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 317 EVLGNGGLGSSYKAMMAD--GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+ +G G G M+ D G V VK +K + AF E + +LRHSN++ L
Sbjct: 12 QTIGKGEFGD---VMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 66
Query: 375 YHYRTDEK---LLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+EK +V EY+ GSL+ L RG S L LK + + YL
Sbjct: 67 V--IVEEKGGLYIVTEYMAKGSLVDYLRS-RGRS--VLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-FAYKAPEAIQSGKVT 490
+ H +L + N+ +S +N +S+FG +S L + APEA++ K +
Sbjct: 122 ----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 491 PKCDVYCLGIIILEILT-GKFP 511
K DV+ GI++ EI + G+ P
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVP 199
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDA-----FDTEVRRLGRLRHSNVL 370
E+LG GG+ + A + D V VK ++ + +ARD F E + L H ++
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 371 A------------PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
A PL Y +V EY+ G +L ++H + GP +T ++++
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTE-GP----MTPKRAIEVI 122
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLAQA 474
+ + + H + H ++K +NI IS N + +FG I NS A
Sbjct: 123 ADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 475 LFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+ Y +PE + V + DVY LG ++ E+LTG+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 323 GLGSSYKAMMADGVTVVVKRMKESSA---MARDAFDTEVRRLGRLRHSNVLAPLAYHYRT 379
G G Y A +K+ + SS+ ++R+ + EV L +RH N++
Sbjct: 28 GTGKEYAAKF-------IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK 80
Query: 380 DEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE-LAHLDLP 438
+ +L+ E + GG L L + DE T + ++ I G+ YLH++ +AH D
Sbjct: 81 TDVVLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYLHSKRIAHFD-- 133
Query: 439 HGNLKSSNIFISPENEP----LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTP 491
LK NI + +N P + +FG I + N + +F + APE + +
Sbjct: 134 ---LKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL 190
Query: 492 KCDVYCLGIIILEILTGKFP 511
+ D++ +G+I +L+G P
Sbjct: 191 EADMWSIGVITYILLSGASP 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDA-----FDTEVRRLGRLRHSNVL 370
E+LG GG+ + A + D V VK ++ + +ARD F E + L H ++
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 371 A------------PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
A PL Y +V EY+ G +L ++H + GP +T ++++
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTE-GP----MTPKRAIEVI 122
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLAQA 474
+ + + H + H ++K +NI IS N + +FG I NS A
Sbjct: 123 ADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 475 LFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+ Y +PE + V + DVY LG ++ E+LTG+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
+ V +K +K + R F +E +G+ H NV+ ++ +++ E++ GSL
Sbjct: 36 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 95
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENE 454
L + G + T + +++GIA G+ YL A ++ H L + NI ++
Sbjct: 96 DSFLRQNDG----QFTVIQLVGMLRGIAAGMKYL----ADMNYVHRALAARNILVNSNLV 147
Query: 455 PLISEFGFYTMI---------NSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG + SA + + APEAIQ K T DV+ GI++ E+
Sbjct: 148 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 207
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P +TN + V +A + D + + P + QL+
Sbjct: 208 MSYGERPYWDMTNQD--------VINAIEQ-------DYRLPPPMDCPSALHQLM---LD 249
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDA 595
C Q D R + + V + ++ ++ ++ A
Sbjct: 250 CWQKDRNHRPKFGQIVNTLDKMIRNPNSLKA 280
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 112/277 (40%), Gaps = 33/277 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G + + V +K ++E AM+ + F E + +L H ++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
LV E++ G L L RG E L + + G+ YL +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAC----VI 126
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N + +S+FG + S+ + + +PE + + K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ E+ + GK P + +N +VVE +++ F L P +AS+
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFR------LYKPRLAST---- 232
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
+ +I C + PE R +R++ EI +S
Sbjct: 233 ----HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 323 GLGSSYKAMMADGVTVVVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTD 380
G G Y A + KR SS ++R+ + EV L +RH N++
Sbjct: 49 GTGKEYAAKF------IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT 102
Query: 381 EKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE-LAHLDLPH 439
+ +L+ E + GG L L + DE T + ++ I G+ YLH++ +AH D
Sbjct: 103 DVVLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYLHSKRIAHFD--- 154
Query: 440 GNLKSSNIFISPENEP----LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPK 492
LK NI + +N P + +FG I + N + +F + APE + + +
Sbjct: 155 --LKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ +G+I +L+G P
Sbjct: 213 ADMWSIGVITYILLSGASP 231
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 323 GLGSSYKAMMADGVTVVVKRMKESSA---MARDAFDTEVRRLGRLRHSNVLAPLAYHYRT 379
G G Y A +K+ + SS+ ++R+ + EV L +RH N++
Sbjct: 35 GTGKEYAAKF-------IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK 87
Query: 380 DEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE-LAHLDLP 438
+ +L+ E + GG L L + DE T + ++ I G+ YLH++ +AH D
Sbjct: 88 TDVVLILELVSGGELFDFLAEKESLTEDEAT-----QFLKQILDGVHYLHSKRIAHFD-- 140
Query: 439 HGNLKSSNIFISPENEP----LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTP 491
LK NI + +N P + +FG I + N + +F + APE + +
Sbjct: 141 ---LKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 492 KCDVYCLGIIILEILTGKFP 511
+ D++ +G+I +L+G P
Sbjct: 198 EADMWSIGVITYILLSGASP 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
LG G G Y + +TV VK +KE + M + F E + ++H N++ L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
+V EY+P G+LL L R + +E+T L + I+ + YL + +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLEKK----NF 151
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANL-----AQALFAYKAPEAIQSGKVTPK 492
H +L + N + + +++FG ++ A+ + APE++ + K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 493 CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ EI T Y + GID+ +V DLL E P
Sbjct: 212 SDVWAFGVLLWEIAT------YGMSPYPGIDL----------SQVYDLL--EKGYRMEQP 253
Query: 553 -GEMEQLLEIGRACTQSDPEQR 573
G ++ E+ RAC + P R
Sbjct: 254 EGCPPKVYELMRACWKWSPADR 275
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDA-----FDTEVRRLGRLRHSNVL 370
E+LG GG+ + A + D V VK ++ + +ARD F E + L H ++
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 371 A------------PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
A PL Y +V EY+ G +L ++H + GP +T ++++
Sbjct: 76 AVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTE-GP----MTPKRAIEVI 122
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLAQA 474
+ + + H + H ++K +NI IS N + +FG I NS A
Sbjct: 123 ADACQALNFSHQN----GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 475 LFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+ Y +PE + V + DVY LG ++ E+LTG+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
G V VK+M R+ EV + H NV+ + + DE +V E++ GG+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENE 454
++ +H + + + R + YLH + + H ++KS +I ++ +
Sbjct: 130 TDIV------THTRMNEEQIATVCLSVLRALSYLHNQ----GVIHRDIKSDSILLTSDGR 179
Query: 455 PLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKF 510
+S+FGF ++ + + APE I + D++ LGI+++E++ G+
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 511 P 511
P
Sbjct: 240 P 240
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 317 EVLGNGGLGSSYKAMMAD--GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+ +G G G M+ D G V VK +K + AF E + +LRHSN++ L
Sbjct: 199 QTIGKGEFGD---VMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 253
Query: 375 YHYRTDEK---LLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+EK +V EY+ GSL+ L R L LK + + YL
Sbjct: 254 V--IVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-FAYKAPEAIQSGKVT 490
+ H +L + N+ +S +N +S+FG +S L + APEA++ K +
Sbjct: 309 ----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 491 PKCDVYCLGIIILEILT-GKFP 511
K DV+ GI++ EI + G+ P
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVP 386
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 134 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSN 183
Query: 453 NEPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ A + + +PEAI K T DV+ GI++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 244 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 285
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 103 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 153
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213
Query: 510 FP 511
P
Sbjct: 214 SP 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 103 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 153
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213
Query: 510 FP 511
P
Sbjct: 214 SP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 33/277 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
+G+G G + + V +K ++E AM+ + F E + +L H ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
LV+E++ G L L RG E L + +G+A L +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY--------LEEASVI 125
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N + +S+FG + S+ + + +PE + + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
DV+ G+++ E+ + GK P + +N +VVE +++ F L P +AS+
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFR------LYKPRLAST---- 231
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
+ +I C + PE R +R++ I S
Sbjct: 232 ----HVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 62 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 121
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 122 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 171
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + +PEAI K T DV+ GI++ E+
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 232 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 273
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 274 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 313
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 34/279 (12%)
Query: 309 PDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKE--SSAMARDAFDTEVRRLGRLRH 366
P+ + + +G G G YK + VV ++ + + + E+ L +
Sbjct: 17 PEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 76
Query: 367 SNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
+ + ++ + ++ EY+ GGS L LL P E T+ A I++ I +G+
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK----PGPLEETYIA--TILREILKGLD 130
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPE 482
YLH+E H ++K++N+ +S + + +++FG + + + F + APE
Sbjct: 131 YLHSERK----IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
I+ K D++ LGI +E+ G+ P+ S RV L+
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPPN-----------------SDLHPMRVLFLI- 228
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVR 581
P+ + T + E AC DP R +E ++
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 134 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + +PEAI K T DV+ GI++ E+
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 244 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 285
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 45 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 104
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 105 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 154
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + +PEAI K T DV+ GI++ E+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 215 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 256
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 257 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 296
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 134 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 453 NEPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ A + + +PEAI K T DV+ GI++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 244 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 285
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHD-ELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
L HD + T + +++GIA G+ YL +++ ++ H +L + NI I+
Sbjct: 134 DSFLR-----KHDAQFTVIQLVGMLRGIASGMKYL-SDMGYV---HRDLAARNILINSNL 184
Query: 454 EPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEIL 506
+S+FG ++ A + + +PEAI K T DV+ GI++ E++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 507 T-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRAC 565
+ G+ P ++N + V A EG + + P + QL+ C
Sbjct: 245 SYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LDC 286
Query: 566 TQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
Q D R + + V + ++ ++ G++ TS P+
Sbjct: 287 WQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHD-ELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
L HD + T + +++GIA G+ YL +++ ++ H +L + NI I+
Sbjct: 134 DSFLR-----KHDAQFTVIQLVGMLRGIASGMKYL-SDMGYV---HRDLAARNILINSNL 184
Query: 454 EPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEIL 506
+S+FG ++ A + + +PEAI K T DV+ GI++ E++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 507 T-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRAC 565
+ G+ P ++N + V A EG + + P + QL+ C
Sbjct: 245 SYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LDC 286
Query: 566 TQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
Q D R + + V + ++ ++ G++ TS P+
Sbjct: 287 WQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLY 396
+ KR +SS ++R+ + EV L ++H NV+ + + +L+ E + GG L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 397 LLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEP- 455
L + +E T + ++ I G+ YLH+ L + H +LK NI + N P
Sbjct: 104 FLAEKESLTEEEAT-----EFLKQILNGVYYLHS----LQIAHFDLKPENIMLLDRNVPK 154
Query: 456 ---LISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGK 509
I +FG I+ N + +F + APE + + + D++ +G+I +L+G
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 510 FP 511
P
Sbjct: 215 SP 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 72 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 132 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 181
Query: 453 NEPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ A + + +PEAI K T DV+ GI++ E+
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 242 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 283
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 284 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 323
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 317 EVLGNGGLGSSYKAMMAD--GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+ +G G G M+ D G V VK +K + AF E + +LRHSN++ L
Sbjct: 18 QTIGKGEFGD---VMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG 72
Query: 375 YHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
L +V EY+ GSL+ L R L LK + + YL
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 127
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-FAYKAPEAIQSGKVTPK 492
+ H +L + N+ +S +N +S+FG +S L + APEA++ + K
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 493 CDVYCLGIIILEILT-GKFP 511
DV+ GI++ EI + G+ P
Sbjct: 186 SDVWSFGILLWEIYSFGRVP 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHD-ELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
L HD + T + +++GIA G+ YL +++ ++ H +L + NI I+
Sbjct: 134 DSFLR-----KHDAQFTVIQLVGMLRGIASGMKYL-SDMGYV---HRDLAARNILINSNL 184
Query: 454 EPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEIL 506
+S+FG ++ + + + +PEAI K T DV+ GI++ E++
Sbjct: 185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 507 T-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRAC 565
+ G+ P ++N + V A EG + + P + QL+ C
Sbjct: 245 SYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LDC 286
Query: 566 TQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
Q D R + + V + ++ ++ G++ TS P+
Sbjct: 287 WQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V EY+ GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 134 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 453 NEPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ A + + +PEAI K T DV+ GI++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 244 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 285
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
EVLG+G + G +K +K+S A + + E+ L +++H N++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE-LAH 434
+ T LV + + GG L DR T ++Q + + YLH + H
Sbjct: 75 YESTTHYYLVMQLVSGGELF-----DRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 435 LDLPHGNLKSSNIFISPE--NEPLISEFGFYTMINSANLAQALFA--YKAPEAIQSGKVT 490
DL NL ++++PE ++ +I++FG M + ++ A Y APE + +
Sbjct: 130 RDLKPENL----LYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 491 PKCDVYCLGIIILEILTGKFPSQY 514
D + +G+I +L G +P Y
Sbjct: 186 KAVDCWSIGVITYILLCG-YPPFY 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 377 YRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y D KL ++ EY+ GGS L LL + GP L I++ I +G+ YLH+E
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLL--EPGP----LDETQIATILREILKGLDYLHSEKK-- 140
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
H ++K++N+ +S E +++FG + + + F + APE I+
Sbjct: 141 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Query: 492 KCDVYCLGIIILEILTGKFPSQYL 515
K D++ LGI +E+ G+ P L
Sbjct: 199 KADIWSLGITAIELARGEPPHSEL 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 41/257 (15%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V V +K +K + R F E +G+ H NV+ R ++V E++ G+L
Sbjct: 72 VAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 395 LYLLHGDRGPSHD-ELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
L HD + T + +++GIA G+ YL A + H +L + NI ++
Sbjct: 132 DAFLR-----KHDGQFTVIQLVGMLRGIAAGMRYL----ADMGYVHRDLAARNILVNSNL 182
Query: 454 EPLISEFGFYTMINSANLAQALFA---------YKAPEAIQSGKVTPKCDVYCLGIIILE 504
+S+FG +I +A++ + APEAIQ K T DV+ GI++ E
Sbjct: 183 VCKVSDFGLSRVIEDD--PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWE 240
Query: 505 ILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGR 563
+++ G+ P ++N + V A EG + + + P + QL+
Sbjct: 241 VMSYGERPYWDMSNQD--------VIKAIEEGY-------RLPAPMDCPAGLHQLM---L 282
Query: 564 ACTQSDPEQRLEMREAV 580
C Q + +R + + V
Sbjct: 283 DCWQKERAERPKFEQIV 299
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
+ V +K +K + R F +E +G+ H N++ + +++ EY+ GSL
Sbjct: 43 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 102
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L + G R ++Q G+ RGIG L+ + H +L + NI ++
Sbjct: 103 DAFLRKNDG----------RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN 152
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + APEAI K T DV+ GI++ E+
Sbjct: 153 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEG-RVTDLLDPEIA 546
++ G+ P ++N + V A EG R+ +D IA
Sbjct: 213 MSYGERPYWDMSNQD--------VIKAIEEGYRLPPPMDCPIA 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 317 EVLGNGGLGSSYKA-MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP--- 372
+V+G G G A A+ V VK +++ + + + + + + NV P
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVKHPFLV 102
Query: 373 -LAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L + ++T +KL V +YI GG L Y L +R L AR + IA +GYLH+
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERC----FLEPRARFYAAE-IASALGYLHS 157
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQS 486
L++ + +LK NI + + ++++FG N + F Y APE +
Sbjct: 158 ----LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 487 GKVTPKCDVYCLGIIILEILTGKFPSQYLTN 517
D +CLG ++ E+L G P Y N
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYG-LPPFYSRN 243
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 39 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 98
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 99 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 151
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 152 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 207
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 208 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 264
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 265 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 310
Query: 585 EI 586
I
Sbjct: 311 AI 312
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 317 EVLGNGGLGSSYKAMMAD-GVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAP-- 372
E LG GG G + + D G V +K+ + E S R+ + E++ + +L H NV++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 373 ----LAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
L D LL EY GG L YL + E P R ++ I+ + Y
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE--GPIR-TLLSDISSALRY 137
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLIS---EFGFYTMINSANLAQAL---FAYKAP 481
LH + H +LK NI + P + LI + G+ ++ L Y AP
Sbjct: 138 LHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
E ++ K T D + G + E +TG P
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 317 EVLGNGGLGSSYKAMMAD-GVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAP-- 372
E LG GG G + + D G V +K+ + E S R+ + E++ + +L H NV++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 373 ----LAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
L D LL EY GG L YL + E P R ++ I+ + Y
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE--GPIR-TLLSDISSALRY 136
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLIS---EFGFYTMINSANLAQAL---FAYKAP 481
LH + H +LK NI + P + LI + G+ ++ L Y AP
Sbjct: 137 LHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
E ++ K T D + G + E +TG P
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 40 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 99
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 100 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 152
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 153 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 208
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 209 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 265
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 266 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 311
Query: 585 EI 586
I
Sbjct: 312 AI 313
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 13 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 72
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 73 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 125
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 126 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 181
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 182 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 238
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 239 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 284
Query: 585 EI 586
I
Sbjct: 285 AI 286
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
+ V +K +K + R F +E +G+ H N++ + +++ EY+ GSL
Sbjct: 37 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 96
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L + G R ++Q G+ RGIG L+ + H +L + NI ++
Sbjct: 97 DAFLRKNDG----------RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN 146
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + APEAI K T DV+ GI++ E+
Sbjct: 147 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEG-RVTDLLDPEIA 546
++ G+ P ++N + V A EG R+ +D IA
Sbjct: 207 MSYGERPYWDMSNQD--------VIKAIEEGYRLPPPMDCPIA 241
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A + ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ A Y PE I+ K
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + + I VE+ F DL+ + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 247 QRPMLREVLE 256
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 377 YRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y D KL ++ EY+ GGS L LL + GP DE I++ I +G+ YLH+E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLL--EPGPL-DETQIAT---ILREILKGLDYLHSEKK-- 125
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
H ++K++N+ +S E +++FG + + + F + APE I+
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 492 KCDVYCLGIIILEILTGKFPSQYL 515
K D++ LGI +E+ G+ P L
Sbjct: 184 KADIWSLGITAIELARGEPPHSEL 207
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 133
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 134 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 189
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 246
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 247 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 585 EI 586
I
Sbjct: 293 AI 294
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 319 LGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
+G G G A + + G V VK+M R+ EV + +H NV+ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
DE +V E++ GG+L ++ +H + + + + + LH + +
Sbjct: 92 VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHAQ----GV 141
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKC 493
H ++KS +I ++ + +S+FGF ++ + + APE I P+
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 494 DVYCLGIIILEILTGKFP 511
D++ LGI+++E++ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + A + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 377 YRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y D KL ++ EY+ GGS L LL + GP L I++ I +G+ YLH+E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLL--EPGP----LDETQIATILREILKGLDYLHSEKK-- 125
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTP 491
H ++K++N+ +S E +++FG + + + F + APE I+
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 492 KCDVYCLGIIILEILTGKFPSQYL 515
K D++ LGI +E+ G+ P L
Sbjct: 184 KADIWSLGITAIELARGEPPHSEL 207
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 133
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 134 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 189
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 246
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 247 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 585 EI 586
I
Sbjct: 293 AI 294
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 309 PDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKE--SSAMARDAFDTEVRRLGRLRH 366
P+ + E +G G G +K + VV ++ + + + E+ L +
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 84
Query: 367 SNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
V + + + ++ EY+ GGS L LL + GP L I++ I +G+
Sbjct: 85 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGP----LDETQIATILREILKGLD 138
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPE 482
YLH+E H ++K++N+ +S E +++FG + + + F + APE
Sbjct: 139 YLHSEKKI----HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYL 515
I+ K D++ LGI +E+ G+ P L
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 319 LGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
+G G G A + + G V VK+M R+ EV + +H NV+ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
DE +V E++ GG+L ++ +H + + + + + LH + +
Sbjct: 88 VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHAQ----GV 137
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKC 493
H ++KS +I ++ + +S+FGF ++ + + APE I P+
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 494 DVYCLGIIILEILTGKFP 511
D++ LGI+++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 319 LGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
+G G G A + + G V VK+M R+ EV + +H NV+ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
DE +V E++ GG+L ++ +H + + + + + LH + +
Sbjct: 99 VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHAQ----GV 148
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKC 493
H ++KS +I ++ + +S+FGF ++ + + APE I P+
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 494 DVYCLGIIILEILTGKFP 511
D++ LGI+++E++ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 132
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 133 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 188
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 189 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 245
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 246 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 291
Query: 585 EI 586
I
Sbjct: 292 AI 293
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
+ V +K +K + R F +E +G+ H N++ + +++ EY+ GSL
Sbjct: 58 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L + G R ++Q G+ RGIG L+ + H +L + NI ++
Sbjct: 118 DAFLRKNDG----------RFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN 167
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + APEAI K T DV+ GI++ E+
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEG-RVTDLLDPEIA 546
++ G+ P ++N + V A EG R+ +D IA
Sbjct: 228 MSYGERPYWDMSNQD--------VIKAIEEGYRLPPPMDCPIA 262
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 131
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 132 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 187
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 188 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 244
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 245 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 290
Query: 585 EI 586
I
Sbjct: 291 AI 292
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 319 LGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
+G G G A + + G V VK+M R+ EV + +H NV+ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
DE +V E++ GG+L ++ +H + + + + + LH + +
Sbjct: 97 VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHAQ----GV 146
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKC 493
H ++KS +I ++ + +S+FGF ++ + + APE I P+
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 494 DVYCLGIIILEILTGKFP 511
D++ LGI+++E++ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 18 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 77
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 130
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 131 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 186
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 243
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 244 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 289
Query: 585 EI 586
I
Sbjct: 290 AI 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 16 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 75
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLV-------VLPYMKHGDLRNFIRNETHNPTVK 128
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG Y
Sbjct: 129 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 241
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 242 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 287
Query: 585 EI 586
I
Sbjct: 288 AI 289
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +K+ +A+D TE R L RH
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-F 209
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R S D AR + I + YL
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----ARFYGAE-IVSALDYL 264
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+E ++ + +LK N+ + + I++FG F Y APE +
Sbjct: 265 HSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +K+ +A+D TE R L RH
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-F 212
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R S D AR + I + YL
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----ARFYGAE-IVSALDYL 267
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+E ++ + +LK N+ + + I++FG F Y APE +
Sbjct: 268 HSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 319 LGNGGLGSSYKAMMA----DGVTVVVKRMKES--SAMARDAFDTEVRRLGRLRHSNVLAP 372
+G G G KA++ DG V+K + S S+ R+ EV L ++H N++
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE---LTWPARLKIVQGIARGIGYLH 429
+V +Y GG L ++ +G E L W VQ I + ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW-----FVQ-ICLALKHVH 142
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA-NLAQALFA---YKAPEAIQ 485
+ H ++KS NIF++ + + +FG ++NS LA+A Y +PE +
Sbjct: 143 DR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 486 SGKVTPKCDVYCLGIIILEILTGK 509
+ K D++ LG ++ E+ T K
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLK 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 319 LGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
+G G G A + + G V VK+M R+ EV + +H NV+ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
DE +V E++ GG+L ++ +H + + + + + LH + +
Sbjct: 142 VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHAQ----GV 191
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKC 493
H ++KS +I ++ + +S+FGF ++ + + APE I P+
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 494 DVYCLGIIILEILTGKFP 511
D++ LGI+++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 317 EVLGNGGLGSSY---KAMMAD-GVTVVVKRMKESSAMARDAFDTEVRR--LGRLRHSNVL 370
+VLG G G + K D G +K +K+++ RD T++ R L + H V+
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L Y ++T+ KL L+ +++ GG L L + + +++ + + +A G+ +LH
Sbjct: 94 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALGLDHLH 147
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYT-MINSANLAQAL---FAYKAPEAIQ 485
+ L + + +LK NI + E +++FG I+ A + Y APE +
Sbjct: 148 S----LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQ 513
+ D + G+++ E+LTG P Q
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 319 LGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHY 377
+G G G A + + G V VK+M R+ EV + +H NV+ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 378 RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDL 437
DE +V E++ GG+L ++ +H + + + + + LH + +
Sbjct: 219 VGDELWVVMEFLEGGALTDIV------THTRMNEEQIAAVCLAVLQALSVLHAQ----GV 268
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKC 493
H ++KS +I ++ + +S+FGF ++ + + APE I P+
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 494 DVYCLGIIILEILTGKFP 511
D++ LGI+++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPL-AYHYRTDEKLLVYEYIPGGSLL 395
+ KR +S ++R+ + EV L ++ H NV+ Y RTD +L+ E + GG L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELF 103
Query: 396 YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT-ELAHLDLPHGNLKSSNIFISPENE 454
L S +E T ++ I G+ YLHT ++AH D LK NI + +N
Sbjct: 104 DFLAQKESLSEEEAT-----SFIKQILDGVNYLHTKKIAHFD-----LKPENIMLLDKNI 153
Query: 455 PL----ISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
P+ + +FG I + +F + APE + + + D++ +G+I +L+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 508 GKFP 511
G P
Sbjct: 214 GASP 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR + L H N++ LV EY GG +
Sbjct: 43 AVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 395 L-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
YL+ R + AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 101 FDYLVAHGRMKEKE-----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADM 150
Query: 454 EPLISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVT-PKCDVYCLGIIILEILTGK 509
I++FGF N A Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 510 FP 511
P
Sbjct: 211 LP 212
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPL-AYHYRTDEKLLVYEYIPGGSLL 395
+ KR +S ++R+ + EV L ++ H NV+ Y RTD +L+ E + GG L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELF 103
Query: 396 YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT-ELAHLDLPHGNLKSSNIFISPENE 454
L S +E T ++ I G+ YLHT ++AH D LK NI + +N
Sbjct: 104 DFLAQKESLSEEEAT-----SFIKQILDGVNYLHTKKIAHFD-----LKPENIMLLDKNI 153
Query: 455 PL----ISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
P+ + +FG I + +F + APE + + + D++ +G+I +L+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 508 GKFP 511
G P
Sbjct: 214 GASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPL-AYHYRTDEKLLVYEYIPGGSLL 395
+ KR +S ++R+ + EV L ++ H NV+ Y RTD +L+ E + GG L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELF 103
Query: 396 YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT-ELAHLDLPHGNLKSSNIFISPENE 454
L S +E T ++ I G+ YLHT ++AH D LK NI + +N
Sbjct: 104 DFLAQKESLSEEEAT-----SFIKQILDGVNYLHTKKIAHFD-----LKPENIMLLDKNI 153
Query: 455 PL----ISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
P+ + +FG I + +F + APE + + + D++ +G+I +L+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 508 GKFP 511
G P
Sbjct: 214 GASP 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + A + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPL-AYHYRTDEKLLVYEYIPGGSLL 395
+ KR +S ++R+ + EV L ++ H NV+ Y RTD +L+ E + GG L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELF 103
Query: 396 YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT-ELAHLDLPHGNLKSSNIFISPENE 454
L S +E T ++ I G+ YLHT ++AH D LK NI + +N
Sbjct: 104 DFLAQKESLSEEEAT-----SFIKQILDGVNYLHTKKIAHFD-----LKPENIMLLDKNI 153
Query: 455 PL----ISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
P+ + +FG I + +F + APE + + + D++ +G+I +L+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 508 GKFP 511
G P
Sbjct: 214 GASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 339 VVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPL-AYHYRTDEKLLVYEYIPGGSLL 395
+ KR +S ++R+ + EV L ++ H NV+ Y RTD +L+ E + GG L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELF 103
Query: 396 YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT-ELAHLDLPHGNLKSSNIFISPENE 454
L S +E T ++ I G+ YLHT ++AH D LK NI + +N
Sbjct: 104 DFLAQKESLSEEEAT-----SFIKQILDGVNYLHTKKIAHFD-----LKPENIMLLDKNI 153
Query: 455 PL----ISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
P+ + +FG I + +F + APE + + + D++ +G+I +L+
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 508 GKFP 511
G P
Sbjct: 214 GASP 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +K+ +A+D TE R L RH
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-F 70
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R S D AR + I + YL
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----ARFYGAE-IVSALDYL 125
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+E ++ + +LK N+ + + I++FG F Y APE +
Sbjct: 126 HSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + A + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR L H N++ LV EY GG +
Sbjct: 43 AVKIIDKTQLNSSSLQK--LFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 395 L-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
YL+ R + AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 101 FDYLVAHGRXKEKE-----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADX 150
Query: 454 EPLISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVT-PKCDVYCLGIIILEILTGK 509
I++FGF N A Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 510 FP 511
P
Sbjct: 211 LP 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 51/287 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVR---RIVEIQQSDGNMD 594
+L + R C + P QR ++ V RI+ + ++ +D
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+ LG GG G ++A D +KR++ + +AR+ EV+ L +L H ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 375 --YHYRTDEKLL-----VYEYIP-----GGSLLYLLHGDRGPSHDELTWPARLKIVQGIA 422
T EKL VY YI +L ++G + +E L I IA
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG--RCTIEERERSVCLHIFLQIA 128
Query: 423 RGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----- 477
+ +LH++ L H +LK SNIF + ++ + +FG T ++ Q +
Sbjct: 129 EAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 478 -----------YKAPEAIQSGKVTPKCDVYCLGIIILEIL 506
Y +PE I + K D++ LG+I+ E+L
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +K+ +A+D TE R L RH
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-F 71
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R S D AR + I + YL
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----ARFYGAE-IVSALDYL 126
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+E ++ + +LK N+ + + I++FG F Y APE +
Sbjct: 127 HSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +K+ +A+D TE R L RH
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-F 69
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R S D AR + I + YL
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR----ARFYGAE-IVSALDYL 124
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+E ++ + +LK N+ + + I++FG F Y APE +
Sbjct: 125 HSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMA------RDAFDTEVRRLGRLRHSNV 369
E LG+G K + G+ K +K+ + A R+ + EV L ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 370 LAPL-AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y RTD +L+ E + GG L L S +E T ++ I G+ YL
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 429 HT-ELAHLDLPHGNLKSSNIFISPENEPL----ISEFGFYTMINSANLAQALFA---YKA 480
HT ++AH D LK NI + +N P+ + +FG I + +F + A
Sbjct: 132 HTKKIAHFD-----LKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE + + + D++ +G+I +L+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR + L H N++ LV EY GG +
