BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045654
MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAF
NSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNL
LIIWPTGIEAFKEMESL

High Scoring Gene Products

Symbol, full name Information P value
AT1G73740 protein from Arabidopsis thaliana 2.1e-20

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045654
        (137 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2027764 - symbol:AT1G73740 species:3702 "Arabi...   152  2.1e-20   3


>TAIR|locus:2027764 [details] [associations]
            symbol:AT1G73740 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0005975
            "carbohydrate metabolic process" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=ISS] [GO:0016757 "transferase
            activity, transferring glycosyl groups" evidence=ISS] [GO:0016758
            "transferase activity, transferring hexosyl groups" evidence=IEA]
            [GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0030259 "lipid
            glycosylation" evidence=IEA] [GO:0009693 "ethylene biosynthetic
            process" evidence=RCA] HAMAP:MF_00033 InterPro:IPR004276
            InterPro:IPR006009 InterPro:IPR007235 Pfam:PF03033 Pfam:PF04101
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0030246 GO:GO:0030259
            eggNOG:COG0707 EMBL:AC012679 CAZy:GT28 GO:GO:0019277
            HOGENOM:HOG000218323 KO:K02563 OMA:DDHQTKN GO:GO:0050511
            PANTHER:PTHR21015:SF22 EMBL:AY059826 EMBL:AY064640 IPI:IPI00522456
            PIR:F96764 RefSeq:NP_177515.1 UniGene:At.17988
            ProteinModelPortal:Q9C9T8 STRING:Q9C9T8 PaxDb:Q9C9T8 PRIDE:Q9C9T8
            EnsemblPlants:AT1G73740.1 GeneID:843709 KEGG:ath:AT1G73740
            TAIR:At1g73740 InParanoid:Q9C9T8 PhylomeDB:Q9C9T8
            ProtClustDB:CLSN2679890 Genevestigator:Q9C9T8 Uniprot:Q9C9T8
        Length = 431

 Score = 152 (58.6 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
 Identities = 29/64 (45%), Positives = 39/64 (60%)

Query:    39 DQVPGIANWVLSFFAHKVFVAFNSTTECFSRK--DKCVACGNPVRLSLMTYVSKVVARLN 96
             D +PG  NW+LSFFA  +F  FN T     ++   KCV  GNP+R +L  Y SK  AR++
Sbjct:   180 DSIPGTTNWILSFFADTIFAPFNCTVTNLPKRVAAKCVVYGNPIRQTLRRYSSKGAARVS 239

Query:    97 FFSR 100
             FF +
Sbjct:   240 FFGQ 243

 Score = 78 (32.5 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query:   109 CEDGMLLEKHNLLIIWPTGIEAFKEMESL 137
             C   +L E  N   +W TG+EAF EM+SL
Sbjct:   273 CYSQLLSEHENWFFVWQTGVEAFDEMDSL 301

 Score = 57 (25.1 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query:     1 MESTSVPFAGYDFVSVPII 19
             MEST+VP AG+DF ++  +
Sbjct:    94 MESTTVPSAGFDFSTISTV 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       137   0.00091  102 3  11 22  0.38    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.35u 0.14s 13.49t   Elapsed:  00:00:00
  Total cpu time:  13.35u 0.14s 13.49t   Elapsed:  00:00:00
  Start:  Tue May 21 03:11:08 2013   End:  Tue May 21 03:11:08 2013

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