Query 045655
Match_columns 377
No_of_seqs 322 out of 1599
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 06:47:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045655.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045655hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 1.1E-32 3.7E-37 268.0 12.1 119 256-377 2-120 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 1.9E-32 6.4E-37 266.5 11.8 120 255-377 5-124 (319)
3 1x91_A Invertase/pectin methyl 100.0 7.3E-31 2.5E-35 228.9 13.9 145 35-194 5-149 (153)
4 1xg2_B Pectinesterase inhibito 100.0 5.7E-31 1.9E-35 229.2 12.8 147 35-194 3-149 (153)
5 3grh_A YBHC, acyl-COA thioeste 100.0 3.4E-31 1.2E-35 263.3 10.1 121 255-377 73-235 (422)
6 2cj4_A Invertase inhibitor; pr 100.0 8.3E-30 2.8E-34 221.6 12.4 145 35-195 4-149 (150)
7 2nsp_A Pectinesterase A; micha 100.0 9.6E-29 3.3E-33 242.6 9.1 116 256-377 3-142 (342)
8 3uw0_A Pectinesterase; right-h 99.9 1.8E-28 6E-33 242.1 10.0 117 255-377 29-168 (364)
9 1ru4_A Pectate lyase, PEL9A; p 99.0 1.2E-09 4.1E-14 109.2 12.6 105 255-375 13-137 (400)
10 1dbg_A Chondroitinase B; beta 98.6 1.1E-07 3.7E-12 97.6 8.8 80 258-361 25-108 (506)
11 2inu_A Insulin fructotransfera 97.5 9.8E-05 3.4E-09 73.1 5.6 81 290-373 58-167 (410)
12 2pyg_A Poly(beta-D-mannuronate 96.6 0.0039 1.3E-07 60.7 7.4 52 268-327 18-78 (377)
13 1pxz_A Major pollen allergen J 93.5 0.12 4E-06 50.3 6.7 69 270-360 56-127 (346)
14 3eqn_A Glucan 1,3-beta-glucosi 93.1 0.42 1.4E-05 50.7 10.6 58 269-329 66-129 (758)
15 1bhe_A PEHA, polygalacturonase 90.2 1.2 4.2E-05 43.3 9.8 52 258-318 14-69 (376)
16 1idk_A Pectin lyase A; signal, 89.5 0.47 1.6E-05 46.3 6.0 41 302-359 103-145 (359)
17 1qcx_A Pectin lyase B; beta-he 88.5 0.93 3.2E-05 44.1 7.4 37 310-360 108-146 (359)
18 1vcl_A Hemolytic lectin CEL-II 88.0 0.0041 1.4E-07 62.4 -10.0 92 260-362 295-395 (432)
19 1hg8_A Endopolygalacturonase; 87.9 0.63 2.1E-05 45.1 5.7 29 268-301 7-35 (349)
20 2iq7_A Endopolygalacturonase; 87.7 0.4 1.4E-05 46.2 4.2 84 269-361 8-123 (339)
21 1h80_A IOTA-carrageenase; hydr 85.5 1.7 5.7E-05 43.8 7.5 43 268-317 38-81 (464)
22 1nhc_A Polygalacturonase I; be 84.9 0.65 2.2E-05 44.6 4.0 83 269-360 8-122 (336)
23 1ia5_A Polygalacturonase; glyc 84.2 0.74 2.5E-05 44.3 4.1 84 269-361 12-127 (339)
24 3zsc_A Pectate trisaccharide-l 84.0 2 6.9E-05 41.5 7.0 53 289-360 47-104 (340)
25 1pcl_A Pectate lyase E; lyase 83.9 3.5 0.00012 40.0 8.7 42 302-360 75-117 (355)
26 3eqn_A Glucan 1,3-beta-glucosi 83.1 2.6 8.8E-05 44.8 7.8 76 268-357 416-498 (758)
27 3gq8_A Preneck appendage prote 82.5 1 3.4E-05 46.9 4.4 45 270-327 40-86 (609)
28 2o04_A Pectate lyase, PL; hexa 81.8 4 0.00014 40.2 8.3 38 309-360 126-163 (399)
29 1pe9_A Pectate lyase A; parall 81.7 3.7 0.00013 40.0 7.9 56 287-360 52-127 (361)
30 1air_A Pectate lyase C, PELC; 79.1 3.2 0.00011 40.2 6.5 75 268-359 25-123 (353)
31 1czf_A Polygalacturonase II; b 77.4 2.1 7.1E-05 41.6 4.6 41 269-318 35-76 (362)
32 3vmv_A Pectate lyase; polysacc 74.7 10 0.00035 36.2 8.6 71 271-360 30-116 (326)
33 1rmg_A Rgase A, rhamnogalactur 73.7 5.7 0.00019 39.3 6.8 42 269-318 37-80 (422)
34 3gqn_A Preneck appendage prote 69.5 2.2 7.4E-05 45.4 2.7 45 269-326 39-85 (772)
35 2qy1_A Pectate lyase II; GAG l 68.3 10 0.00034 36.3 7.0 66 270-360 24-108 (330)
36 1vbl_A Pectate lyase 47; PL 47 65.3 18 0.0006 35.8 8.2 42 302-360 127-169 (416)
37 2uvf_A Exopolygalacturonase; G 57.3 15 0.00053 38.0 6.4 40 269-318 173-213 (608)
38 1k5c_A Endopolygalacturonase; 55.4 7.7 0.00026 37.1 3.5 40 269-318 8-47 (335)
39 2vbk_A Tailspike-protein; vira 44.0 16 0.00053 36.7 3.6 46 268-320 67-118 (514)
40 3jur_A EXO-poly-alpha-D-galact 33.6 25 0.00085 35.0 3.3 41 270-318 45-86 (448)
41 2x6w_A Tail spike protein; vir 28.9 60 0.0021 33.5 5.3 43 268-318 63-119 (600)
42 1x0c_A Isopullulanase; glycosi 25.1 51 0.0017 33.6 4.0 17 344-360 290-306 (549)
43 3cjh_B Mitochondrial import in 23.5 1.3E+02 0.0045 21.1 4.9 30 97-126 33-62 (64)
44 1r7c_A Genome polyprotein; mem 21.2 51 0.0017 20.2 1.8 12 139-150 16-27 (31)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=99.98 E-value=1.1e-32 Score=268.00 Aligned_cols=119 Identities=48% Similarity=0.786 Sum_probs=114.4
Q ss_pred eeEEEEccCCCCCcccHHHHHhhCCCCCCCCCceEEEEEecceeeeEEeeCCCCCceEEEecCCCceEEEccccccCCCC
Q 045655 256 TDIVTVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVVDGWT 335 (377)
Q Consensus 256 ~~~~~V~~dg~g~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~ 335 (377)
+++++|++||+|+|+|||+||+++|++ +++|++|+|+||+|+|+|+|++.|+||+|+|+|+++|+|+|+++..+|++
T Consensus 2 ~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~ 78 (317)
T 1xg2_A 2 IANAVVAQDGTGDYQTLAEAVAAAPDK---SKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGST 78 (317)
T ss_dssp CCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCC
T ss_pred CceEEECCCCCCCcccHHHHHhhcccC---CCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCc
Confidence 468999999999999999999999998 68899999999999999999999999999999999999999999889999
Q ss_pred CCcceeEEEEcCCEEEEcceEEeCCCCCCCceEEEEecCCCC
Q 045655 336 TFNSATFIVVAPNFVASSITFRNTAGPSKGQAVALRSGADFS 377 (377)
Q Consensus 336 t~~sat~~v~~~~f~~~~it~~Ntag~~~~QAvAl~v~~D~~ 377 (377)
|+.|+||.|.+++|+++||||+|++|+.++|||||+++||++
T Consensus 79 t~~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~ 120 (317)
T 1xg2_A 79 TFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMS 120 (317)
T ss_dssp SGGGCSEEECSTTCEEESCEEEECCCGGGCCCCSEEECCTTE
T ss_pred ccceeEEEEECCCEEEEEeEEecccCCccCceEEEEEeCCcE
Confidence 999999999999999999999999999889999999999974
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=99.97 E-value=1.9e-32 Score=266.53 Aligned_cols=120 Identities=52% Similarity=0.786 Sum_probs=115.4
Q ss_pred eeeEEEEccCCCCCcccHHHHHhhCCCCCCCCCceEEEEEecceeeeEEeeCCCCCceEEEecCCCceEEEccccccCCC
Q 045655 255 VTDIVTVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVVDGW 334 (377)
Q Consensus 255 ~~~~~~V~~dg~g~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~ 334 (377)
++++++|++||+|+|+|||+||+++|++ +++|++|+|+||+|+|+|+|++.|+||+|+|+|+++|+|+|+++..+|+
T Consensus 5 ~~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~ 81 (319)
T 1gq8_A 5 VGPNVVVAADGSGDYKTVSEAVAAAPED---SKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGS 81 (319)
T ss_dssp SCCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTC
T ss_pred ccceEEECCCCCCCccCHHHHHHhcccc---CCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCCC
Confidence 5679999999999999999999999998 6889999999999999999999999999999999999999999988999
Q ss_pred CCCcceeEEEEcCCEEEEcceEEeCCCCCCCceEEEEecCCCC
Q 045655 335 TTFNSATFIVVAPNFVASSITFRNTAGPSKGQAVALRSGADFS 377 (377)
Q Consensus 335 ~t~~sat~~v~~~~f~~~~it~~Ntag~~~~QAvAl~v~~D~~ 377 (377)
+|+.|+||.|.+++|+++||||+|++|+.++|||||+++||++
T Consensus 82 ~t~~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~ 124 (319)
T 1gq8_A 82 TTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLS 124 (319)
T ss_dssp CTGGGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTE
T ss_pred CccceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEecCCcE
Confidence 9999999999999999999999999999889999999999974
No 3
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=99.97 E-value=7.3e-31 Score=228.87 Aligned_cols=145 Identities=17% Similarity=0.240 Sum_probs=131.2
Q ss_pred CCchhcccCCCCCccchhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHH
Q 045655 35 PVPPETICMCTPNPSDCKSVLPAASPNQTADTYTYCRLSIRKALTQTQKFLNSVDNYLKSGSTLSISAIRALEDCRLLAD 114 (377)
Q Consensus 35 ~~~v~~~C~~T~yp~~C~ssL~~~~~s~~~dp~~l~~iai~~a~~~a~~a~~~i~~l~~~~~~~d~~~k~aL~DC~el~~ 114 (377)
...|+.+|++|+||++|+++| .|.+...+|++|+++++++++.++..+...+..+.+.. .+++.+.||+||.|+|+
T Consensus 5 ~~~i~~~C~~T~~~~~C~~sL--~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~ 80 (153)
T 1x91_A 5 SSEMSTICDKTLNPSFCLKFL--NTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGG--VDPRSKLAYRSCVDEYE 80 (153)
T ss_dssp CCSTTTGGGGSSCHHHHHHHH--HHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCChhHHHHHh--CcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHH
Confidence 679999999999999999999 44455679999999999999999999999999887654 48999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCccchhhHHHHHHHHHhhhhhhHhhhccCCCcccccccccccchhhHHHHHHHHhhhhcc
Q 045655 115 LNMDYLSTSYQTANTTSQILPTIQADDVQALLSAILTNQQTCFDGLQTSANSFESINNGLSVPLLEDIKLSSVLLALFKK 194 (377)
Q Consensus 115 ~Aid~L~~S~~~l~~~~~~~~~~~~~Dl~TWLSAAlT~q~TC~DGF~e~~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~ 194 (377)
+++++|++++.+|+. ..++|++||||+||||++||+|||.+.+ .++++|...+.++.+|+||+|+|++.