Sbjct: 43 AVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 395 L-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
YL+ R + AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 101 FDYLVAHGRMKEKE-----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADM 150
Query: 454 EPLISEFGF---YTMINSANLAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGK 509
I++FGF +T N + Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 510 FP 511
P
Sbjct: 211 LP 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 309 PDLMKAAAEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS 367
P+ + E LG G GS YKA+ + G V +K++ S + E+ + +
Sbjct: 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSP 84
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIG 426
+V+ +++ + +V EY GS+ ++ ++ + DE+ I+Q +G+
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA-----TILQSTLKGLE 139
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA----NLAQALFAYKAPE 482
YLH + H ++K+ NI ++ E +++FG + N + APE
Sbjct: 140 YLH----FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFP 511
IQ D++ LGI +E+ GK P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 18 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 137 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 244
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + LLE+ R C Q +P+ R E + I E
Sbjct: 245 DKPD-------NCP---DMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 51/287 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVR---RIVEIQQSDGNMD 594
+L + R C + P QR ++ V RI+ + ++ +D
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR + L H N++ LV EY GG +
Sbjct: 43 AVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 395 L-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
YL+ R + AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 101 FDYLVAHGRMKEKE-----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADM 150
Query: 454 EPLISEFGF---YTMINSANLAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGK 509
I++FGF +T N + Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 510 FP 511
P
Sbjct: 211 LP 212
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 48/222 (21%)
Query: 317 EVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDA-----FDTEVRRLGRLRHSN 368
E+LG GG+ + A + V V V R +ARD F E + L H
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRAD----LARDPSFYLRFRREAQNAAALNHPA 73
Query: 369 VLA------------PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
++A PL Y +V EY+ G +L ++H + GP +T ++
Sbjct: 74 IVAVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTE-GP----MTPKRAIE 120
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLA 472
++ + + + H + H ++K +NI IS N + +FG I NS
Sbjct: 121 VIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 473 QALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
A+ Y +PE + V + DVY LG ++ E+LTG+ P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 41/282 (14%)
Query: 318 VLGNGGLGSSYKAMMAD-GVTVVVKRMKESS--AMARDAFDTEVRRLGRLRHSNVLAPLA 374
++G G G K D G V +K+ ES M + E++ L +LRH N++ L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ LV+E++ L D + L + K + I GIG+ H+
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ----ALFAYKAPEAIQSG-KV 489
++ H ++K NI +S + +FGF + + A Y+APE + K
Sbjct: 144 -NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 490 TPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSE--GRVTDLLD--- 542
DV+ +G ++ E+ G+ FP G+ ID + + R +L +
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFP------GDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 543 -------PEIAS----STNSPGEMEQLLEIGRACTQSDPEQR 573
PEI P E ++++ + C DP++R
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR + L H N++ LV EY GG +
Sbjct: 43 AVRIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 395 L-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
YL+ R + AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 101 FDYLVAHGRMKEKE-----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADM 150
Query: 454 EPLISEFGF---YTMINSANLAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGK 509
I++FGF +T N + Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 510 FP 511
P
Sbjct: 211 LP 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIH 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 307 GLPDLMKAAAEV--------LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEV 358
G PD++ + LG G G+ Y A +V ++ S + ++ + ++
Sbjct: 11 GTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 359 RR----LGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
RR L H N+L Y Y L+ EY P G L L + + DE
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTAT- 127
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA 474
I++ +A + Y H + + H ++K N+ + + E I++FG+ +++ +L +
Sbjct: 128 --IMEELADALMYCHGK----KVIHRDIKPENLLLGLKGELKIADFGW--SVHAPSLRRK 179
Query: 475 LFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
Y PE I+ K D++C+G++ E+L G P
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 48/222 (21%)
Query: 317 EVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDA-----FDTEVRRLGRLRHSN 368
E+LG GG+ + A + V V V R +ARD F E + L H
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRAD----LARDPSFYLRFRREAQNAAALNHPA 73
Query: 369 VLA------------PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
++A PL Y +V EY+ G +L ++H + GP +T ++
Sbjct: 74 IVAVYATGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTE-GP----MTPKRAIE 120
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLA 472
++ + + + H + H ++K +NI IS N + +FG I NS
Sbjct: 121 VIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 473 QALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
A+ Y +PE + V + DVY LG ++ E+LTG+ P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 109/274 (39%), Gaps = 33/274 (12%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 127
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + S+ ++ + PE + K + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN A ++G L P +AS
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE--------TAEHIAQG--LRLYRPHLAS----- 232
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E++ I +C ++R + + I+++
Sbjct: 233 ---EKVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ A Y PE I+ K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 318 VLGNGGLGSSYKAMMADGVT---VVVKRMKESSAMARDAFDT--EVRRLGRLRHSNVLAP 372
+LG G G K D +T VK + ++SA +D EV L +L H N++
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 373 LAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ +V E GG L ++ R HD AR I++ + GI Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD----AAR--IIKQVFSGITYMHKH 140
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
++ H +LK NI + + + I +FG T + Y APE ++
Sbjct: 141 ----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFP----SQY-----LTNGNGGIDVVEW 527
G KCDV+ G+I+ +L+G P ++Y + G D+ +W
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 55 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIH 169
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 170 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 229
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 230 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 275
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 276 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 110/278 (39%), Gaps = 33/278 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 142
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMI-----NSANLAQALFAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + S+ ++ + PE + K + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN + E +A L P +AS
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQGLR------LYRPHLAS----- 247
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSD 590
E++ I +C ++R + + I+++ +
Sbjct: 248 ---EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V E + GSL
Sbjct: 45 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 104
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 105 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 154
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + +PEAI K T DV+ GI++ E+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 215 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 256
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 257 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 296
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 108/278 (38%), Gaps = 33/278 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 142
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + ++ + PE + K + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN + E +A L P +AS
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQGLR------LYRPHLAS----- 247
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSD 590
E++ I +C ++R + + I+++ +
Sbjct: 248 ---EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 132
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 251
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 252 QRPXLREVLE 261
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 53 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIH 167
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 227
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 228 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 273
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 274 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 48/222 (21%)
Query: 317 EVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDA-----FDTEVRRLGRLRHSN 368
E+LG GG+ + A + V V V R + +ARD F E + L H
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLR----ADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 369 VLA------------PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
++A PL Y +V EY+ G +L ++H + GP +T ++
Sbjct: 91 IVAVYDTGEAETPAGPLPY--------IVMEYVDGVTLRDIVHTE-GP----MTPKRAIE 137
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLA 472
++ + + + H + H ++K +NI IS N + +FG I NS
Sbjct: 138 VIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 473 QALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
A+ Y +PE + V + DVY LG ++ E+LTG+ P
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 351 RDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELT 410
R F E +G+ H N++ ++ ++V EY+ GSL L + G + T
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG----QFT 122
Query: 411 WPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSAN 470
+ +++GI+ G+ YL +++ ++ H +L + NI I+ +S+FG ++
Sbjct: 123 VIQLVGMLRGISAGMKYL-SDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 471 LA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGI 522
A + + APEAI K T DV+ GI++ E+++ G+ P +TN +
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD--- 235
Query: 523 DVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
V A EG + S + P + QL+ C Q + R + E V
Sbjct: 236 -----VIKAVEEGY-------RLPSPMDCPAALYQLM---LDCWQKERNSRPKFDEIV 278
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 58 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 172
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 173 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 232
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 233 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 278
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 279 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIH 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 114
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 172
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 173 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 226
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 264
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ A Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 247 QRPMLREVLE 256
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V E + GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 134 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSN 183
Query: 453 NEPLISEFGFYTMIN-------SANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ + + + +PEAI K T DV+ GI++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 244 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 285
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 92
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 150
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 151 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 242
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 114
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 172
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 173 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 264
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR + L H N++ LV EY GG +
Sbjct: 43 AVRIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 395 L-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPEN 453
YL+ R + AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 101 FDYLVAHGRMKEKE-----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADM 150
Query: 454 EPLISEFGF---YTMINSANLAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGK 509
I++FGF +T N + Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 510 FP 511
P
Sbjct: 211 LP 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ + Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 310 DLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSN 368
D+ K +E+LG G A+ + +G VK +++ + +R EV L + + +
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 369 VLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ L + D + LV+E + GGS+L + + + E + ++V+ +A + +
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-----RVVRDVAAALDF 126
Query: 428 LHTELAHLDLPHGNLKSSNIFI-SPEN-EPL-ISEFGF---------YTMINSANLAQAL 475
LHT+ + H +LK NI SPE P+ I +F T I + L
Sbjct: 127 LHTK----GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 476 FA--YKAPEAI-----QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ Y APE + Q+ +CD++ LG+++ +L+G P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 108/279 (38%), Gaps = 33/279 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 126
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + ++ + PE + K + K
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN A ++G L P +AS
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSE--------TAEHIAQG--LRLYRPHLAS----- 231
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSDG 591
E++ I +C ++R + + I+++ +
Sbjct: 232 ---EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 267
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 17/217 (7%)
Query: 301 GQKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR 360
G+K + L D LG G G+ Y A ++ ++ + + + + ++RR
Sbjct: 1 GKKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 58
Query: 361 ----LGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
LRH N+L Y + L+ EY P G++ L + DE
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTAT 113
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLA--QA 474
+ +A + Y H++ + H ++K N+ + E I++FG+ S+
Sbjct: 114 YITELANALSYCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG 169
Query: 475 LFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
Y PE I+ K D++ LG++ E L GK P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 107/274 (39%), Gaps = 33/274 (12%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 127
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + ++ + PE + K + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN A ++G L P +AS
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE--------TAEHIAQG--LRLYRPHLAS----- 232
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E++ I +C ++R + + I+++
Sbjct: 233 ---EKVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)
Query: 336 VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
++V +K +K + R F E +G+ H N++ ++ ++V E + GSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLHTELAHLDLPHGNLKSSNIFISPE 452
L HD A+ ++Q G+ RGI L+ + H +L + NI I+
Sbjct: 134 DSFLR-----KHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 453 NEPLISEFGFYTMINSANLA-------QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI 505
+S+FG ++ A + + +PEAI K T DV+ GI++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 506 LT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRA 564
++ G+ P ++N + V A EG + + P + QL+
Sbjct: 244 MSYGERPYWEMSNQD--------VIKAVDEGY-------RLPPPMDCPAALYQLM---LD 285
Query: 565 CTQSDPEQRLEMREAVRRIVEIQQSDGNMDARTSQNILPT 604
C Q D R + + V + ++ ++ G++ TS P+
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPS 325
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 99
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 157
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 158 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 211
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 249
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 108/278 (38%), Gaps = 33/278 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 133
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + ++ + PE + K + K
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN + E +A L P +AS
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQGLR------LYRPHLAS----- 238
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSD 590
E++ I +C ++R + + I+++ +
Sbjct: 239 ---EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 273
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 134
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 135 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFD 190
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 191 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 247
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 248 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 293
Query: 585 EI 586
I
Sbjct: 294 AI 295
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 108
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 166
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 167 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 222
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 116
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 174
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 175 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 230
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 266
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 118
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 176
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 177 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ S + ++ + ++RR LRH N+L
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ E+ P G L L H ++ +A + Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 134
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H ++K N+ + + E I++FG+ +++ +L + Y PE I+
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 491 PKCDVYCLGIIILEILTGKFP 511
K D++C G++ E L G P
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPP 212
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 92
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 150
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 151 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 242
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 80 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 139
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 140 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 192
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 193 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 305
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 306 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 351
Query: 585 EI 586
I
Sbjct: 352 AI 353
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 81
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 139
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 140 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 193
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 133
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 134 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 189
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 246
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 247 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 585 EI 586
I
Sbjct: 293 AI 294
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 88
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 146
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 147 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 200
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 84
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 142
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 143 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 196
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ S + ++ + ++RR LRH N+L
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ E+ P G L L H ++ +A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H ++K N+ + + E I++FG+ +++ +L + Y PE I+
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 491 PKCDVYCLGIIILEILTGKFP 511
K D++C G++ E L G P
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPP 211
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 85
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 143
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 144 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 235
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 27 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 146 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 253
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 254 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 307 GLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR 365
G P L+ + +G G G A G V VK M R+ EV + +
Sbjct: 41 GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100
Query: 366 HSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGI 425
H NV+ + +E ++ E++ GG+L ++ S L + + + + +
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV------SQVRLNEEQIATVCEAVLQAL 154
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAP 481
YLH + + H ++KS +I ++ + +S+FGF I+ + + AP
Sbjct: 155 AYLHAQ----GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
E I + D++ LGI+++E++ G+ P
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ S + ++ + ++RR LRH N+L
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ E+ P G L L H ++ +A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H ++K N+ + + E I++FG+ +++ +L + Y PE I+
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 491 PKCDVYCLGIIILEILTGKFP 511
K D++C G++ E L G P
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPP 211
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 159
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 217
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 218 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 273
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 309
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 26 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 85
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 86 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 138
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 139 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 194
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 195 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 251
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 252 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 297
Query: 585 EI 586
I
Sbjct: 298 AI 299
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 46/278 (16%)
Query: 317 EVLGNGGLG-----SSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
E LG G G + YK + + +++ + S M + E+ L LRH +++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRV-EREISYLKLLRHPHIIK 73
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ ++V EY G Y++ R +T + Q I I Y H
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIVEKKR------MTEDEGRRFFQQIICAIEYCHRH 127
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSGK 488
+ H +LK N+ + I++FG ++ N + Y APE I +GK
Sbjct: 128 ----KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-NGK 182
Query: 489 VT--PKCDVYCLGIIILEILTGKFP--SQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPE 544
+ P+ DV+ GI++ +L G+ P +++ N ++ +V F
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFL----------- 231
Query: 545 IASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
SPG + R +DP QR+ ++E +RR
Sbjct: 232 ------SPGAQSLI----RRMIVADPMQRITIQE-IRR 258
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 134
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 135 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 190
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 191 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 247
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 248 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 293
Query: 585 EI 586
I
Sbjct: 294 AI 295
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 93
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 151
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPEAI 484
H+ + H ++K N+ + P+ L + +FG + + Y+APE I
Sbjct: 152 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 485 -QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
+ T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 243
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+V+GNG G Y+A + D G V +K++ + + E++ + +L H N++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLDHCNIVRLRY 80
Query: 375 YHYRTDEKL------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ Y + EK LV +Y+P H R + + +L + Q + R + Y+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMI-----NSANLAQALFAYKAPE 482
H+ + H ++K N+ + P+ L + +FG + N + + Y+APE
Sbjct: 139 HS----FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T DV+ G ++ E+L G Q + G+ G+D
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVD 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ EY
Sbjct: 112 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 226
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 287 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 332
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 333 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 318 VLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAPL 373
VLG G G A + + G VK +K+ + D + TE R L R+ L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 374 AYHYRTDEKLL-VYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQG-IARGIGYLHTE 431
++T ++L V E++ GG L++ H + DE AR + I + +LH +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMF--HIQKSRRFDE----ARARFYAAEIISALMFLHDK 143
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSG 487
+ + +LK N+ + E +++FG + A F Y APE +Q
Sbjct: 144 ----GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 488 KVTPKCDVYCLGIIILEILTGKFPSQ 513
P D + +G+++ E+L G P +
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARL 415
EVR + L H N++ LV EY GG + YL+ R + AR
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARA 118
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLA 472
K Q I + Y H + + H +LK+ N+ + + I++FGF +T+ N +
Sbjct: 119 KFRQ-IVSAVQYCHQKY----IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF 173
Query: 473 QALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGKFP 511
Y APE Q K P+ DV+ LG+I+ +++G P
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 108/279 (38%), Gaps = 33/279 (11%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYR 378
LG G G V +K +KE S M+ D F E + + L H ++ +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
++ EY+ G LL L R + L++ + + + YL ++
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESK----QFL 122
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAPEAIQSGKVTPKC 493
H +L + N ++ + +S+FG + ++ + PE + K + K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 494 DVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
D++ G+++ EI + GK P + TN + E +A L P +AS
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQGLR------LYRPHLAS----- 227
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSDG 591
E++ I +C ++R + + I+++ +
Sbjct: 228 ---EKVYTIMYSCWHEKADERPTFKILLSNILDVMDEES 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 133
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 134 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 189
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 246
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 247 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 585 EI 586
I
Sbjct: 293 AI 294
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTV----VVKRMKESSAMARDAFDTEVRR--LGRLRHSNVL 370
+VLG G G + G +K +K+++ RD T++ R L + H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L Y ++T+ KL L+ +++ GG L L + + +++ + + +A + +LH
Sbjct: 90 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 143
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYT-MINSANLAQAL---FAYKAPEAIQ 485
+ L + + +LK NI + E +++FG I+ A + Y APE +
Sbjct: 144 S----LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQ 513
T D + G+++ E+LTG P Q
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 131
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ +L ++ H +L + N + + +++FG +
Sbjct: 132 DLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 187
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 188 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 244
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 245 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 290
Query: 585 EI 586
I
Sbjct: 291 AI 292
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +++ +A+D TE R L RH
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-F 66
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R + + AR + I + YL
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYL 121
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+ D+ + ++K N+ + + I++FG S F Y APE +
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTV----VVKRMKESSAMARDAFDTEVRR--LGRLRHSNVL 370
+VLG G G + G +K +K+++ RD T++ R L + H ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L Y ++T+ KL L+ +++ GG L L + + +++ + + +A + +LH
Sbjct: 91 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 144
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYT-MINSANLAQAL---FAYKAPEAIQ 485
+ L + + +LK NI + E +++FG I+ A + Y APE +
Sbjct: 145 S----LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQ 513
T D + G+++ E+LTG P Q
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 119/302 (39%), Gaps = 45/302 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDT 356
Q V G L+ EV+G G G Y + D + VK + + + F T
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGD-RGPSHDELTWPARL 415
E + H NVL+ L R++ LV L Y+ HGD R +E P
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNPTVK 132
Query: 416 KIV---QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YT 464
++ +A+G+ YL ++ H +L + N + + +++FG
Sbjct: 133 DLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXX 188
Query: 465 MINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDV 524
+++ A+ + A E++Q+ K T K DV+ G+++ E++T P N D+
Sbjct: 189 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN---TFDI 245
Query: 525 VEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIV 584
++ +GR LL PE + L E+ C E R E V RI
Sbjct: 246 TVYLL----QGR--RLLQPEYCP--------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 291
Query: 585 EI 586
I
Sbjct: 292 AI 293
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAP 372
++LG G G A G +K +++ +A+D TE R L RH L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 74
Query: 373 LAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L Y ++T ++L V EY GG L + L +R + + AR + I + YLH+
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYLHSR 129
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSG 487
D+ + ++K N+ + + I++FG S F Y APE ++
Sbjct: 130 ----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 488 KVTPKCDVYCLGIIILEILTGKFP 511
D + LG+++ E++ G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTAT---YITELANALSYCHSK--- 144
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 204 VDLWSLGVLCYEFLVGKPP 222
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 247 QRPMLREVLE 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTV----VVKRMKESSAMARDAFDTEVRR--LGRLRHSNVL 370
+VLG G G + G +K +K+++ RD T++ R L + H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L Y ++T+ KL L+ +++ GG L L + + +++ + + +A + +LH
Sbjct: 90 K-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 143
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYT-MINSANLAQAL---FAYKAPEAIQ 485
+ L + + +LK NI + E +++FG I+ A + Y APE +
Sbjct: 144 S----LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQ 513
T D + G+++ E+LTG P Q
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 132
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 251
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 252 QRPMLREVLE 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 247 QRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 132
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 251
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 252 QRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 249
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 250 QRPMLREVLE 259
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL 394
V ++ K SS++ + EVR + L H N++ LV EY GG +
Sbjct: 36 AVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENE 454
L E AR K Q I + Y H + + H +LK+ N+ + +
Sbjct: 94 FDYLVAHGWMKEKE----ARAKFRQ-IVSAVQYCHQKF----IVHRDLKAENLLLDADMN 144
Query: 455 PLISEFGF---YTMINSANLAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGKF 510
I++FGF +T N + Y APE Q K P+ DV+ LG+I+ +++G
Sbjct: 145 IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 511 P 511
P
Sbjct: 205 P 205
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 20 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 139 AYLNAN----KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 246
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + LLE+ R C Q +P+ R E + I E
Sbjct: 247 DKPD-------NCP---DMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A D D +E+ + + +H N++ L + ++ EY
Sbjct: 66 EAVTVAVKMLKDD-ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 128
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 247
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 248 QRPMLREVLE 257
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 26 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 145 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 252
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 253 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQR---TATYITELANALSYCHSK--- 153
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 318 VLGNGGLGSSYKAMMADGVT---VVVKRMKESSAMARDAFDT--EVRRLGRLRHSNVLAP 372
+LG G G K D +T VK + ++SA +D EV L +L H N++
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 373 LAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ +V E GG L ++ R HD AR I++ + GI Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD----AAR--IIKQVFSGITYMHKH 140
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
++ H +LK NI + + + I +FG T + Y APE ++
Sbjct: 141 ----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFP----SQY-----LTNGNGGIDVVEW 527
G KCDV+ G+I+ +L+G P ++Y + G D+ +W
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 129
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 248
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 249 QRPMLREVLE 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G + L + DE + +A + Y H++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL--QKLSKFDE---QRTATYITELANALSYCHSK--- 132
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +++ +A+D TE R L RH
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-F 66
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R + + AR + I + YL
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYL 121
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+ D+ + ++K N+ + + I++FG S F Y APE +
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 118/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + +L H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKLNHQNIV 97
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 158 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 264
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 265 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAP 372
++LG G G A G +K +++ +A+D TE R L RH L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTA 69
Query: 373 LAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L Y ++T ++L V EY GG L + L +R + + AR + I + YLH+
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYLHSR 124
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSG 487
D+ + ++K N+ + + I++FG S F Y APE ++
Sbjct: 125 ----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 488 KVTPKCDVYCLGIIILEILTGKFP 511
D + LG+++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +++ +A+D TE R L RH
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-F 66
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R + + AR + I + YL
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYL 121
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+ D+ + ++K N+ + + I++FG S F Y APE +
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 20 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 139 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 246
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 247 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +++ +A+D TE R L RH
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-F 69
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R + + AR + I + YL
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYL 124
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+ D+ + ++K N+ + + I++FG S F Y APE +
Sbjct: 125 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 180
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 50/304 (16%)
Query: 317 EVLGNGGLG-----SSYKAMMADG-VTVVVKRMKESSAMA-RDAFDTEVRRLGRL-RHSN 368
+ LG G G ++Y + +D +TV VK +K S+ + R+A +E++ L L H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL------------- 415
++ L L++ EY G LL L R T PA +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-NSANL--- 471
+A+G+ +L ++ + H +L + NI ++ I +FG I N +N
Sbjct: 172 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 472 --AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
A+ + APE+I + T + DV+ GI + E+ + G P G+ V
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 280
Query: 529 ASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG +L PE ++P EM +I + C +DP +R ++ V +++E Q
Sbjct: 281 YKMIKEG--FRMLSPE-----HAPAEM---YDIMKTCWDADPLKRPTFKQIV-QLIEKQI 329
Query: 589 SDGN 592
S+
Sbjct: 330 SEST 333
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 37/280 (13%)
Query: 319 LGNGGLGSSYKAMMAD-GVTVVVKRMKES--SAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
+G G G +K D G V +K+ ES + + E+R L +L+H N++ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH--DELTWPARLKIVQGIARGIGYLHTEL 432
R LV+EY L L RG P H +TW + + + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCHKH- 121
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI----NSANLAQALFAYKAPE-AIQSG 487
+ H ++K NI I+ + + +FGF ++ + + A Y++PE +
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 488 KVTPKCDVYCLGIIILEILTGK--FPSQ------YLTNGNGGIDVVEWVASAFSEGRV-- 537
+ P DV+ +G + E+L+G +P + YL G D++ FS +
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG-DLIPRHQQVFSTNQYFS 237
Query: 538 -TDLLDPEIAS--STNSPGEMEQLLEIGRACTQSDPEQRL 574
+ DPE P L + + C DP +RL
Sbjct: 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERL 277
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G + L + DE + +A + Y H++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTAT---YITELANALSYCHSK--- 132
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 249
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 250 QRPMLREVLE 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 247 QRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 19/268 (7%)
Query: 301 GQKGVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR 360
G K + L D LG G G+ Y A ++ ++ + + + + ++RR
Sbjct: 4 GSKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 361 ----LGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
LRH N+L Y + L+ EY P G++ L + DE
