Query 045659
Match_columns 461
No_of_seqs 278 out of 1959
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 06:52:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045659.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045659hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 2.9E-50 1E-54 394.4 36.1 429 27-458 9-448 (460)
2 3mkt_A Multi antimicrobial ext 99.9 5.5E-21 1.9E-25 186.6 18.8 205 27-232 235-446 (460)
3 1pw4_A Glycerol-3-phosphate tr 94.3 3.5 0.00012 38.6 31.1 26 428-453 409-434 (451)
4 3o7q_A L-fucose-proton symport 92.3 7.1 0.00024 36.3 31.0 47 29-75 25-73 (438)
5 4ev6_A Magnesium transport pro 42.3 45 0.0015 29.9 6.2 50 406-458 281-338 (339)
6 4aps_A DI-OR tripeptide H+ sym 38.3 2.5E+02 0.0084 26.1 26.8 52 398-450 418-469 (491)
7 2k1k_A Ephrin type-A receptor 33.1 60 0.002 18.3 3.4 25 431-455 13-37 (38)
8 4hkr_A Calcium release-activat 21.2 3.3E+02 0.011 22.1 14.8 80 62-142 57-144 (214)
9 2iub_A CORA, divalent cation t 17.9 69 0.0024 29.0 2.8 19 440-458 344-362 (363)
10 2ks1_B Epidermal growth factor 16.2 1.8E+02 0.0062 17.0 4.5 11 447-457 29-39 (44)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=2.9e-50 Score=394.41 Aligned_cols=429 Identities=23% Similarity=0.346 Sum_probs=397.3
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHhhCCcchhhH
Q 045659 27 KEFKKLSRIAAPMVGIFLFDYLLQVVSTMMVGHLGQLQLASVAIATSVTNVVGFSFLSGLAGGLETLCGQAFGAQQYQRL 106 (461)
Q Consensus 27 ~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~s~~~g~~~~~~~ 106 (461)
+..|++++.++|.+++++...+.+.+|+.+++|+|++++|+++++.++..+. ..+..|++.+..+.++|+.|++|+|+.
T Consensus 9 ~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~~~~~ 87 (460)
T 3mkt_A 9 KEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGRQHKI 87 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSSTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChhHH
Confidence 7899999999999999999999999999999999999999999999998887 888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcchHHHHHH
Q 045659 107 GIHTNSAIISLIAICPIICIPWIFMNKLLLTLGQDPLVSHNAQKYSLCLIPALFANAILQPITRFMQTQSLICPMLITYF 186 (461)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 186 (461)
++.+++++.+..+.+++.+++..+.++++.+++.|++..+.+..|+++..++.++..+.....+.+|+.||++.++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 167 (460)
T 3mkt_A 88 PFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGF 167 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 99999999999999999877778889999888889999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHhh----cCCCcchhHHHHHHHHHHHHHHHHHHHhcCcccch-h-ccCCCHHHHHHHHHHHHHhhHH
Q 045659 187 CILCFHIPVCWILVFK----LKLGILGAAAAFSLSTWLNVVLVSPYVMYSSSCKD-T-RAKLSKEAFLAIKQFFAFGLPS 260 (461)
Q Consensus 187 ~~~~~~i~~~~~li~~----~~~g~~g~~~a~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~k~~~~~~~p~ 260 (461)
++.++|+++++++++. +++|+.|+++++.+++.+..++..++++|+++.+. + ++++.+.+++..|+++++++|.