T Consensus 81 ~a~~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~~----~~~~~l~~~~~~~~~l~s~aLai~~~ 149 (153)
T 1x91_A 81 SAIGNLEEAFEHLAS-------GDGMGMNMKVSAALDGADTCLDDVKRLR----SVDSSVVNNSKTIKNLCGIALVISNM 149 (153)
T ss_dssp HHHHHHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHHHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHccHhHHHHHhccCC----CCcCHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999984 3599999999999999999999998763 25678899999999999999999985
No 4
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=99.97 E-value=5.7e-31 Score=229.20 Aligned_cols=147 Identities=19% Similarity=0.183 Sum_probs=133.3
Q ss_pred CCchhcccCCCCCccchhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHH
Q 045655 35 PVPPETICMCTPNPSDCKSVLPAASPNQTADTYTYCRLSIRKALTQTQKFLNSVDNYLKSGSTLSISAIRALEDCRLLAD 114 (377)
Q Consensus 35 ~~~v~~~C~~T~yp~~C~ssL~~~~~s~~~dp~~l~~iai~~a~~~a~~a~~~i~~l~~~~~~~d~~~k~aL~DC~el~~ 114 (377)
.+.|+.+|+.|+||++|+++|.+.|.+...||++|+++++++++.++..+...+..+.+.. .+++.+.||+||.|+|+
T Consensus 3 ~~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~ 80 (153)
T 1xg2_B 3 NHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA--TDPKLKGRYETCSENYA 80 (153)
T ss_dssp CHHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHH
Confidence 4679999999999999999999988766689999999999999999999999999886543 48999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCccchhhHHHHHHHHHhhhhhhHhhhccCCCcccccccccccchhhHHHHHHHHhhhhcc
Q 045655 115 LNMDYLSTSYQTANTTSQILPTIQADDVQALLSAILTNQQTCFDGLQTSANSFESINNGLSVPLLEDIKLSSVLLALFKK 194 (377)
Q Consensus 115 ~Aid~L~~S~~~l~~~~~~~~~~~~~Dl~TWLSAAlT~q~TC~DGF~e~~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~~ 194 (377)
+++++|.+++.+|+. ..++|++|||||||||++||+|||.+.+. ++++|...+.++.+|+||+|+|++.
T Consensus 81 ~a~~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~~~----~~~~l~~~~~~~~~l~s~aLai~~~ 149 (153)
T 1xg2_B 81 DAIDSLGQAKQFLTS-------GDYNSLNIYASAAFDGAGTCEDSFEGPPN----IPTQLHQADLKLEDLCDIVLVISNL 149 (153)
T ss_dssp HHHHHHHHHHHHHHH-------TCHHHHHHHHHHHHHHHHHHHHHCCSSSC----CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-------CCHHHHHHHHHHHhcccchHHHHhccCCC----CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985 35899999999999999999999987642 4678889999999999999999985
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=99.97 E-value=3.4e-31 Score=263.32 Aligned_cols=121 Identities=25% Similarity=0.271 Sum_probs=105.0
Q ss_pred eeeEEEEccCCCC--CcccHHHHHhhCCCCCCCCCceEEEEEecceeeeEEeeCCCCCceEEEecCCCceEEEcccc---
Q 045655 255 VTDIVTVAQDGSG--NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRS--- 329 (377)
Q Consensus 255 ~~~~~~V~~dg~g--~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v~i~~~k~~i~l~G~g~~~tiI~~~~~--- 329 (377)
++++++|++||+| +|+|||+||+++|... +..|++|||+||+|+|+|+||+.|+||+|+|+|.++|+|++..+
T Consensus 73 ~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~--~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~ 150 (422)
T 3grh_A 73 AQPDFVVGPAGTQGVTHTTIQAAVDAAIIKR--TNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDG 150 (422)
T ss_dssp SSCSEEECSTTCTTCCBSSHHHHHHHHHTTC--CSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCCT
T ss_pred CCccEEEeCCCCCCcCcCCHHHHHHhchhcC--CCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeecccc
Confidence 4578999999998 9999999999997532 67899999999999999999999999999999998877664321
Q ss_pred ----------------cc-----------------CCCCCCcceeEEEEcCCEEEEcceEEeCCCC----CCCceEEEEe
Q 045655 330 ----------------VV-----------------DGWTTFNSATFIVVAPNFVASSITFRNTAGP----SKGQAVALRS 372 (377)
Q Consensus 330 ----------------~~-----------------~g~~t~~sat~~v~~~~f~~~~it~~Ntag~----~~~QAvAl~v 372 (377)
.. ...+|+.||||.|.|++|+++||||+|++|+ .++||||||+
T Consensus 151 ~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v 230 (422)
T 3grh_A 151 GMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT 230 (422)
T ss_dssp TSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE
T ss_pred cccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe
Confidence 01 1347889999999999999999999999997 4799999999
Q ss_pred cCCCC
Q 045655 373 GADFS 377 (377)
Q Consensus 373 ~~D~~ 377 (377)
+||++
T Consensus 231 ~gDr~ 235 (422)
T 3grh_A 231 DGDQV 235 (422)
T ss_dssp CCSSE
T ss_pred cCCcE
Confidence 99984
No 6
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=99.96 E-value=8.3e-30 Score=221.62 Aligned_cols=145 Identities=16% Similarity=0.143 Sum_probs=130.6
Q ss_pred CCchhcccCCCCCccchhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHH
Q 045655 35 PVPPETICMCTPNPSDCKSVLPAASPNQTADTYTYCRLSIRKALTQTQKFLNSVDNYLKSGSTLSISAIRALEDCRLLAD 114 (377)
Q Consensus 35 ~~~v~~~C~~T~yp~~C~ssL~~~~~s~~~dp~~l~~iai~~a~~~a~~a~~~i~~l~~~~~~~d~~~k~aL~DC~el~~ 114 (377)
...|+.+|++|+||++|+++|.+.|.+..+|+++|+++++++++.++..+...+..+.+.. .+++.+.+|+||.|+|+
T Consensus 4 ~~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~--~~~~~~~al~dC~e~y~ 81 (150)
T 2cj4_A 4 NNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN--PPAAWKGPLKNCAFSYK 81 (150)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHH
Confidence 5689999999999999999999888776779999999999999999999999999886543 47899999999999999
Q ss_pred HHH-HHHHHHHHHhhcCCCCCCccchhhHHHHHHHHHhhhhhhHhhhccCCCcccccccccccchhhHHHHHHHHhhhhc
Q 045655 115 LNM-DYLSTSYQTANTTSQILPTIQADDVQALLSAILTNQQTCFDGLQTSANSFESINNGLSVPLLEDIKLSSVLLALFK 193 (377)
Q Consensus 115 ~Ai-d~L~~S~~~l~~~~~~~~~~~~~Dl~TWLSAAlT~q~TC~DGF~e~~~~~~~~~~~l~~~l~~~~~L~SNaLAiv~ 193 (377)
+++ ++|.+++.+++. ..++|+++|||+|+||++||+|||.+. +++|...+.++.+|++|+|||++
T Consensus 82 ~a~~~~L~~a~~~l~~-------~~~~~~~t~lsaAlt~~~tC~dgf~~~-------~~pl~~~~~~~~~l~s~aLaii~ 147 (150)
T 2cj4_A 82 VILTASLPEAIEALTK-------GDPKFAEDGMVGSSGDAQECEEYFKGS-------KSPFSALNIAVHELSDVGRAIVR 147 (150)
T ss_dssp HHHHTHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHHHHTTTTS-------CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHhhCCC-------CCccHHHHHHHHHHHHHHHHHHH
Confidence 999 799999999984 368999999999999999999999732 35688889999999999999998
Q ss_pred cc
Q 045655 194 KG 195 (377)
Q Consensus 194 ~~ 195 (377)
.+
T Consensus 148 ~l 149 (150)
T 2cj4_A 148 NL 149 (150)
T ss_dssp TT
T ss_pred hh
Confidence 53
No 7
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=99.95 E-value=9.6e-29 Score=242.63 Aligned_cols=116 Identities=35% Similarity=0.479 Sum_probs=104.2
Q ss_pred eeEEEEc--cCCCCCcccHHHHHhhCCCCCCCCCceEEEEEecceeeeEEeeCCCCCceEEEecCCCceEEEcccccc--
Q 045655 256 TDIVTVA--QDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVV-- 331 (377)
Q Consensus 256 ~~~~~V~--~dg~g~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~-- 331 (377)
..+++|+ +||+|+|+|||+||+++|++ + +|++|+|+||+|+|+|+|+| ++|+|+|+|+++|+|+|++...