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTAT 116
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--A 474
+ +A + Y H++ + H ++K N+ + E I++FG+ S+
Sbjct: 117 YITELANALSYCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 172
Query: 475 LFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAF 532
Y PE I+ K D++ LG++ E L GK F + I VE+ F
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 232
Query: 533 SEGRVTDLLDPEIASSTNSPGEMEQLLE 560
DL+ + + + + ++LE
Sbjct: 233 VTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 24 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 143 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 250
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 251 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 118/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + +L H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKLNHQNIV 111
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 172 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 278
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 279 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 27 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 146 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 253
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 254 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 43/279 (15%)
Query: 317 EVLGNGGLGS-SYKAMMADG---VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLA 371
+++G+G G Y + G V V +K +K + R F +E +G+ H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLH 429
R ++V EY+ GSL L +HD + I+Q G+ RG+G
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLR-----THD-----GQFTIMQLVGMLRGVGAGM 164
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-------SANLAQALFAYKAPE 482
L+ L H +L + N+ + +S+FG ++ + + + APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLL 541
AI + DV+ G+++ E+L G+ P +TN + V S+ EG
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--------VISSVEEGY----- 271
Query: 542 DPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
+ + P + QL+ C D QR + V
Sbjct: 272 --RLPAPMGCPHALHQLM---LDCWHKDRAQRPRFSQIV 305
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 317 EVLGNGGLGSSYKAMM----ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNV 369
++LG G G K ++ A G +K +++ +A+D TE R L RH
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-F 66
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L L Y ++T ++L V EY GG L + L +R + + AR + I + YL
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER----ARFYGAE-IVSALEYL 121
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+ D+ + ++K N+ + + I++FG S F Y APE +
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 26 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 145 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 252
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 253 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 50/302 (16%)
Query: 317 EVLGNGGLG-----SSYKAMMADG-VTVVVKRMKESSAMA-RDAFDTEVRRLGRL-RHSN 368
+ LG G G ++Y + +D +TV VK +K S+ + R+A +E++ L L H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL------------- 415
++ L L++ EY G LL L R T PA +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-NSANL--- 471
+A+G+ +L ++ + H +L + NI ++ I +FG I N +N
Sbjct: 149 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 472 --AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
A+ + APE+I + T + DV+ GI + E+ + G P G+ V
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 257
Query: 529 ASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG +L PE ++P EM +I + C +DP +R ++ V +++E Q
Sbjct: 258 YKMIKEG--FRMLSPE-----HAPAEM---YDIMKTCWDADPLKRPTFKQIV-QLIEKQI 306
Query: 589 SD 590
S+
Sbjct: 307 SE 308
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQR---TATYITELANALSYCHSK--- 153
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 493 CDVYCLGIIILEILTGKFP 511
D++ LG++ E L GK P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 318 VLGNGGLGSSYKAMMADGVT---VVVKRMKESSAMARDAFDT--EVRRLGRLRHSNVLAP 372
+LG G G K D +T VK + ++SA +D EV L +L H N++
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 373 LAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ +V E GG L ++ R HD AR I++ + GI Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD----AAR--IIKQVFSGITYMHKH 140
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
++ H +LK NI + + + I +FG T + Y APE ++
Sbjct: 141 ----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFP----SQY-----LTNGNGGIDVVEW 527
G KCDV+ G+I+ +L+G P ++Y + G D+ +W
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 126
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 127 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 245
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 246 QRPMLREVLE 255
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 50/302 (16%)
Query: 317 EVLGNGGLG-----SSYKAMMADG-VTVVVKRMKESSAMA-RDAFDTEVRRLGRL-RHSN 368
+ LG G G ++Y + +D +TV VK +K S+ + R+A +E++ L L H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL------------- 415
++ L L++ EY G LL L R T PA +
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-NSANL--- 471
+A+G+ +L ++ + H +L + NI ++ I +FG I N +N
Sbjct: 165 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 472 --AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
A+ + APE+I + T + DV+ GI + E+ + G P G+ V
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 273
Query: 529 ASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG +L PE ++P EM +I + C +DP +R ++ V +++E Q
Sbjct: 274 YKMIKEG--FRMLSPE-----HAPAEM---YDIMKTCWDADPLKRPTFKQIV-QLIEKQI 322
Query: 589 SD 590
S+
Sbjct: 323 SE 324
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 49/288 (17%)
Query: 318 VLGNGGLGSSYKAMMADG----VTVVVKRMKESSAMAR-DAFDTEVRRLGRLRHSNVLAP 372
V+G G G Y D + +K + + M + +AF E + L H NVLA
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGD-----RGPSHDELTWPARLKIVQGIARGIGY 427
+ +L E +P L Y+ HGD R P + T + +ARG+ Y
Sbjct: 88 IGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVARGMEY 139
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--------YTMINSANLAQALFAYK 479
L A H +L + N + +++FG Y + A+ +
Sbjct: 140 L----AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
A E++Q+ + T K DV+ G+++ E+LT G P +++ D+ ++A +GR
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----DPFDLTHFLA----QGR-- 245
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
L PE + L ++ + C ++DP R R V + +I
Sbjct: 246 RLPQPEYCPDS--------LYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 128
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA--NLAQALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ + Y PE I+ K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 247
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 248 QRPMLREVLE 257
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 43/279 (15%)
Query: 317 EVLGNGGLGS-SYKAMMADG---VTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLA 371
+++G+G G Y + G V V +K +K + R F +E +G+ H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQ--GIARGIGYLH 429
R ++V EY+ GSL L +HD + I+Q G+ RG+G
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLR-----THD-----GQFTIMQLVGMLRGVGAGM 164
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-------SANLAQALFAYKAPE 482
L+ L H +L + N+ + +S+FG ++ + + + APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLL 541
AI + DV+ G+++ E+L G+ P +TN + V S+ EG
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--------VISSVEEGY----- 271
Query: 542 DPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
+ + P + QL+ C D QR + V
Sbjct: 272 --RLPAPMGCPHALHQLM---LDCWHKDRAQRPRFSQIV 305
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 249
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 250 QRPMLREVLE 259
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 312 MKAAAEVLGNG-GLGSSYKAMMAD----GVTVVVKRMKESSAMARDA---FDTEVRRLGR 363
+K VLG+ G+G+ K + + G V VK + + D E++ L
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 364 LRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIAR 423
RH +++ + +V EY+ GG L D H + ++ Q I
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELF-----DYICKHGRVEEMEARRLFQQILS 122
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
+ Y H + + H +LK N+ + I++FG M++ + Y A
Sbjct: 123 AVDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 178
Query: 481 PEAIQSGKVT--PKCDVYCLGIIILEILTGKFP 511
PE I SG++ P+ D++ G+I+ +L G P
Sbjct: 179 PEVI-SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 247 QRPMLREVLE 256
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 55 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 174 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 229
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 281
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 282 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 129
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I+ FG+ S+ Y PE I+ K
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 248
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 249 QRPMLREVLE 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 33 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 152 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 259
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 260 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 50/304 (16%)
Query: 317 EVLGNGGLG-----SSYKAMMADG-VTVVVKRMKESSAMA-RDAFDTEVRRLGRL-RHSN 368
+ LG G G ++Y + +D +TV VK +K S+ + R+A +E++ L L H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL------------- 415
++ L L++ EY G LL L R T PA +
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-NSANL--- 471
+A+G+ +L ++ + H +L + NI ++ I +FG I N +N
Sbjct: 167 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 472 --AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
A+ + APE+I + T + DV+ GI + E+ + G P G+ V
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 275
Query: 529 ASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG +L PE ++P EM +I + C +DP +R ++ V +++E Q
Sbjct: 276 YKMIKEG--FRMLSPE-----HAPAEM---YDIMKTCWDADPLKRPTFKQIV-QLIEKQI 324
Query: 589 SDGN 592
S+
Sbjct: 325 SEST 328
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 329 KAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAYHYRTDEKLLVYE 387
K+ A V ++ KRM+ ++ E+ L H N++ + LV E
Sbjct: 34 KSNQAFAVKIISKRMEANTQ-------KEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86
Query: 388 YIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNI 447
+ GG L + + S E ++ I++ + + ++H + + H +LK N+
Sbjct: 87 LLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHD----VGVVHRDLKPENL 137
Query: 448 FISPENEPL---ISEFGFYTMINSAN--LAQALFA--YKAPEAIQSGKVTPKCDVYCLGI 500
+ EN+ L I +FGF + N L F Y APE + CD++ LG+
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGV 197
Query: 501 IILEILTGKFPSQ 513
I+ +L+G+ P Q
Sbjct: 198 ILYTMLSGQVPFQ 210
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E +G G G YKA + G V +KR++ E + A E+ L L H N+++ +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI-REISLLKELHHPNIVSLI 85
Query: 374 AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKI-VQGIARGIGYLHTEL 432
+ LV+E++ L +L ++ D +++KI + + RG+ + H
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQD-----SQIKIYLYQLLRGVAHCHQH- 138
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQ-SG 487
+ H +LK N+ I+ + +++FG F + S Y+AP+ + S
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 488 KVTPKCDVYCLGIIILEILTGK--FP 511
K + D++ +G I E++TGK FP
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 23 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 142 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 249
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 250 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 50/304 (16%)
Query: 317 EVLGNGGLG-----SSYKAMMADG-VTVVVKRMKESSAMA-RDAFDTEVRRLGRL-RHSN 368
+ LG G G ++Y + +D +TV VK +K S+ + R+A +E++ L L H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL------------- 415
++ L L++ EY G LL L R T PA +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI-NSANL--- 471
+A+G+ +L ++ + H +L + NI ++ I +FG I N +N
Sbjct: 172 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 472 --AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
A+ + APE+I + T + DV+ GI + E+ + G P G+ V
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 280
Query: 529 ASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG +L PE ++P EM +I + C +DP +R ++ V +++E Q
Sbjct: 281 YKMIKEG--FRMLSPE-----HAPAEM---YDIMKTCWDADPLKRPTFKQIV-QLIEKQI 329
Query: 589 SDGN 592
S+
Sbjct: 330 SEST 333
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E +G G G YKA + G V +KR++ E + A E+ L L H N+++ +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI-REISLLKELHHPNIVSLI 85
Query: 374 AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKI-VQGIARGIGYLHTEL 432
+ LV+E++ L +L ++ D +++KI + + RG+ + H
Sbjct: 86 DVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQD-----SQIKIYLYQLLRGVAHCHQH- 138
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQ-SG 487
+ H +LK N+ I+ + +++FG F + S Y+AP+ + S
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 488 KVTPKCDVYCLGIIILEILTGK--FP 511
K + D++ +G I E++TGK FP
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDE---QRTATYITELANALSYCHSK--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA---NLAQALFAYKAPEAIQSGKVTP 491
+ H ++K N+ + E I++FG+ S+ +L L Y PE I+
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL-DYLPPEMIEGRMHDE 188
Query: 492 KCDVYCLGIIILEILTGKFP 511
K D++ LG++ E L GK P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPP 208
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 97
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 158 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 264
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 265 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 124
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I++FG+ S+ Y PE I+ K
Sbjct: 125 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 243
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 244 QRPMLREVLE 253
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
Y + L+ EY P G++ L + DE + +A + Y H++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDE---QRTATYITELANALSYCHSK--- 130
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTPK 492
+ H ++K N+ + E I+ FG+ S+ Y PE I+ K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 493 CDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
D++ LG++ E L GK F + I VE+ F DL+ + + +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 249
Query: 551 SPGEMEQLLE 560
+ ++LE
Sbjct: 250 QRPMLREVLE 259
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 43/287 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT-------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVL 370
LG G G Y+ + A GV V +K + E+++M R F E + +V+
Sbjct: 33 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQ---GIARGI 425
L + L++ E + G L L R + L P+ K++Q IA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYK 479
YL+ H +L + N ++ + I +FG I + + +
Sbjct: 152 AYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+PE+++ G T DV+ G+++ EI T + P Q L+N E V EG +
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGLL 259
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
D D N P + L E+ R C Q +P+ R E + I E
Sbjct: 260 DKPD-------NCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ Y
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIH 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 312 MKAAAEVLGNG-GLGSSYKAMMAD----GVTVVVKRMKESSAMARDA---FDTEVRRLGR 363
+K VLG+ G+G+ K + + G V VK + + D E++ L
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 364 LRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIAR 423
RH +++ + +V EY+ GG L D H + ++ Q I
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELF-----DYICKHGRVEEMEARRLFQQILS 122
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
+ Y H + + H +LK N+ + I++FG M++ + Y A
Sbjct: 123 AVDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAA 178
Query: 481 PEAIQSGKVT--PKCDVYCLGIIILEILTGKFP 511
PE I SG++ P+ D++ G+I+ +L G P
Sbjct: 179 PEVI-SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 96
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 157 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 263
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 264 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 304
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 96
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 157 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 263
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 264 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 304
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 97
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 158 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 264
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 265 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 139
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + + Y APE + K CD
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 200 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 249
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 250 -EEVKMLIRNLLKTEPTQRMTITE 272
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 319 LGNGGLGSSYKAM-MADGVTVVVKRM-KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG+G G + + G+ V+K + K+ S + + + E+ L L H N++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 377 YRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+V E GG LL + RG + L+ ++++ + + Y H++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKA---LSEGYVAELMKQMMNALAYFHSQ--- 143
Query: 435 LDLPHGNLKSSNIFI---SPENEPLISEFGFYTMINS---ANLAQALFAYKAPEAIQSGK 488
+ H +LK NI SP + I +FG + S + A Y APE +
Sbjct: 144 -HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD- 201
Query: 489 VTPKCDVYCLGIIILEILTGKFP 511
VT KCD++ G+++ +LTG P
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 111
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 172 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 278
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 279 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 88
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 149 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 255
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 256 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 296
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 50/285 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 175
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 236 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 278
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVR---RIVEIQQSDGNMD 594
E+ ++ R C + P QR ++ V RIV + + +D
Sbjct: 279 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEXLD 320
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 43/285 (15%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 113
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 174 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 280
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRI 583
+DP N PG + +++ C Q PE R + RI
Sbjct: 281 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERI 316
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 17/179 (9%)
Query: 339 VVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLL-YL 397
++ R K S E++ L RH +++ + +V EY+ GG L Y+
Sbjct: 48 ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI 107
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLI 457
R L ++ Q I G+ Y H + + H +LK N+ + I
Sbjct: 108 CKNGR------LDEKESRRLFQQILSGVDYCHRHM----VVHRDLKPENVLLDAHMNAKI 157
Query: 458 SEFGFYTMINSANLAQALFA---YKAPEAIQSGKVT--PKCDVYCLGIIILEILTGKFP 511
++FG M++ + Y APE I SG++ P+ D++ G+I+ +L G P
Sbjct: 158 ADFGLSNMMSDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 103
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 164 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 270
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 271 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 311
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 43/285 (15%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 123
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 184 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 290
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRI 583
+DP N PG + +++ C Q PE R + RI
Sbjct: 291 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERI 326
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 48/276 (17%)
Query: 334 DGVTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIP 390
+ VTV VK +K+ A +D D +E+ + + +H N++ L + ++ Y
Sbjct: 66 EAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 391 GGSLLYLLHGDRGP----SHD-------ELTWPARLKIVQGIARGIGYLHTELAHLDLPH 439
G+L L R P S+D ++T+ + +ARG+ YL ++ H
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----H 180
Query: 440 GNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKC 493
+L + N+ ++ N I++FG IN+ + + + APEA+ T +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 494 DVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTN 550
DV+ G+++ EI T +P GI V E + EG D + A+ TN
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP---------GIPVEE-LFKLLKEGHRMD----KPANCTN 286
Query: 551 SPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+L + R C + P QR ++ V + I
Sbjct: 287 ------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 116/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 114
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A A +
Sbjct: 175 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 281
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 282 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 322
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 116/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIV 137
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A A +
Sbjct: 198 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 304
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 305 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 345
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 191
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 251
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 252 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 301
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 302 -EEVKMLIRNLLKTEPTQRMTITE 324
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKESSA-MARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ +K + + +G + V +K +++ S + A + +G L H++++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQGIARGIGYL 428
L + +L V +Y+P GSLL + RG + L W + IA+G+ YL
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 131
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YKAP 481
+ H NL + N+ + ++ +++FG ++ + Q L++ + A
Sbjct: 132 EEH----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD-KQLLYSEAKTPIKWMAL 186
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILT 507
E+I GK T + DV+ G+ + E++T
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 185
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 246 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 295
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 296 -EEVKMLIRNLLKTEPTQRMTITE 318
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKESSA-MARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ +K + + +G + V +K +++ S + A + +G L H++++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE--LTWPARLKIVQGIARGIGYL 428
L + +L V +Y+P GSLL + RG + L W + IA+G+ YL
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 149
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL------AQALFAYKAPE 482
+ H NL + N+ + ++ +++FG ++ + A+ + A E
Sbjct: 150 EEH----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I GK T + DV+ G+ + E++T
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 50/285 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 175
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 236 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 278
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVR---RIVEIQQSDGNMD 594
E+ ++ R C + P QR ++ V RIV + + +D
Sbjct: 279 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLD 320
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 98/251 (39%), Gaps = 19/251 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHG-DRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
Y + L+ EY P G++ L R T+ + +A + Y H++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALSYCHSK-- 131
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQ--ALFAYKAPEAIQSGKVTP 491
+ H ++K N+ + E I++FG+ S+ Y PE I+
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 492 KCDVYCLGIIILEILTG--KFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASST 549
K D++ LG++ E L G F + I VE+ F DL+ + +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNA 249
Query: 550 NSPGEMEQLLE 560
+ + ++LE
Sbjct: 250 SQRLTLAEVLE 260
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 85/222 (38%), Gaps = 42/222 (18%)
Query: 318 VLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS--------- 367
VLG G G KA A D +K+++ + +EV L L H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASLNHQYVVRYYAAW 71
Query: 368 ----NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIAR 423
N + P+ + + EY G+L L+H + + W ++ + I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN---------------- 467
+ Y+H++ + H +LK NIFI I +FG ++
Sbjct: 128 ALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 468 SANLAQAL--FAYKAPEAIQ-SGKVTPKCDVYCLGIIILEIL 506
S NL A+ Y A E + +G K D+Y LGII E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 155
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 216 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 265
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 266 -EEVKMLIRNLLKTEPTQRMTITE 288
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 141
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 202 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 251
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 252 -EEVKMLIRNLLKTEPTQRMTITE 274
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 319 LGNGGLGSSYKAMMA------DGVTVVVKRMKESSAMARDAFD--TEVRRLGRLRHSNVL 370
LG+G G Y+ ++ + V VK + E + +D D E + + H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYS-EQDELDFLMEALIISKFNHQNIV 111
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG-PSH-DELTWPARLKIVQGIARGIGYL 428
+ ++ + ++ E + GG L L R PS L L + + IA G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 429 HTELAHLDLPHGNLKSSNIFIS---PENEPLISEFGFYTMINSAN------LAQALFAYK 479
E H H ++ + N ++ P I +FG I A+ A +
Sbjct: 172 --EENHFI--HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
PEA G T K D + G+++ EI + G P Y + N +V+E+V S GR
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ--EVLEFVTSG---GR-- 278
Query: 539 DLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
+DP N PG + +++ C Q PE R + RI Q
Sbjct: 279 --MDP----PKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 317 EVLGNGGLGS----SYKAMMADGVTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLA 371
EV+G G G KA V +K +K + R F +E +G+ H N++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ +++ E++ G+L L + G + T + +++GIA G+ YL
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDG----QFTVIQLVGMLRGIASGMRYL--- 134
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI--NSANLAQAL-------FAYKAPE 482
A + H +L + NI ++ +S+FG + NS++ + + APE
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTN 517
AI K T D + GI++ E+++ G+ P ++N
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 139
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 200 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 249
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 250 -EEVKMLIRNLLKTEPTQRMTITE 272
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 140
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 201 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 250
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 251 -EEVKMLIRNLLKTEPTQRMTITE 273
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARL 415
EVR + L H N++ L+ EY GG + YL+ R + AR
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE-----ARS 118
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL 475
K Q I + Y H + + H +LK+ N+ + + I++FGF A
Sbjct: 119 KFRQ-IVSAVQYCHQK----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173
Query: 476 FA---YKAPEAIQSGKVT-PKCDVYCLGIIILEILTGKFP 511
Y APE Q K P+ DV+ LG+I+ +++G P
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 146
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 207 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 256
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 257 -EEVKMLIRNLLKTEPTQRMTITE 279
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 147
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 208 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 257
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 258 -EEVKMLIRNLLKTEPTQRMTITE 280
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 145
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 206 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 255
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 256 -EEVKMLIRNLLKTEPTQRMTITE 278
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 141
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
++ LG+I+ +L G +P Y N G+ + + + G+ + +PE + +
Sbjct: 202 MWSLGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS----- 251
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR+ + E
Sbjct: 252 -EEVKMLIRNLLKTEPTQRMTITE 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 19/251 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRR----LGRLRHSNVLAPLA 374
LG G G+ Y A ++ ++ + + + + ++RR LRH N+L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHG-DRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
Y + L+ EY P G++ L R T+ + +A + Y H++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALSYCHSK-- 131
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA--NLAQALFAYKAPEAIQSGKVTP 491
+ H ++K N+ + E I++FG+ S+ + Y PE I+
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 492 KCDVYCLGIIILEILTG--KFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASST 549
K D++ LG++ E L G F + I VE+ F DL+ + +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNA 249
Query: 550 NSPGEMEQLLE 560
+ + ++LE
Sbjct: 250 SQRLTLAEVLE 260
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 314 AAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ E+LG G G +K A G+ + K +K ++ E+ + +L H+N++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDR--GPSHDELTWPARLKIVQGIARGIGYLHT 430
++ +LV EY+ GG L DR S++ LT + ++ I GI ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELF-----DRIIDESYN-LTELDTILFMKQICEGIRHMHQ 205
Query: 431 -ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQS 486
+ HLDL N+ N + I +FG + F + APE +
Sbjct: 206 MYILHLDLKPENILCVN---RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262
Query: 487 GKVTPKCDVYCLGIIILEILTGKFP 511
V+ D++ +G+I +L+G P
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 318 VLGNGGLGSSYKAMMADGVT------VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
VLG G G + D +T V+ + + +++ EV+ L +L H N++
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ LV E GG L D S + +I++ + GI Y+H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
+ H +LK N+ + +++ I +FG T ++ + Y APE +
Sbjct: 146 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 201
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWV 528
G KCDV+ G+I+ +L+G P NG D+++ V
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPP----FNGANEYDILKKV 239
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINAMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 318 VLGNGGLGSSYKAMMADGVT------VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
VLG G G + D +T V+ + + +++ EV+ L +L H N++
Sbjct: 56 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ LV E GG L D S + +I++ + GI Y+H
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
+ H +LK N+ + +++ I +FG T ++ + Y APE +
Sbjct: 169 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 224
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWV 528
G KCDV+ G+I+ +L+G P NG D+++ V
Sbjct: 225 -GTYDEKCDVWSTGVILYILLSGCPP----FNGANEYDILKKV 262
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 27/212 (12%)
Query: 317 EVLGNGGLGSSYKAMMADG--------VTVVVKRMKESSAMARDAFDTEVRRLGRLRHSN 368
+VLG G G + G + V+ K A + TE + L +R S
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 369 VLAPLAYHYRTDEKL-LVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
L L Y ++T+ KL L+ +YI GG L +L +R H+ + V I +
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY------VGEIVLALE 173
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYKAP 481
+LH L + + ++K NI + ++++FG + +A Y AP
Sbjct: 174 HLHK----LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 482 EAIQSGKV--TPKCDVYCLGIIILEILTGKFP 511
+ ++ G D + LG+++ E+LTG P
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 318 VLGNGGLGSSYKAMMADGVT------VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
VLG G G + D +T V+ + + +++ EV+ L +L H N++
Sbjct: 57 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ LV E GG L D S + +I++ + GI Y+H
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
+ H +LK N+ + +++ I +FG T ++ + Y APE +
Sbjct: 170 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 225
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWV 528
G KCDV+ G+I+ +L+G P NG D+++ V
Sbjct: 226 -GTYDEKCDVWSTGVILYILLSGCPP----FNGANEYDILKKV 263
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ ++E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDSELKILDFGLCRHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 357 EVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARL 415
EVR + L H N++ L+ EY GG + YL+ R + AR
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE-----ARS 115
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLA 472
K Q I + Y H + + H +LK+ N+ + + I++FGF +T+ +
Sbjct: 116 KFRQ-IVSAVQYCHQK----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF 170
Query: 473 QALFAYKAPEAIQSGKVT-PKCDVYCLGIIILEILTGKFP 511
Y APE Q K P+ DV+ LG+I+ +++G P
Sbjct: 171 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 52 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 111
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 167
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 168 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 227
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 228 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 270
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E+ ++ R C + P QR ++ V + I
Sbjct: 271 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 41 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 100
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 101 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 149
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 210 LGVLIYEMAAGYPP 223
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 315 AAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMAR---DAFDTEVRRLGRLRHSNVLA 371
+V+G G G V ++ M + AF E R + +S +
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L Y ++ D L +V EY+PGG L+ L+ P + A + + +G++H
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAIQ 485
+ +K N+ + +++FG +N + + A Y +PE ++
Sbjct: 198 D----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 486 S----GKVTPKCDVYCLGIIILEILTGKFP 511
S G +CD + +G+ + E+L G P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 315 AAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMAR---DAFDTEVRRLGRLRHSNVLA 371
+V+G G G V ++ M + AF E R + +S +
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L Y ++ D L +V EY+PGG L+ L+ P + A + + +G++H
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAIQ 485
+ +K N+ + +++FG +N + + A Y +PE ++
Sbjct: 198 D----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 486 S----GKVTPKCDVYCLGIIILEILTGKFP 511
S G +CD + +G+ + E+L G P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 49 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 108
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 164
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 165 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 224
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 225 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 267
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E+ ++ R C + P QR ++ V + I
Sbjct: 268 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 175
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 236 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 278
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E+ ++ R C + P QR ++ V + I
Sbjct: 279 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 43/272 (15%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 101 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 216
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276
Query: 496 YCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
+ G+++ EI T G P G+ V E + EG D +N E
Sbjct: 277 WSFGVLLWEIFTLGGSPYP-------GVPVEE-LFKLLKEGHRMD-------KPSNCTNE 321
Query: 555 MEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
+ ++ R C + P QR ++ V + I
Sbjct: 322 LYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 315 AAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMAR---DAFDTEVRRLGRLRHSNVLA 371
+V+G G G V ++ M + AF E R + +S +
Sbjct: 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L Y ++ D L +V EY+PGG L+ L+ P + A + + +G++H
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAIQ 485
+ +K N+ + +++FG +N + + A Y +PE ++
Sbjct: 193 D----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 486 S----GKVTPKCDVYCLGIIILEILTGKFP 511
S G +CD + +G+ + E+L G P
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 45 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 104
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 160
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 220
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 221 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 263
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E+ ++ R C + P QR ++ V + I
Sbjct: 264 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 53 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 112
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L R PSH ++L+ + +ARG+ YL A H +
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 168
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 169 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 228
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 229 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 271
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E+ ++ R C + P QR ++ V + I
Sbjct: 272 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 17 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 74
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 75 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ ++E I +FG +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDSELKILDFGLARHTD 178
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 70
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 124 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 318 VLGNGGLGSSYKAMMADGVT------VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
VLG G G + D +T V+ + + +++ EV+ L +L H N++
Sbjct: 39 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ LV E GG L D S + +I++ + GI Y+H
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
+ H +LK N+ + +++ I +FG T ++ + Y APE +
Sbjct: 152 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 207
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWV 528
G KCDV+ G+I+ +L+G P NG D+++ V
Sbjct: 208 -GTYDEKCDVWSTGVILYILLSGCPP----FNGANEYDILKKV 245
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 21 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 78
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 79 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ ++E I +FG +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDSELKILDFGLARHTD 182
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 68
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 121