T Consensus 168 ~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 247 (460)
T 3mkt_A 168 IGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPV 247 (460)
T ss_dssp HHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHhhHH
Confidence 9999999999999975 37999999999999999999988888776543321 1 1222234567899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHH
Q 045659 261 ALMLCLRWWSMEMLILSSGFLPNPRLETSGLSICLAITTLHFIIPYGIGAAASTRVSNELGAGNPEAARRAAWSAVFVAT 340 (461)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (461)
++++.........++.++++++ ++++++|+++.++.++...+..+++++..|.+++++|+||.+++++..+++.++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g--~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~~~~~ 325 (460)
T 3mkt_A 248 AAALFFEVTLFAVVALLVAPLG--STVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGL 325 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999986 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCcHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHhhcCccchhHHHHHHHHHHhhhhHH
Q 045659 341 LEAVIASTILFSCRFIVGYAYSNDKQVVDFIAAMTPLICLSIILDTLHAVFQGVSRGCGWQHIGACINFVAFYLVGLPVG 420 (461)
Q Consensus 341 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~l~ 420 (461)
.++++.++++.++++++..+|++|+|+.+.+..++++++++.++.+++....+++++.||+|.+++.++.+.|++++|++
T Consensus 326 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~l~ 405 (460)
T 3mkt_A 326 ATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTG 405 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999989999999
Q ss_pred HHHHHh----cC-CchhHhhHHHHHHHHHHHHHHHHHHHhcCC
Q 045659 421 GVLGFV----VH-LRGKGLWTGIVVGSAVQSTMLCLITCFTNW 458 (461)
Q Consensus 421 ~~l~~~----~~-~g~~g~~~a~~~~~~~~~~~~~~~~~~~~w 458 (461)
+++... ++ +|+.|+|+++.+++.+..++..++++|...
T Consensus 406 ~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~~ 448 (460)
T 3mkt_A 406 YILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQK 448 (460)
T ss_dssp HHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSCC
T ss_pred HHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999876 56 899999999999999999988877776543
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.86 E-value=5.5e-21 Score=186.64 Aligned_cols=205 Identities=18% Similarity=0.276 Sum_probs=192.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHhhCCcchhhH
Q 045659 27 KEFKKLSRIAAPMVGIFLFDYLLQVVSTMMVGHLGQLQLASVAIATSVTNVVGFSFLSGLAGGLETLCGQAFGAQQYQRL 106 (461)
Q Consensus 27 ~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~s~~~g~~~~~~~ 106 (461)
+..|++++.+.|..++++...+...+|+.+++++|++++|+|+++.++.++. ..+..+++++..|.+++++|+||+|+.
T Consensus 235 ~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~~~~~ 313 (460)
T 3mkt_A 235 KELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQDTKGA 313 (460)
T ss_dssp SSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 6789999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHcCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcchHHHHH
Q 045659 107 GIHTNSAIISLIAICPIICIP-WIFMNKLLLTLGQDPLVSHNAQKYSLCLIPALFANAILQPITRFMQTQSLICPMLITY 185 (461)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 185 (461)
++..+.+..+...++++.+++ .++.+++..++..|++..+.+..++++.++..++.+++....+.+++.||++.++..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 393 (460)
T 3mkt_A 314 AIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRT 393 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 999999999999999999987 8999999999988888889999999999999999999999999999999999999999
Q ss_pred HHHh-hhhHHHHHHHHhh----cC-CCcchhHHHHHHHHHHHHHHHHHHHhcC
Q 045659 186 FCIL-CFHIPVCWILVFK----LK-LGILGAAAAFSLSTWLNVVLVSPYVMYS 232 (461)
Q Consensus 186 ~~~~-~~~i~~~~~li~~----~~-~g~~g~~~a~~i~~~~~~~~~~~~~~~~ 232 (461)
+.+. ++++++++++... ++ +|..|+++++.+++.+..+...+.++|+
T Consensus 394 ~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~ 446 (460)
T 3mkt_A 394 FISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWL 446 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSS
T ss_pred HHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 8999999999875 56 9999999999999999988776666543
No 3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=94.31 E-value=3.5 Score=38.64 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=14.9
Q ss_pred CCchhHhhHHHHHHHHHHHHHHHHHH
Q 045659 428 HLRGKGLWTGIVVGSAVQSTMLCLIT 453 (461)
Q Consensus 428 ~~g~~g~~~a~~~~~~~~~~~~~~~~ 453 (461)
..|....++...+..++..++.....