T Consensus 3 ~~~~vV~~~~~g~g~f~TIq~Ai~aap~~---~-~~~~I~I~~G~Y~E~V~I~k--~~Itl~G~g~~~tiI~~~~~~~~~ 76 (342)
T 2nsp_A 3 TYNAVVSKSSSDGKTFKTIADAIASAPAG---S-TPFVILIKNGVYNERLTITR--NNLHLKGESRNGAVIAAATAAGTL 76 (342)
T ss_dssp CCSEEECSCSSSCSCBSSHHHHHHTSCSS---S-SCEEEEECSEEEECCEEECS--TTEEEEESCTTTEEEEECCCTTCB
T ss_pred ccEEEEccCCCCCCCcchHHHHHHhcccC---C-CcEEEEEeCCEEEEEEEEec--CeEEEEecCCCCeEEEeccccccc
Confidence 4689999 99999999999999999987 5 89999999999999999964 7999999999999999997532
Q ss_pred ----CCCCCCcceeEEEEcCCEEEEcceEEeCC-----------CC---CCCceEEE--EecCCCC
Q 045655 332 ----DGWTTFNSATFIVVAPNFVASSITFRNTA-----------GP---SKGQAVAL--RSGADFS 377 (377)
Q Consensus 332 ----~g~~t~~sat~~v~~~~f~~~~it~~Nta-----------g~---~~~QAvAl--~v~~D~~ 377 (377)
++++|+.|+||.|.+++|+++||||+|++ |+ .++||||| +++||++
T Consensus 77 ~~~g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~ 142 (342)
T 2nsp_A 77 KSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRA 142 (342)
T ss_dssp CTTSCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSE
T ss_pred ccccCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcE
Confidence 34788999999999999999999999999 22 36999999 9999974
No 8
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=99.95 E-value=1.8e-28 Score=242.06 Aligned_cols=117 Identities=32% Similarity=0.511 Sum_probs=92.2
Q ss_pred eeeEEEEccC-CCCCcccHHHHHhhCCCCCCCCCceEEEEEecceeeeEEeeCCCCCceEEEecCCCceEEEcccccc--
Q 045655 255 VTDIVTVAQD-GSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDGINQTIITGNRSVV-- 331 (377)
Q Consensus 255 ~~~~~~V~~d-g~g~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~-- 331 (377)
...+++|++| |+|+|+|||+||+++|++ + +|++|+|+||+|+|+|+|+ |++|+|+|+|+++|+|+|++++.
T Consensus 29 ~~~~~~V~~~~g~g~f~TIq~Ai~aa~~~---~-~~~~I~I~~G~Y~E~v~I~--k~~itl~G~g~~~TiIt~~~~~~~~ 102 (364)
T 3uw0_A 29 AQYNAVVSTTPQGDEFSSINAALKSAPKD---D-TPFIIFLKNGVYTERLEVA--RSHVTLKGENRDGTVIGANTAAGML 102 (364)
T ss_dssp ---------------CCCHHHHHHHSCSS---S-SCEEEEECSEEECCCEEEC--STTEEEEESCTTTEEEEECCCTTSB
T ss_pred cCceEEEcCCCCCCCcccHHHHHhhcccC---C-CcEEEEEeCCEEEEEEEEc--CCeEEEEecCCCCeEEEcccccccc
Confidence 3468999999 999999999999999987 3 6899999999999999997 46999999999999999997642
Q ss_pred ----CCCCCCcceeEEEEcCCEEEEcceEEeCCC-----------C---CCCceEEEEe--cCCCC
Q 045655 332 ----DGWTTFNSATFIVVAPNFVASSITFRNTAG-----------P---SKGQAVALRS--GADFS 377 (377)
Q Consensus 332 ----~g~~t~~sat~~v~~~~f~~~~it~~Ntag-----------~---~~~QAvAl~v--~~D~~ 377 (377)
.+++|+.|+||.|.+++|+++||||+|+++ | .++||||||+ +||++
T Consensus 103 ~~~g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~ 168 (364)
T 3uw0_A 103 NPQGEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKA 168 (364)
T ss_dssp CTTCSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEE
T ss_pred ccccccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeE
Confidence 347899999999999999999999999995 2 3599999999 48864
No 9
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.04 E-value=1.2e-09 Score=109.16 Aligned_cols=105 Identities=14% Similarity=0.172 Sum_probs=80.2
Q ss_pred eeeEEEEccCCC----C-----CcccHHHHHhhCCCCCCCCCceEEEEEecceee--------eEEeeCCC---CCceEE
Q 045655 255 VTDIVTVAQDGS----G-----NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--------EYVSIPKN---KINLLM 314 (377)
Q Consensus 255 ~~~~~~V~~dg~----g-----~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~--------E~v~i~~~---k~~i~l 314 (377)
...++.|+++|+ | .| |||+|++.++++ .+|+|++|+|+ |.|.+.++ ..+|+|
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pG-------dtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti 84 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPG-------ELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYV 84 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTT-------CEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEE
T ss_pred CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCC-------CEEEECCCeEccccccccceeEEecCCCCCCCCEEE
Confidence 356889999764 4 69 999999999987 79999999999 78888654 246999
Q ss_pred EecCCCceEEEccccccCCCCCCcceeEEEEcCCEEEEcceEEeCCCCCCCceEEEEecCC
Q 045655 315 IGDGINQTIITGNRSVVDGWTTFNSATFIVVAPNFVASSITFRNTAGPSKGQAVALRSGAD 375 (377)
Q Consensus 315 ~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~it~~Ntag~~~~QAvAl~v~~D 375 (377)
.|++.++++|. ... ..+...+.+..|.|.++++++++|+|+|+..+ ++++.++
T Consensus 85 ~~~~g~~~vI~-~~~-~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~~------GI~v~gs 137 (400)
T 1ru4_A 85 AAANCGRAVFD-FSF-PDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQ------GAYVIGS 137 (400)
T ss_dssp EEGGGCCEEEE-CCC-CTTCCCTTCCSEEECSSCEEEESEEEESCSSC------SEEECSS
T ss_pred EEecCCCCEEe-CCc-cCCccccceeEEEEECCeEEEEeEEEEeCCCC------cEEEeCC
Confidence 99998899998 331 11211122467899999999999999998653 4566554
No 10
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.57 E-value=1.1e-07 Score=97.58 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=67.1
Q ss_pred EEEEccCCCCCcccHHHHHhhCCCCCCCCCceEEEEEecceeee-EEeeCCC---CCceEEEecCCCceEEEccccccCC
Q 045655 258 IVTVAQDGSGNFSTITDAINFAPNNTNVSNGYFLIYITAGVYQE-YVSIPKN---KINLLMIGDGINQTIITGNRSVVDG 333 (377)
Q Consensus 258 ~~~V~~dg~g~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E-~v~i~~~---k~~i~l~G~g~~~tiI~~~~~~~~g 333 (377)
++.|+ ++.+||+||++|+++ .+|+|++|+|+| .|.|.++ ..+|+|.|++.++++|.|.