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 122 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG ++ AD V ++ S + R+ E+ L H +V+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R LT P ++ I G YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL-HKRR----KALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + E I +FG T + + + Y APE + +
Sbjct: 135 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ DV+ +G I+ +L GK P +
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 20/206 (9%)
Query: 316 AEVLGNGGLGSSYKAM---MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
+ LG G G A+ + V V + MK + + E+ L H NV+
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKF 69
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + + L EY GG L + D G + P + + G+ YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQS 486
+ + H ++K N+ + + IS+FG T+ N + L Y APE ++
Sbjct: 123 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 487 GKVTPK-CDVYCLGIIILEILTGKFP 511
+ + DV+ GI++ +L G+ P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPE-AIQSGKVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 23/218 (10%)
Query: 317 EVLGNGGLGS----SYKAMMADGVTVVVKRMKES-SAMARDAFDTEVRRLGRLRHSNVLA 371
EV+G G G KA V +K +K + R F +E +G+ H N++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ +++ E++ G+L L + G + T + +++GIA G+ YL
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDG----QFTVIQLVGMLRGIASGMRYL--- 132
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI--NSANLA-------QALFAYKAPE 482
A + H +L + NI ++ +S+FG + NS++ + + APE
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
AI K T D + GI++ E+++ G+ P ++N +
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG ++ AD V ++ S + R+ E+ L H +V+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R LT P ++ I G YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL-HKRR----KALTEPEARYYLRQIVLGCQYLHRN--- 160
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + E I +FG T + + + Y APE + +
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ DV+ +G I+ +L GK P +
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG ++ AD V ++ S + R+ E+ L H +V+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R LT P ++ I G YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL-HKRR----KALTEPEARYYLRQIVLGCQYLHRN--- 158
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + E I +FG T + + + Y APE + +
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ DV+ +G I+ +L GK P +
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 365 RHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARG 424
+H N++ + LV E + GG LL + + S E ++ ++ I +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 425 IGYLHTELAHLDLPHGNLKSSNIFISPEN---EPL-ISEFGFYTMINSAN--LAQALFA- 477
+ YLH++ + H +LK SNI E+ E L I +FGF + + N L +
Sbjct: 134 VEYLHSQ----GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 478 -YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGR 536
+ APE ++ CD++ LGI++ +L G Y NG D E + + G+
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-----YTPFANGPSDTPEEILTRIGSGK 244
Query: 537 VTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
T S N E ++ DP QRL ++ ++
Sbjct: 245 FT-------LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDXELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 365 RHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARG 424
+H N++ + LV E + GG LL + + S E ++ ++ I +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 425 IGYLHTELAHLDLPHGNLKSSNIFISPEN---EPL-ISEFGFYTMINSAN--LAQALFA- 477
+ YLH++ + H +LK SNI E+ E L I +FGF + + N L +
Sbjct: 134 VEYLHSQ----GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 478 -YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGR 536
+ APE ++ CD++ LGI++ +L G Y NG D E + + G+
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-----YTPFANGPSDTPEEILTRIGSGK 244
Query: 537 VTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
T S N E ++ DP QRL ++ ++
Sbjct: 245 FT-------LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 84 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 138
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 139 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L Y ++ +
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L Y ++ +
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 78 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 132
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 133 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 22/206 (10%)
Query: 316 AEVLGNGGLGS---SYKAMMADGVT--VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVL 370
+ LG G G +Y V ++ K++ S M + + E+ L LRH +++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHII 77
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
DE ++V EY Y++ D+ + AR + Q I + Y H
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----AR-RFFQQIISAVEYCHR 131
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSG 487
+ H +LK N+ + I++FG ++ N + Y APE I SG
Sbjct: 132 H----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SG 186
Query: 488 KVT--PKCDVYCLGIIILEILTGKFP 511
K+ P+ DV+ G+I+ +L + P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L Y ++ +
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 40/282 (14%)
Query: 312 MKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMK-----ESSAMARDAFDTEVRRLGRLRH 366
M + LG+G G + D VT V + +K S + EV L L H
Sbjct: 38 MYQRVKKLGSGAYGEV--LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 367 SNVLAPLAYHYRTDEKLLVYEYIPGGSLL-YLLHGDRGPSHDELTWPARLKIVQGIARGI 425
N++ + LV E GG L ++H + D I++ + G+
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV------IIKQVLSGV 149
Query: 426 GYLHTELAHLDLPHGNLKSSNIFI-SPENEPLIS--EFGFYTMI-NSANLAQALFA--YK 479
YLH ++ H +LK N+ + S E + LI +FG + N + + L Y
Sbjct: 150 TYLHKH----NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILTGKFPS---------QYLTNGNGGIDVVEWVAS 530
APE ++ K KCDV+ +G+I+ +L G P + + G D EW
Sbjct: 206 APEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW--K 262
Query: 531 AFSEGRVTDLLDPEIASSTNSPGEMEQLLE---IGRACTQSD 569
SEG DL+ + + +Q LE I C++ +
Sbjct: 263 NVSEG-AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKE 303
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 74 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 129 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 22/206 (10%)
Query: 316 AEVLGNGGLGS---SYKAMMADGVT--VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVL 370
+ LG G G +Y V ++ K++ S M + + E+ L LRH +++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHII 76
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
DE ++V EY Y++ D+ + AR + Q I + Y H
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----AR-RFFQQIISAVEYCHR 130
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSG 487
+ H +LK N+ + I++FG ++ N + Y APE I SG
Sbjct: 131 H----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SG 185
Query: 488 KVT--PKCDVYCLGIIILEILTGKFP 511
K+ P+ DV+ G+I+ +L + P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTV--VVKRMKESSAM--ARDAFDTEVRRLGRL-RHSNVL 370
+V+G G G KA + DG+ + +KRMKE ++ RD F E+ L +L H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 86
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-----------ELTWPARLKIVQ 419
L L EY P G+LL L R D L+ L
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 420 GIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLAQALF 476
+ARG+ YL + H NL + NI + I++FG + + +
Sbjct: 147 DVARGMDYLSQK----QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 202
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ A E++ T DV+ G+++ EI++
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 20 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 77
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 78 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 38 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 95
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 96 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 200 DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 22/206 (10%)
Query: 316 AEVLGNGGLGS---SYKAMMADGVT--VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVL 370
+ LG G G +Y V ++ K++ S M + + E+ L LRH +++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHII 71
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
DE ++V EY Y++ D+ + AR + Q I + Y H
Sbjct: 72 KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----AR-RFFQQIISAVEYCHR 125
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSG 487
+ H +LK N+ + I++FG ++ N + Y APE I SG
Sbjct: 126 H----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SG 180
Query: 488 KVT--PKCDVYCLGIIILEILTGKFP 511
K+ P+ DV+ G+I+ +L + P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 22/206 (10%)
Query: 316 AEVLGNGGLGS---SYKAMMADGVT--VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVL 370
+ LG G G +Y V ++ K++ S M + + E+ L LRH +++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHII 67
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
DE ++V EY Y++ D+ + AR + Q I + Y H
Sbjct: 68 KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----AR-RFFQQIISAVEYCHR 121
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSG 487
+ H +LK N+ + I++FG ++ N + Y APE I SG
Sbjct: 122 H----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SG 176
Query: 488 KVT--PKCDVYCLGIIILEILTGKFP 511
K+ P+ DV+ G+I+ +L + P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 78 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 132
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 133 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
+V+GNG G ++A + + V +K++ + + E++ + ++H NV+ A+
Sbjct: 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK----NRELQIMRIVKHPNVVDLKAF 100
Query: 376 HY----RTDEKL--LVYEYIPGGSLLYLLHGDRGPSHDELTWPA---RLKIVQGIARGIG 426
Y + DE LV EY+P + R + + T P +L + Q + R +
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPET----VYRASRHYAKLKQTMPMLLIKLYMYQ-LLRSLA 155
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPL-ISEFGFYTMINSANLAQALFA---YKAPE 482
Y+H+ + + H ++K N+ + P + L + +FG ++ + + Y+APE
Sbjct: 156 YIHS----IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPE 211
Query: 483 AI-QSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID 523
I + T D++ G ++ E++ G Q L G GID
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQG----QPLFPGESGID 249
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 84 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 138
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 139 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 26 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 83
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 84 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDXELKILDFGLARHTD 187
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 74 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 129 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 317 EVLGNGGLGSSYKAMMADGVT-------VVVKRMKESS-AMARDAFDTEVRRLGRL-RHS 367
+VLG+G G A A G++ V VK +KE + + R+A +E++ + +L H
Sbjct: 51 KVLGSGAFGKVMNAT-AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGP-SHDE-----------------L 409
N++ L + L++EY G LL L R S DE L
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 410 TWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINS 468
T+ L +A+G+ +L + H +L + N+ ++ I +FG +++
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFK----SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 469 ANL-----AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+N A+ + APE++ G T K DV+ GI++ EI +
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 20 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 77
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 78 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 14 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 71
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 72 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 119
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 175
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 17 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 74
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 75 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDT--EVRRLGRL-RHSNVLAP 372
E +G+G GS +K + DG +KR K+ A + D + EV L +HS+V+
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTW--PARLK-IVQGIARGIGYLH 429
+ D L+ EY GGSL + ++ +++ A LK ++ + RG+ Y+H
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 430 TELAHLDLPHGNLKSSNIFISPENEP-------------------LISEFGFYTMINSAN 470
+ + L H ++K SNIFIS + P I + G T I+S
Sbjct: 131 S----MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 186
Query: 471 LAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIIL 503
+ + + A E +Q PK D++ L + ++
Sbjct: 187 VEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 27 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 84
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 85 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG ++ AD V ++ S + R+ E+ L H +V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R LT P ++ I G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRR----KALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + E I +FG T + + Y APE + +
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ DV+ +G I+ +L GK P +
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 27 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 84
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 85 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG ++ AD V ++ S + R+ E+ L H +V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R LT P ++ I G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRR----KALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + E I +FG T + + Y APE + +
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ DV+ +G I+ +L GK P +
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDT--EVRRLGRL-RHSNVLAP 372
E +G+G GS +K + DG +KR K+ A + D + EV L +HS+V+
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTW--PARLK-IVQGIARGIGYLH 429
+ D L+ EY GGSL + ++ +++ A LK ++ + RG+ Y+H
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 430 TELAHLDLPHGNLKSSNIFISPENEP-------------------LISEFGFYTMINSAN 470
+ + L H ++K SNIFIS + P I + G T I+S
Sbjct: 131 S----MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 186
Query: 471 LAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIIL 503
+ + + A E +Q PK D++ L + ++
Sbjct: 187 VEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 27 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-REL 84
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 85 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 11 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 68
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + + A
Sbjct: 69 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCA 116
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 22 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 79
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 80 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 183
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 22 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 79
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 80 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLAR--H 181
Query: 468 SANLAQALFA---YKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
+A+ A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAM---ARDAFDTEVRRLGRLRHSNVLAPL 373
+V+G G G + + V ++ M A A E R + S + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 374 AYHYRTDEKL-LVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLHT 430
Y ++ D L LV +Y GG LL LL DR P + A + I + Y+H
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAIQ 485
++K NI + +++FG + Q+ A Y +PE +Q
Sbjct: 200 ----------DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 486 S-----GKVTPKCDVYCLGIIILEILTGKFP 511
+ G+ P+CD + LG+ + E+L G+ P
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 26 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 83
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 84 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 187
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 32/284 (11%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRM---KESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E +G G G YKA G T +K++ KE + E+ L L+HSN++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELKHSNIVKLY 66
Query: 374 AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
+ +LV+E++ L LL G L+++ GIA Y H
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR-- 119
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQ-SGK 488
+ H +LK N+ I+ E E I++FG F + Y+AP+ + S K
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 489 VTPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEG--RVTDL--LD 542
+ D++ +G I E++ G FP ++ + + + + + S+ VT+L D
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPG--VSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 543 PEIASSTNSPGEM------EQLLEIGRACTQSDPEQRLEMREAV 580
P P E E +++ + DP QR+ ++A+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDT--EVRRLGRL-RHSNVLAP 372
E +G+G GS +K + DG +KR K+ A + D + EV L +HS+V+
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTW--PARLK-IVQGIARGIGYLH 429
+ D L+ EY GGSL + ++ +++ A LK ++ + RG+ Y+H
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
Query: 430 TELAHLDLPHGNLKSSNIFISPENEP-------------------LISEFGFYTMINSAN 470
+ + L H ++K SNIFIS + P I + G T I+S
Sbjct: 133 S----MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 188
Query: 471 LAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIIL 503
+ + + A E +Q PK D++ L + ++
Sbjct: 189 VEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG ++ AD V ++ S + R+ E+ L H +V+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R LT P ++ I G YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL-HKRR----KALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + E I +FG T + + Y APE + +
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ DV+ +G I+ +L GK P +
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 319 LGNGGLGSSYKA--MMADGVTVVVKRMKESSAMARDAFDT-----EVRRLGRLRHSNV-- 369
+G G G +KA + G V +KR++ + T +R L H NV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 370 LAPLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
L + RTD + LV+E++ YL D+ P T + + Q + RG+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETIKDMMFQ-LLRGLD 134
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLAQALFAYKAPEA 483
+LH+ + H +LK NI ++ + +++FG Y+ + Y+APE
Sbjct: 135 FLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 484 -IQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID----VVEWVASAFSEGRVT 538
+QS TP D++ +G I E+ F + L G+ +D +++ + E
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEM----FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 539 DLLDPEIASSTNSPGEMEQLL----EIGR----ACTQSDPEQRLEMREAVRR--IVEIQQ 588
D+ P A + S +E+ + E+G+ C +P +R+ A+ ++++
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Query: 589 SDGNMDAR--TSQN 600
N+D+ SQN
Sbjct: 306 CKENLDSHLPPSQN 319
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 317 EVLGNGGLG----SSYKAMMADGVTVVVKRMKE---SSAMARDAFDTEVRRLGRLRHSNV 369
E LG+G G + A V+V VK +K S A D F EV + L H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L T +V E P GSLL L +G H L +R + +A G+GYL
Sbjct: 74 IR-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-------FAYKAPE 482
++ H +L + N+ ++ + I +FG + + + FA+ APE
Sbjct: 129 SK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
++++ + D + G+ + E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 21 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 78
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 79 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 38 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 95
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 96 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + + G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 20 KTIWEVPERYQNLSPI-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 77
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 78 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 20 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 77
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 78 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 14/173 (8%)
Query: 346 SSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPS 405
S + R E R GRL+ +V+ P+ D +L V + G L +GP
Sbjct: 73 SDPVFRTRXQREARTAGRLQEPHVV-PIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGP- 130
Query: 406 HDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTM 465
L P + IV R IG H ++K NI +S ++ + +FG +
Sbjct: 131 ---LAPPRAVAIV----RQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASA 183
Query: 466 INSANLAQ-----ALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQ 513
L Q Y APE T + D+Y L ++ E LTG P Q
Sbjct: 184 TTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 17 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 74
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 75 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 12 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 69
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 70 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDT--EVRRLGRL-RHSNVLAP 372
E +G+G GS +K + DG +KR K+ A + D + EV L +HS+V+
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTW--PARLK-IVQGIARGIGYLH 429
+ D L+ EY GGSL + ++ +++ A LK ++ + RG+ Y+H
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLRYIH 128
Query: 430 TELAHLDLPHGNLKSSNIFISPENEP-------------------LISEFGFYTMINSAN 470
+ + L H ++K SNIFIS + P I + G T I+S
Sbjct: 129 S----MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 184
Query: 471 LAQALFAYKAPEAIQSGKVT-PKCDVYCLGIIIL 503
+ + + A E +Q PK D++ L + ++
Sbjct: 185 VEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 17 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 74
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 75 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 22 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 79
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 80 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLAR--H 181
Query: 468 SANLAQALFA---YKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
+A+ A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 21 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 78
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 79 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 32/284 (11%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRM---KESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E +G G G YKA G T +K++ KE + E+ L L+HSN++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELKHSNIVKLY 66
Query: 374 AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
+ +LV+E++ L LL G L+++ GIA Y H
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR-- 119
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQ-SGK 488
+ H +LK N+ I+ E E I++FG F + Y+AP+ + S K
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 489 VTPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEG--RVTDL--LD 542
+ D++ +G I E++ G FP ++ + + + + + S+ VT+L D
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPG--VSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 543 PEIASSTNSPGEM------EQLLEIGRACTQSDPEQRLEMREAV 580
P P E E +++ + DP QR+ ++A+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + A V G+G GS A G V VK++ +S A+ + E+
Sbjct: 25 KTIWEVPERYQNLAPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 82
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 83 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 130
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 186
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 35 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 92
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 93 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 34 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 91
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 92 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H NL + N ++ + I +FG I + + + A
Sbjct: 146 YLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 253
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P R E V
Sbjct: 254 QPD-------NCP---ERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 13 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 70
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 71 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 118
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 174
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
EV+G+G A A V +KR+ E + D E++ + + H N+++
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLL-HGDRGPSH-----DELTWPARLKIVQGIARGIGYL 428
DE LV + + GGS+L ++ H H DE T I++ + G+ YL
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT---ILREVLEGLEYL 137
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA-----NLAQALF----AYK 479
H H ++K+ NI + + I++FG + + N + F +
Sbjct: 138 HKN----GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 480 APEAIQSGK-VTPKCDVYCLGIIILEILTGKFP 511
APE ++ + K D++ GI +E+ TG P
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H NL + N ++ + I +FG I + + + A
Sbjct: 145 YLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 252
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P R E V
Sbjct: 253 QPD-------NCP---ERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 22 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 79
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 80 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLAR--H 181
Query: 468 SANLAQALFA---YKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
+A+ A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 32/284 (11%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRM---KESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E +G G G YKA G T +K++ KE + E+ L L+HSN++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELKHSNIVKLY 66
Query: 374 AYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
+ +LV+E++ L LL G L+++ GIA Y H
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR-- 119
Query: 434 HLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQ-SGK 488
+ H +LK N+ I+ E E I++FG F + Y+AP+ + S K
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 489 VTPKCDVYCLGIIILEILTGK--FPSQYLTNGNGGIDVVEWVASAFSEG--RVTDL--LD 542
+ D++ +G I E++ G FP ++ + + + + + S+ VT+L D
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPG--VSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 543 PEIASSTNSPGEM------EQLLEIGRACTQSDPEQRLEMREAV 580
P P E E +++ + DP QR+ ++A+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 11 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 68
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 69 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 12 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 69
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 70 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP- 372
LG G GS Y + + G V VK+++ S + F E++ L L HS+ +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 73
Query: 373 --LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
++Y E LV EY+P G L L R L L I +G+ YL +
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGS 129
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-------SANLAQALFAYKAPEA 483
H +L + NI + E I++FG ++ Q+ + APE+
Sbjct: 130 RRCV----HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 484 IQSGKVTPKCDVYCLGIIILEILT 507
+ + + DV+ G+++ E+ T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G ++ A G K + ++ E++ + LRH ++
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH-TELAH 434
+E +++YE++ GG L + H++++ ++ ++ + +G+ ++H H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278
Query: 435 LDLPHGNLKSSNIFISPE--NEPLISEFGFYTMIN---SANLAQALFAYKAPEAIQSGKV 489
LD LK NI + + NE + +FG ++ S + + APE + V
Sbjct: 279 LD-----LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 490 TPKCDVYCLGIIILEILTGKFP 511
D++ +G++ +L+G P
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSP 355
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTE-LAHLDLPH 439
L++ E + GG L + GD+ + E +I++ I I +LH+ +AH D+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAA-----EIMRDIGTAIQFLHSHNIAHRDVKP 137
Query: 440 GNLKSSNIFISPENEPLI--SEFGFYTMINSANLAQALFA--YKAPEAIQSGKVTPKCDV 495
NL ++ S E + ++ ++FGF L + Y APE + K CD+
Sbjct: 138 ENL----LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDM 193
Query: 496 YCLGIIILEILTGKFPSQYLTNGNG 520
+ LG+I+ +L G FP Y G
Sbjct: 194 WSLGVIMYILLCG-FPPFYSNTGQA 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 317 EVLGNGGLGSSYKAMM-----ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRL-RHSN 368
+ LG G G +A D V V +M +S+A A ++A +E++ + L +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR--------GPSH---DELTWPARLKI 417
++ L L++ EY G LL L R PSH ++L+ L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 418 VQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSANL----- 471
+A+G+ +L A + H ++ + N+ ++ + I +FG ++N +N
Sbjct: 172 SSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A+ + APE+I T + DV+ GI++ EI +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 379 TDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH-TELAHLDL 437
T E +L+ EY GG + L + E +++++ I G+ YLH + HLDL
Sbjct: 101 TSEIILILEYAAGGEIFSLCLPELAEMVSE---NDVIRLIKQILEGVYYLHQNNIVHLDL 157
Query: 438 PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCD 494
N+ S+I+ P + I +FG I A + + Y APE + +T D
Sbjct: 158 KPQNILLSSIY--PLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATD 215
Query: 495 VYCLGIIILEILTGKFP-------SQYLTNGNGGIDVVEWVASAFSE 534
++ +GII +LT P YL +D E S+ S+
Sbjct: 216 MWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ 262
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H +L + N ++ + I +FG I + + + A
Sbjct: 142 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 249
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P+ R E V
Sbjct: 250 QPD-------NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTE-LAHLDLPH 439
L++ E + GG L + GD+ + E +I++ I I +LH+ +AH D+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAA-----EIMRDIGTAIQFLHSHNIAHRDVKP 156
Query: 440 GNLKSSNIFISPENEPLI--SEFGFYTMINSANLAQALFA--YKAPEAIQSGKVTPKCDV 495
NL ++ S E + ++ ++FGF L + Y APE + K CD+
Sbjct: 157 ENL----LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDM 212
Query: 496 YCLGIIILEILTGKFPSQYLTNGNG 520
+ LG+I+ +L G FP Y G
Sbjct: 213 WSLGVIMYILLCG-FPPFYSNTGQA 236
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
E LG G G ++ A G K + ++ E++ + LRH ++
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH-TELAH 434
+E +++YE++ GG L + H++++ ++ ++ + +G+ ++H H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 435 LDLPHGNLKSSNIFISPE--NEPLISEFGFYTMIN---SANLAQALFAYKAPEAIQSGKV 489
LD LK NI + + NE + +FG ++ S + + APE + V
Sbjct: 173 LD-----LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 490 TPKCDVYCLGIIILEILTGKFP 511
D++ +G++ +L+G P
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSP 249
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H +L + N ++ + I +FG I + + + A
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 252
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P+ R E V
Sbjct: 253 QPD-------NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 318 VLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS--------- 367
VLG G G KA A D +K+++ + +EV L L H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASLNHQYVVRYYAAW 71
Query: 368 ----NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIAR 423
N + P+ + + EY +L L+H + + W ++ + I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN---------------- 467
+ Y+H++ + H +LK NIFI I +FG ++
Sbjct: 128 ALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 468 SANLAQAL--FAYKAPEAIQ-SGKVTPKCDVYCLGIIILEIL 506
S NL A+ Y A E + +G K D+Y LGII E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 41/266 (15%)
Query: 335 GVTVVVKRMKESSAMARDA-FDTEVRRLGRLRHSNVLAPLAYHYRTDEK-----LLVYEY 388
G V VK +K S A E+ L L H N++ Y E L+ E+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK---YKGICTEDGGNGIKLIMEF 106
Query: 389 IPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF 448
+P GSL L ++ +++ +LK I +G+ YL + H +L + N+
Sbjct: 107 LPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSR----QYVHRDLAARNVL 158
Query: 449 ISPENEPLISEFGFYTMINSA--------NLAQALFAYKAPEAIQSGKVTPKCDVYCLGI 500
+ E++ I +FG I + + +F Y APE + K DV+ G+
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGV 217
Query: 501 IILEILTGKFPSQYLTNGNGGIDV-VEWVASAFSEGRVTDLLD-----PEIASSTNSPGE 554
+ E+LT Y + + + + ++ + + VT L++ + N P E
Sbjct: 218 TLHELLT------YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDE 271
Query: 555 MEQLLEIGRACTQSDPEQRLEMREAV 580
+ QL+ R C + P R + +
Sbjct: 272 VYQLM---RKCWEFQPSNRTSFQNLI 294
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 335 GVTVVVKRMKESSAMARDAFDTEV---------RRLGRLRHSNVLAPLAYH---YRTDEK 382
GV V+ MAR E+ R L L N + ++ Y E
Sbjct: 30 GVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 89
Query: 383 LLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNL 442
+ E++ GGSL +L + + L K+ + RG+ YL + + H ++
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLREKH---QIMHRDV 141
Query: 443 KSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKCDVYCLGI 500
K SNI ++ E + +FG +I+S AN +Y APE +Q + + D++ +G+
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 501 IILEILTGKFP 511
++E+ G++P
Sbjct: 202 SLVELAVGRYP 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
EV+G+G A A V +KR+ E + D E++ + + H N+++
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLL-HGDRGPSH-----DELTWPARLKIVQGIARGIGYL 428
DE LV + + GGS+L ++ H H DE T I++ + G+ YL
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT---ILREVLEGLEYL 132
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSA-----NLAQALF----AYK 479
H H ++K+ NI + + I++FG + + N + F +
Sbjct: 133 HKN----GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 480 APEAIQSGK-VTPKCDVYCLGIIILEILTGKFP 511
APE ++ + K D++ GI +E+ TG P
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 318 VLGNGGLGSSYKAMMADGVT------VVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLA 371
VLG G G + D +T V+ + + +++ EV+ L +L H N+
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ LV E GG L D S + +I++ + GI Y H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 432 LAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAPEAIQ 485
+ H +LK N+ + +++ I +FG T ++ + Y APE +
Sbjct: 146 ----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH 201
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWV 528
G KCDV+ G+I+ +L+G P NG D+++ V
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPP----FNGANEYDILKKV 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 319 LGNGGLGSSYKAMMA-DGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+G+G G+ A+ G V +K++ +S A+ A+ E+R L +RH NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGLLD 91
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGP--SHDELTWPARLKIVQGIARGIGYLHTEL 432
+ DE L ++ ++ + D G H++L +V + +G+ Y+H
Sbjct: 92 V-FTPDETL--DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA- 147
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-YKAPEAIQSG-KVT 490
+ H +LK N+ ++ + E I +FG +S + Y+APE I + + T
Sbjct: 148 ---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 491 PKCDVYCLGIIILEILTGK 509
D++ +G I+ E++TGK
Sbjct: 205 QTVDIWSVGCIMAEMITGK 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 310 DLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR-HS 367
D+ + +VLG G + + VK +++ R EV L + + H
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
NVL + + D LV+E + GGS+L +H R + E + +VQ +A + +
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDF 126
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENE--PL-ISEFGF---------YTMINSANLAQAL 475
LH + + H +LK NI N+ P+ I +FG + I++ L
Sbjct: 127 LHNK----GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 476 FA--YKAPEAI-----QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ Y APE + ++ +CD++ LG+I+ +L+G P
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 41/266 (15%)
Query: 335 GVTVVVKRMKESSAMARDA-FDTEVRRLGRLRHSNVLAPLAYHYRTDEK-----LLVYEY 388
G V VK +K S A E+ L L H N++ Y E L+ E+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK---YKGICTEDGGNGIKLIMEF 94
Query: 389 IPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF 448
+P GSL L ++ +++ +LK I +G+ YL + H +L + N+
Sbjct: 95 LPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSR----QYVHRDLAARNVL 146
Query: 449 ISPENEPLISEFGFYTMINSA--------NLAQALFAYKAPEAIQSGKVTPKCDVYCLGI 500
+ E++ I +FG I + + +F Y APE + K DV+ G+
Sbjct: 147 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGV 205
Query: 501 IILEILTGKFPSQYLTNGNGGIDV-VEWVASAFSEGRVTDLLD-----PEIASSTNSPGE 554
+ E+LT Y + + + + ++ + + VT L++ + N P E
Sbjct: 206 TLHELLT------YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDE 259
Query: 555 MEQLLEIGRACTQSDPEQRLEMREAV 580
+ QL+ R C + P R + +
Sbjct: 260 VYQLM---RKCWEFQPSNRTSFQNLI 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLE 130
L LR +YL+ N+ +P G F E+ L LW ++NK + LP +F +L +L EL L+
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLD 117
Query: 131 SNQFNGTIPS-FDQPT-LVRLNLSSNKLE 157
NQ P FD T L L+L N+L+
Sbjct: 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLE 130
L L + LD+NQ +PP FD + L L N+ + LP +F KL L EL L
Sbjct: 108 LVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLY 165
Query: 131 SNQFNGTIP--SFDQPT-LVRLNLSSNKLE 157
+NQ +P +FD+ T L L L +N+L+
Sbjct: 166 NNQLK-RVPEGAFDKLTELKTLKLDNNQLK 194
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 64 DALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLP 122
D+LT+LT L L N+ +P G FD++ +L++L NN+ + R+P F KL
Sbjct: 130 DSLTKLTYLS------LGYNELQS-LPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLT 181
Query: 123 HLTELHLESNQFN----GTIPSFDQPTLVRL 149
L L L++NQ G S ++ +++L
Sbjct: 182 ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 68 ELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTE 126
+LT L+ LR L NQ +P G FD++ L+ L NN+ + R+P F L L
Sbjct: 155 KLTSLKELR---LYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKM 209
Query: 127 LHLESNQFNGT 137
L L+ N ++ T
Sbjct: 210 LQLQENPWDCT 220
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGR--LRHSNVLAPLA 374
+V+G G G M + + ++ M + A +T R R L + + A
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRA-ETACFREERDVLVNGDCQWITA 138
Query: 375 YHYRTDEK---LLVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLH 429
HY ++ LV +Y GG LL LL D+ P AR I + + I +H
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED-----MARFYIGEMVL-AIDSIH 192
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAI 484
L H ++K N+ + +++FG +N Q+ A Y +PE +
Sbjct: 193 ----QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 485 QS-----GKVTPKCDVYCLGIIILEILTGKFP 511
Q+ GK P+CD + LG+ + E+L G+ P
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS + + G+ + VK++ +S A+ + E+
Sbjct: 44 KTIWEVPERYQTLSPV-GSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-REL 101
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 102 RLLKHMKHENVIG------------LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQ 149
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 150 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 205
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 206 DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
E LGNG + YK + GV V +K +K +S E+ + L+H N++
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ ++ LV+E++ Y+ G + L + +G+ + H
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN--- 127
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQSGKV- 489
+ H +LK N+ I+ + + +FG F +N+ + Y+AP+ + +
Sbjct: 128 -KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 490 TPKCDVYCLGIIILEILTGK--FP 511
+ D++ G I+ E++TGK FP
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFP 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 47/274 (17%)
Query: 336 VTVVVKRMKESSAMARDAFD--TEVRRLGRL-RHSNVLAPLAYHYRTDEKLLVYEYIPGG 392
VT V +M +S A +D D +E+ + + +H N++ L + ++ EY G
Sbjct: 60 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 393 SLLYLLHGDR--------GPSH---DELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
+L L PSH ++L+ + +ARG+ YL A H +
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRD 175
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQAL------FAYKAPEAIQSGKVTPKCDV 495
L + N+ ++ +N I++FG I+ + + + APEA+ T + DV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 496 YCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSP 552
