BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045658
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206
PE=2 SV=2
Length = 184
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 30 AAVPMQQKVTK----LHFFLHDIL-SGQN----PSAVMVARANLTDGDKSP-TPFGSVFA 79
+A+P ++K K L F+ HDIL +G+N SA++ A ++ +P + FG++
Sbjct: 19 SAIPNKRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIV 78
Query: 80 VDDALRVGPESNSEIIGNAQGLYVSSSQDANNFAIVMYIDFALTSGEFKGSSFSVFSRNP 139
DD + + +S+ +G AQG Y+ ++ N + + F L S +G+ + +P
Sbjct: 79 FDDPITLSHSLSSKQVGRAQGFYIYDTK--NTYTSWLSFTFVLNSTHHQGT-ITFAGADP 135
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNG 172
+ +R+++V GG G F M RG A + T F G
Sbjct: 136 IVAKTRDISVTGGTGDFFMHRGIATITTDAFEG 168
>sp|B7JNG6|GSA1_BACC0 Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain AH820) GN=hemL1 PE=3 SV=1
Length = 434
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPIAMERG----KGAYFWDVDGNKYIDY 60
>sp|Q81YV0|GSA1_BACAN Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus anthracis
GN=hemL1 PE=1 SV=1
Length = 434
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPIAMERG----KGAYFWDVDGNKYIDY 60
>sp|C3LHA0|GSA1_BACAC Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=hemL1 PE=3 SV=1
Length = 434
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPIAMERG----KGAYFWDVDGNKYIDY 60
>sp|C3PCZ3|GSA1_BACAA Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus anthracis
(strain A0248) GN=hemL1 PE=3 SV=1
Length = 434
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPIAMERG----KGAYFWDVDGNKYIDY 60
>sp|Q6HNS8|GSA1_BACHK Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=hemL1
PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|B7IW22|GSA2_BACC2 Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Bacillus cereus
(strain G9842) GN=hemL2 PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|C1EWG6|GSA1_BACC3 Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain 03BB102) GN=hemL1 PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|A0R9G6|GSA1_BACAH Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus
thuringiensis (strain Al Hakam) GN=hemL1 PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|Q81I85|GSA1_BACCR Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=hemL1 PE=3 SV=1
Length = 432
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 21 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 58
>sp|B7H9S6|GSA1_BACC4 Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain B4264) GN=hemL1 PE=3 SV=1
Length = 432
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 21 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 58
>sp|B9J3N2|GSA1_BACCQ Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain Q1) GN=hemL1 PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|B7HU66|GSA1_BACC7 Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain AH187) GN=hemL1 PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|Q73DX4|GSA1_BACC1 Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain ATCC 10987) GN=hemL1 PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|Q63GB4|GSA1_BACCZ Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
(strain ZK / E33L) GN=hemL1 PE=3 SV=1
Length = 432
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 21 VNSPSRSFKAVGGGAPVAMERG----KGAYFWDVDGNKYIDY 58
>sp|P26949|CAF1A_YERPE F1 capsule-anchoring protein OS=Yersinia pestis GN=caf1A PE=1 SV=2
Length = 833
Score = 31.6 bits (70), Expect = 3.5, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 63 NLTDGDKSPTPFGSVFAVDDALRVGPESNSEIIGNAQGLYVS 104
+L D P PFGS+ ++ G S+S I+G+ G+Y++
Sbjct: 751 HLKRSDNKPVPFGSIVTIE-----GQSSSSGIVGDNSGVYLT 787
>sp|A9VSS7|GSA1_BACWK Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus
weihenstephanensis (strain KBAB4) GN=hemL1 PE=3 SV=1
Length = 432
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 21 VNSPSRSFKAVGGGSPVAMERG----KGAYFWDVDGNKYIDY 58
>sp|A7GL00|GSA1_BACCN Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus cereus
subsp. cytotoxis (strain NVH 391-98) GN=hemL1 PE=3 SV=1
Length = 432
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 23 VNSPSRSFKAVGGGSPVAMERG----KGAYFWDVDGNKYIDY 60
>sp|B9E7Y3|GSA2_MACCJ Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Macrococcus
caseolyticus (strain JCSC5402) GN=hemL2 PE=3 SV=1
Length = 428
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG MARG + AYF +G+ IDY
Sbjct: 21 VNSPSRSYKAVGGGAPVVMARG----EGAYFYDVDGNKYIDY 58
>sp|Q54JA4|SIBD_DICDI Integrin beta-like protein D OS=Dictyostelium discoideum GN=sibD PE=1
SV=1
Length = 1957
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 70 SPTPFGSVFA------VDDALRVGPE---SNSEIIGNAQGLYVSSSQDANNFAIVMYIDF 120
+PTPF +V + VDD+ + P+ S ++IGN Q Y+++ N ++ + D
Sbjct: 1319 TPTPFSNVLSTFSINCVDDSEKTTPKGVLSTGDVIGNVQYYYINTPPKTNISSVKLSQD- 1377
Query: 121 ALTSGEFKGS 130
+ + F+GS
Sbjct: 1378 SFIAFSFEGS 1387
>sp|B1HUT1|GSA1_LYSSC Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Lysinibacillus
sphaericus (strain C3-41) GN=hemL1 PE=3 SV=1
Length = 429
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 140 VSEPSRELAVVGGRGKFRMARGFAVLKTAYFNGTNGDAIIDY 181
V+ PSR VGG M RG K AYF +G+ IDY
Sbjct: 21 VNSPSRSYKAVGGGSPVAMVRG----KGAYFWDVDGNRYIDY 58
>sp|Q9IK91|PHOSP_NIPAV Phosphoprotein OS=Nipah virus GN=P/V/C PE=1 SV=1
Length = 709
Score = 30.4 bits (67), Expect = 6.6, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 25 YSESVAAVPMQQKVTKLHFFLHDILSGQNPSAVMVARANLTDGDK-SPTPFGSVFAVD-D 82
Y+ +A ++ +H +G NP+AV NL+D K SP + +
Sbjct: 159 YAPEIAVSKEDRETDLVHLENKLSTTGLNPTAVPFTLRNLSDPAKDSPVIAEHYYGLGVK 218
Query: 83 ALRVGPESNSEIIGNAQGLYVSSSQDANNFAIVMYIDFALTSGEFKGSSFSVFSRNPVSE 142
VGP+++ + ++ LY S ++A+ EF GSS V +S
Sbjct: 219 EQNVGPQTSRNVNLDSIKLYTSDDEEADQLEF---------EDEFAGSSSEVIV--GISP 267
Query: 143 PSRELAVVGGRGKFRMAR 160
E + VGG+ + R
Sbjct: 268 EDEEPSSVGGKPNESIGR 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,128,019
Number of Sequences: 539616
Number of extensions: 2748584
Number of successful extensions: 5415
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5412
Number of HSP's gapped (non-prelim): 29
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)