T Consensus 25 ~i~V~-----~~~~Lq~Ai~~A~pG-------DtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------ 86 (506)
T 1dbg_A 25 GQVVA-----SNETLYQVVKEVKPG-------GLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------ 86 (506)
T ss_dssp -CEEC-----SHHHHHHHHHHCCTT-------CEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------
T ss_pred EEEeC-----CHHHHHHHHHhCCCC-------CEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------
Confidence 35676 478999999999998 899999999998 8888422 3589999998788999874
Q ss_pred CCCCcceeEEEEcCCEEEEcceEEeCCC
Q 045655 334 WTTFNSATFIVVAPNFVASSITFRNTAG 361 (377)
Q Consensus 334 ~~t~~sat~~v~~~~f~~~~it~~Ntag 361 (377)
.+|.|.|+++++++|+|+|..+
T Consensus 87 ------~~l~i~g~~v~i~GL~i~~~~~ 108 (506)
T 1dbg_A 87 ------AKVELRGEHLILEGIWFKDGNR 108 (506)
T ss_dssp ------CEEEECSSSEEEESCEEEEECC
T ss_pred ------ceEEEEcCCEEEECeEEECCCc
Confidence 3788899999999999999865
No 11
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.48 E-value=9.8e-05 Score=73.10 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=49.5
Q ss_pred EEEEEecceee--eEEeeCCCCCceEEEecCCCceE---EEccccccC-----CC--------CCCcceeEEEEc-----
Q 045655 290 FLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTI---ITGNRSVVD-----GW--------TTFNSATFIVVA----- 346 (377)
Q Consensus 290 ~~I~I~~G~Y~--E~v~i~~~k~~i~l~G~g~~~ti---I~~~~~~~~-----g~--------~t~~sat~~v~~----- 346 (377)
.+|+|.||+|+ ++|+|+ |++|+|.|++. .++ |.++-.... +. .-..-+.|.|.+
T Consensus 58 dvI~L~~G~Y~l~g~ivId--kp~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r 134 (410)
T 2inu_A 58 AAIIIPPGDYDLHTQVVVD--VSYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPR 134 (410)
T ss_dssp EEEECCSEEEEECSCEEEC--CTTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSC
T ss_pred CEEEECCCeeccCCcEEEe--cCcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcc
Confidence 89999999997 899995 57799999874 333 664421100 00 011346666776
Q ss_pred -CCEEEEcceEEeC-----CCCCCCceEEEEec
Q 045655 347 -PNFVASSITFRNT-----AGPSKGQAVALRSG 373 (377)
Q Consensus 347 -~~f~~~~it~~Nt-----ag~~~~QAvAl~v~ 373 (377)
+++++++++|++. -..-..|=-++++.
T Consensus 135 ~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~ 167 (410)
T 2inu_A 135 LSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVA 167 (410)
T ss_dssp EECCEEESCEEECCCCSSSTTSCCCSCEEEEEC
T ss_pred cCCcEECCEEEECCEeecCCCCcccCceeEEEe
Confidence 5666666666665 32223444555554
No 12
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=96.56 E-value=0.0039 Score=60.73 Aligned_cols=52 Identities=25% Similarity=0.368 Sum_probs=41.6
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEecceeee---------EEeeCCCCCceEEEecCCCceEEEcc
Q 045655 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQE---------YVSIPKNKINLLMIGDGINQTIITGN 327 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E---------~v~i~~~k~~i~l~G~g~~~tiI~~~ 327 (377)
+-..||+||+++... +..+|+|.||+|.. .+.++ .+++|+|+|+++|+|...
T Consensus 18 dt~aiq~Ai~~a~~~-----gg~~v~~p~G~y~~~~~~~~~~g~l~~~---~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA-----GGGTVYLPAGEYRVSAAGEPGDGCLMLK---DGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CHHHHHHHHHHHHHT-----TSEEEEECSEEEEECCCSSGGGCSEECC---TTEEEEESSBTTEEEEEC
T ss_pred hHHHHHHHHHHHHhc-----CCCEEEECCeEEEEcccccCCcccEEec---CCeEEEEcCCCCcEEEec
Confidence 457899999998753 12799999999996 57774 599999999888887654
No 13
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=93.47 E-value=0.12 Score=50.32 Aligned_cols=69 Identities=7% Similarity=0.108 Sum_probs=50.7
Q ss_pred ccHHHHHhhCCCCCCCCCceEEEEEecceee--eEEeeCCCCCceEEEecCCCceEEEccccccCCCCCCcceeEEE-Ec
Q 045655 270 STITDAINFAPNNTNVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIV-VA 346 (377)
Q Consensus 270 ~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~--E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~ 346 (377)
-|+++||.+..+ +.+|+...|+|+ +.|.|. .++||.|.|. ..+|.|.. ..+.+ .+
T Consensus 56 GsLr~av~~~~P-------~~Ivf~~~g~I~l~~~l~V~---sn~TI~G~ga-~~~i~G~G-----------~gi~i~~a 113 (346)
T 1pxz_A 56 GTLRYGATREKA-------LWIIFSQNMNIKLKMPLYVA---GHKTIDGRGA-DVHLGNGG-----------PCLFMRKV 113 (346)
T ss_dssp TSHHHHHHCSSC-------EEEEESSCEEECCSSCEECC---SSEEEECTTS-CEEEETTS-----------CCEEEESC
T ss_pred chhHHHhccCCC-------eEEEEcCCcEEecCccEEec---CCeEEEccCC-ceEEeCCc-----------ceEEEEcc
Confidence 389999997433 477777889997 678884 4999999974 56677632 12223 47
Q ss_pred CCEEEEcceEEeCC
Q 045655 347 PNFVASSITFRNTA 360 (377)
Q Consensus 347 ~~f~~~~it~~Nta 360 (377)
++++++||+|+|..
T Consensus 114 ~NVIIrnl~i~~~~ 127 (346)
T 1pxz_A 114 SHVILHSLHIHGCN 127 (346)
T ss_dssp EEEEEESCEEECCC
T ss_pred CCEEEEeeEEEeec
Confidence 89999999999864
No 14
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=93.09 E-value=0.42 Score=50.72 Aligned_cols=58 Identities=21% Similarity=0.298 Sum_probs=42.9
Q ss_pred cccHHHHHhhCCCCCC----CCCceEEEEEecceee--eEEeeCCCCCceEEEecCCCceEEEcccc
Q 045655 269 FSTITDAINFAPNNTN----VSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGNRS 329 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~----~~~~~~~I~I~~G~Y~--E~v~i~~~k~~i~l~G~g~~~tiI~~~~~ 329 (377)
=.-||+||+++...+. ....+.+|||.+|+|. ..|.++ .++.|+|++.+.++|....+
T Consensus 66 T~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~---~~t~L~G~~~~~pvIka~~~ 129 (758)
T 3eqn_A 66 TAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL---YQTQLIGDAKNLPTLLAAPN 129 (758)
T ss_dssp HHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECC---TTEEEEECSSSCCEEEECTT
T ss_pred HHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEcc---CCeEEEecCCCCCeEecCCC
Confidence 3569999999865310 0134579999999997 468775 58999999988788866544
No 15
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=90.16 E-value=1.2 Score=43.27 Aligned_cols=52 Identities=21% Similarity=0.221 Sum_probs=32.5
Q ss_pred EEEEccCCCC-CcccHHHHHhhCCCCCCCCCceEEEEEec--ceee-eEEeeCCCCCceEEEecC
Q 045655 258 IVTVAQDGSG-NFSTITDAINFAPNNTNVSNGYFLIYITA--GVYQ-EYVSIPKNKINLLMIGDG 318 (377)
Q Consensus 258 ~~~V~~dg~g-~f~TIq~Av~a~p~~~~~~~~~~~I~I~~--G~Y~-E~v~i~~~k~~i~l~G~g 318 (377)
...|-..|.. +=..||+||++++.++ .++++.| |+|. ..|.++ .+++|..++
T Consensus 14 ~~~v~~~G~~~dT~aiq~Ai~ac~~Gg------~v~~~~~~~g~yl~g~i~l~---s~vtL~l~~ 69 (376)
T 1bhe_A 14 SCTTLKADSSTATSTIQKALNNCDQGK------AVRLSAGSTSVFLSGPLSLP---SGVSLLIDK 69 (376)
T ss_dssp EEEEEECCSSBCHHHHHHHHTTCCTTC------EEEEECSSSSEEEESCEECC---TTCEEEECT
T ss_pred eEEECCCCCCccHHHHHHHHHHhccCC------cEEEECCCCceEEEeEEEEC---CCCEEEECC
Confidence 3555555532 3345999999987651 3444443 8996 577774 467776654
No 16
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=89.48 E-value=0.47 Score=46.30 Aligned_cols=41 Identities=22% Similarity=0.382 Sum_probs=29.4
Q ss_pred EEeeCCCCCceEEEecCCCceEEEccccccCCCCCCcceeEEE--EcCCEEEEcceEEeC
Q 045655 302 YVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIV--VAPNFVASSITFRNT 359 (377)
Q Consensus 302 ~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v--~~~~f~~~~it~~Nt 359 (377)
.|.|+ .|+||+|.|. ...|.|. -|.| .+++++++||+|++.