+ G+++ EI T +P G+ V E + EG D +N
Sbjct: 236 WSFGVLLWEIFTLGGSPYP---------GVPVEE-LFKLLKEGHRMD-------KPSNCT 278
Query: 553 GEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEI 586
E+ ++ R C + P QR ++ V + I
Sbjct: 279 NELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGR--LRHSNVLAPLA 374
+V+G G G M + + ++ M + A +T R R L + + A
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRA-ETACFREERDVLVNGDCQWITA 154
Query: 375 YHYRTDEK---LLVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLH 429
HY ++ LV +Y GG LL LL D+ P AR I + + I +H
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED-----MARFYIGEMVL-AIDSIH 208
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAI 484
L H ++K N+ + +++FG +N Q+ A Y +PE +
Sbjct: 209 ----QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 485 QS-----GKVTPKCDVYCLGIIILEILTGKFP 511
Q+ GK P+CD + LG+ + E+L G+ P
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H +L + N ++ + I +FG I + + + A
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 252
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P R E V
Sbjct: 253 QPD-------NCP---ERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 81/222 (36%), Gaps = 42/222 (18%)
Query: 318 VLGNGGLGSSYKAMMA-DGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS--------- 367
VLG G G KA A D +K+++ + +EV L L H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVXLLASLNHQYVVRYYAAW 71
Query: 368 ----NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIAR 423
N + P + + EY +L L+H + + W ++ + I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN---------------- 467
+ Y+H++ + H NLK NIFI I +FG ++
Sbjct: 128 ALSYIHSQ----GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 468 SANLAQAL--FAYKAPEAIQ-SGKVTPKCDVYCLGIIILEIL 506
S NL A+ Y A E + +G K D Y LGII E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 76 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 184
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I + I I YLH+ +++ H
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREAS-----EIXKSIGEAIQYLHS----INIAHR 185
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSAN-LAQALFA--YKAPEAIQSGKVTPKCD 494
++K N+ + + I ++FGF S N L + Y APE + K CD
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGE 554
+ LG+I +L G +P Y N G+ + + G+ + +PE + +
Sbjct: 246 XWSLGVIXYILLCG-YPPFY---SNHGLAISPGXKTRIRXGQY-EFPNPEWSEVS----- 295
Query: 555 MEQLLEIGRACTQSDPEQRLEMRE 578
E++ + R +++P QR + E
Sbjct: 296 -EEVKXLIRNLLKTEPTQRXTITE 318
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTV--VVKRMKESSAM--ARDAFDTEVRRLGRL-RHSNVL 370
+V+G G G KA + DG+ + +KRMKE ++ RD F E+ L +L H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 89
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-----------ELTWPARLKIVQ 419
L L EY P G+LL L R D L+ L
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 420 GIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLAQALF 476
+ARG+ YL + H +L + NI + I++FG + + +
Sbjct: 150 DVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 205
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ A E++ T DV+ G+++ EI++
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 319 LGNGGLGSSYKA--MMADGVTVVVKRMKESSAMARDAFDT-----EVRRLGRLRHSNV-- 369
+G G G +KA + G V +KR++ + T +R L H NV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 370 LAPLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
L + RTD + LV+E++ YL D+ P T + + Q + RG+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETIKDMMFQ-LLRGLD 134
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLAQALFAYKAPEA 483
+LH+ + H +LK NI ++ + +++FG Y+ + Y+APE
Sbjct: 135 FLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 484 -IQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID----VVEWVASAFSEGRVT 538
+QS TP D++ +G I E+ F + L G+ +D +++ + E
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEM----FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 539 DLLDPEIASSTNSPGEMEQLL----EIGR----ACTQSDPEQRLEMREAV 580
D+ P A + S +E+ + E+G+ C +P +R+ A+
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I ++G +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDYGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 35 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 92
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 93 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 317 EVLGNGGLGSSYKAMMA-DGVTV--VVKRMKESSAM--ARDAFDTEVRRLGRL-RHSNVL 370
+V+G G G KA + DG+ + +KRMKE ++ RD F E+ L +L H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 79
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-----------ELTWPARLKIVQ 419
L L EY P G+LL L R D L+ L
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 420 GIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLAQALF 476
+ARG+ YL + H +L + NI + I++FG + + +
Sbjct: 140 DVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 195
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ A E++ T DV+ G+++ EI++
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--YTM 465
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 466 INSANLAQALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A + Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMAGFVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--YTM 465
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 466 INSANLAQALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A + Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMAGFVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 319 LGNGGLGSSYKA--MMADGVTVVVKRMKESSAMARDAFDT-----EVRRLGRLRHSNV-- 369
+G G G +KA + G V +KR++ + T +R L H NV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 370 LAPLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
L + RTD + LV+E++ YL D+ P T + + Q + RG+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETIKDMMFQ-LLRGLD 134
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMINSANLAQALFAYKAPEA 483
+LH+ + H +LK NI ++ + +++FG Y+ + Y+APE
Sbjct: 135 FLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 484 -IQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGID----VVEWVASAFSEGRVT 538
+QS TP D++ +G I E+ F + L G+ +D +++ + E
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEM----FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 539 DLLDPEIASSTNSPGEMEQLL----EIGR----ACTQSDPEQRLEMREAV 580
D+ P A + S +E+ + E+G+ C +P +R+ A+
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 335 GVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEK--LLVYEYIPG 391
G V VK +K + R + E+ L L H +++ EK LV EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 392 GSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISP 451
GSL D P H + L Q I G+ YLH++ H NL + N+ +
Sbjct: 103 GSL-----RDYLPRHS-IGLAQLLLFAQQICEGMAYLHSQ----HYIHRNLAARNVLLDN 152
Query: 452 ENEPLISEFG----------FYTMINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGII 501
+ I +FG +Y + + +F Y APE ++ K DV+ G+
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGD--SPVFWY-APECLKEYKFYYASDVWSFGVT 209
Query: 502 ILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD--PEIASSTNSPGEMEQLL 559
+ E+LT SQ + ++++ + R+T+LL+ + P E+ L+
Sbjct: 210 LYELLTHCDSSQ--SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLM 267
Query: 560 E 560
+
Sbjct: 268 K 268
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H +L + N ++ + I +FG I + + + A
Sbjct: 144 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 251
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P+ R E V
Sbjct: 252 QPD-------NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 156
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 217 LGVLIYEMAAGYPP 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 318 VLGNGGLGSSYKAMMADGVT---VVVKRMKESSAMARDAFDT-----EVRRLGRLRHSNV 369
VLG GG G ++ G + ++ + + + R+A DT E L ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ L Y ++T KL L+ EY+ GG L L + D + + I+ +G+L
Sbjct: 84 VD-LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-----YLAEISMALGHL 137
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYT-MINSANLAQAL---FAYKAPEAI 484
H + + + +LK NI ++ + +++FG I+ + Y APE +
Sbjct: 138 HQK----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
D + LG ++ ++LTG P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA------LFAYKA 480
YL+ + H +L + N ++ + I +FG I + + + A
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 252
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P+ R E V
Sbjct: 253 QPD-------NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 21 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 78
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 79 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 34 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 91
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 92 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 76 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 184
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + A Y APE I S D +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 35 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 92
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 93 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 36/216 (16%)
Query: 317 EVLGNGGLGSSYKA-MMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLAPL 373
E+ G G +KA +M D V V + + K+S R+ F T ++H N+L +
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTP-----GMKHENLLQFI 75
Query: 374 AYHYRTD----EKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
A R E L+ + GSL L G+ +TW + + ++RG+ YLH
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI------ITWNELCHVAETMSRGLSYLH 129
Query: 430 TELAHL-------DLPHGNLKSSNIFISPENEPLISEFGFYTMIN------SANLAQALF 476
++ + H + KS N+ + + ++++FG +
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 477 AYKAPEAIQSG-----KVTPKCDVYCLGIIILEILT 507
Y APE ++ + D+Y +G+++ E+++
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 318 VLGNGGLGSSYKAMMADGVT---VVVKRMKESSAMARDAFDT-----EVRRLGRLRHSNV 369
VLG GG G ++ G + ++ + + + R+A DT E L ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 370 LAPLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+ L Y ++T KL L+ EY+ GG L L + D + + I+ +G+L
Sbjct: 84 VD-LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-----YLAEISMALGHL 137
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYT-MINSANLAQAL---FAYKAPEAI 484
H + + + +LK NI ++ + +++FG I+ + Y APE +
Sbjct: 138 HQK----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 485 QSGKVTPKCDVYCLGIIILEILTGKFP 511
D + LG ++ ++LTG P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 11 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 68
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 69 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+PGG + L G H AR Q I YLH+ LDL
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 156
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 217 LGVLIYEMAAGYPP 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 30/241 (12%)
Query: 335 GVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEK--LLVYEYIPG 391
G V VK +K + R + E+ L L H +++ EK LV EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 392 GSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISP 451
GSL D P H + L Q I G+ YLH + H NL + N+ +
Sbjct: 103 GSL-----RDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ----HYIHRNLAARNVLLDN 152
Query: 452 ENEPLISEFG----------FYTMINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGII 501
+ I +FG +Y + + +F Y APE ++ K DV+ G+
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGD--SPVFWY-APECLKEYKFYYASDVWSFGVT 209
Query: 502 ILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD--PEIASSTNSPGEMEQLL 559
+ E+LT SQ + ++++ + R+T+LL+ + P E+ L+
Sbjct: 210 LYELLTHCDSSQ--SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLM 267
Query: 560 E 560
+
Sbjct: 268 K 268
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 11 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 68
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 69 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--YTM 465
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I +FG +T
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 466 INSANLAQALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A + Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 173 DEMAGFVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I FG +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILGFGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 50/299 (16%)
Query: 319 LGNGGLGSSYKA-----MMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLA 371
+G G G ++A + + T+V +M +E+SA + F E + + N++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLL-----HGDRGPSHDELTWPAR------------ 414
L L++EY+ G L L H SH +L+ AR
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 415 --LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLA 472
L I + +A G+ YL + H +L + N + I++FG I SA+
Sbjct: 175 EQLCIARQVAAGMAYL----SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 473 QA------LFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVE 526
+A + PE+I + T + DV+ G+++ EI + Y G +V+
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY---GMAHEEVIY 287
Query: 527 WVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
+V +G + +A N P E+ L+ + + +D + ++R+ E
Sbjct: 288 YV----RDGNI-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP- 372
LG G GS Y + + G V VK+++ S + F E++ L L HS+ +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 76
Query: 373 --LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
++Y LV EY+P G L L R L L I +G+ YL +
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGS 132
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANLAQALFAYKAP 481
H +L + NI + E I++FG Y ++ Q+ + AP
Sbjct: 133 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--GQSPIFWYAP 186
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILT 507
E++ + + DV+ G+++ E+ T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGS---SYKAMMADGVTVV-VKRMKESSAMARDAFDTEV 358
K V+ +P ++ V G+G GS +Y A + V V + R +S AR + E+
Sbjct: 21 KTVWEVPQRLQGLRPV-GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-REL 78
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L L+H NV+ L+ + P S+ +YL+ G + +
Sbjct: 79 RLLKHLKHENVIG------------LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ 126
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
L +V + RG+ Y+H+ + H +LK SN+ ++ ++E I +FG +
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSA----GIIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP-SQYLTNGNGGI 522
A Y+APE + + D++ +G I+ E+L GK FP S Y+ +
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Query: 523 DVV 525
+VV
Sbjct: 243 EVV 245
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 310 DLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR-HS 367
D+ + +VLG G + + VK +++ R EV L + + H
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 368 NVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
NVL + + D LV+E + GGS+L +H R + E + +VQ +A + +
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDF 126
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENE--PL-ISEF---------GFYTMINSANLAQAL 475
LH + + H +LK NI N+ P+ I +F G + I++ L
Sbjct: 127 LHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 476 FA--YKAPEAI-----QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ Y APE + ++ +CD++ LG+I+ +L+G P
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA 474
L I IA + +LH++ L H +LK SNIF + ++ + +FG T ++ Q
Sbjct: 167 LHIFIQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 475 LFA----------------YKAPEAIQSGKVTPKCDVYCLGIIILEIL 506
+ Y +PE I + K D++ LG+I+ E+L
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 42/286 (14%)
Query: 308 LPDLMKAAAEVLGNGGLGSSYKAMMA--DG--VTVVVKRMKESSAMARDA--FDTEVRRL 361
+P+ +LG G GS +A + DG V V VK +K + D F E +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 362 GRLRHSNVLAPLAYHYRTDEK------LLVYEYIPGGSL-LYLLHGDRGPSHDELTWPAR 414
H +V + R+ K +++ ++ G L +LL G + L
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA 474
++ + IA G+ YL + + H +L + N ++ + +++FG I S + +
Sbjct: 140 VRFMVDIACGMEYLSSR----NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 475 LFAYKAP------EAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEW 527
A K P E++ T DV+ G+ + EI+T G+ P GI+ E
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY-------AGIENAEI 248
Query: 528 VASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQR 573
R+ P ME++ ++ C +DP+QR
Sbjct: 249 YNYLIGGNRLK-----------QPPECMEEVYDLMYQCWSADPKQR 283
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP- 372
LG G GS Y + + G V VK+++ S + F E++ L L HS+ +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 77
Query: 373 --LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
++Y LV EY+P G L L R L L I +G+ YL +
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGS 133
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANLAQALFAYKAP 481
H +L + NI + E I++FG Y ++ Q+ + AP
Sbjct: 134 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--GQSPIFWYAP 187
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILT 507
E++ + + DV+ G+++ E+ T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 319 LGNGGLGS----SYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP- 372
LG G GS Y + + G V VK+++ S + F E++ L L HS+ +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 89
Query: 373 --LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
++Y LV EY+P G L L R L L I +G+ YL +
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGS 145
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANLAQALFAYKAP 481
H +L + NI + E I++FG Y ++ Q+ + AP
Sbjct: 146 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--GQSPIFWYAP 199
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILT 507
E++ + + DV+ G+++ E+ T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 319 LGNGGLGSSYKAMMADGVT------VVVKRMKESSAM-ARDAFDTEVRRLGRLRHSNVLA 371
LG G G Y+ D + V VK + ES+++ R F E + +V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR-----GPSHDELTWPARLKIVQGIARGIG 426
L + L+V E + G L L R P T +++ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF----YTMINSANLAQALFA--YKA 480
YL+ + H +L + N ++ + I +FG Y + L + A
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTD 539
PE+++ G T D++ G+++ EI + + P Q L+N E V +G D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYLD 252
Query: 540 LLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
D N P E++ ++ R C Q +P+ R E V
Sbjct: 253 QPD-------NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 118/306 (38%), Gaps = 51/306 (16%)
Query: 317 EVLGNGGLGSSYKA-MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
EV G G +KA ++ + V V + +++ + + EV L ++H N+L +
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNE---YEVYSLPGMKHENILQFIGA 86
Query: 376 HYR---TDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
R D L L+ + GSL L + ++W I + +ARG+ YLH +
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANV------VSWNELCHIAETMARGLAYLHED 140
Query: 432 LAHLD------LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA------YK 479
+ L + H ++KS N+ + I++FG + A Y
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 480 APEAIQSG-----KVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSE 534
APE ++ + D+Y +G+++ E+ + T +G +D E++ E
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL------ASRCTAADGPVD--EYMLPFEEE 252
Query: 535 -GRVTDLLD-----------PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
G+ L D P + M L E C D E RL R
Sbjct: 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER 312
Query: 583 IVEIQQ 588
I ++Q+
Sbjct: 313 ITQMQR 318
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + A Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 377 YRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
Y E + E++ GGSL +L G +++ + +++G+ YL +
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLT----YLREKHK--- 144
Query: 437 LPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKCD 494
+ H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + + D
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 495 VYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSE 534
++ +G+ ++E+ G++P + +G+G + + E + +E
Sbjct: 205 IWSMGLSLVEMAVGRYP---IGSGSGSMAIFELLDYIVNE 241
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 15/212 (7%)
Query: 316 AEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
AE LG G G ++ + + + + + E+ L RH N+L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
+E ++++E+I G + + S EL + V + + +LH+
Sbjct: 70 FESMEELVMIFEFISGLDIFERI----NTSAFELNEREIVSYVHQVCEALQFLHSH---- 121
Query: 436 DLPHGNLKSSNIFISPENEPLIS--EFGFYTMINSANLAQALFA---YKAPEAIQSGKVT 490
++ H +++ NI I EFG + + + LF Y APE Q V+
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 491 PKCDVYCLGIIILEILTGKFPSQYLTNGNGGI 522
D++ LG ++ +L+G P +L N I
Sbjct: 182 TATDMWSLGTLVYVLLSGINP--FLAETNQQI 211
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 304 GVFGLPDLMKAAAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGR 363
G+F L E++GNG G YK + ++ + + + E+ L +
Sbjct: 24 GIFEL-------VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKK 76
Query: 364 LRHSNVLAPLAYHY-------RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK 416
H +A + D+ LV E+ GS+ L+ +G + E W A
Sbjct: 77 YSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWIAY-- 133
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALF 476
I + I RG+ +LH + H ++K N+ ++ E + +FG ++ + F
Sbjct: 134 ICREILRGLSHLHQH----KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF 189
Query: 477 A----YKAPEAIQ-----SGKVTPKCDVYCLGIIILEILTGKFP 511
+ APE I K D++ LGI +E+ G P
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGS---SYKAMMADGVTVV-VKRMKESSAMARDAFDTEV 358
K V+ +P ++ V G+G GS +Y A + V V + R +S AR + E+
Sbjct: 21 KTVWEVPQRLQGLRPV-GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-REL 78
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L L+H NV+ L+ + P S+ +YL+ G + +
Sbjct: 79 RLLKHLKHENVIG------------LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ 126
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
L +V + RG+ Y+H+ + H +LK SN+ ++ ++E I +FG +
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSA----GIIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP-SQYLTNGNGGI 522
A Y+APE + + D++ +G I+ E+L GK FP S Y+ +
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Query: 523 DVV 525
+VV
Sbjct: 243 EVV 245
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 30/216 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK---RMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
+G G + YK + + V + ++ + R F E L L+H N++
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR---- 89
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKI---------VQGIARGIG 426
Y + +E G +L + S T+ R K+ + I +G+
Sbjct: 90 FYDS------WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 427 YLHTELAHLDLPHGNLKSSNIFIS-PENEPLISEFGFYTMINSANLAQALFA---YKAPE 482
+LHT + H +LK NIFI+ P I + G T+ A+ A+A+ + APE
Sbjct: 144 FLHTRTP--PIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPE 200
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNG 518
+ K DVY G LE T ++P N
Sbjct: 201 XYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNA 235
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 104/274 (37%), Gaps = 32/274 (11%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDA-FDTEVRRLGRLRHSNVLAPLA 374
E LG G A A G VK + + + +++ + E+ L +++H N++A
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ + LV + + GG L DR T +++ + + YLH
Sbjct: 88 IYESPNHLYLVMQLVSGGELF-----DRIVEKGFYTEKDASTLIRQVLDAVYYLH----R 138
Query: 435 LDLPHGNLKSSNIFISPENEP---LISEFGFYTMINSANL---AQALFAYKAPEAIQSGK 488
+ + H +LK N+ ++E +IS+FG M ++ A Y APE +
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 489 VTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASS 548
+ D + +G+I +L G +P Y N + + + F D+ D
Sbjct: 199 YSKAVDCWSIGVIAYILLCG-YPPFYDENDSKLFEQILKAEYEFDSPYWDDISD------ 251
Query: 549 TNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
+ R + DP +R +A R
Sbjct: 252 --------SAKDFIRNLMEKDPNKRYTCEQAARH 277
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARL 415
+R+ + + L L + ++ + L +V EY PGG + L G H AR
Sbjct: 93 KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPH------ARF 146
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA- 474
Q I YLH+ LDL + +LK N+ I + +++FGF +
Sbjct: 147 YAAQ-IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG 201
Query: 475 LFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
Y APE I S D + LG++I E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 62 DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-K 120
D+ AL ELT L L L NQ +P G FD++ L++L N+ + LP +F K
Sbjct: 77 DISALKELTNLTYL---ILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDK 131
Query: 121 LPHLTELHLESNQFNGTIPS--FDQPT-LVRLNLSSNKLEG 158
L +LT L+L NQ ++P FD+ T L RL+L +N+L+
Sbjct: 132 LTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQS 171
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLE 130
L L+ + L +NQ +P G FD++ L L+ +N+ + LP +F KL +LT L L+
Sbjct: 108 LTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQS-LPKGVFDKLTNLTRLDLD 165
Query: 131 SNQFNGTIPS--FDQPT-LVRLNLSSNKLEG 158
+NQ ++P FD+ T L +L+L+ N+L+
Sbjct: 166 NNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKS 195
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 50 LYINSMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNK 109
LY N + K D LT LT L LD NQ +P G FD++ L++L ++N+
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLD------LDNNQLQS-LPEGVFDKLTQLKQLSLNDNQ 192
Query: 110 FRGRLPPSLF-KLPHLTELHLESNQFN 135
+ +P +F +L LT + L +N ++
Sbjct: 193 LKS-VPDGVFDRLTSLTHIWLLNNPWD 218
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L + H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FG + Y APE I S D +
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 317 EVLGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRLRHSN 368
+ LG G G KA A TV VK +KE+++ + RD +E L ++ H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL-SEFNVLKQVNHPH 87
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR--GPSH---------------DE--L 409
V+ + LL+ EY GSL L R GP + DE L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 410 TWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF----YTM 465
T + I++G+ YL A + L H +L + NI ++ + IS+FG Y
Sbjct: 148 TMGDLISFAWQISQGMQYL----AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 466 INSANLAQALFAYK--APEAIQSGKVTPKCDVYCLGIIILEILT 507
+ +Q K A E++ T + DV+ G+++ EI+T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK M+ + A D + V +L + H+ L L + ++ +
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY PGG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FG + Y APE I S D +
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 317 EVLGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRLRHSN 368
+ LG G G KA A TV VK +KE+++ + RD +E L ++ H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL-SEFNVLKQVNHPH 87
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR--GPSH---------------DE--L 409
V+ + LL+ EY GSL L R GP + DE L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 410 TWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF----YTM 465
T + I++G+ YL A + L H +L + NI ++ + IS+FG Y
Sbjct: 148 TMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 466 INSANLAQALFAYK--APEAIQSGKVTPKCDVYCLGIIILEILT 507
+ +Q K A E++ T + DV+ G+++ EI+T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 392 GSLLYLLHGDRGPS---HDELTWPARLKIVQ--GIAR----GIGYLHTE-LAHLDLPHGN 441
G +LYL GPS H E W A L Q G R + +LH++ L HLD+
Sbjct: 129 GGILYLQTELCGPSLQQHCE-AWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDV---- 183
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKAPEAIQSGKVTPKCDVYCL 498
K +NIF+ P + +FG + +A + Y APE +Q G DV+ L
Sbjct: 184 -KPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ-GSYGTAADVFSL 241
Query: 499 GIIILEI 505
G+ ILE+
Sbjct: 242 GLTILEV 248
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
E++G G G Y V + + ++ + AF EV + RH NV+ +
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA- 97
Query: 377 YRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLD 436
+ L + + G LY + D + L +I Q I +G+GYLH +
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK----G 150
Query: 437 LPHGNLKSSNIFISPENEPLISEFGFYTMI---------NSANLAQALFAYKAPEAIQSG 487
+ H +LKS N+F + +I++FG +++ + + + APE I+
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR-- 207
Query: 488 KVTP-----------KCDVYCLGIIILEILTGKFP 511
+++P DV+ LG I E+ ++P
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I + G +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDAGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I + G +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDRGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLA-QALFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 317 EVLGNGGLGSSYKAMM------ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRLRHSN 368
+ LG G G KA A TV VK +KE+++ + RD +E L ++ H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL-SEFNVLKQVNHPH 87
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR--GPSH---------------DE--L 409
V+ + LL+ EY GSL L R GP + DE L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 410 TWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF----YTM 465
T + I++G+ YL A + L H +L + NI ++ + IS+FG Y
Sbjct: 148 TMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 466 INSANLAQALFAYK--APEAIQSGKVTPKCDVYCLGIIILEILT 507
+ +Q K A E++ T + DV+ G+++ EI+T
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 356 TEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL 415
TE+ L RL H N++ E LV E + GG L DR +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGYYSERDAA 151
Query: 416 KIVQGIARGIGYLHTE-LAHLDLPHGNLKSSNIFISPE-NEPL-ISEFGFYTMINSANLA 472
V+ I + YLH + H DL NL ++ +P + PL I++FG ++ L
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENL----LYATPAPDAPLKIADFGLSKIVEHQVLM 207
Query: 473 QALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+ + Y APE ++ P+ D++ +GII +L G P
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 24/206 (11%)
Query: 318 VLGNGGLGSSYKAMMADGV----TVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVL 370
VLG G G K M+AD +K +K+ + D + E R L L L
Sbjct: 26 VLGKGSFG---KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L ++T ++L V EY+ GG L+Y + + P + I+ G+ +LH
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-----QVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQ 485
+ + +LK N+ + E I++FG + F Y APE I
Sbjct: 138 KR----GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFP 511
D + G+++ E+L G+ P
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 38/243 (15%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGS---SYKAMMADGVTVV-VKRMKESSAMARDAFDTEV 358
K V+ +P ++ V G+G GS +Y A + V V + R +S AR + E+
Sbjct: 13 KTVWEVPQRLQGLRPV-GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-REL 70
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L L+H NV+ L+ + P S+ +YL+ G + +
Sbjct: 71 RLLKHLKHENVIG------------LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ 118
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
L +V + RG+ Y+H+ + H +LK SN+ ++ + E I +FG +
Sbjct: 119 ALSDEHVQFLVYQLLRGLKYIHSA----GIIHRDLKPSNVAVNEDCELRILDFGLARQAD 174
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP-SQYLTNGNGGI 522
A Y+APE + + D++ +G I+ E+L GK FP S Y+ +
Sbjct: 175 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 234
Query: 523 DVV 525
+VV
Sbjct: 235 EVV 237
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 310 DLMKAAAEVLG---NGGLGSSYKAM--MADGVTVVVKRMKESSAMARDAFDTEVRR-LGR 363
D++ EV G +GGLG Y A+ +G VV+K + S A R+ L
Sbjct: 76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE 135
Query: 364 LRHSNVLAPLAYHYRTDEK-----LLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
+ H +++ + TD +V EY+ GG L G + P + + + L+I+
Sbjct: 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKRSKGQKLPVAEAIAY--LLEIL 192
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAY 478
++ YLH+ + L + +LK NI ++ E LI + G + INS +
Sbjct: 193 PALS----YLHS----IGLVYNDLKPENIMLTEEQLKLI-DLGAVSRINSFGYLYGTPGF 243
Query: 479 KAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQ 513
+APE +++G T D+Y +G L LT P++
Sbjct: 244 QAPEIVRTGP-TVATDIYTVG-RTLAALTLDLPTR 276
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I FY +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKI--LDFYLARH 174
Query: 468 SANLAQALFA---YKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
+ + A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 81 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+I T + DV+ G+ + E++T + + GI E ++S +G L
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASE-ISSILEKGE--RLPQ 240
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
P I + + I R C D + R + RE +
Sbjct: 241 PPICTI--------DVYMIMRKCWMIDADSRPKFRELI 270
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFAEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 32/226 (14%)
Query: 304 GVFGLPDLMK--AAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTE 357
G G P+ M+ E +G G G YKA G V +K+++ E+ + A E
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-RE 59
Query: 358 VRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWP 412
+ L L H N++ L + ++ LV+E+ LH D D + P
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLP 110
Query: 413 ARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINS 468
+ + +G+ + H+ + H +LK N+ I+ E +++FG F + +
Sbjct: 111 LIKSYLFQLLQGLAFCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 166
Query: 469 ANLAQALFAYKAPEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
Y+APE + K + D++ LG I E++T + FP
Sbjct: 167 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFP 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 32/226 (14%)
Query: 304 GVFGLPDLMK--AAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTE 357
G G P+ M+ E +G G G YKA G V +K+++ E+ + A E
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-RE 59
Query: 358 VRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWP 412
+ L L H N++ L + ++ LV+E+ LH D D + P
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLP 110
Query: 413 ARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINS 468
+ + +G+ + H+ + H +LK N+ I+ E +++FG F + +
Sbjct: 111 LIKSYLFQLLQGLAFCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 166
Query: 469 ANLAQALFAYKAPEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
Y+APE + K + D++ LG I E++T + FP
Sbjct: 167 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K ++ +P+ + + V G+G GS A G+ V VK++ +S A+ + E+
Sbjct: 15 KTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-REL 72
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL-----LYLLHGDRGPSHDELTWPA 413
R L ++H NV+ L+ + P SL +YL+ G + +
Sbjct: 73 RLLKHMKHENVIG------------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 414 RLK------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+L ++ I RG+ Y+H+ D+ H +LK SN+ ++ + E I + G +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDGGLARHTD 176
Query: 468 SANLAQ-ALFAYKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK--FP 511
A Y+APE + + D++ +G I+ E+LTG+ FP
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 315 AAEVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMAR---DAFDTEVRRLGRLRHSNVLA 371
+V+G G G V ++ M + AF E R + +S +
Sbjct: 79 VVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L ++ D+ L +V EY+PGG L+ L+ P + A + + +G +H
Sbjct: 139 QLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHR 198
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAIQ 485
+ +K N+ + +++FG ++ + A Y +PE ++
Sbjct: 199 D----------VKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 486 S----GKVTPKCDVYCLGIIILEILTGKFP 511
S G +CD + +G+ + E+L G P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 335 GVTVVVKRMKESSA-MARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEK--LLVYEYIPG 391
G V VK +KE R + E+ L L H +++ EK LV EY+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 392 GSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISP 451
GSL D P H + L Q I G+ YLH + H L + N+ +
Sbjct: 98 GSL-----RDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQ----HYIHRALAARNVLLDN 147
Query: 452 ENEPLISEFG----------FYTMINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGII 501
+ I +FG +Y + + +F Y APE ++ K DV+ G+
Sbjct: 148 DRLVKIGDFGLAKAVPEGHEYYRVREDGD--SPVFWY-APECLKECKFYYASDVWSFGVT 204
Query: 502 ILEILT 507
+ E+LT
Sbjct: 205 LYELLT 210
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 56 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 116 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 164
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 16/162 (9%)
Query: 356 TEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARL 415
E+ L L H N++ LV E+ GG L ++ + +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF-----EQIINRHKFDECDAA 149
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFG---FYTMINSA 469
I++ I GI YLH ++ H ++K NI + +N L I +FG F++
Sbjct: 150 NIMKQILSGICYLHKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 470 NLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
Y APE ++ K KCDV+ G+I+ +L G P
Sbjct: 206 RDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 335 GVTVVVKRMKESSA-MARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEK--LLVYEYIPG 391
G V VK +KE R + E+ L L H +++ EK LV EY+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 392 GSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISP 451
GSL D P H + L Q I G+ YLH + H L + N+ +
Sbjct: 97 GSL-----RDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQ----HYIHRALAARNVLLDN 146
Query: 452 ENEPLISEFG----------FYTMINSANLAQALFAYKAPEAIQSGKVTPKCDVYCLGII 501
+ I +FG +Y + + +F Y APE ++ K DV+ G+
Sbjct: 147 DRLVKIGDFGLAKAVPEGHEYYRVREDGD--SPVFWY-APECLKECKFYYASDVWSFGVT 203
Query: 502 ILEILT 507
+ E+LT
Sbjct: 204 LYELLT 209
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 76 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 184
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 317 EVLGNGGLGSSYKA-MMADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAP 372
++LG G G + A +K +K+ + D + E R L L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 373 LAYHYRTDEKLL-VYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ ++T E L V EY+ GG L+Y + T+ A I G+ +LH++
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA-----AEIILGLQFLHSK 137
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFY--TMINSA--NLAQALFAYKAPEAIQSG 487
+ + +LK NI + + I++FG M+ A N Y APE +
Sbjct: 138 ----GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 488 KVTPKCDVYCLGIIILEILTGKFP 511
K D + G+++ E+L G+ P
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 62 DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-K 120
D+ AL ELT L L L NQ +P G FD++ L++L N+ + LP +F K
Sbjct: 77 DISALKELTNLTYL---ILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDK 131
Query: 121 LPHLTELHLESNQFNGTIPS--FDQPT-LVRLNLSSNKLEG 158
L +LT L+L NQ ++P FD+ T L L+LS N+L+
Sbjct: 132 LTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQS 171
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLE 130
L L+ + L +NQ +P G FD++ L L ++N+ + LP +F KL +LTEL L
Sbjct: 108 LTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLS 165
Query: 131 SNQFNGTIPS--FDQPTLVR-LNLSSNKLEG 158
NQ ++P FD+ T ++ L L N+L+
Sbjct: 166 YNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKS 195
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 383 LLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
++ +YI GG L LL R P+ P + + YLH++ D+ + +
Sbjct: 82 FMIMDYIEGGELFSLLRKSQRFPN------PVAKFYAAEVCLALEYLHSK----DIIYRD 131
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYCLGI 500
LK NI + I++FGF + Y APE + + D + GI
Sbjct: 132 LKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGI 191
Query: 501 IILEILTGKFP 511
+I E+L G P
Sbjct: 192 LIYEMLAGYTP 202
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 84 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+I T + DV+ G+ + E++T + + GI E ++S +G L
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASE-ISSILEKGE--RLPQ 243
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
P I + + I R C D + R + RE +
Sbjct: 244 PPICTI--------DVYMIMRKCWMIDADSRPKFRELI 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 91 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 143
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 144 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+I T + DV+ G+ + E++T + + GI E ++S +G L
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASE-ISSILEKGE--RLPQ 250
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
P I + + I R C D + R + RE +
Sbjct: 251 PPICTI--------DVYMIMRKCWMIDADSRPKFRELI 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 154
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 155 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 211
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 212 DIWSMGLSLVEMAVGRYP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMK--ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 189
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 190 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 246
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 247 DIWSMGLSLVEMAVGRYP 264
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 34/266 (12%)
Query: 319 LGNGGLGSSYKA-MMADGVTVVVKRMKESSAM---ARDAFDTEVRRLGRLRHSNVLAPLA 374
+G G Y+A + DGV V +K+++ M AR E+ L +L H NV+ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSH---DELTWPARLKIVQGIARGIGYLHTE 431
+E +V E G L ++ + + W K + + ++H+
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCSALEHMHSR 155
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSG 487
+ H ++K +N+FI+ + + G +S A Y +PE I
Sbjct: 156 ----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211
Query: 488 KVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIAS 547
K D++ LG ++ E+ + P Y N +S + + D
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSPF-YGDKMN-----------LYSLCKKIEQCDYPPLP 259
Query: 548 STNSPGEMEQLLEIGRACTQSDPEQR 573
S + E+ QL+ + C DPE+R
Sbjct: 260 SDHYSEELRQLVNM---CINPDPEKR 282
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG Y+ D V ++ S + ++ TE+ L + +V+
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R +T P ++ +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRR----KAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + + I +FG T I + Y APE + +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ D++ LG I+ +L GK P +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 42 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 101
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 102 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 150
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 210
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 211 LGVLIYEMAAGYPP 224
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 64 DALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLP 122
D LTEL G GL NQ + +P G FD + L KL+ N+ + LP +F +L
Sbjct: 80 DDLTEL-GTLGLA-----NNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLT 131
Query: 123 HLTELHLESNQFNGTIP--SFDQPT-LVRLNLSSNKLE 157
L EL L +NQ +IP +FD+ T L L+LS+N+L+
Sbjct: 132 KLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ 168
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L L+ + L+ NQ IP G FD++ L+ L S N+ + + +L L + L
Sbjct: 130 LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188
Query: 132 NQFN 135
NQF+
Sbjct: 189 NQFD 192
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG Y+ D V ++ S + ++ TE+ L + +V+
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R +T P ++ +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRR----KAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + + I +FG T I + Y APE + +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ D++ LG I+ +L GK P +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 317 EVLGNGGLGSSYKA-MMADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAP 372
++LG G G + A +K +K+ + D + E R L L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 373 LAYHYRTDEKLL-VYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
+ ++T E L V EY+ GG L+Y + T+ A I G+ +LH++
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA-----AEIILGLQFLHSK 138
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFGFY--TMINSANLAQALFA--YKAPEAIQSG 487
+ + +LK NI + + I++FG M+ A + Y APE +
Sbjct: 139 ----GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 488 KVTPKCDVYCLGIIILEILTGKFP 511
K D + G+++ E+L G+ P
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 83 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 127
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 128 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 127
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 128 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 64 DALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLP 122
D LTEL G GL NQ + +P G FD + L KL+ N+ + LP +F +L
Sbjct: 80 DDLTEL-GTLGLA-----NNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLT 131
Query: 123 HLTELHLESNQFNGTIP--SFDQPT-LVRLNLSSNKLE 157
L EL L +NQ +IP +FD+ T L L+LS+N+L+
Sbjct: 132 KLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ 168
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L L+ + L+ NQ IP G FD++ L+ L S N+ + + +L L + L
Sbjct: 130 LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188
Query: 132 NQFN 135
NQF+
Sbjct: 189 NQFD 192
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 84 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 81 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 50 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 109
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 110 NLYMVMEYVAGGEMFSHLRRIGRFXEPH------ARFYAAQ-IVLTFEYLHS----LDLI 158
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 218
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 219 LGVLIYEMAAGYPP 232
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 85 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 137
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 138 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 82 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 134
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 135 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 317 EVLGNGGLGSSYKAMM-----ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRL-RHSN 368
+ LG G G +A D V V +M +S+A A ++A +E++ + L +H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIAR 423
++ L L++ EY G LL L D+ L L +A+
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSANL-----AQALFA 477
G+ +L ++ + H ++ + N+ ++ + I +FG ++N +N A+
Sbjct: 164 GMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 478 YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APE+I T + DV+ GI++ EI +
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 88 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 141 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRM--KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 127
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 128 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 84 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMK--ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 127
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 128 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 83 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 36/198 (18%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLA-----QALFAYKAPEAIQSGKVTPKC 493
+ +LK N+ I + +++FGF + +AL APE I S
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL----APEIILSKGYNKAV 219
Query: 494 DVYCLGIIILEILTGKFP 511
D + LG++I E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMK--ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL + +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHKIM 127
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFY-TMINS-ANLAQALFAYKAPEAIQSGKVTPKC 493
H ++K SNI ++ E + +FG +I+S AN +Y +PE +Q + +
Sbjct: 128 ---HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 317 EVLGNGGLGSSYKAMM-----ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRL-RHSN 368
+ LG G G +A D V V +M +S+A A ++A +E++ + L +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIAR 423
++ L L++ EY G LL L D+ L L +A+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSANL-----AQALFA 477
G+ +L ++ + H ++ + N+ ++ + I +FG ++N +N A+
Sbjct: 172 GMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 478 YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APE+I T + DV+ GI++ EI +
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 82 RLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 134
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 135 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 87 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 139
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 140 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAPL 373
VLG GG G + M A G K++ + R + E + L ++ HS + L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 374 AYHYRTDEKL-LVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLHT 430
AY + T L LV + GG + Y ++ + P E P + I G+ +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQ 307
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQS 486
++ + +LK N+ + + IS+ G + + +A + APE +
Sbjct: 308 R----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 487 GKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+ + E++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 84 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 136
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAPL 373
VLG GG G + M A G K++ + R + E + L ++ HS + L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 374 AYHYRTDEKL-LVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLHT 430
AY + T L LV + GG + Y ++ + P E P + I G+ +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQ 307
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQS 486
++ + +LK N+ + + IS+ G + + +A + APE +
Sbjct: 308 R----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 487 GKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+ + E++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG Y+ D V ++ S + ++ TE+ L + +V+
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R +T P ++ +G+ YLH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL-HKRR----KAVTEPEARYFMRQTIQGVQYLHNN--- 145
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + + I +FG T I + Y APE + +
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ D++ LG I+ +L GK P +
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 81 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 24/142 (16%)
Query: 384 LVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGN 441
LV EY GG LL LL G+R P+ + A + + +GY+H +
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR----------D 187
Query: 442 LKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-----YKAPEAIQS-------GKV 489
+K NI + +++FG + + ++L A Y +PE +Q+ G
Sbjct: 188 IKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSY 247
Query: 490 TPKCDVYCLGIIILEILTGKFP 511
P+CD + LG+ E+ G+ P
Sbjct: 248 GPECDWWALGVFAYEMFYGQTP 269
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 384 LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLK 443
+V E + GG LL + + S E + ++ I + + YLH + + H +LK
Sbjct: 93 VVTELMKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYLHAQ----GVVHRDLK 143
Query: 444 SSNI-FISPENEP---LISEFGFYTMINSAN--LAQALFA--YKAPEAIQSGKVTPKCDV 495
SNI ++ P I +FGF + + N L + + APE ++ CD+
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDI 203
Query: 496 YCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVT 538
+ LG+++ +LTG P NG D E + + G+ +
Sbjct: 204 WSLGVLLYTMLTGYTPF-----ANGPDDTPEEILARIGSGKFS 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 106 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 158
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 159 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAPL 373
VLG GG G + M A G K++ + R + E + L ++ HS + L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 374 AYHYRTDEKL-LVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLHT 430
AY + T L LV + GG + Y ++ + P E P + I G+ +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQ 307
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQS 486
++ + +LK N+ + + IS+ G + + +A + APE +
Sbjct: 308 R----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 487 GKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+ + E++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 317 EVLGNGGLGSSYKAMMAD--------GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSN 368
E LG G +K + + V++K + ++ ++F + +L H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
++ + DE +LV E++ GSL L ++ + + W +L++ + +A + +L
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN--ILW--KLEVAKQLAWAMHFL 129
Query: 429 HTELAHLDLPHGNLKSSNIFISPE------NEPLI--SEFGFYTMINSANLAQALFAYKA 480
L HGN+ + NI + E N P I S+ G + ++ Q +
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTG 508
PE I++ K + D + G + EI +G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 81 RLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y APE I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I ++ G P
Sbjct: 224 LGVLIYQMAAGYPP 237
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 32/242 (13%)
Query: 335 GVTVVVKRMK-ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEK-----LLVYEY 388
G V VK +K ++ R + E+ L L H +++ Y ++ LV EY
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK---YKGCCEDAGAASLQLVMEY 116
Query: 389 IPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF 448
+P GSL D P H + L Q I G+ YLH + H +L + N+
Sbjct: 117 VPLGSL-----RDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ----HYIHRDLAARNVL 166
Query: 449 ISPENEPLISEFGFYTMINSANLA--------QALFAYKAPEAIQSGKVTPKCDVYCLGI 500
+ + I +FG + + +F Y APE ++ K DV+ G+
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGV 225
Query: 501 IILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD--PEIASSTNSPGEMEQL 558
+ E+LT SQ + ++++ + R+T+LL+ + P E+ L
Sbjct: 226 TLYELLTHCDSSQ--SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHL 283
Query: 559 LE 560
++
Sbjct: 284 MK 285
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVLAPL 373
VLG GG G + M A G K++ + R + E + L ++ HS + L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 374 AYHYRTDEKL-LVYEYIPGGSLLYLLHG--DRGPSHDELTWPARLKIVQGIARGIGYLHT 430
AY + T L LV + GG + Y ++ + P E P + I G+ +LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLHQ 307
Query: 431 ELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQS 486
++ + +LK N+ + + IS+ G + + +A + APE +
Sbjct: 308 R----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 487 GKVTPKCDVYCLGIIILEILTGKFP 511
+ D + LG+ + E++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 83 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+I T + DV+ G+ + E++T + + GI E ++S +G L
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASE-ISSILEKGE--RLPQ 242
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
P I + + I R C D + R + RE +
Sbjct: 243 PPICTI--------DVYMIMRKCWMIDADSRPKFRELI 272
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 75 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 127
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 128 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAM----ARDAFDTEVRRLGRLRHSNVLAPLA 374
LG GG Y+ D V ++ S + ++ TE+ L + +V+
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 375 YHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAH 434
+ D +V E SLL L H R +T P ++ +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRR----KAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 435 LDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVT 490
+ H +LK N+F++ + + I +FG T I + Y APE + +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 491 PKCDVYCLGIIILEILTGKFPSQ 513
+ D++ LG I+ +L GK P +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 33/221 (14%)
Query: 307 GLPDLMKAAAEVLGNGGLGSSY----KAMMADGVTVVVKRMKESSAMARDAFDTEVRRLG 362
GL D + + LG+G G K A+ ++K+ ++ A EV L
Sbjct: 1 GLSDRYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 363 RLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK------ 416
+L H N++ + LV E GG L DE+ +
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----------DEIILRQKFSEVDAAV 108
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFI-SPENEPLIS--EFGFYTMINSANLAQ 473
I++ + G YLH ++ H +LK N+ + S + LI +FG +
Sbjct: 109 IMKQVLSGTTYLHKH----NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 164
Query: 474 ALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
Y APE ++ K KCDV+ G+I+ +L G P
Sbjct: 165 ERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 83 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLD 542
+I T + DV+ G+ + E++T + + GI E ++S +G L
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASE-ISSILEKGE--RLPQ 242
Query: 543 PEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
P I + + I R C D + R + RE +
Sbjct: 243 PPICTI--------DVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 83/210 (39%), Gaps = 30/210 (14%)
Query: 317 EVLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARD--AFDTEVRRLGRLRHSNV---- 369
E LG G + + G+ K + ARD + E R +L+H N+
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ ++HY LV++ + GG L + S + + +Q I I Y
Sbjct: 95 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 143
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA---YKAP 481
H+ + H NLK N+ ++ + + +++FG +N + Y +P
Sbjct: 144 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
E ++ + D++ G+I+ +L G P
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 85 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 137
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 138 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 83 RLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 135
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMK--ESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
LG G G +K V+ +++ E R+ E++ L ++
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 377 YRTDEKLLVYEYIPGGSLLYLLH-GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHL 435
Y E + E++ GGSL +L R P K+ + +G+ YL +
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLREKHK-- 128
Query: 436 DLPHGNLKSSNIFISPENEPLISEFGFYTMI--NSANLAQALFAYKAPEAIQSGKVTPKC 493
+ H ++K SNI ++ E + +FG + AN +Y +PE +Q + +
Sbjct: 129 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQS 187
Query: 494 DVYCLGIIILEILTGKFP 511
D++ +G+ ++E+ G++P
Sbjct: 188 DIWSMGLSLVEMAVGRYP 205
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP---------SHDELTWPARLKIVQG 420
L + L+V E+ G+L L R D LT +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQA 474
+A+G+ +L A H +L + NI +S +N I +FG I A+
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 475 LFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFS 533
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRRLK 265
Query: 534 EG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSD 590
EG R D PE+ + +L+ C +P QR E V + + Q++
Sbjct: 266 EGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQAN 312
Query: 591 GNMD 594
D
Sbjct: 313 AQQD 316
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNI-FISPENEP---LISEFGFYTMINSAN--LAQA 474
I + + YLH + + H +LK SNI ++ P I +FGF + + N L
Sbjct: 125 ITKTVEYLHAQ----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 475 LFA--YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAF 532
+ + APE ++ CD++ LG+++ LTG P NG D E + +
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-----ANGPDDTPEEILARI 235
Query: 533 SEGRVT 538
G+ +
Sbjct: 236 GSGKFS 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 32/211 (15%)
Query: 317 EVLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARD--AFDTEVRRLGRLRHSNV---- 369
E LG G + + G+ K + ARD + E R +L+H N+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ ++HY LV++ + GG L + S + + +Q I I Y
Sbjct: 72 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 120
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H+ + H NLK N+ ++ + + +++FG +N + A FA Y +
Sbjct: 121 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 175
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ + D++ G+I+ +L G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA G+ YL
Sbjct: 78 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYL 130
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 131 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 88 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 140
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 141 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 32/211 (15%)
Query: 317 EVLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARD--AFDTEVRRLGRLRHSNV---- 369
E LG G + + G+ K + ARD + E R +L+H N+
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ ++HY LV++ + GG L + S + + +Q I I Y
Sbjct: 71 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 119
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H+ + H NLK N+ ++ + + +++FG +N + A FA Y +
Sbjct: 120 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 174
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ + D++ G+I+ +L G P
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V +K ++E +S A E + + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 81 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 133
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 318 VLGNGGLGSSYKAMMA----DGVTVVVKRMKESSAMA-RDAFDTEVRRLGRLRHSNVLAP 372
+LG G G Y+ + + + V VK K+ + ++ F +E + L H +++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + ++ E P G L + L ++ S LT L +Q I + + YL +
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLERNKN-SLKVLT--LVLYSLQ-ICKAMAYLES-- 131
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-----SANLAQALFAYKAPEAIQSG 487
++ H ++ NI ++ + +FG I A++ + + +PE+I
Sbjct: 132 --INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 488 KVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIA 546
+ T DV+ + + EIL+ GK P +L N + V +G L P++
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------VIGVLEKG--DRLPKPDLC 239
Query: 547 SSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSDGNM 593
L + C DP R E V + ++ Q + ++
Sbjct: 240 PPV--------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 278
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 40/288 (13%)
Query: 318 VLGNGGLGSSYKAMMA----DGVTVVVKRMKESSAMA-RDAFDTEVRRLGRLRHSNVLAP 372
+LG G G Y+ + + + V VK K+ + ++ F +E + L H +++
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + ++ E P G L + L ++ S LT L +Q I + + YL +
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLERNKN-SLKVLT--LVLYSLQ-ICKAMAYLES-- 127
Query: 433 AHLDLPHGNLKSSNIFI-SPENEPLISEFGFYTMIN-----SANLAQALFAYKAPEAIQS 486
++ H ++ NI + SPE L +FG I A++ + + +PE+I
Sbjct: 128 --INCVHRDIAVRNILVASPECVKL-GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 487 GKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEI 545
+ T DV+ + + EIL+ GK P +L N + V +G L P++
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------VIGVLEKG--DRLPKPDL 234
Query: 546 ASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSDGNM 593
L + C DP R E V + ++ Q + ++
Sbjct: 235 CPPV--------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 274
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 32/211 (15%)
Query: 317 EVLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMARD--AFDTEVRRLGRLRHSNV---- 369
E LG G + + G+ K + ARD + E R +L+H N+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ ++HY LV++ + GG L + S + + +Q I I Y
Sbjct: 72 DSIQEESFHY------LVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY 120
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H+ + H NLK N+ ++ + + +++FG +N + A FA Y +
Sbjct: 121 CHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLS 175
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ + D++ G+I+ +L G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 28/194 (14%)
Query: 335 GVTVVVKRMKESSAMARDAFDTE-VRRLGRLRHS------------NVLAPLAYHYRTDE 381
G ++VK + + A D + V +L ++ H+ L L + ++ +
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 382 KL-LVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLP 438
L +V EY+ GG + L G H AR Q I YLH+ LDL
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPH------ARFYAAQ-IVLTFEYLHS----LDLI 163
Query: 439 HGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA-LFAYKAPEAIQSGKVTPKCDVYC 497
+ +LK N+ I + +++FGF + Y AP I S D +
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWA 223
Query: 498 LGIIILEILTGKFP 511
LG++I E+ G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 318 VLGNGGLGSSYKAMMA----DGVTVVVKRMKESSAMA-RDAFDTEVRRLGRLRHSNVLAP 372
+LG G G Y+ + + + V VK K+ + ++ F +E + L H +++
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTEL 432
+ + ++ E P G L + L ++ S LT L +Q I + + YL +
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLERNKN-SLKVLT--LVLYSLQ-ICKAMAYLES-- 143
Query: 433 AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-----SANLAQALFAYKAPEAIQSG 487
++ H ++ NI ++ + +FG I A++ + + +PE+I
Sbjct: 144 --INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 488 KVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIA 546
+ T DV+ + + EIL+ GK P +L N + V +G L P++
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------VIGVLEKG--DRLPKPDLC 251
Query: 547 SSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQSDGNM 593
L + C DP R E V + ++ Q + ++
Sbjct: 252 PPV--------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 290
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 302 QKGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRR 360
Q V+ D++ E LG+G G ++ + A G V K + + + E+
Sbjct: 46 QGSVYDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 101
Query: 361 LGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHD-ELTWPARLKIVQ 419
+ +L H ++ E +L+ E++ GG L DR + D +++ + ++
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF-----DRIAAEDYKMSEAEVINYMR 156
Query: 420 GIARGIGYLHTE-LAHLDLPHGNL-----KSSNIFISPENEPLISEFGFYTMINSANLAQ 473
G+ ++H + HLD+ N+ K+S++ I +FG T +N + +
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSV--------KIIDFGLATKLNPDEIVK 208
Query: 474 ALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVAS 530
A + APE + V D++ +G++ +L+G P G D +E + +
Sbjct: 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF-------AGEDDLETLQN 261
Query: 531 AFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
+ D E A S+ SP + + + Q +P +RL + +A+
Sbjct: 262 V----KRCDWEFDEDAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDAL 303
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 65
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 66 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 117 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 78 IYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQFNG 136
++L+ NQ + ++ PG FD + L++L+F++NK +P +F KL LT+L L N
Sbjct: 38 LWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLK- 94
Query: 137 TIP--SFDQ-PTLVRLNLSSNKLEGE 159
+IP +FD +L + L +N + E
Sbjct: 95 SIPRGAFDNLKSLTHIYLYNNPWDCE 120
Score = 32.7 bits (73), Expect = 0.56, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 101 RKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQFNGTIPS--FDQPT-LVRLNLSSNKL 156
++LW +NN+ +L P +F L +L +L+ SN+ IP+ FD+ T L +L+L+ N L
Sbjct: 36 QRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHL 93
Query: 157 EGEIP 161
+ IP
Sbjct: 94 K-SIP 97
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 115/305 (37%), Gaps = 53/305 (17%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 371 APLAYHYRTDEKLLVY-EYIPGGSLLYLLHGDRGP----------SHDELTWPARLKIVQ 419
L + L+V E+ G+L L R D LT +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 420 GIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQ 473
+A+G+ +L A H +L + NI +S +N I +FG I A+
Sbjct: 156 QVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 474 ALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAF 532
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRRL 264
Query: 533 SEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
EG R D PE+ + +L+ C +P QR E V + + Q+
Sbjct: 265 KEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 590 DGNMD 594
+ D
Sbjct: 312 NAQQD 316
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRLRHSNVLAPLA 374
+G G G K +DG +V K + S + +EV L L+H N++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 375 YHYRTDEK-----LLVYEYIPGGSLLYLL-HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
Y+ R ++ +V EY GG L ++ G + + + + R+ +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-SANLAQALFA---YKAPEAI 484
++ H L H +LK +N+F+ + + +FG ++N + A+A Y +PE +
Sbjct: 130 RSDGGHTVL-HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 485 QSGKVTPKCDVYCLGIIILEI 505
K D++ LG ++ E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 358 VRRLGRLRHSNV--LAPLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWP 412
+RRL H NV L + RTD ++ LV+E++ YL D+ P P
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL---DKAPPPG---LP 110
Query: 413 ARL--KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMIN 467
A +++ RG+ +LH + H +LK NI ++ +++FG Y+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 166
Query: 468 SANLAQALFAYKAPEA-IQSGKVTPKCDVYCLGIIILEILTGK 509
+ + Y+APE +QS TP D++ +G I E+ K
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRK 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 67
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 68 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 119 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 174
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 65
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 66 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 117 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 70
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 71 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 122 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 317 EVLGNGGLGSSYKAMM-----ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRL-RHSN 368
+ LG G G +A D V V +M +S+A A ++A +E++ + L +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR---------GPSHDELTWPARLKIVQ 419
++ L L++ EY G LL L ++ L+ L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 420 GIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSANL-----AQ 473
+A+G+ +L ++ + H ++ + N+ ++ + I +FG ++N +N A+
Sbjct: 172 QVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 474 ALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APE+I T + DV+ GI++ EI +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 32/257 (12%)
Query: 353 AFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWP 412
+ + E+ L +++H N++A + L+ + + GG L DR T
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTER 116
Query: 413 ARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF---ISPENEPLISEFGFYTMINSA 469
+++ + + YLH L + H +LK N+ + +++ +IS+FG M +
Sbjct: 117 DASRLIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 470 NL---AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVE 526
++ A Y APE + + D + +G+I +L G +P Y N + +
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQIL 231
Query: 527 WVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR--IV 584
F D+ S ++ + L+E DPE+R +A++ I
Sbjct: 232 KAEYEFDSPYWDDI-------SDSAKDFIRHLME-------KDPEKRFTCEQALQHPWIA 277
Query: 585 EIQQSDGNMDARTSQNI 601
D N+ S+ I
Sbjct: 278 GDTALDKNIHQSVSEQI 294
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 358 VRRLGRLRHSNV--LAPLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWP 412
+RRL H NV L + RTD ++ LV+E++ YL D+ P P
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL---DKAPPPG---LP 110
Query: 413 ARL--KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSAN 470
A +++ RG+ +LH + H +LK NI ++ +++FG I S
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGL-ARIYSYQ 165
Query: 471 LAQA----LFAYKAPEA-IQSGKVTPKCDVYCLGIIILEILTGK 509
+A A Y+APE +QS TP D++ +G I E+ K
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRK 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 317 EVLGNGGLGSSYKAMM-----ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRL-RHSN 368
+ LG G G +A D V V +M +S+A A ++A +E++ + L +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPA------------RLK 416
++ L L++ EY G LL L R S T PA L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSANL---- 471
+A+G+ +L ++ + H ++ + N+ ++ + I +FG ++N +N
Sbjct: 169 FSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 472 -AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A+ + APE+I T + DV+ GI++ EI +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 33/221 (14%)
Query: 307 GLPDLMKAAAEVLGNGGLGSSY----KAMMADGVTVVVKRMKESSAMARDAFDTEVRRLG 362
GL D + + LG+G G K A+ ++K+ ++ A EV L
Sbjct: 18 GLSDRYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 363 RLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLK------ 416
+L H N++ + LV E GG L DE+ +
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----------DEIILRQKFSEVDAAV 125
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFI-SPENEPLIS--EFGFYTMINSANLAQ 473
I++ + G YLH ++ H +LK N+ + S + LI +FG +
Sbjct: 126 IMKQVLSGTTYLHKH----NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 181
Query: 474 ALFA---YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
Y APE ++ K KCDV+ G+I+ +L G P
Sbjct: 182 ERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 115/306 (37%), Gaps = 54/306 (17%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLA 472
+A+G+ +L A H +L + NI +S +N I +FG I A
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 473 QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASA 531
+ + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRR 254
Query: 532 FSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG R D PE+ + +L+ C +P QR E V + + Q
Sbjct: 255 LKEGTRMRAPDYTTPEM---------YQTMLD----CWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 589 SDGNMD 594
++ D
Sbjct: 302 ANAQQD 307
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 30/243 (12%)
Query: 294 GELVLVNGQKGVFGLPDLMKAAAEVLGNGGLG---SSYKAMMADGVTVVVKRMKESSAMA 350
GE+ +V GQ G P + + +G G G S+Y + V + E
Sbjct: 29 GEVEMVKGQPFDVG-PRYTQL--QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYC 85
Query: 351 RDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL---LYLLHGDRGPSHD 407
+ E++ L R RH NV+ + + + YI + LY L + S+D
Sbjct: 86 QRTL-REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND 144
Query: 408 ELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN 467
+ + + I RG+ Y+H+ ++ H +LK SN+ I+ + I +FG + +
Sbjct: 145 HICY-----FLYQILRGLKYIHSA----NVLHRDLKPSNLLINTTCDLKICDFGLARIAD 195
Query: 468 SANLAQALFA-------YKAPEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP-SQYLT 516
+ Y+APE + + K T D++ +G I+ E+L+ + FP YL
Sbjct: 196 PEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
Query: 517 NGN 519
N
Sbjct: 256 QLN 258
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDT----EVRRLGRLRHSNVL---- 370
+G G G A D V V +K+ S + E++ L R RH N++
Sbjct: 51 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 371 ---APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
AP + + LV + G+ LY L + S+D + + + I RG+ Y
Sbjct: 109 IIRAPTIEQMK--DVYLVTHLM--GADLYKLLKTQHLSNDHICY-----FLYQILRGLKY 159
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YKA 480
+H+ ++ H +LK SN+ ++ + I +FG + + + Y+A
Sbjct: 160 IHSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTGK--FPSQY 514
PE + + K T D++ +G I+ E+L+ + FP ++
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 115/306 (37%), Gaps = 54/306 (17%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 371 APLAYHYRTDEKLLVY-EYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLA 472
+A+G+ +L A H +L + NI +S +N I +FG I A
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 473 QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASA 531
+ + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRR 254
Query: 532 FSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG R D PE+ + +L+ C +P QR E V + + Q
Sbjct: 255 LKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 589 SDGNMD 594
++ D
Sbjct: 302 ANAQQD 307
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 344 KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG 403
KE+ + + E+ L +++H N++A + L+ + + GG L DR
Sbjct: 53 KEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRI 107
Query: 404 PSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF---ISPENEPLISEF 460
T +++ + + YLH L + H +LK N+ + +++ +IS+F
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 461 GFYTMINSANL---AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTN 517
G M + ++ A Y APE + + D + +G+I +L G +P Y N
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 518 GNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMR 577
+ + F D+ S ++ + L+E DPE+R
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDI-------SDSAKDFIRHLME-------KDPEKRFTCE 268
Query: 578 EAVRR--IVEIQQSDGNMDARTSQNI 601
+A++ I D N+ S+ I
Sbjct: 269 QALQHPWIAGDTALDKNIHQSVSEQI 294
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 344 KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG 403
KE+ + + E+ L +++H N++A + L+ + + GG L DR
Sbjct: 53 KEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRI 107
Query: 404 PSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF---ISPENEPLISEF 460
T +++ + + YLH L + H +LK N+ + +++ +IS+F
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 461 GFYTMINSANL---AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTN 517
G M + ++ A Y APE + + D + +G+I +L G +P Y N
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 518 GNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMR 577
+ + F D+ S ++ + L+E DPE+R
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDI-------SDSAKDFIRHLME-------KDPEKRFTCE 268
Query: 578 EAVRR--IVEIQQSDGNMDARTSQNI 601
+A++ I D N+ S+ I
Sbjct: 269 QALQHPWIAGDTALDKNIHQSVSEQI 294
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 30/245 (12%)
Query: 344 KESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRG 403
KE+ + + E+ L +++H N++A + L+ + + GG L DR
Sbjct: 53 KEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRI 107
Query: 404 PSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIF---ISPENEPLISEF 460
T +++ + + YLH L + H +LK N+ + +++ +IS+F
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 461 GFYTMINSANL---AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTN 517
G M + ++ A Y APE + + D + +G+I +L G +P Y N
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 518 GNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMR 577
+ + F D+ S ++ + L+E DPE+R
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDI-------SDSAKDFIRHLME-------KDPEKRFTCE 268
Query: 578 EAVRR 582
+A++
Sbjct: 269 QALQH 273
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 64 DALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLP 122
D LT+LT L L +NQ +P G FD++ L L+ NK + LP +F KL
Sbjct: 49 DKLTQLTKLS------LSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQS-LPNGVFDKLT 100
Query: 123 HLTELHLESNQFNGTIPS--FDQPT-LVRLNLSSNKLEGEIP 161
L EL L++NQ ++P FD+ T L ++ L +N + P
Sbjct: 101 QLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
Score = 37.0 bits (84), Expect = 0.029, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 64 DALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLP 122
D LT+LT +YL +N+ +P G FD++ L++L N+ + +P +F +L
Sbjct: 73 DKLTKLT------ILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLT 124
Query: 123 HLTELHLESNQFNGTIPSFDQPTLVR-LNLSSNKLEGEIPAS 163
L ++ L +N ++ + P D L R LN +S K +G S
Sbjct: 125 SLQKIWLHTNPWDCSCPRIDY--LSRWLNKNSQKEQGSAKCS 164
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 80 LDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQFNGTI 138
L+ N+ +P G FD++ L KL S N+ + LP +F KL LT L+L N+ ++
Sbjct: 35 LESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQ-SL 91
Query: 139 PS--FDQPT-LVRLNLSSNKLE 157
P+ FD+ T L L L +N+L+
Sbjct: 92 PNGVFDKLTQLKELALDTNQLK 113
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 25/101 (24%)
Query: 59 GKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSN--------NKF 110
G ++ + LT L GL + + N F EI PG F + +L+KLW N N F
Sbjct: 204 GMCNIKDMPNLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262
Query: 111 RG---------------RLPPSLFK-LPHLTELHLESNQFN 135
G LP LF L +L ELHL N +N
Sbjct: 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 60 KIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF 119
+I+V A GL L + L N + IP G F+ + LR+LW NN +
Sbjct: 113 QIEVGAFN---GLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFN 168
Query: 120 KLPHLTELHL 129
++P L L L
Sbjct: 169 RVPSLMRLDL 178
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 60/309 (19%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 371 APLAYHYRTDEKLLVY-EYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSA 469
+A+G+ +L A H +L + NI +S +N I +FG Y A
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 470 NLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
L + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 202 RLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEF 251