T Consensus 103 ~l~v~---snkTI~G~G~-~~~i~G~-------------gl~i~~~a~NVIIrnL~i~~~ 145 (359)
T 1idk_A 103 GITVT---SNKSLIGEGS-SGAIKGK-------------GLRIVSGAENIIIQNIAVTDI 145 (359)
T ss_dssp CEEEC---SSEEEEECTT-TCEEESC-------------CEEECTTCEEEEEESCEEEEE
T ss_pred eEEeC---CCceEEEecC-CeEEecc-------------eEEEecCCCcEEEeCeEEEcc
Confidence 36663 5899999874 3455542 2666 478999999999984
No 17
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=88.50 E-value=0.93 Score=44.14 Aligned_cols=37 Identities=24% Similarity=0.410 Sum_probs=25.3
Q ss_pred CceEEEecCCCceEEEccccccCCCCCCcceeEEE--EcCCEEEEcceEEeCC
Q 045655 310 INLLMIGDGINQTIITGNRSVVDGWTTFNSATFIV--VAPNFVASSITFRNTA 360 (377)
Q Consensus 310 ~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v--~~~~f~~~~it~~Nta 360 (377)
.|+||+|.|. ..+|.|. .|.| .+++++++||+|++.-
T Consensus 108 snkTI~G~g~-~~~I~G~-------------gl~i~~~a~NVIIrnl~i~~~~ 146 (359)
T 1qcx_A 108 SNKSIVGQGT-KGVIKGK-------------GLRVVSGAKNVIIQNIAVTDIN 146 (359)
T ss_dssp SSEEEEECTT-CCEEESC-------------CEEEETTCCCEEEESCEEEEEC
T ss_pred CCceEEecCC-ceEEecc-------------eEEEecCCCCEEEeCcEEEecC
Confidence 3677777664 3344432 3677 5799999999999863
No 18
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=87.97 E-value=0.0041 Score=62.41 Aligned_cols=92 Identities=16% Similarity=0.007 Sum_probs=72.2
Q ss_pred EEccCCCCCcccHHHHHhhCCCCCCCCCceE------EEEEecceeeeEEeeCCCCCceEEEecCC---CceEEEccccc
Q 045655 260 TVAQDGSGNFSTITDAINFAPNNTNVSNGYF------LIYITAGVYQEYVSIPKNKINLLMIGDGI---NQTIITGNRSV 330 (377)
Q Consensus 260 ~V~~dg~g~f~TIq~Av~a~p~~~~~~~~~~------~I~I~~G~Y~E~v~i~~~k~~i~l~G~g~---~~tiI~~~~~~ 330 (377)
.|+.+..|.+ +|+|.+.++-. .+.+. .+-|++|+|+|.|.|+.+++++++.|-+. +.|.|+++...
T Consensus 295 ~~~~~~~g~~--~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (432)
T 1vcl_A 295 MVGCDQNGKV--SQQISNTISFS---STVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCDN 369 (432)
T ss_dssp EEEEETTSCC--EEEECCEEECS---SCCCHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEECCB
T ss_pred ccccCCCCcE--EEeccceEEEe---ccccccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEecCC
Confidence 4555556666 58888887765 23334 67899999999999999999999998764 34999998643
Q ss_pred cCCCCCCcceeEEEEcCCEEEEcceEEeCCCC
Q 045655 331 VDGWTTFNSATFIVVAPNFVASSITFRNTAGP 362 (377)
Q Consensus 331 ~~g~~t~~sat~~v~~~~f~~~~it~~Ntag~ 362 (377)
|.|+++.+.|-.|++++-|-|-.++.
T Consensus 370 ------~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (432)
T 1vcl_A 370 ------YDSDEEFTRGCMWQLAIETTEVKSGD 395 (432)
T ss_dssp ------CTTSSBCSSEEEEEEEEEEEETTTTE
T ss_pred ------CcccChhhccceEEEeeeeeecccCc
Confidence 56788999999999999998877663
No 19
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=87.87 E-value=0.63 Score=45.07 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=21.7
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEecceeee
Q 045655 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQE 301 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E 301 (377)
++..||+|++++... +.-+|+|.+|+|..
T Consensus 7 ~t~aiq~ai~~c~~~-----gg~~v~vP~G~~l~ 35 (349)
T 1hg8_A 7 EYSGLATAVSSCKNI-----VLNGFQVPTGKQLD 35 (349)
T ss_dssp SGGGHHHHHHHCSEE-----EECCCEECTTCCEE
T ss_pred CHHHHHHHHHhcccc-----CCCEEEECCCEEEE
Confidence 466799999998752 12578899999864
No 20
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=87.71 E-value=0.4 Score=46.22 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=48.1
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeeeEE-eeCCCCCceEEEecCC-----------------CceEEEccc-c
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGNR-S 329 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v-~i~~~k~~i~l~G~g~-----------------~~tiI~~~~-~ 329 (377)
+..||+|++++... ..-+|+|.+|+|.. + .+ +.+++|+++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----~g~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~gG 78 (339)
T 2iq7_A 8 AAAAIKGKASCTSI-----ILNGIVVPAGTTLD-MTGL---KSGTTVTFQGKTTFGYKEWEGPLISFSGTNININGASGH 78 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcccEEEEcCCCC
Confidence 55799999998752 22678899999974 3 22 23555554430 234444431 1
Q ss_pred ccCC-----CC-------CCcceeEEE-EcCCEEEEcceEEeCCC
Q 045655 330 VVDG-----WT-------TFNSATFIV-VAPNFVASSITFRNTAG 361 (377)
Q Consensus 330 ~~~g-----~~-------t~~sat~~v-~~~~f~~~~it~~Ntag 361 (377)
..+| |. ..+-..+.+ ..+++.+++|+|+|+..
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~ 123 (339)
T 2iq7_A 79 SIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV 123 (339)
T ss_dssp EEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS
T ss_pred EEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc
Confidence 1121 11 112223444 47889999999999853
No 21
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=85.52 E-value=1.7 Score=43.84 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=28.5
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEecceee-eEEeeCCCCCceEEEec
Q 045655 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ-EYVSIPKNKINLLMIGD 317 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~-E~v~i~~~k~~i~l~G~ 317 (377)
+=.-||+|++++... .+.-+|+|.+|+|. ..|.+ +.+++|..+
T Consensus 38 dT~Aiq~Aidac~~~----~ggg~V~vP~GtYl~g~I~l---ks~v~L~l~ 81 (464)
T 1h80_A 38 DSNALQRAINAISRK----PNGGTLLIPNGTYHFLGIQM---KSNVHIRVE 81 (464)
T ss_dssp CHHHHHHHHHHHHTS----TTCEEEEECSSEEEECSEEC---CTTEEEEEC
T ss_pred hHHHHHHHHHHHhhc----cCCcEEEECCCeEEEeeEec---cCceEEEEc
Confidence 355699999987331 02378999999995 34555 246666655
No 22
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=84.90 E-value=0.65 Score=44.64 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=46.6
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeeeEE-eeCCCCCceEEEecCC-----------------CceEEEccc-c
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGNR-S 329 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v-~i~~~k~~i~l~G~g~-----------------~~tiI~~~~-~ 329 (377)
+..||+|++++... +.-+|+|.+|+|.. + .+ +.+++|+++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----gg~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 78 (336)
T 1nhc_A 8 ASEASESISSCSDV-----VLSSIEVPAGETLD-LSDA---ADGSTITFEGTTSFGYKEWKGPLIRFGGKDLTVTMADGA 78 (336)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-CTTC---CTTCEEEEESEEEECCCCSCCCSEECCEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeceEEcccccccCcEEEEecCCEEEEcCCCe
Confidence 45699999988652 22578888998863 3 22 23566665440 234445531 1
Q ss_pred ccCC-----CC-------CCcceeEEE-EcCCEEEEcceEEeCC
Q 045655 330 VVDG-----WT-------TFNSATFIV-VAPNFVASSITFRNTA 360 (377)
Q Consensus 330 ~~~g-----~~-------t~~sat~~v-~~~~f~~~~it~~Nta 360 (377)
..+| |. ..+-..+.+ ..+++.++||+|+|+.
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp 122 (336)
T 1nhc_A 79 VIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP 122 (336)
T ss_dssp EEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS
T ss_pred EEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC
Confidence 1121 11 111223444 4778899999999874
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=84.16 E-value=0.74 Score=44.33 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=48.5
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeeeEE-eeCCCCCceEEEecCC-----------------CceEEEccc-c
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDGI-----------------NQTIITGNR-S 329 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v-~i~~~k~~i~l~G~g~-----------------~~tiI~~~~-~ 329 (377)
+..||+|++++... ..-+|+|.+|+|.. + .+ +.+++|+++|. +.+.|+|.. .