Query: 529 ASAFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
EG R D PE+ + +L+ C +P QR E V +
Sbjct: 252 CRRLKEGTRMRAPDYTTPEM---------YQTMLD----CWHGEPSQRPTFSELVEHLGN 298
Query: 586 IQQSDGNMD 594
+ Q++ D
Sbjct: 299 LLQANAQQD 307
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 115/306 (37%), Gaps = 54/306 (17%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLA 472
+A+G+ +L A H +L + NI +S +N I +FG I A
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 473 QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASA 531
+ + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRR 263
Query: 532 FSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG R D PE+ + +L+ C +P QR E V + + Q
Sbjct: 264 LKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 589 SDGNMD 594
++ D
Sbjct: 311 ANAQQD 316
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 25/209 (11%)
Query: 317 EVLGNGGLGSSYKAMMAD--------GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSN 368
E LG G +K + + V++K + ++ ++F + +L H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
++ DE +LV E++ GSL L ++ + + W +L++ + +A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN--ILW--KLEVAKQLAAAMHFL 129
Query: 429 HTELAHLDLPHGNLKSSNIFISPE------NEPLI--SEFGFYTMINSANLAQALFAYKA 480
L HGN+ + NI + E N P I S+ G + ++ Q +
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTG 508
PE I++ K + D + G + EI +G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 70
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 71 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 122 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 177
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 60/309 (19%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 371 APLAYHYRTDEKLLVY-EYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSA 469
+A+G+ +L A H +L + NI +S +N I +FG Y A
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 470 NLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
L + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 202 RLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEF 251
Query: 529 ASAFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
EG R D PE+ + +L+ C +P QR E V +
Sbjct: 252 CRRLKEGTRMRAPDYTTPEM---------YQTMLD----CWHGEPSQRPTFSELVEHLGN 298
Query: 586 IQQSDGNMD 594
+ Q++ D
Sbjct: 299 LLQANAQQD 307
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 67
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 68 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 119 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 68
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 69 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 120 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 69
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 70 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 121 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 69
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 70 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 121 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 68
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 69 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 120 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 65
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 66 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 117 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 60/309 (19%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSA 469
+A+G+ +L A H +L + NI +S +N I +FG Y A
Sbjct: 192 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 470 NLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
L + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 248 RLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEF 297
Query: 529 ASAFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
EG R D PE+ + +L+ C +P QR E V +
Sbjct: 298 CRRLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGN 344
Query: 586 IQQSDGNMD 594
+ Q++ D
Sbjct: 345 LLQANAQQD 353
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 67
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 68 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 119 FCHSH----RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 69
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 70 LLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 121 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 65
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 66 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 117 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 67
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 68 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 119 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 60/309 (19%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSA 469
+A+G+ +L A H +L + NI +S +N I +FG Y A
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 470 NLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
L + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 211 RLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEF 260
Query: 529 ASAFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
EG R D PE+ + +L+ C +P QR E V +
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGN 307
Query: 586 IQQSDGNMD 594
+ Q++ D
Sbjct: 308 LLQANAQQD 316
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 60/309 (19%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSA 469
+A+G+ +L A H +L + NI +S +N I +FG Y A
Sbjct: 157 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 470 NLAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWV 528
L + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 213 RLP---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEF 262
Query: 529 ASAFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVE 585
EG R D PE+ + +L+ C +P QR E V +
Sbjct: 263 CRRLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGN 309
Query: 586 IQQSDGNMD 594
+ Q++ D
Sbjct: 310 LLQANAQQD 318
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 68
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 69 LLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 120 FCHSH----RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 115/306 (37%), Gaps = 54/306 (17%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-----------SHDELTWPARLKIV 418
L + L+V E+ G+L L R D LT +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLA 472
+A+G+ +L A H +L + NI +S +N I +FG I A
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 473 QALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASA 531
+ + APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRR 263
Query: 532 FSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQ 588
EG R D PE+ + +L+ C +P QR E V + + Q
Sbjct: 264 LKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 589 SDGNMD 594
++ D
Sbjct: 311 ANAQQD 316
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 66
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E+ LH D D + P + + +G+
Sbjct: 67 LLDVIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 FCHSH----RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 317 EVLGNGGLGSSYKAM-MADG----VTVVVKRMKE-SSAMARDAFDTEVRRLGRLRHSNVL 370
+VLG+G G+ YK + + +G + V + ++E +S A E + + + +V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 371 APLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
L T L+ + +P G LL + H D S L W + IA+G+ YL
Sbjct: 115 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 167
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS------ANLAQALFAYKAPE 482
L H +L + N+ + I++FG ++ + A + + A E
Sbjct: 168 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 483 AIQSGKVTPKCDVYCLGIIILEILT 507
+I T + DV+ G+ + E++T
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRLRHSNVLAPLA 374
+G G G K +DG +V K + S + +EV L L+H N++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 375 YHYRTDEK-----LLVYEYIPGGSLLYLL-HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
Y+ R ++ +V EY GG L ++ G + + + + R+ +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
++ H L H +LK +N+F+ + + +FG ++N F Y +PE +
Sbjct: 130 RSDGGHTVL-HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 485 QSGKVTPKCDVYCLGIIILEI 505
K D++ LG ++ E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 412 PARL--KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMI--- 466
P R+ K+ I + + YL + + H ++K SNI + + + +FG +
Sbjct: 122 PERILGKMTVAIVKALYYLKEKHGVI---HRDVKPSNILLDERGQIKLCDFGISGRLVDD 178
Query: 467 NSANLAQALFAYKAPEAIQSGKVTP-----KCDVYCLGIIILEILTGKFP 511
+ + + AY APE I T + DV+ LGI ++E+ TG+FP
Sbjct: 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 358 VRRLGRLRHSNV--LAPLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWP 412
+RRL H NV L + RTD ++ LV+E++ YL D+ P P
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL---DKAPPPG---LP 118
Query: 413 ARL--KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---YTMIN 467
A +++ RG+ +LH + H +LK NI ++ +++FG Y+
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 174
Query: 468 SANLAQALFAYKAPEA-IQSGKVTPKCDVYCLGIIILEILTGK 509
+ Y+APE +QS TP D++ +G I E+ K
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRK 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 40/210 (19%)
Query: 319 LGNGGLGSSYKA---MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
LG G GS + M + V +K +K+ + A DTE +R + ++ L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA----DTE----EMMREAQIMHQLDN 395
Query: 376 HY--------RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
Y + + +LV E GG L L G R +E+ +++ ++ G+ Y
Sbjct: 396 PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKY 451
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----------FYTMINSANLAQALFA 477
L + + H NL + N+ + + IS+FG +YT ++
Sbjct: 452 LEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP---LK 504
Query: 478 YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APE I K + + DV+ G+ + E L+
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 69 LTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTEL 127
LT +R L + L N E+P FD++ L + F +NK R ++P +F K+P L +L
Sbjct: 143 LTDMRNLSHLELRAN--IEEMPSHLFDDLENLESIEFGSNKLR-QMPRGIFGKMPKLKQL 199
Query: 128 HLESNQFNGTIPS--FDQPT-LVRLNLSSNKLEGEIP 161
+L SNQ ++P FD+ T L ++ L +N + P
Sbjct: 200 NLASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 65
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIG 426
L + ++ LV+E++ H D D + P + + +G+
Sbjct: 66 LLDVIHTENKLYLVFEHV---------HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPE 482
+ H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 117 FCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 483 AIQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 76 RAIYLDKNQFS-GEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQ 133
+ YLD S +P G FDE+ +L +L+ NK + LP +F KL LT L+L +NQ
Sbjct: 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQ 87
Query: 134 FNGTIPS--FDQPT-LVRLNLSSNKLE 157
++P+ FD+ T L L L++N+L+
Sbjct: 88 LQ-SLPNGVFDKLTQLKELALNTNQLQ 113
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLE 130
L L + L NQ +P G FD++ L++L + N+ + LP +F KL L +L L
Sbjct: 75 LTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLY 132
Query: 131 SNQFNGTIPS--FDQPT-LVRLNLSSNKLEGEIPASLLRFNASSFSGNAGLCGKNLG-VE 186
NQ ++P FD+ T L + L N + P +R+ + + ++G+ + G V
Sbjct: 133 QNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG--IRYLSEWINKHSGVVRNSAGSVA 189
Query: 187 CRNAKASAANKNI 199
+AK S + K +
Sbjct: 190 PDSAKCSGSGKPV 202
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 34/211 (16%)
Query: 319 LGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTE-----VRRLGRLRHSNV--L 370
+G G G+ YKA G V +K ++ + T +RRL H NV L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 371 APLAYHYRTDEKL---LVYEYIPGGSLLYLLHGDRGPSHDELTWPARL--KIVQGIARGI 425
+ RTD ++ LV+E++ YL D+ P PA +++ RG+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYL---DKAPPPG---LPAETIKDLMRQFLRGL 125
Query: 426 GYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA------YK 479
+LH + H +LK NI ++ +++FG + + ALF Y+
Sbjct: 126 DFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVVTLWYR 178
Query: 480 APEA-IQSGKVTPKCDVYCLGIIILEILTGK 509
APE +QS TP D++ +G I E+ K
Sbjct: 179 APEVLLQSTYATP-VDMWSVGCIFAEMFRRK 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 114/302 (37%), Gaps = 56/302 (18%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-------SHDELTWPARLKIVQGIA 422
L + L+V E+ G+L L R D LT + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 423 RGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANLAQ 473
+G+ +L A H +L + NI +S +N I +FG Y A L
Sbjct: 155 KGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP- 209
Query: 474 ALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAF 532
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 210 --LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFXRRL 260
Query: 533 SEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
EG R D PE+ + +L+ C +P QR E V + + Q+
Sbjct: 261 KEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQA 307
Query: 590 DG 591
+
Sbjct: 308 NA 309
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 316 AEVLGNGGLGSSYKA---MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
E +G G G YKA + + V + R+ + E+ L L H N++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIGY 427
L + ++ LV+E+ LH D D + P + + +G+ +
Sbjct: 68 LDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEA 483
H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 119 CHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 484 IQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 316 AEVLGNGGLGSSYKA---MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP 372
E +G G G YKA + + V + R+ + E+ L L H N++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 373 LAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDE-----LTWPARLKIVQGIARGIGY 427
L + ++ LV+E+ LH D D + P + + +G+ +
Sbjct: 67 LDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEA 483
H+ + H +LK N+ I+ E +++FG F + + Y+APE
Sbjct: 118 CHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 484 IQSGK-VTPKCDVYCLGIIILEILTGK--FP 511
+ K + D++ LG I E++T + FP
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 114/302 (37%), Gaps = 56/302 (18%)
Query: 319 LGNGGLGSSYKA------MMADGVTVVVKRMKESSAMARD-AFDTEVRRLGRL-RHSNVL 370
LG G G +A A TV VK +KE + + A +E++ L + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 APLAYHYRTDEKLLV-YEYIPGGSLLYLLHGDRGP-------SHDELTWPARLKIVQGIA 422
L + L+V E+ G+L L R D LT + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 423 RGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANLAQ 473
+G+ +L A H +L + NI +S +N I +FG Y A L
Sbjct: 155 KGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP- 209
Query: 474 ALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVASAF 532
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 210 --LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCRRL 260
Query: 533 SEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQQS 589
EG R D PE+ + +L+ C +P QR E V + + Q+
Sbjct: 261 KEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLLQA 307
Query: 590 DG 591
+
Sbjct: 308 NA 309
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--YTMINSA-NLA 472
KI I + + +LH++L+ + H ++K SN+ I+ + + +FG Y + + A ++
Sbjct: 113 KIAVSIVKALEHLHSKLSVI---HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169
Query: 473 QALFAYKAPEAI-----QSGKVTPKCDVYCLGIIILEILTGKFP 511
Y APE I Q G + K D++ LGI ++E+ +FP
Sbjct: 170 AGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 40/210 (19%)
Query: 319 LGNGGLGSSYKA---MMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAY 375
LG G GS + M + V +K +K+ + A DTE +R + ++ L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA----DTE----EMMREAQIMHQLDN 69
Query: 376 HY--------RTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
Y + + +LV E GG L L G R +E+ +++ ++ G+ Y
Sbjct: 70 PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKY 125
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFG----------FYTMINSANLAQALFA 477
L + + H +L + N+ + + IS+FG +YT ++
Sbjct: 126 LEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP---LK 178
Query: 478 YKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
+ APE I K + + DV+ G+ + E L+
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 318 VLGNGGLGSSYKAMM-ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRLRHSNVLAPLA 374
+G G G K +DG +V K + S + +EV L L+H N++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 375 YHYRTDEK-----LLVYEYIPGGSLLYLL-HGDRGPSHDELTWPARLKIVQGIARGIGYL 428
Y+ R ++ +V EY GG L ++ G + + + + R+ +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMIN-SANLAQALFA---YKAPEAI 484
++ H L H +LK +N+F+ + + +FG ++N + A+ Y +PE +
Sbjct: 130 RSDGGHTVL-HRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 485 QSGKVTPKCDVYCLGIIILEI 505
K D++ LG ++ E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 353 AFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWP 412
FD L + +N+L P+ Y + + V +Y+ G LLH D PS+ L
Sbjct: 89 VFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAE 145
Query: 413 ARLKIVQ-GIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANL 471
+K+ G++R +++ ++P +++ F +++P+++++
Sbjct: 146 CHVKVADFGLSR--SFVNIRRVTNNIPLSINENTENF--DDDQPILTDYV---------- 191
Query: 472 AQALFAYKAPEAIQ-SGKVTPKCDVYCLGIIILEILTGK--FPSQYLTNG----NGGIDV 524
A Y+APE + S K T D++ LG I+ EIL GK FP N G ID
Sbjct: 192 --ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDF 249
Query: 525 -----VEWVASAFSEGRVTDL 540
VE + S F++ + L
Sbjct: 250 PSNEDVESIQSPFAKTMIESL 270
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--YTMINSANLAQ 473
KI I + + +LH++L+ + H ++K SN+ I+ + + +FG Y + + A
Sbjct: 157 KIAVSIVKALEHLHSKLSVI---HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID 213
Query: 474 A-LFAYKAPEAI-----QSGKVTPKCDVYCLGIIILEILTGKFP 511
A Y APE I Q G + K D++ LGI ++E+ +FP
Sbjct: 214 AGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP 256
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 78 IYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQFNG 136
+YL NQ + ++ PG FD + L++L+ +N+ G LP +F L LT L L +NQ
Sbjct: 45 LYLHDNQIT-KLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT- 101
Query: 137 TIPS--FDQPT-LVRLNLSSNKLEGEIPASLLRFN 168
+PS FD+ L L + NKL E+P + R
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLT 135
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Query: 50 LYINSMGLSGKIDV---DALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFS 106
LY+ S L G + V D+LT+LT L L NQ + +P FD + L++L+
Sbjct: 69 LYLGSNQL-GALPVGVFDSLTQLTVLD------LGTNQLT-VLPSAVFDRLVHLKELFMC 120
Query: 107 NNKFRGRLPPSLFKLPHLTELHLESNQFNGTIP--SFDQ 143
NK LP + +L HLT L L+ NQ +IP +FD+
Sbjct: 121 CNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDR 157
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 317 EVLGNGGLGSSYKAMM-----ADGVTVVVKRMKESSAMA--RDAFDTEVRRLGRL-RHSN 368
+ LG G G +A D V V +M +S+A A ++A +E++ + L +H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 369 VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDR----GPS----------HDELTWPAR 414
++ L L++ EY G LL L GPS E P
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 415 LK----IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF-YTMINSA 469
L+ +A+G+ +L ++ + H ++ + N+ ++ + I +FG ++N +
Sbjct: 157 LRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 470 NL-----AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
N A+ + APE+I T + DV+ GI++ EI +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 40/187 (21%)
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANL 471
+A+G+ +L A H +L + NI +S +N I +FG Y A L
Sbjct: 209 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVAS 530
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 265 P---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCR 314
Query: 531 AFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQ 587
EG R D PE+ + +L+ C +P QR E V + +
Sbjct: 315 RLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLL 361
Query: 588 QSDGNMD 594
Q++ D
Sbjct: 362 QANAQQD 368
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 24/206 (11%)
Query: 318 VLGNGGLGSSYKAMMAD----GVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVL 370
VLG G G K M+++ VK +K+ + D + E R L L
Sbjct: 348 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L ++T ++L V EY+ GG L+Y + P + IA G+ +L
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQ 485
++ + + +LK N+ + E I++FG + F Y APE I
Sbjct: 460 SK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFP 511
D + G+++ E+L G+ P
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 40/187 (21%)
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANL 471
+A+G+ +L A H +L + NI +S +N I +FG Y A L
Sbjct: 207 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVAS 530
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 263 P---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCR 312
Query: 531 AFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQ 587
EG R D PE+ + +L+ C +P QR E V + +
Sbjct: 313 RLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLL 359
Query: 588 QSDGNMD 594
Q++ D
Sbjct: 360 QANAQQD 366
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 24/208 (11%)
Query: 318 VLGNGGLGSSYKAMMAD----GVTVVVKRMKESSAMARDAFD---TEVRRLGRLRHSNVL 370
VLG G G K M+++ VK +K+ + D + E R L L
Sbjct: 27 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 371 APLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
L ++T ++L V EY+ GG L+Y + P + IA G+ +L
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAIQ 485
++ + + +LK N+ + E I++FG + F Y APE I
Sbjct: 139 SK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 486 SGKVTPKCDVYCLGIIILEILTGKFPSQ 513
D + G+++ E+L G+ P +
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 66 LTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLT 125
+T L GL L+ +YLD NQ + P + L+ L NN+ P L L LT
Sbjct: 128 VTPLAGLSNLQVLYLDLNQITNISP---LAGLTNLQYLSIGNNQVNDLTP--LANLSKLT 182
Query: 126 ELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEGEIP 161
L + N+ + P P L+ ++L N++ P
Sbjct: 183 TLRADDNKISDISPLASLPNLIEVHLKDNQISDVSP 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDT----EVRRLGRLRHSNVL---- 370
+G G G A D V V +K+ S + E++ L R RH N++
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 371 ---APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
AP + + +V + + LY L + S+D + + + I RG+ Y
Sbjct: 89 IIRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKY 139
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YKA 480
+H+ ++ H +LK SN+ ++ + I +FG + + + Y+A
Sbjct: 140 IHSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP-SQYLTNGN 519
PE + + K T D++ +G I+ E+L+ + FP YL N
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDT----EVRRLGRLRHSNVL---- 370
+G G G A D V V +K+ S + E++ L R RH N++
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 371 ---APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
AP + + +V + + LY L + S+D + + + I RG+ Y
Sbjct: 89 IIRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKY 139
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YKA 480
+H+ ++ H +LK SN+ ++ + I +FG + + + Y+A
Sbjct: 140 IHSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP-SQYLTNGN 519
PE + + K T D++ +G I+ E+L+ + FP YL N
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 319 LGNGGLG---SSYKAMMADGVTVVVKRMK--ESSAMARDAFDTEVRRLGRLRHSNVL--- 370
+G G G S+Y + + V V +K++ E + E++ L R RH N++
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIGIN 91
Query: 371 ----APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
AP + + +V + + LY L + S+D + + + I RG+
Sbjct: 92 DIIRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLK 142
Query: 427 YLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YK 479
Y+H+ ++ H +LK SN+ ++ + I +FG + + + Y+
Sbjct: 143 YIHSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 480 APEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP-SQYLTNGN 519
APE + + K T D++ +G I+ E+L+ + FP YL N
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDT----EVRRLGRLRHSNVL---- 370
+G G G A D V V +K+ S + E++ L R RH N++
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 371 ---APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
AP + + +V + + LY L + S+D + + + I RG+ Y
Sbjct: 89 IIRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKY 139
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YKA 480
+H+ ++ H +LK SN+ ++ + I +FG + + + Y+A
Sbjct: 140 IHSA----NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTGK--FP-SQYLTNGN 519
PE + + K T D++ +G I+ E+L+ + FP YL N
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 317 EVLGNGGLG--SSYKAMMADGVTVVVKRMKESSAMARDAFDT--EVRRLGRLRHSNVLAP 372
E +GNG G SS + + G V +K++ + + +A T E++ L +H N++A
Sbjct: 61 ETIGNGAYGVVSSARRRLT-GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA- 118
Query: 373 LAYHYRTDEKLLVYEYIPGGS------LLYLLHGDRGP---SHDELTWPARLKIVQGIAR 423
K ++ +P G +L L+ D S LT + + R
Sbjct: 119 --------IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA------ 477
G+ Y+H+ + H +LK SN+ ++ E I +FG + ++ F
Sbjct: 171 GLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 478 --YKAPEAIQS-GKVTPKCDVYCLGIIILEILTGK--FPSQ 513
Y+APE + S + T D++ +G I E+L + FP +
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 317 EVLGNGGLG--SSYKAMMADGVTVVVKRMKESSAMARDAFDT--EVRRLGRLRHSNVLAP 372
E +GNG G SS + + G V +K++ + + +A T E++ L +H N++A
Sbjct: 60 ETIGNGAYGVVSSARRRLT-GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA- 117
Query: 373 LAYHYRTDEKLLVYEYIPGGS------LLYLLHGDRGP---SHDELTWPARLKIVQGIAR 423
K ++ +P G +L L+ D S LT + + R
Sbjct: 118 --------IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA------ 477
G+ Y+H+ + H +LK SN+ ++ E I +FG + ++ F
Sbjct: 170 GLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 478 --YKAPEAIQS-GKVTPKCDVYCLGIIILEILTGK--FPSQ 513
Y+APE + S + T D++ +G I E+L + FP +
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 69
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L + ++ LV+E++ ++ + + P + + +G+ + H+
Sbjct: 70 LLDVIHTENKLYLVFEHVDQDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQSG 487
+ H +LK N+ I+ E +++FG F + + Y+APE +
Sbjct: 126 ----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 488 K-VTPKCDVYCLGIIILEILTGK--FP 511
K + D++ LG I E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDT----EVRRLGRLRHSNVL---- 370
+G G G A D + V +K+ S + E++ L R RH N++
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 371 ---APLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
AP + + +V + + LY L + S+D + + + I RG+ Y
Sbjct: 93 IIRAPTIEQMK--DVYIVQDLMETD--LYKLLKTQHLSNDHICY-----FLYQILRGLKY 143
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA-------YKA 480
+H+ ++ H +LK SN+ ++ + I +FG + + + Y+A
Sbjct: 144 IHSA----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 481 PEAIQSGK-VTPKCDVYCLGIIILEILTGK--FPSQY 514
PE + + K T D++ +G I+ E+L+ + FP ++
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 19/130 (14%)
Query: 395 LYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENE 454
LY L + S+D + + + I RG+ Y+H+ ++ H +LK SN+ ++ ++
Sbjct: 114 LYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA----NVLHRDLKPSNLLLNTTSD 164
Query: 455 PLISEFGFYTMINSANLAQALFA-------YKAPEAIQSGK-VTPKCDVYCLGIIILEIL 506
I +FG + + + Y+APE + + K T D++ +G I+ E+L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 507 TGK--FPSQY 514
+ + FP ++
Sbjct: 225 SNRPIFPGKH 234
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 67
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L + ++ LV+E++ ++ + + P + + +G+ + H+
Sbjct: 68 LLDVIHTENKLYLVFEFLSMDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQSG 487
+ H +LK N+ I+ E +++FG F + + Y+APE +
Sbjct: 124 ----RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 488 K-VTPKCDVYCLGIIILEILTGK--FP 511
K + D++ LG I E++T + FP
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFP 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 339 VVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLL-VYEYIPGGSLLYL 397
VVK+ + D TE + + L L ++T+ +L V EY+ GG L++
Sbjct: 84 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 143
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLI 457
+ R + AR + I+ + YLH + + +LK N+ + E +
Sbjct: 144 MQRQRKLPEEH----ARFYSAE-ISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKL 194
Query: 458 SEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+++G + F Y APE ++ D + LG+++ E++ G+ P
Sbjct: 195 TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPE-NEPLISEFGFYTMINSANLAQALFA----- 477
G+ YLHT + HG++K+ N+ +S + + + +FG + L ++L
Sbjct: 162 GLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 478 ----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP-SQYL 515
+ APE + K D++ ++L +L G P +QY
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 69
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L + ++ LV+E++ ++ + + P + + +G+ + H+
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKKFM----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQSG 487
+ H +LK N+ I+ E +++FG F + + Y+APE +
Sbjct: 126 ----RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 488 K-VTPKCDVYCLGIIILEILTGK--FP 511
K + D++ LG I E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 339 VVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLL-VYEYIPGGSLLYL 397
VVK+ + D TE + + L L ++T+ +L V EY+ GG L++
Sbjct: 52 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 111
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLI 457
+ R + AR + I+ + YLH + + +LK N+ + E +
Sbjct: 112 MQRQRKLPEEH----ARFYSAE-ISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKL 162
Query: 458 SEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+++G + F Y APE ++ D + LG+++ E++ G+ P
Sbjct: 163 TDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPE-NEPLISEFGFYTMINSANLAQALFA----- 477
G+ YLHT + HG++K+ N+ +S + + + +FG + L ++L
Sbjct: 178 GLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 478 ----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP-SQYL 515
+ APE + K D++ ++L +L G P +QY
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 276
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPE-NEPLISEFGFYTMINSANLAQALFA----- 477
G+ YLHT + HG++K+ N+ +S + + + +FG + L ++L
Sbjct: 176 GLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 478 ----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP-SQYL 515
+ APE + K D++ ++L +L G P +QY
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 274
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 80 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 138
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 139 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-------YMPPEAIKDMSSSR 191
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 248
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 249 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 292
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 76 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 134
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 135 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-------YMPPEAIKDMSSSR 187
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 244
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 245 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 288
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 182
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 183 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-------YMPPEAIKDMSSSR 235
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 292
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 293 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 336
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 154
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 155 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-------YMPPEAIKDMSSSR 207
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 264
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 265 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 308
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 68
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L + ++ LV+E++ ++ + + P + + +G+ + H+
Sbjct: 69 LLDVIHTENKLYLVFEFLSMDLKDFM----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQSG 487
+ H +LK N+ I+ E +++FG F + + Y+APE +
Sbjct: 125 ----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 488 K-VTPKCDVYCLGIIILEILTGK--FP 511
K + D++ LG I E++T + FP
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFP 207
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 77 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 135
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 136 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-------YMPPEAIKDMSSSR 188
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 245
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 246 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 289
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 182
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 183 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-------YMPPEAIKDMSSSR 235
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 292
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 293 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 336
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 339 VVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLL-VYEYIPGGSLLYL 397
VVK+ + D TE + + L L ++T+ +L V EY+ GG L++
Sbjct: 37 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 96
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLI 457
+ R + AR + I+ + YLH + + +LK N+ + E +
Sbjct: 97 MQRQRKLPEEH----ARFYSAE-ISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKL 147
Query: 458 SEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+++G + F Y APE ++ D + LG+++ E++ G+ P
Sbjct: 148 TDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 316 AEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLA 371
E +G G G YKA G V +K+++ E+ + A E+ L L H N++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVK 69
Query: 372 PLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTE 431
L + ++ LV+E++ ++ + + P + + +G+ + H+
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKDFM----DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 432 LAHLDLPHGNLKSSNIFISPENEPLISEFG----FYTMINSANLAQALFAYKAPEAIQSG 487
+ H +LK N+ I+ E +++FG F + + Y+APE +
Sbjct: 126 ----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 488 K-VTPKCDVYCLGIIILEILTGK--FP 511
K + D++ LG I E++T + FP
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFP 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 339 VVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLL-VYEYIPGGSLLYL 397
VVK+ + D TE + + L L ++T+ +L V EY+ GG L++
Sbjct: 41 VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 100
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLI 457
+ R + AR + I+ + YLH + + +LK N+ + E +
Sbjct: 101 MQRQRKLPEEH----ARFYSAE-ISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKL 151
Query: 458 SEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
+++G + F Y APE ++ D + LG+++ E++ G+ P
Sbjct: 152 TDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 40/185 (21%)
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANL 471
+A+G+ +L A H +L + NI +S +N I +FG Y A L
Sbjct: 202 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVAS 530
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 258 P---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCR 307
Query: 531 AFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQ 587
EG R D PE+ + +L+ C +P QR E V + +
Sbjct: 308 RLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLL 354
Query: 588 QSDGN 592
Q++
Sbjct: 355 QANAQ 359
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF--YTMINSA-NLA 472
KI I + + +LH++L+ + H ++K SN+ I+ + +FG Y + + A ++
Sbjct: 140 KIAVSIVKALEHLHSKLSVI---HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 473 QALFAYKAPEAI-----QSGKVTPKCDVYCLGIIILEILTGKFP 511
Y APE I Q G + K D++ LGI +E+ +FP
Sbjct: 197 AGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFP 239
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 38/175 (21%)
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANL 471
+ARG+ +L + H +L + NI +S N I +FG Y L
Sbjct: 208 VARGMEFLSSR----KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT---GKFPSQYLTNGNGGIDVVEWV 528
+ APE+I + K DV+ G+++ EI + +P G+ + E
Sbjct: 264 P---LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP---------GVQMDEDF 311
Query: 529 ASAFSEGRVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRI 583
S EG + PE ++ ++ +I C DP++R E V ++
Sbjct: 312 CSRLREG--MRMRAPEYSTP--------EIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 303 KGVFGLPDLMKAAAEVLGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEV 358
K + LP + V G+G GS A+ G V +K++ +S A+ A+ E+
Sbjct: 17 KTAWELPKTYVSPTHV-GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-REL 74
Query: 359 RRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSL--LYLLHGDRGPSHDELTWPARLK 416
L ++H NV+ L+ + P SL Y + +L LK
Sbjct: 75 LLLKHMQHENVIG------------LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK 122
Query: 417 --------IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS 468
+V + +G+ Y+H+ + H +LK N+ ++ + E I +FG ++
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178
Query: 469 ANLAQALFA-YKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK 509
+ Y+APE I S D++ +G I+ E+LTGK
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 182
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + + N Y PEAI+ +
Sbjct: 183 PANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN-------YMPPEAIKDMSSSR 235
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 292
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 293 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 336
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 40/184 (21%)
Query: 421 IARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF---------YTMINSANL 471
+A+G+ +L A H +L + NI +S +N I +FG Y A L
Sbjct: 200 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 472 AQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGNGGIDVVEWVAS 530
+ APE I T + DV+ G+++ EI + G P G+ + E
Sbjct: 256 P---LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-------GVKIDEEFCR 305
Query: 531 AFSEG---RVTDLLDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRRIVEIQ 587
EG R D PE+ + +L+ C +P QR E V + +
Sbjct: 306 RLKEGTRMRAPDYTTPEMYQT---------MLD----CWHGEPSQRPTFSELVEHLGNLL 352
Query: 588 QSDG 591
Q++
Sbjct: 353 QANA 356
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 43/201 (21%)
Query: 383 LLVYEYIPGGSLLYLLH--GDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHG 440
L+V E + GG L + GD+ + E + +I++ I I YLH+ +++ H
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHS----INIAHR 141
Query: 441 NLKSSNIFISPENEPLI---SEFGFYTMINSANLAQALFAYKAPEAIQSGKVTPKCDVYC 497
++K N+ + + I ++FGF + K CD++
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGF------------------AKETTGEKYDKSCDMWS 183
Query: 498 LGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDLLDPEIASSTNSPGEMEQ 557
LG+I+ +L G +P Y N G+ + + + G+ + +PE + + E+
Sbjct: 184 LGVIMYILLCG-YPPFY---SNHGLAISPGMKTRIRMGQY-EFPNPEWSEVS------EE 232
Query: 558 LLEIGRACTQSDPEQRLEMRE 578
+ + R +++P QR+ + E
Sbjct: 233 VKMLIRNLLKTEPTQRMTITE 253
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALF 476
+V + +G+ Y+H+ + H +LK N+ ++ + E I +FG ++ +
Sbjct: 149 LVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 204
Query: 477 A-YKAPEAIQSG-KVTPKCDVYCLGIIILEILTGK 509
Y+APE I S D++ +G I+ E+LTGK
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 60 KIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
KID +A GL L+ + LD NQ +P G FD + +L+K+W N + P
Sbjct: 313 KIDDNAFW---GLTHLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 364
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 108 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 110 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 120 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 47 VTGLYINSMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFS 106
T L +N L G+I D L L L + L +NQ +G I P F+ +++L
Sbjct: 31 TTELLLNDNEL-GRISSDGL--FGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLG 86
Query: 107 NNKFRGRLPPSLFKLPHLTELHLESNQFNGTIP-SFDQ-PTLVRLNLSSNKLEGEIP--- 161
NK + L L L+L NQ + +P SF+ +L LNL+SN
Sbjct: 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146
Query: 162 -ASLLRFNASSFSGNAGLCG 180
A LR S +G A CG
Sbjct: 147 FAEWLR--KKSLNGGAARCG 164