T Consensus 12 ~~aiq~ai~~c~~~-----gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 82 (339)
T 1ia5_A 12 ASSASKSKTSCSTI-----VLSNVAVPSGTTLD-LTKL---NDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGASGH 82 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred hHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcCcEEEEcCCCe
Confidence 56799999998752 23678999999974 3 23 33566665541 223444431 1
Q ss_pred ccCC-----CC-------CCcceeEEE-EcCCEEEEcceEEeCCC
Q 045655 330 VVDG-----WT-------TFNSATFIV-VAPNFVASSITFRNTAG 361 (377)
Q Consensus 330 ~~~g-----~~-------t~~sat~~v-~~~~f~~~~it~~Ntag 361 (377)
..+| |. ..+-..+.+ ..+++.++||+|+|+..
T Consensus 83 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~ 127 (339)
T 1ia5_A 83 SINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV 127 (339)
T ss_dssp EEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS
T ss_pred EEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc
Confidence 1122 11 112223444 46788999999998743
No 24
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=83.99 E-value=2 Score=41.48 Aligned_cols=53 Identities=17% Similarity=0.302 Sum_probs=38.2
Q ss_pred eEEEEEecceee----eEEeeCCCCCceEEEecCCCceEEEccccccCCCCCCcceeEEE-EcCCEEEEcceEEeCC
Q 045655 289 YFLIYITAGVYQ----EYVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIV-VAPNFVASSITFRNTA 360 (377)
Q Consensus 289 ~~~I~I~~G~Y~----E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~it~~Nta 360 (377)
+.+|.| .|++. +.|.| .+|+||.|.|.. .|.|. -+.| .+++++++||.|++..
T Consensus 47 PriIvv-~G~I~~~~~~~l~v---~snkTI~G~ga~--~I~G~-------------Gi~I~~a~NVIIrnl~i~~~~ 104 (340)
T 3zsc_A 47 KYVIVV-DGTIVFEPKREIKV---LSDKTIVGINDA--KIVGG-------------GLVIKDAQNVIIRNIHFEGFY 104 (340)
T ss_dssp CEEEEE-EEEEEEEEEEEEEE---CSSEEEEEEEEE--EEEEE-------------EEEEESCEEEEEESCEEECCC
T ss_pred CEEEEE-CcEEEeCCcceEEe---cCCCEEEeccCc--EEecC-------------ceEEEcCceEEEeCeEEECCc
Confidence 356655 68876 56777 369999999865 66653 2334 4689999999999864
No 25
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=83.90 E-value=3.5 Score=40.01 Aligned_cols=42 Identities=19% Similarity=0.308 Sum_probs=29.5
Q ss_pred EEeeCCCCCceEEEecCCCceEEEccccccCCCCCCcceeEEE-EcCCEEEEcceEEeCC
Q 045655 302 YVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIV-VAPNFVASSITFRNTA 360 (377)
Q Consensus 302 ~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~it~~Nta 360 (377)
+|.| ..|+||+|.|. ...|.|. .|.+ ..++++++||+|++..
T Consensus 75 ~l~v---~sn~TI~G~G~-~~~i~g~-------------gl~i~~~~NVIIrnl~i~~~~ 117 (355)
T 1pcl_A 75 QISI---PSNTTIIGVGS-NGKFTNG-------------SLVIKGVKNVILRNLYIETPV 117 (355)
T ss_pred eEEe---CCCeEEEEecC-CeEEecC-------------EEEEecCCeEEEeeeEEEcCc
Confidence 5566 36999999874 4555542 2344 4689999999999753
No 26
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=83.08 E-value=2.6 Score=44.81 Aligned_cols=76 Identities=17% Similarity=0.261 Sum_probs=51.5
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEecceee--eEEeeCCCCCceEEEecCCCceEEEccc-cccCCCCCCcceeEEE
Q 045655 268 NFSTITDAINFAPNNTNVSNGYFLIYITAGVYQ--EYVSIPKNKINLLMIGDGINQTIITGNR-SVVDGWTTFNSATFIV 344 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~--E~v~i~~~k~~i~l~G~g~~~tiI~~~~-~~~~g~~t~~sat~~v 344 (377)
|=..||+|++++..+ .+||+.+|+|+ ..|.|| +++.|+|++- . +|.+.. .+.|.. .--+.|.|
T Consensus 416 DT~Ai~~al~aa~~g-------~~v~~P~G~Y~vt~Ti~ip---~~~~ivG~~~-~-~I~~~G~~F~d~~--~P~pvv~V 481 (758)
T 3eqn_A 416 DTQAIKNVFAKYAGC-------KIIFFDAGTYIVTDTIQIP---AGTQIVGEVW-S-VIMGTGSKFTDYN--NPQPVIQV 481 (758)
T ss_dssp CHHHHHHHHHHHTTT-------SEEECCSEEEEESSCEEEC---TTCEEECCSS-E-EEEECSGGGCCTT--SCEEEEEE
T ss_pred hHHHHHHHHHHhcCC-------CEEEECCCEeEECCeEEcC---CCCEEEeccc-c-eEecCCccccCCC--CCeeeEEe
Confidence 356799999977544 69999999998 679997 4899999985 3 444433 222211 11245555
Q ss_pred E----cCCEEEEcceEE
Q 045655 345 V----APNFVASSITFR 357 (377)
Q Consensus 345 ~----~~~f~~~~it~~ 357 (377)
. ..++.+.+|.|.
T Consensus 482 G~~gd~G~veisdl~~~ 498 (758)
T 3eqn_A 482 GAPGSSGVVEITDMIFT 498 (758)
T ss_dssp SCTTCBSCEEEESCEEE
T ss_pred CCCCCCCeEEEEeEEEE
Confidence 2 247888888886
No 27
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=82.49 E-value=1 Score=46.88 Aligned_cols=45 Identities=22% Similarity=0.434 Sum_probs=34.6
Q ss_pred ccHHHHHhhCCCCCCCCCceEEEEEecceeee--EEeeCCCCCceEEEecCCCceEEEcc
Q 045655 270 STITDAINFAPNNTNVSNGYFLIYITAGVYQE--YVSIPKNKINLLMIGDGINQTIITGN 327 (377)
Q Consensus 270 ~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E--~v~i~~~k~~i~l~G~g~~~tiI~~~ 327 (377)
.-||+|+++. -+|+|.+|+|.= .|.++ .+++|+|++...++|.+.
T Consensus 40 ~Aiq~Ai~~G----------g~V~iP~GtYlis~~l~l~---snv~L~g~g~~~t~L~~~ 86 (609)
T 3gq8_A 40 RAFEKAIESG----------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFM 86 (609)
T ss_dssp HHHHHHHHTS----------SCEEECSEEEEESSCEEEC---SSEEEEESCTTTEEEEEC
T ss_pred HHHHHHHHcC----------CEEEECCccEEEeCceEEC---CCcEEEEeeCCCCEEEeC
Confidence 4599999962 479999999984 57774 589999998766776644
No 28
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=81.79 E-value=4 Score=40.21 Aligned_cols=38 Identities=21% Similarity=0.485 Sum_probs=28.9
Q ss_pred CCceEEEecCCCceEEEccccccCCCCCCcceeEEEEcCCEEEEcceEEeCC
Q 045655 309 KINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIVVAPNFVASSITFRNTA 360 (377)
Q Consensus 309 k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~it~~Nta 360 (377)
.+|+||+|.|. ...|.| ..|.|.+++++++||+|++..
T Consensus 126 ~snkTI~G~G~-~~~i~g-------------~gl~i~~~NVIIrnl~i~~~~ 163 (399)
T 2o04_A 126 PANTTIVGSGT-NAKVVG-------------GNFQIKSDNVIIRNIEFQDAY 163 (399)
T ss_dssp CSSEEEEESSS-CCEEES-------------CEEEECSEEEEEESCEEECCC
T ss_pred CCCceEEeccC-CeEEee-------------CEEEeeCCCEEEeCeEEecCc
Confidence 46999999975 445554 346777799999999999863
No 29
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=81.74 E-value=3.7 Score=39.96 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=38.8
Q ss_pred CceEEEEEecceee----------------eEEeeCCCCCceEEEecCCCceEEEccccccCCCCCCcceeEEE----Ec
Q 045655 287 NGYFLIYITAGVYQ----------------EYVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIV----VA 346 (377)
Q Consensus 287 ~~~~~I~I~~G~Y~----------------E~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v----~~ 346 (377)
.++.+|+| .|+.. .+|.| ..|+||+|.|. ...|.| .-|.| ..
T Consensus 52 ~~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v---~snkTI~G~G~-~~~i~g-------------~gl~i~~~~~~ 113 (361)
T 1pe9_A 52 AEAKIIQI-KGTIDISGGTPYTDFADQKARSQINI---PANTTVIGLGT-DAKFIN-------------GSLIIDGTDGT 113 (361)
T ss_dssp TSCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEEC---CSSEEEEECTT-CCEEES-------------SEEEEEGGGTC
T ss_pred CCcEEEEE-CCEEecCCccccccccccccceeEEe---cCCcEEEccCC-CeEEec-------------CEEEEecCCCC
Confidence 44577766 56664 25666 36999999975 444554 23566 46
Q ss_pred CCEEEEcceEEeCC
Q 045655 347 PNFVASSITFRNTA 360 (377)
Q Consensus 347 ~~f~~~~it~~Nta 360 (377)
++++++||+|++..