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 114 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 130 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 130 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 128 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 120/297 (40%), Gaps = 43/297 (14%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVK--RMKESSAMARDAFDTEVRRLGRLR-HSNVLAPLAY 375
+G+GG ++ + +K ++E+ D++ E+ L +L+ HS+ + L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 376 HYRTDEKLLVYEYIPGGSLLYLLHGDRG--PSHDELTWPARLKIVQGIARGIGYLHTEL- 432
+ TD+ + + L L + P + W L+ V I + G +H++L
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLK 154
Query: 433 -AHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFAYKAPEAIQSGKVTP 491
A+ + G LK + I+ + +P + + + N Y PEAI+ +
Sbjct: 155 PANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVN-------YMPPEAIKDMSSSR 207
Query: 492 K-----------CDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEWVASAFSEGRVTDL 540
+ DV+ LG I+ + GK P Q + N I + + E D+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHEIEFPDI 264
Query: 541 LDPEIASSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR-IVEIQQSDGNMDAR 596
PE + L ++ + C + DP+QR+ + E + V+IQ N A+
Sbjct: 265 --PE-----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 308
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 114 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 31/170 (18%)
Query: 357 EVRRLGRLRHSNV--LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
E+ L +L H NV L + D +V+E + G ++ + P+ L+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSEDQA 139
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA 474
Q + +GI YLH + + H ++K SN+ + + I++FG + N + A
Sbjct: 140 RFYFQDLIKGIEYLHYQ----KIIHRDIKPSNLLVGEDGHIKIADFG---VSNEFKGSDA 192
Query: 475 LF-------AYKAPEA------IQSGKVTPKCDVYCLGIIILEILTGKFP 511
L A+ APE+ I SGK DV+ +G+ + + G+ P
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQCP 239
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 45/216 (20%)
Query: 412 PARL----KIVQGIARGIGYLHT-ELAHLDLPHGNL--------KSSNIFISPENEPLIS 458
P RL K+ I + + +LH+ +L H DL N+ ++ N I + LI+
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 459 ------EFGFYTMINSANLAQALF-AYKAPEAIQSGKVTPKCDVYCLGIIILEI------ 505
+FG T + + Y+APE I + + CDV+ +G I++E
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 506 ---------------LTGKFPSQYLTNGNG----GIDVVEWVASAFSEGRVTDLLDPEIA 546
+ G P + D ++W + + V+ P
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE 293
Query: 547 SSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
+ E E+L ++ + + DP +R+ +REA++
Sbjct: 294 FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 121/331 (36%), Gaps = 73/331 (22%)
Query: 310 DLMKAAAEVLGNGGLGSSYKAM----MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR 365
D ++ E++GN G G+ K + A G + V ++ + R+A E+ L +++
Sbjct: 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK 74
Query: 366 HSN-------VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
+ VL +++ + +E + + +L + P P +
Sbjct: 75 EKDKENKFLCVLMSDWFNFH-GHMCIAFELLGKNTFEFLKENNFQP----YPLPHVRHMA 129
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNI-FISPENEPLISEFGFY-------TMINSAN 470
+ + +LH L H +LK NI F++ E E L +E T I A+
Sbjct: 130 YQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVAD 185
Query: 471 LAQALF------------AYKAPEAIQSGKVTPKCDVYCLGIIILEI------------- 505
A F Y+ PE I CDV+ +G I+ E
Sbjct: 186 FGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245
Query: 506 --------LTGKFPSQYLTNG-------NGGIDVVEWVASAFSEGR-VTDLLDPEIASST 549
+ G PS + GG+ W ++ S+GR V + P +
Sbjct: 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL---VWDENS-SDGRYVKENCKPLKSYML 301
Query: 550 NSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
E QL ++ R + DP QR+ + EA+
Sbjct: 302 QDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 45/216 (20%)
Query: 412 PARL----KIVQGIARGIGYLHT-ELAHLDLPHGNL--------KSSNIFISPENEPLIS 458
P RL K+ I + + +LH+ +L H DL N+ ++ N I + LI+
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 459 ------EFGFYTMINSAN-LAQALFAYKAPEAIQSGKVTPKCDVYCLGIIILEI------ 505
+FG T + + + Y+APE I + + CDV+ +G I++E
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 506 ---------------LTGKFPSQYLTNGNG----GIDVVEWVASAFSEGRVTDLLDPEIA 546
+ G P + D ++W + + V+ P
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE 293
Query: 547 SSTNSPGEMEQLLEIGRACTQSDPEQRLEMREAVRR 582
+ E E+L ++ + + DP +R+ +REA++
Sbjct: 294 FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 121/331 (36%), Gaps = 73/331 (22%)
Query: 310 DLMKAAAEVLGNGGLGSSYKAM----MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR 365
D ++ E++GN G G+ K + A G + V ++ + R+A E+ L +++
Sbjct: 47 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK 106
Query: 366 HSN-------VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
+ VL +++ + +E + + +L + P P +
Sbjct: 107 EKDKENKFLCVLMSDWFNFH-GHMCIAFELLGKNTFEFLKENNFQP----YPLPHVRHMA 161
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNI-FISPENEPLISEFGFY-------TMINSAN 470
+ + +LH L H +LK NI F++ E E L +E T I A+
Sbjct: 162 YQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVAD 217
Query: 471 LAQALF------------AYKAPEAIQSGKVTPKCDVYCLGIIILEI------------- 505
A F Y+ PE I CDV+ +G I+ E
Sbjct: 218 FGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 277
Query: 506 --------LTGKFPSQYLTNG-------NGGIDVVEWVASAFSEGR-VTDLLDPEIASST 549
+ G PS + GG+ W ++ S+GR V + P +
Sbjct: 278 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL---VWDENS-SDGRYVKENCKPLKSYML 333
Query: 550 NSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
E QL ++ R + DP QR+ + EA+
Sbjct: 334 QDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 364
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 472 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 121/331 (36%), Gaps = 73/331 (22%)
Query: 310 DLMKAAAEVLGNGGLGSSYKAM----MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLR 365
D ++ E++GN G G+ K + A G + V ++ + R+A E+ L +++
Sbjct: 24 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIK 83
Query: 366 HSN-------VLAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIV 418
+ VL +++ + +E + + +L + P P +
Sbjct: 84 EKDKENKFLCVLMSDWFNFH-GHMCIAFELLGKNTFEFLKENNFQP----YPLPHVRHMA 138
Query: 419 QGIARGIGYLHTELAHLDLPHGNLKSSNI-FISPENEPLISEFGFY-------TMINSAN 470
+ + +LH L H +LK NI F++ E E L +E T I A+
Sbjct: 139 YQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVAD 194
Query: 471 LAQALF------------AYKAPEAIQSGKVTPKCDVYCLGIIILEI------------- 505
A F Y+ PE I CDV+ +G I+ E
Sbjct: 195 FGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 254
Query: 506 --------LTGKFPSQYLTNG-------NGGIDVVEWVASAFSEGR-VTDLLDPEIASST 549
+ G PS + GG+ W ++ S+GR V + P +
Sbjct: 255 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL---VWDENS-SDGRYVKENCKPLKSYML 310
Query: 550 NSPGEMEQLLEIGRACTQSDPEQRLEMREAV 580
E QL ++ R + DP QR+ + EA+
Sbjct: 311 QDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 341
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 357 EVRRLGRLRHSNV--LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPAR 414
E++ L RLRH NV L + Y+ + +V EY G L D P A
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPEKRFPVCQAH 112
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGF------YTMINS 468
Q + G+ YLH++ + H ++K N+ ++ IS G + ++
Sbjct: 113 GYFCQ-LIDGLEYLHSQ----GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
Query: 469 ANLAQALFAYKAPEAIQSGKVT---PKCDVYCLGIIILEILTGKFP 511
+Q A++ PE I +G T K D++ G+ + I TG +P
Sbjct: 168 CRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 415 LKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINS-ANLAQ 473
+++V ++ G+ YL + H +L + N+ + ++ IS+FG + + N +
Sbjct: 473 IELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 474 AL------FAYKAPEAIQSGKVTPKCDVYCLGIIILEILT 507
A + APE I K + K DV+ G+++ E +
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 352 DAFDTEVRRLGRLRHSNVLAPLAYHYRTDEKLLVYEYIPGGSLL----YLLHGDRGPSHD 407
D F E++ + +++ L DE ++YEY+ S+L Y D+ +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT-- 145
Query: 408 ELTWPARLK--IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFG--FY 463
P ++ I++ + Y+H E ++ H ++K SNI + +S+FG Y
Sbjct: 146 -CFIPIQVIKCIIKSVLNSFSYIHNE---KNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 464 TMINSANLAQALFAYKAPEAI--QSGKVTPKCDVYCLGIIILEILTGKFP 511
+ ++ + + PE +S K D++ LGI + + P
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 28/181 (15%)
Query: 344 KESSAMARDAFDTEVRRLGRLRHSNV------LAPLAYHYRTDEKLLVYEYIPGGSLLYL 397
K+ SA + E R L+H N+ ++ +HY LV++ + GG L
Sbjct: 67 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHY------LVFDLVTGGELFED 120
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPL- 456
+ S + + + I + ++H D+ H +LK N+ ++ + +
Sbjct: 121 IVAREYYSEADAS-----HCIHQILESVNHIHQH----DIVHRDLKPENLLLASKCKGAA 171
Query: 457 --ISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKF 510
+++FG + A FA Y +PE ++ D++ G+I+ +L G
Sbjct: 172 VKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 511 P 511
P
Sbjct: 232 P 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 78/208 (37%), Gaps = 61/208 (29%)
Query: 356 TEVRRLGRLRHSNVLAPLAYHYRTDEKL-LVYEYIPGGSLLYLL---------------- 398
TEVR + +L H N+ A L Y ++ + LV E GG LL L
Sbjct: 77 TEVRLMKKLHHPNI-ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 399 -------------------HGDRGPSHDELTWPARLKIVQGIARGI----GYLHTELAHL 435
HG R + L + R K++ I R I YLH +
Sbjct: 136 KTQICPCPECNEEAINGSIHGFR----ESLDFVQREKLISNIMRQIFSALHYLHNQ---- 187
Query: 436 DLPHGNLKSSNIFISPEN--EPLISEFG----FYTMINSANLAQALFA----YKAPEAIQ 485
+ H ++K N S E + +FG FY + N A + APE +
Sbjct: 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN 247
Query: 486 SGKVT--PKCDVYCLGIIILEILTGKFP 511
+ + PKCD + G+++ +L G P
Sbjct: 248 TTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 182
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 183 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 181
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 182 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 59 GKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSL 118
KID +A LT L L L +N F G I F+ + L L S N R S
Sbjct: 312 NKIDDNAFWGLTHLLKLN---LSQN-FLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSF 367
Query: 119 FKLPHLTELHLESNQFNGTIPS--FDQPT-LVRLNLSSNKLEGEIP 161
LP+L EL L++NQ ++P FD+ T L ++ L +N + P
Sbjct: 368 LGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 31/211 (14%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARD--AFDTEVRRLGRLRHSNV---- 369
E LG G + M + G K + ARD + E R L+H N+
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
++ +HY LV++ + GG L + S + + +Q I + +
Sbjct: 70 DSISEEGFHY------LVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNH 118
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H + H +LK N+ ++ +++ +++FG + A FA Y +
Sbjct: 119 CHLN----GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ D++ G+I+ +L G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPE-NEPLISEFGFYTMINSANLAQALFA----- 477
G+ YLH+ + HG++K+ N+ +S + + + +FG + L ++L
Sbjct: 197 GLEYLHSR----RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 478 ----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNG 518
+ APE + K DV+ ++L +L G P G
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 207
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 208 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 21/203 (10%)
Query: 317 EVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS------NV 369
+V+G G G KA V +K ++ R A + E+R L LR NV
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE-EIRILEHLRKQDKDNTMNV 161
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L + + +E + +L L+ ++ + P K I + + LH
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALH 217
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGF----YTMINSANLAQALFAYKAPEAIQ 485
+ H +LK NI + + I F Y Q+ F Y+APE I
Sbjct: 218 KN----RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-YRAPEVIL 272
Query: 486 SGKVTPKCDVYCLGIIILEILTG 508
+ D++ LG I+ E+LTG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 21/203 (10%)
Query: 317 EVLGNGGLGSSYKAMMAD-GVTVVVKRMKESSAMARDAFDTEVRRLGRLRHS------NV 369
+V+G G G KA V +K ++ R A + E+R L LR NV
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE-EIRILEHLRKQDKDNTMNV 161
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLH 429
+ L + + +E + +L L+ ++ + P K I + + LH
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALH 217
Query: 430 TELAHLDLPHGNLKSSNIFISPENEPLISEFGF----YTMINSANLAQALFAYKAPEAIQ 485
+ H +LK NI + + I F Y Q+ F Y+APE I
Sbjct: 218 KN----RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-YRAPEVIL 272
Query: 486 SGKVTPKCDVYCLGIIILEILTG 508
+ D++ LG I+ E+LTG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTG 295
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 428 LHTELAHLD---LPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQAL-----FAYK 479
L T LA+L+ H ++ + N+ +S + + +FG + + +A +
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILT-GKFPSQYLTNGN 519
APE+I + T DV+ G+ + EIL G P Q + N +
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 31/211 (14%)
Query: 317 EVLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARD--AFDTEVRRLGRLRHSNV---- 369
E LG G + M + G K + ARD + E R L+H N+
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
++ +HY LV++ + GG L + S + + +Q I + +
Sbjct: 70 DSISEEGFHY------LVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILESVNH 118
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H + H +LK N+ ++ +++ +++FG + A FA Y +
Sbjct: 119 CHLN----GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ D++ G+I+ +L G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 344 KESSAMARDAFDTEVRRLGRLRHSNV------LAPLAYHYRTDEKLLVYEYIPGGSLLYL 397
K+ SA + E R L+HSN+ ++ +HY LV++ + GG L
Sbjct: 40 KKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHY------LVFDLVTGGELFED 93
Query: 398 LHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPL- 456
+ S + + +Q I + + H + + H +LK N+ ++ + +
Sbjct: 94 IVAREYYSEADAS-----HCIQQILEAVLHCH----QMGVVHRDLKPENLLLASKCKGAA 144
Query: 457 --ISEFGFYTMINSANLAQALFA----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKF 510
+++FG + A FA Y +PE ++ D++ G+I+ +L G
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYP 204
Query: 511 P 511
P
Sbjct: 205 P 205
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 427 YLHTELAHLDLPHGN------LKSSNIFISPENEPLISEFGF----YTMINSANLAQALF 476
+ H+ L LD H N LK NI + + I F Y Q+ F
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF 264
Query: 477 AYKAPEAIQSGKVTPKCDVYCLGIIILEILTG 508
Y+APE I + D++ LG I+ E+LTG
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 66 LTELTGLRGLRAIYLDKNQFSGEIPPG------YFD-------------EMGALRKLWFS 106
+T L GL L+ +YLD NQ + P Y + L L
Sbjct: 122 VTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKAD 181
Query: 107 NNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEGE 159
+NK P L LP+L E+HL++NQ + P + L + L++ + +
Sbjct: 182 DNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQ 232
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G+I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPE-NEPLISEFGFYTMINSANLAQALFA----- 477
G+ YLH+ + HG++K+ N+ +S + + + +FG + L + L
Sbjct: 178 GLEYLHSR----RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 478 ----YKAPEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNG 518
+ APE + K DV+ ++L +L G P G
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 31/211 (14%)
Query: 317 EVLGNGGLG---SSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNV---- 369
E LG G K + ++ K+ SA + E R L+H N+
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
++ +HY L+++ + GG L + S + + +Q I + +
Sbjct: 77 DSISEEGHHY------LIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLH 125
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H + + H NLK N+ ++ + + +++FG + A FA Y +
Sbjct: 126 CH----QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ D++ G+I+ +L G P
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G+I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 416 KIVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFY-TMINSANLAQ- 473
KI + + +L +L + H ++K SNI + + +FG +++S +
Sbjct: 129 KITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD 185
Query: 474 -ALFAYKAPEAIQSGK----VTPKCDVYCLGIIILEILTGKFP 511
Y APE I + DV+ LGI + E+ TG+FP
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEF-GFYTMINSANLAQAL 475
I+QG+ + + Y+H H+ H ++K+S+I IS + + +S +MI+ + +
Sbjct: 117 ILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 172
Query: 476 FAYK----------APEAIQSG--KVTPKCDVYCLGIIILEILTGKFP 511
+ +PE +Q K D+Y +GI E+ G P
Sbjct: 173 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 417 IVQGIARGIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEF-GFYTMINSANLAQAL 475
I+QG+ + + Y+H H+ H ++K+S+I IS + + +S +MI+ + +
Sbjct: 133 ILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 188
Query: 476 ----------FAYKAPEAIQSG--KVTPKCDVYCLGIIILEILTGKFP 511
+ +PE +Q K D+Y +GI E+ G P
Sbjct: 189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 182 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 238
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 239 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 296
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 297 DISPISNLK 305
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 62 DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKL 121
D+ L LT L GL L NQ + +I P + L +L S+N +L L
Sbjct: 99 DITPLANLTNLTGLT---LFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI--SALSGL 150
Query: 122 PHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKL 156
L +L SNQ P + TL RL++SSNK+
Sbjct: 151 TSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKV 185
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 182 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 238
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 239 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 296
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 297 DISPISNLK 305
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 62 DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKL 121
D+ L LT L GL L NQ + +I P + L +L S+N +L L
Sbjct: 99 DITPLANLTNLTGLT---LFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI--SALSGL 150
Query: 122 PHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKL 156
L +L SNQ P + TL RL++SSNK+
Sbjct: 151 TSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKV 185
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 182 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 238
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 239 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 296
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 297 DISPISNLK 305
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 62 DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKL 121
D+ L LT L GL L NQ + +I P + L +L S+N +L L
Sbjct: 99 DITPLANLTNLTGLT---LFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI--SALSGL 150
Query: 122 PHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKL 156
L +L+ SNQ P + TL RL++SSNK+
Sbjct: 151 TSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKV 185
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 18 KALDSWMPSTAPCRGGEEEWSGVVCLKGIVTG---------LYINSMGLSGKIDVDALTE 68
+A S PS C G + SG L + TG LY N + D LT+
Sbjct: 5 RARGSACPSQCSCSGTTVDCSGK-SLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQ 63
Query: 69 LTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTEL 127
LT L LD NQ + +P G FD++ L +L ++N+ + +P F L LT +
Sbjct: 64 LTRLD------LDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKS-IPRGAFDNLKSLTHI 115
Query: 128 HLESNQFN 135
L +N ++
Sbjct: 116 WLLNNPWD 123
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 75 LRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
L+ + LD NQ +P G FD + +L+K+W N + P
Sbjct: 204 LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 243
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 75 LRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
L+ + LD NQ +P G FD + +L+K+W N + P
Sbjct: 203 LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 242
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 75 LRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
L+ + LD NQ +P G FD + +L+K+W N + P
Sbjct: 203 LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 242
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 75 LRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
L+ + LD NQ +P G FD + +L+K+W N + P
Sbjct: 202 LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 241
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 75 LRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
L+ + LD NQ +P G FD + +L+K+W N + P
Sbjct: 204 LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 243
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 181 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 237
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 238 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 295
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 296 DISPISNLK 304
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L L I NQ + P + L + +NN+ P L L +LT L L +
Sbjct: 62 LNNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 116
Query: 132 NQFNGTIPSFDQPTLVRLNLSSNKLEGEIPASLLRFNASSFSGNAGLCGKNLGVECRNAK 191
NQ P + L RL LSSN + + S+ SG L N G + + K
Sbjct: 117 NQITDIDPLKNLTNLNRLELSSNTIS----------DISALSGLTSLQQLNFGNQVTDLK 166
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 181 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 237
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 238 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 295
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 296 DISPISNLK 304
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L L I NQ + P + L + +NN+ P L L +LT L L +
Sbjct: 62 LNNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 116
Query: 132 NQFNGTIPSFDQPTLVRLNLSSNKLEGEIPASLLRFNASSFSGNAGLCGKNLGVECRNAK 191
NQ P + L RL LSSN + + S+ SG L N G + + K
Sbjct: 117 NQITDIDPLKNLTNLNRLELSSNTIS----------DISALSGLTSLQQLNFGNQVTDLK 166
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 186 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 242
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 300
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 301 DISPISNLK 309
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L L I NQ + P + L + +NN+ P L L +LT L L +
Sbjct: 67 LNNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121
Query: 132 NQFNGTIPSFDQPTLVRLNLSSNKL 156
NQ P + L RL LSSN +
Sbjct: 122 NQITDIDPLKNLTNLNRLELSSNTI 146
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 25/129 (19%)
Query: 58 SGKI-DVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF---DEMGA-------------- 99
S K+ D+ L +LT L L A NQ S P G DE+
Sbjct: 185 SNKVSDISVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 241
Query: 100 --LRKLWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLE 157
L L +NN+ P L L LTEL L +NQ + P L L L+ N+LE
Sbjct: 242 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLE 299
Query: 158 GEIPASLLR 166
P S L+
Sbjct: 300 DISPISNLK 308
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 72 LRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFKLPHLTELHLES 131
L L I NQ + P + L + +NN+ P L L +LT L L +
Sbjct: 66 LNNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 120
Query: 132 NQFNGTIPSFDQPTLVRLNLSSNKL 156
NQ P + L RL LSSN +
Sbjct: 121 NQITDIDPLKNLTNLNRLELSSNTI 145
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 317 EVLGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAPLAYH 376
+VLG+G G+ M D V VKR + + F R + LR S+ P
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKR------ILPECFSFADREVQLLRESDE-HPNVIR 82
Query: 377 YRTDEKLLVYEYIP---GGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHTELA 433
Y EK ++YI + L + +H L + ++Q G+ +LH+
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL---EPITLLQQTTSGLAHLHS--- 136
Query: 434 HLDLPHGNLKSSNIFISPEN-----EPLISEFGF 462
L++ H +LK NI IS N + +IS+FG
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 22/211 (10%)
Query: 316 AEVLGNGGLGSSYKAMMAD-----GVTVV-VKRMKESSAMARDAFDTEVRRLGRLRHSNV 369
EV+G G + + + V +V V + S ++ + E L+H ++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ L + +V+E++ G L + + D G + E ++ I + Y
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QILEALRY 145
Query: 428 LHTELAHLDLPHGNLKSSNIFI-SPENE-PL-ISEFGFYTMINSANLAQA----LFAYKA 480
H ++ H ++K N+ + S EN P+ + +FG + + L + A
Sbjct: 146 CHDN----NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ DV+ G+I+ +L+G P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGIDVVEWVASAF 532
PE I D++ +G I+ E++ K FP + Y+ N I+ + AF
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAF 248
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 131 GIKHLHSA----GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 69 LTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
L + GL + +NQ +P G FD + +L+K+W N + P
Sbjct: 273 LNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 318
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 318 VLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNV-----LA 371
++G G G KA + V +K +K A A EVR L + + +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMNKHDTEMKYYIV 119
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L H+ L LV+E + +L LL R + ++ K Q + + +L T
Sbjct: 120 HLKRHFMFRNHLCLVFEML-SYNLYDLL---RNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 431 ELAHLDLPHGNLKSSNIFI-SPENEPL-ISEFGFYTMINSANLAQALFA------YKAPE 482
L + H +LK NI + +P+ + I +FG +S L Q ++ Y++PE
Sbjct: 176 --PELSIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQXIQSRFYRSPE 228
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGK 509
+ D++ LG I++E+ TG+
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YK 479
GI +LH+ + H +LK SNI + + I +FG S N + Y+
Sbjct: 136 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGL-ARTASTNFMMTPYVVTRYYR 190
Query: 480 APEAIQSGKVTPKCDVYCLGIIILEILTGKFPSQYLTNGNGGIDVVEW 527
APE I D++ +G I+ E++ G Q G ID +W
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ----GTDHID--QW 232
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 318 VLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNV-----LA 371
++G G G KA + V +K +K A A EVR L + + +
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMNKHDTEMKYYIV 100
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L H+ L LV+E + +L LL R + ++ K Q + + +L T
Sbjct: 101 HLKRHFMFRNHLCLVFEML-SYNLYDLL---RNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 431 ELAHLDLPHGNLKSSNIFI-SPENEPL-ISEFGFYTMINSANLAQALFA------YKAPE 482
L + H +LK NI + +P+ + I +FG +S L Q ++ Y++PE
Sbjct: 157 --PELSIIHCDLKPENILLCNPKRSAIKIVDFG-----SSCQLGQRIYQXIQSRFYRSPE 209
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGK 509
+ D++ LG I++E+ TG+
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 32.3 bits (72), Expect = 0.71, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 25 PSTAPCRGGEEEWSGVVCLKGIVTG---------LYINSMGLSGKIDVDALTELTGLRGL 75
PS C G + SG L + TG LY N + D LT+LT L
Sbjct: 4 PSQCSCSGTTVDCSGK-SLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLD-- 60
Query: 76 RAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQF 134
LD NQ + +P G FD++ L +L ++N+ + +P F L LT + L +N +
Sbjct: 61 ----LDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKS-IPRGAFDNLKSLTHIWLLNNPW 114
Query: 135 N 135
+
Sbjct: 115 D 115
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 318 VLGNGGLGSSYKAM-MADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNV-----LA 371
++G G G KA + V +K +K A A EVR L + + +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-QIEVRLLELMNKHDTEMKYYIV 119
Query: 372 PLAYHYRTDEKL-LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYLHT 430
L H+ L LV+E + +L LL R + ++ K Q + + +L T
Sbjct: 120 HLKRHFMFRNHLCLVFEML-SYNLYDLL---RNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 431 ELAHLDLPHGNLKSSNIFI-SPENEPL-ISEFGFYTMINSANLAQALFA------YKAPE 482
L + H +LK NI + +P+ + I +FG +S L Q ++ Y++PE
Sbjct: 176 --PELSIIHCDLKPENILLCNPKRXAIKIVDFG-----SSCQLGQRIYQXIQSRFYRSPE 228
Query: 483 AIQSGKVTPKCDVYCLGIIILEILTGK 509
+ D++ LG I++E+ TG+
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 139 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 240
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 139 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 240
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 132 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 137 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 192
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 238
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 132 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 233
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP---LAY 375
LG G + + + G V ++ +S+ + E+R L +R+S+ P +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 104
Query: 376 HYRTDEKL---------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
D K+ +V+E + L +++ + + L P KI+Q + +G+
Sbjct: 105 QLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN----YQGLPLPCVKKIIQQVLQGLD 160
Query: 427 YLHTELAHLDLPHGNLKSSNIFIS 450
YLHT+ + H ++K NI +S
Sbjct: 161 YLHTKCR---IIHTDIKPENILLS 181
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 131 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 140 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRA 195
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 196 PEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 58 SGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPS 117
+G ++ L EL L L AIY D N ++P D +L + NN P
Sbjct: 180 AGNNQLEELPELQNLPFLTAIYADNNSL-KKLP----DLPLSLESIVAGNNILEEL--PE 232
Query: 118 LFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKLEG--EIPASLLRFNASS--FS 173
L LP LT ++ ++N T+P P+L LN+ N L E+P SL + S FS
Sbjct: 233 LQNLPFLTTIYADNNLL-KTLPDL-PPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFS 290
Query: 174 G 174
G
Sbjct: 291 G 291
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 30/125 (24%)
Query: 57 LSGKIDVDALTELTGLRGLRAIYLDKNQFSG--EIPP---------GYFDEMGALRK--- 102
++G ++ L EL L L IY D N ++PP Y ++ L +
Sbjct: 221 VAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLT 280
Query: 103 -LWFSNNKFRG--RLPPSLFKLPHLTELHLESNQFNG--TIPSFDQPTLVRLNLSSNKLE 157
L S N F G LPP+L+ L + SN+ +P P+L LN+S+NKL
Sbjct: 281 FLDVSENIFSGLSELPPNLYYL------NASSNEIRSLCDLP----PSLEELNVSNNKL- 329
Query: 158 GEIPA 162
E+PA
Sbjct: 330 IELPA 334
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 176 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 239
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 139 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 143 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 198
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 244
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 32.0 bits (71), Expect = 0.93, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 25 PSTAPCRGGEEEWSGVVCLKGIVTG---------LYINSMGLSGKIDVDALTELTGLRGL 75
PS C G + SG L + TG LY N + D LT+LT L
Sbjct: 4 PSQCSCSGTTVDCSGK-SLASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLD-- 60
Query: 76 RAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQF 134
LD NQ + +P G FD++ L +L ++N+ + +P F L LT + L +N +
Sbjct: 61 ----LDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKS-IPRGAFDNLRSLTHIWLLNNPW 114
Query: 135 N 135
+
Sbjct: 115 D 115
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 176 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 319 LGNGGLGSSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNVLAP---LAY 375
LG G + + + G V ++ +S+ + E+R L +R+S+ P +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 88
Query: 376 HYRTDEKL---------LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIG 426
D K+ +V+E + L +++ + + L P KI+Q + +G+
Sbjct: 89 QLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN----YQGLPLPCVKKIIQQVLQGLD 144
Query: 427 YLHTELAHLDLPHGNLKSSNIFIS 450
YLHT+ + H ++K NI +S
Sbjct: 145 YLHTKCR---IIHTDIKPENILLS 165
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 71 GLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNK 109
GL L+ +YL+ N + +PPG F + ALR L ++N+
Sbjct: 478 GLSHLQVLYLNHN-YLNSLPPGVFSHLTALRGLSLNSNR 515
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 43 LKGIVTGLYINSMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRK 102
+G+V Y+N +G+ D+ LT L L L L N+ I PG F + +LRK
Sbjct: 152 FEGLVNLRYLN-LGMCNLKDIPNLTALVRLEELE---LSGNRLD-LIRPGSFQGLTSLRK 206
Query: 103 LWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKL 156
LW L H +E N F+ D +L LNLS N L
Sbjct: 207 LW----------------LMHAQVATIERNAFD------DLKSLEELNLSHNNL 238
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 54 SMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGR 113
S L KI+V A GL L + L N+ + +P F+ + LR+LW NN
Sbjct: 67 SKNLVRKIEVGAFN---GLPSLNTLELFDNRLTT-VPTQAFEYLSKLRELWLRNNPIES- 121
Query: 114 LPPSLF-KLPHLTELHL 129
+P F ++P L L L
Sbjct: 122 IPSYAFNRVPSLRRLDL 138
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 39 GVVCLKGI--VTGLY-INSMGLSG-KIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF 94
G+ LK I +T L + + LSG ++D+ GL LR ++L Q + I F
Sbjct: 164 GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAF 222
Query: 95 DEMGALRKLWFSNNKFRGRLPPSLFKLPH-LTELHLESNQFN 135
D++ +L +L S+N LP LF H L +HL N ++
Sbjct: 223 DDLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHNPWH 263
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 132 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGK--FPSQ-YLTNGNGGID 523
PE I D++ +G I+ E++ K FP + Y+ N I+
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 233
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 67 TELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLP 115
T L L+ + + NQ +P G FD + +L+K+W N + P
Sbjct: 488 TAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 43 LKGIVTGLYINSMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRK 102
+G+V Y+N +G+ D+ LT L L L L N+ I PG F + +LRK
Sbjct: 152 FEGLVNLRYLN-LGMCNLKDIPNLTALVRLEELE---LSGNRLDL-IRPGSFQGLTSLRK 206
Query: 103 LWFSNNKFRGRLPPSLFKLPHLTELHLESNQFNGTIPSFDQPTLVRLNLSSNKL 156
LW L H +E N F+ D +L LNLS N L
Sbjct: 207 LW----------------LMHAQVATIERNAFD------DLKSLEELNLSHNNL 238
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 54 SMGLSGKIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGR 113
S L KI+V A GL L + L N+ + +P F+ + LR+LW NN
Sbjct: 67 SKNLVRKIEVGAFN---GLPSLNTLELFDNRLTT-VPTQAFEYLSKLRELWLRNNPIES- 121
Query: 114 LPPSLF-KLPHLTELHL 129
+P F ++P L L L
Sbjct: 122 IPSYAFNRVPSLRRLDL 138
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 39 GVVCLKGI--VTGLY-INSMGLSG-KIDVDALTELTGLRGLRAIYLDKNQFSGEIPPGYF 94
G+ LK I +T L + + LSG ++D+ GL LR ++L Q + I F
Sbjct: 164 GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAF 222
Query: 95 DEMGALRKLWFSNNKFRGRLPPSLFKLPH-LTELHLESNQFN 135
D++ +L +L S+N LP LF H L +HL N ++
Sbjct: 223 DDLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHNPWH 263
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 319 LGNGGLGSSYKAM-MADGVTVVVKRMK---ESSAMARDAFDTEVRRLGRLRHSNVLAPLA 374
+G+G G A G+ V VK++ ++ A+ A+ E+ L + H N+++ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLN 90
Query: 375 YH--YRTDEKL----LVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGYL 428
+T E+ LV E + +L ++H + H+ +++ ++ + GI +L
Sbjct: 91 VFTPQKTLEEFQDVYLVMELM-DANLCQVIHMEL--DHERMSY-----LLYQMLCGIKHL 142
Query: 429 HTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA----YKAPEAI 484
H+ + H +LK SNI + + I +FG N + Y+APE I
Sbjct: 143 HSA----GIIHRDLKPSNIVVKSDCTLKILDFGL-ARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 485 QSGKVTPKCDVYCLGIIILEILTG 508
D++ +G I+ E++ G
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 31/211 (14%)
Query: 317 EVLGNGGLG---SSYKAMMADGVTVVVKRMKESSAMARDAFDTEVRRLGRLRHSNV---- 369
E LG G K + + K+ SA + E R L+H N+
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 370 --LAPLAYHYRTDEKLLVYEYIPGGSLLYLLHGDRGPSHDELTWPARLKIVQGIARGIGY 427
++ +HY L+++ + GG L + S + + +Q I + +
Sbjct: 88 DSISEEGHHY------LIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLH 136
Query: 428 LHTELAHLDLPHGNLKSSNIFISPENEPL---ISEFGFYTMINSANLAQALFA----YKA 480
H + + H +LK N+ ++ + + +++FG + A FA Y +
Sbjct: 137 CH----QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 192
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
PE ++ D++ G+I+ +L G P
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 424 GIGYLHTELAHLDLPHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQALFA---YKA 480
GI +LH+ + H +LK SNI + + I +FG ++ + Y+A
Sbjct: 138 GIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRA 193
Query: 481 PEAIQSGKVTPKCDVYCLGIIILEILTG 508
PE I D++ +G I+ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 33/135 (24%)
Query: 25 PSTAPCRGGEEEWSGVVC----LKGIVTGLYINSMGLS---GKIDVDALTELTGLRGLRA 77
PS C ++S V+C L+ + G+ N+ L+ +I + + LR L
Sbjct: 36 PSVCSC---SNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEI 92
Query: 78 IYLDKNQ--------FSG---------------EIPPGYFDEMGALRKLWFSNNKFRGRL 114
+ L +N F+G IP G F + L++LW NN
Sbjct: 93 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 152
Query: 115 PPSLFKLPHLTELHL 129
+ ++P L L L
Sbjct: 153 SYAFNRIPSLRRLDL 167
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 25 PSTAPCRGGE---EEWSGVVCLKGIVTG-----LYINSMGLSGKIDVDALTELTGLRGLR 76
PS C G +E S GI T LYIN + D+LT+LT L
Sbjct: 14 PSQCSCSGTTVNCQERSLASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLN--- 70
Query: 77 AIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLF-KLPHLTELHLESNQFN 135
L NQ + +P G FD++ L L N+ + +P +F L LT ++L +N ++
Sbjct: 71 ---LAVNQLTA-LPVGVFDKLTKLTHLALHINQLKS-IPMGVFDNLKSLTHIYLFNNPWD 125
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 20/210 (9%)
Query: 316 AEVLGNGGLGSSYKAMMAD-----GVTVV-VKRMKESSAMARDAFDTEVRRLGRLRHSNV 369
EV+G G + + + V +V V + S ++ + E L+H ++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ L + +V+E++ G L + + D G + E ++ I + Y
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QILEALRY 147
Query: 428 LH-TELAHLDL-PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA----LFAYKAP 481
H + H D+ PH L +S +P + FG + + L + AP
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVK---LGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
E ++ DV+ G+I+ +L+G P
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 20/210 (9%)
Query: 316 AEVLGNGGLGSSYKAMMAD-----GVTVV-VKRMKESSAMARDAFDTEVRRLGRLRHSNV 369
EV+G G + + + V +V V + S ++ + E L+H ++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 370 LAPLAYHYRTDEKLLVYEYIPGGSLLYLL--HGDRGPSHDELTWPARLKIVQGIARGIGY 427
+ L + +V+E++ G L + + D G + E ++ I + Y
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QILEALRY 145
Query: 428 LH-TELAHLDL-PHGNLKSSNIFISPENEPLISEFGFYTMINSANLAQA----LFAYKAP 481
H + H D+ PH L +S +P + FG + + L + AP
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVK---LGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 482 EAIQSGKVTPKCDVYCLGIIILEILTGKFP 511
E ++ DV+ G+I+ +L+G P
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 LTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFK-LPHLTEL 127
L GL L+ +YL N+ +PPG L KL +NN+ LP L L +L L
Sbjct: 120 LRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTL 177
Query: 128 HLESNQFNGTIP 139
L+ N TIP
Sbjct: 178 LLQENSLY-TIP 188
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 LTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFK-LPHLTEL 127
L GL L+ +YL N+ +PPG L KL +NN+ LP L L +L L
Sbjct: 120 LRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTL 177
Query: 128 HLESNQFNGTIP 139
L+ N TIP
Sbjct: 178 LLQENSLY-TIP 188
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 LTGLRGLRAIYLDKNQFSGEIPPGYFDEMGALRKLWFSNNKFRGRLPPSLFK-LPHLTEL 127
L GL L+ +YL N+ +PPG L KL +NN+ LP L L +L L
Sbjct: 120 LRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTL 177
Query: 128 HLESNQFNGTIP 139
L+ N TIP
Sbjct: 178 LLQENSLY-TIP 188
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,936,790
Number of Sequences: 62578
Number of extensions: 692250
Number of successful extensions: 3170
Number of sequences better than 100.0: 960
Number of HSP's better than 100.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 772
Number of HSP's that attempted gapping in prelim test: 2182
Number of HSP's gapped (non-prelim): 1060
length of query: 621
length of database: 14,973,337
effective HSP length: 105
effective length of query: 516
effective length of database: 8,402,647
effective search space: 4335765852
effective search space used: 4335765852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)