T Consensus 114 ~NVIIrNl~i~~~~ 127 (361)
T 1pe9_A 114 NNVIIRNVYIQTPI 127 (361)
T ss_dssp EEEEEESCEEECCC
T ss_pred ceEEEeCeEEEcCc
Confidence 89999999999864
No 30
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=79.12 E-value=3.2 Score=40.23 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=43.1
Q ss_pred CcccHHHHHhhCCCCC-----CCCCceEEEEEeccee------------------eeEEeeCCCCCceEEEecCCCceEE
Q 045655 268 NFSTITDAINFAPNNT-----NVSNGYFLIYITAGVY------------------QEYVSIPKNKINLLMIGDGINQTII 324 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~-----~~~~~~~~I~I~~G~Y------------------~E~v~i~~~k~~i~l~G~g~~~tiI 324 (377)
...++++||+++..+. ....++.+|+| .|+- ...+.|.....|+||+|.+.. |
T Consensus 25 t~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~~---~ 100 (353)
T 1air_A 25 SMQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANGS---S 100 (353)
T ss_dssp SHHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTTC---C
T ss_pred CHHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccCC---C
Confidence 3668899998865210 01345677777 4542 245666433468888886311 1
Q ss_pred EccccccCCCCCCcceeEEE-EcCCEEEEcceEEeC
Q 045655 325 TGNRSVVDGWTTFNSATFIV-VAPNFVASSITFRNT 359 (377)
Q Consensus 325 ~~~~~~~~g~~t~~sat~~v-~~~~f~~~~it~~Nt 359 (377)
. | ..|.+ ..++++++||+|++-
T Consensus 101 ~-------g------~gl~i~~~~NVIIrnl~i~~~ 123 (353)
T 1air_A 101 A-------N------FGIWIKKSSDVVVQNMRIGYL 123 (353)
T ss_dssp B-------S------SEEEEESCCSEEEESCEEESC
T ss_pred C-------C------ceEEEeccCcEEEeccEEEeC
Confidence 1 1 12344 457888888888854
No 31
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=77.40 E-value=2.1 Score=41.62 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=27.2
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeeeEE-eeCCCCCceEEEecC
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYV-SIPKNKINLLMIGDG 318 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v-~i~~~k~~i~l~G~g 318 (377)
+..||+|++++... ..-+|+|.+|+|.. + .+ +.+++|+++|
T Consensus 35 ~~aiq~ai~~c~~~-----~g~~v~vP~G~~l~-l~~l---~~~~~l~~~g 76 (362)
T 1czf_A 35 AAAAKAGKAKCSTI-----TLNNIEVPAGTTLD-LTGL---TSGTKVIFEG 76 (362)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEES
T ss_pred HHHHHHHHHHhhcc-----CCCEEEECCCEEEE-eecc---CCCeEEEEeC
Confidence 56899999998642 23578999999974 3 22 2355555544
No 32
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=74.71 E-value=10 Score=36.23 Aligned_cols=71 Identities=20% Similarity=0.340 Sum_probs=44.5
Q ss_pred cHHHHHhh---CCCCCCCCCceEEEEEecceee------eEEeeCC------CCCceEEEecCCCceEEEccccccCCCC
Q 045655 271 TITDAINF---APNNTNVSNGYFLIYITAGVYQ------EYVSIPK------NKINLLMIGDGINQTIITGNRSVVDGWT 335 (377)
Q Consensus 271 TIq~Av~a---~p~~~~~~~~~~~I~I~~G~Y~------E~v~i~~------~k~~i~l~G~g~~~tiI~~~~~~~~g~~ 335 (377)
-+++||.. .... .++.+|+| .|+-+ ++|.|.. ..+|+||+|.|.+ ..|.|.
T Consensus 30 dL~~Al~~~~~~~~~----~~p~iI~V-~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~-~~i~G~-------- 95 (326)
T 3vmv_A 30 QIQQLIDNRSRSNNP----DEPLTIYV-NGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTN-GEFDGI-------- 95 (326)
T ss_dssp HHHHHHHHHHHSSCT----TSCEEEEE-CSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTC-CEEESC--------
T ss_pred HHHHHHhhcccccCC----CCCEEEEE-eeEEecCCCCCceEEEecccccccCCCCeEEEecCCC-eEEeCc--------
Confidence 37888873 1111 34466764 46554 5677741 1269999998853 444442
Q ss_pred CCcceeEEE-EcCCEEEEcceEEeCC
Q 045655 336 TFNSATFIV-VAPNFVASSITFRNTA 360 (377)
Q Consensus 336 t~~sat~~v-~~~~f~~~~it~~Nta 360 (377)
.+.| .+++++++||.|++..
T Consensus 96 -----gl~i~~a~NVIIrNl~i~~~~ 116 (326)
T 3vmv_A 96 -----GIRLSNAHNIIIQNVSIHHVR 116 (326)
T ss_dssp -----CEEEESEEEEEEESCEEECCC
T ss_pred -----EEEEEecceEEEECeEEEcCC
Confidence 2344 6789999999999875
No 33
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=73.74 E-value=5.7 Score=39.29 Aligned_cols=42 Identities=26% Similarity=0.309 Sum_probs=30.1
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeee--EEeeCCCCCceEEEecC
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQE--YVSIPKNKINLLMIGDG 318 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E--~v~i~~~k~~i~l~G~g 318 (377)
=.-||+|++++..+ -+|+|.+|+|.= .|.+.. ..+++|..+|
T Consensus 37 T~Aiq~Ai~ac~~g-------~~V~vP~G~Yli~~~l~l~g-~s~v~l~l~G 80 (422)
T 1rmg_A 37 GPAITSAWAACKSG-------GLVYIPSGNYALNTWVTLTG-GSATAIQLDG 80 (422)
T ss_dssp HHHHHHHHHHHTBT-------CEEEECSSEEEECSCEEEES-CEEEEEEECS
T ss_pred HHHHHHHHHHCCCC-------CEEEECCCeEEeCCceeecC-CCeEEEEEcC
Confidence 34699999988643 588999999984 266642 2467777665
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=69.50 E-value=2.2 Score=45.44 Aligned_cols=45 Identities=22% Similarity=0.457 Sum_probs=32.9
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeee--EEeeCCCCCceEEEecCCCceEEEc
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQE--YVSIPKNKINLLMIGDGINQTIITG 326 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E--~v~i~~~k~~i~l~G~g~~~tiI~~ 326 (377)
=.-||+||++. -+|+|.+|+|.= .|.++ .+++|.|++...++|.+
T Consensus 39 T~Aiq~Ai~aG----------g~V~IPaGtYlisg~I~L~---snv~L~Geg~~~t~Lk~ 85 (772)
T 3gqn_A 39 IRAFEKAIESG----------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRF 85 (772)
T ss_dssp HHHHHHHHHTT----------SCEEECSEEEEESSCEEEC---SSCEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcC----------CEEEECCccEEEEeEEEEC---CCcEEEEecCCCCEEEe
Confidence 34689999962 479999999984 57774 47889888755555554
No 35
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=68.33 E-value=10 Score=36.28 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=40.7
Q ss_pred ccHHHHHhhCCCCCCCCCceEEEEEecceeee-----------------EEeeCCCCCceEEEecCCCceEEEccccccC
Q 045655 270 STITDAINFAPNNTNVSNGYFLIYITAGVYQE-----------------YVSIPKNKINLLMIGDGINQTIITGNRSVVD 332 (377)
Q Consensus 270 ~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E-----------------~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~ 332 (377)
..+++||+..+.. ++.+|.+ .|++.= +|.| .+|+||+|.+. .|.|
T Consensus 24 ~~L~~al~~~~~~-----~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v---~sn~TI~G~~a---~i~g------ 85 (330)
T 2qy1_A 24 EAMQSAIDSYSGS-----GGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN---KSDVTIKGANG---SAAN------ 85 (330)
T ss_dssp HHHHHHHHHSCSS-----SCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES---CCSEEEEECTT---CBBS------
T ss_pred HHHHHHHhccCCC-----CCEEEEE-ccEEecccccccccccccccceeEEEc---CCCeEEECCCc---EEee------
Confidence 3678888875432 3466666 676652 3333 35677766442 1222
Q ss_pred CCCCCcceeEEEE--cCCEEEEcceEEeCC
Q 045655 333 GWTTFNSATFIVV--APNFVASSITFRNTA 360 (377)
Q Consensus 333 g~~t~~sat~~v~--~~~f~~~~it~~Nta 360 (377)
.-|.|. +++++++||+|++-.
T Consensus 86 -------~gl~i~~~~~NVIIrnl~i~~~~ 108 (330)
T 2qy1_A 86 -------FGIRVVGNAHNVIIQNMTIGLLQ 108 (330)
T ss_dssp -------SEEEEESSCEEEEEESCEEESCS
T ss_pred -------eeEEEeCCCCeEEEeCeEEeCCC
Confidence 345665 689999999999754
No 36
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=65.28 E-value=18 Score=35.82 Aligned_cols=42 Identities=26% Similarity=0.425 Sum_probs=29.8
Q ss_pred EEeeCCCCCceEEEecCCCceEEEccccccCCCCCCcceeEEEE-cCCEEEEcceEEeCC
Q 045655 302 YVSIPKNKINLLMIGDGINQTIITGNRSVVDGWTTFNSATFIVV-APNFVASSITFRNTA 360 (377)
Q Consensus 302 ~v~i~~~k~~i~l~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~-~~~f~~~~it~~Nta 360 (377)
+|.| ..|+||+|.|. ...|.|. .|.|. .++++++||+|++..
T Consensus 127 ~i~v---~snkTI~G~G~-~~~i~g~-------------gl~i~~~~NVIIrNl~i~~~~ 169 (416)
T 1vbl_A 127 MVYV---GSNTSIIGVGK-DAKIKGG-------------GFLIKNVDNVIIRNIEFEAPL 169 (416)
T ss_dssp EEEC---CSSEEEEECTT-CCEEESC-------------EEEEESCEEEEEESCEEECCC
T ss_pred EEEe---CCCeeEEecCC-CeEEecC-------------EEEeecCceEEEeCeEEEcCc
Confidence 4555 36999999985 4455542 34554 689999999999863
No 37
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=57.27 E-value=15 Score=37.95 Aligned_cols=40 Identities=20% Similarity=0.242 Sum_probs=31.1
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceee-eEEeeCCCCCceEEEecC
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQ-EYVSIPKNKINLLMIGDG 318 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~-E~v~i~~~k~~i~l~G~g 318 (377)
=.-||+|++++..+ -+|+|.+|+|. ..|.+ +.+++|..+.
T Consensus 173 t~aiq~Ai~~c~~g-------~~v~vP~G~y~~g~i~l---ks~v~L~l~~ 213 (608)
T 2uvf_A 173 TKAIQQAIDSCKPG-------CRVEIPAGTYKSGALWL---KSDMTLNLQA 213 (608)
T ss_dssp HHHHHHHHHTCCTT-------EEEEECSEEEEECCEEC---CSSEEEEECT
T ss_pred HHHHHHHHHhcCCC-------CEEEECCCceEecceec---cCceEEEecC
Confidence 45699999988654 78999999997 46777 3578888754
No 38
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=55.36 E-value=7.7 Score=37.10 Aligned_cols=40 Identities=13% Similarity=-0.024 Sum_probs=22.0
Q ss_pred cccHHHHHhhCCCCCCCCCceEEEEEecceeeeEEeeCCCCCceEEEecC
Q 045655 269 FSTITDAINFAPNNTNVSNGYFLIYITAGVYQEYVSIPKNKINLLMIGDG 318 (377)
Q Consensus 269 f~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E~v~i~~~k~~i~l~G~g 318 (377)
|..||+ +++.... +.-+++|.+|+|.. +.+ +.+++|+.+|
T Consensus 8 ~~aiq~-i~aC~~~-----gg~~v~vP~G~~l~-l~l---~~~~~l~~~g 47 (335)
T 1k5c_A 8 VDDAKD-IAGCSAV-----TLNGFTVPAGNTLV-LNP---DKGATVTMAG 47 (335)
T ss_dssp TTGGGG-CTTCSEE-----EECCEEECTTCCEE-ECC---CTTCEEEECS
T ss_pred HHHhHH-HHhcccC-----CCCEEEECCCEEEE-EEe---CCCeEEEEec
Confidence 556777 7766432 12467777787762 232 2345555444
No 39
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=43.95 E-value=16 Score=36.68 Aligned_cols=46 Identities=24% Similarity=0.275 Sum_probs=34.5
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEecc----eee--eEEeeCCCCCceEEEecCCC
Q 045655 268 NFSTITDAINFAPNNTNVSNGYFLIYITAG----VYQ--EYVSIPKNKINLLMIGDGIN 320 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G----~Y~--E~v~i~~~k~~i~l~G~g~~ 320 (377)
+-.-||+||+++-.. .+.-+|||.+| +|. ..+.++ .+++|.|++..
T Consensus 67 DTaAIQkAIdaA~a~----~GGGtVyVPaG~~~~tYlvt~tI~Lk---SnV~L~Ge~~A 118 (514)
T 2vbk_A 67 NYQAIQNAIDAVASL----PSGGELFIPASNQAVGYIVGSTLLIP---GGVNIRGVGKA 118 (514)
T ss_dssp CHHHHHHHHHHHHTS----TTCEEEECCCCSSTTCEEESSCEEEC---TTEEEECCSTT
T ss_pred cHHHHHHHHHHHhhc----CCCeEEEECCCCcceeEEECCeEEec---CCeEEEEecCc
Confidence 466799999987543 12378999999 886 357774 58999999854
No 40
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=33.60 E-value=25 Score=34.96 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=28.8
Q ss_pred ccHHHHHhhCCCCCCCCCceEEEEEecceeee-EEeeCCCCCceEEEecC
Q 045655 270 STITDAINFAPNNTNVSNGYFLIYITAGVYQE-YVSIPKNKINLLMIGDG 318 (377)
Q Consensus 270 ~TIq~Av~a~p~~~~~~~~~~~I~I~~G~Y~E-~v~i~~~k~~i~l~G~g 318 (377)
.-||+|++++... +.-+|+|.+|+|.- .|.+ +.+++|..+|
T Consensus 45 ~Aiq~Ai~~c~~~-----ggg~v~vP~G~yl~~~l~l---~s~v~l~l~g 86 (448)
T 3jur_A 45 ESFKRAIEELSKQ-----GGGRLIVPEGVFLTGPIHL---KSNIELHVKG 86 (448)
T ss_dssp HHHHHHHHHHHHH-----TCEEEEECSSEEEESCEEC---CTTEEEEESS
T ss_pred HHHHHHHHhhhhc-----CCeEEEECCCcEEEeeeEe---CCCcEEEEEE
Confidence 4699999988642 12689999999963 4444 3577776664
No 41
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=28.89 E-value=60 Score=33.54 Aligned_cols=43 Identities=23% Similarity=0.327 Sum_probs=31.1
Q ss_pred CcccHHHHHhhCCCCCCCCCceEEEEEecc-eeee-------------EEeeCCCCCceEEEecC
Q 045655 268 NFSTITDAINFAPNNTNVSNGYFLIYITAG-VYQE-------------YVSIPKNKINLLMIGDG 318 (377)
Q Consensus 268 ~f~TIq~Av~a~p~~~~~~~~~~~I~I~~G-~Y~E-------------~v~i~~~k~~i~l~G~g 318 (377)
+=+-||+|++++... +.-+|+|.+| +|.- .|.+ |.+++|+-+|
T Consensus 63 dT~AIqkAIdaCs~~-----GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L---kSnVtL~LdG 119 (600)
T 2x6w_A 63 SRQYLQAAIDYVSSN-----GGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL---RSNVNLNIEG 119 (600)
T ss_dssp CHHHHHHHHHHHHHT-----TCEEEEECTTCEEEECSCCCGGGGGGTEEEEC---CTTEEEEECS
T ss_pred CHHHHHHHHHHhhhc-----CCCEEEECCCCEEEecccccccccccccceEE---cCceEEeeec
Confidence 334699999988653 2268999999 9965 3555 4578888777
No 42
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=25.13 E-value=51 Score=33.63 Aligned_cols=17 Identities=18% Similarity=0.282 Sum_probs=12.3
Q ss_pred EEcCCEEEEcceEEeCC
Q 045655 344 VVAPNFVASSITFRNTA 360 (377)
Q Consensus 344 v~~~~f~~~~it~~Nta 360 (377)
....++.+++|+|+|+.
T Consensus 290 ~~c~nV~I~Giti~Nsp 306 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPP 306 (549)
T ss_dssp SSCEEEEEESCEEECCS
T ss_pred CCceEEEEECcEEECCC
Confidence 34567788888888874
No 43
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=23.50 E-value=1.3e+02 Score=21.10 Aligned_cols=30 Identities=17% Similarity=0.040 Sum_probs=25.9
Q ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045655 97 TLSISAIRALEDCRLLADLNMDYLSTSYQT 126 (377)
Q Consensus 97 ~~d~~~k~aL~DC~el~~~Aid~L~~S~~~ 126 (377)
.++..+..|++.|.+-|-++-..+.+.+..
T Consensus 33 ~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~ 62 (64)
T 3cjh_B 33 NLSSQEEQCLSNCVNRFLDTNIRIVNGLQN 62 (64)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478899999999999999998888777654
No 44
>1r7c_A Genome polyprotein; membrane anchor domain, HCV NS5A protein, structure, peptide, membrane protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 1r7d_A 1r7e_A 1r7f_A 1r7g_A
Probab=21.17 E-value=51 Score=20.25 Aligned_cols=12 Identities=33% Similarity=0.387 Sum_probs=7.4
Q ss_pred hhhHHHHHHHHH
Q 045655 139 ADDVQALLSAIL 150 (377)
Q Consensus 139 ~~Dl~TWLSAAl 150 (377)
..|.+|||+|-+
T Consensus 16 LsDfktWlkaki 27 (31)
T 1r7c_A 16 LSDFKTWLKAKL 27 (31)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc
Confidence 456677776654
Done!