T Consensus 409 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 434 (451)
T 1pw4_A 409 FFGWDGGFMVMIGGSILAVILLIVVM 434 (451)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 35766666666666666555544433
No 4
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=92.34 E-value=7.1 Score=36.34 Aligned_cols=47 Identities=6% Similarity=-0.006 Sum_probs=23.7
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHHH
Q 045659 29 FKKLSRIAAPMVGIFLFDYLLQVVSTMMVGHL--GQLQLASVAIATSVT 75 (461)
Q Consensus 29 ~~~~~~~~~p~~~~~~~~~~~~~i~~~~i~~l--g~~~~~~~~~~~~i~ 75 (461)
.+.+.....-.+...............+...+ ++.+.+.......+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~ 73 (438)
T 3o7q_A 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFG 73 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 34444455555555555555555555555555 455555444433333
No 5
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=42.29 E-value=45 Score=29.92 Aligned_cols=50 Identities=14% Similarity=0.204 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhhHHHHHHHhc-CCc-------hhHhhHHHHHHHHHHHHHHHHHHHhcCC
Q 045659 406 CINFVAFYLVGLPVGGVLGFVV-HLR-------GKGLWTGIVVGSAVQSTMLCLITCFTNW 458 (461)
Q Consensus 406 ~~~~~~~~~~~i~l~~~l~~~~-~~g-------~~g~~~a~~~~~~~~~~~~~~~~~~~~w 458 (461)
..++++ ++.+|+.++.+.+. +++ -+|-|++ ....++.+++.++++||++|
T Consensus 281 ~LTiit--~IflP~T~IaGiyGMNf~~mPel~~~~gy~~~-l~~m~~~~~~~~~~fkrk~W 338 (339)
T 4ev6_A 281 ILTMVT--TIFAVPMWITGIYGMNFSYLPLANNPQGFWLV-MALMVVIIMIFVYIFRRSGW 338 (339)
T ss_dssp HHHHHH--HHSSHHHHHHHHTTCCCSCCTTSSCTTHHHHH-HHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHH--HHHHHHHHHHhhccCcCCCCCCccCchHHHHH-HHHHHHHHHHHHHHHHHcCC
Confidence 344444 56778887776541 111 2344443 33445556667788899999
No 6
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=38.31 E-value=2.5e+02 Score=26.07 Aligned_cols=52 Identities=8% Similarity=-0.047 Sum_probs=22.5
Q ss_pred cCccchhHHHHHHHHHHhhhhHHHHHHHhcCCchhHhhHHHHHHHHHHHHHHH
Q 045659 398 CGWQHIGACINFVAFYLVGLPVGGVLGFVVHLRGKGLWTGIVVGSAVQSTMLC 450 (461)
Q Consensus 398 ~g~~~~~~~~~~~~~~~~~i~l~~~l~~~~~~g~~g~~~a~~~~~~~~~~~~~ 450 (461)
..+.......+.... +.......+.....+.+....+.......++..++.+
T Consensus 418 ~~~g~~~g~~~~~~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (491)
T 4aps_A 418 AFNSQMMSMWFLSSS-VGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLV 469 (491)
T ss_dssp TCSSSSTHHHHHHHH-HHHHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444443 3333333333333344555555554444444444443
No 7
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=33.07 E-value=60 Score=18.31 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=11.2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHh
Q 045659 431 GKGLWTGIVVGSAVQSTMLCLITCF 455 (461)
Q Consensus 431 ~~g~~~a~~~~~~~~~~~~~~~~~~ 455 (461)
+.|+.++...+-.+...+.++++||
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeeehHHHHHHHHHHHHHHHHeec
Confidence 3455555544444444444444433
No 8
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=21.21 E-value=3.3e+02 Score=22.08 Aligned_cols=80 Identities=13% Similarity=-0.044 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHhh--------CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 045659 62 QLQLASVAIATSVTNVVGFSFLSGLAGGLETLCGQAF--------GAQQYQRLGIHTNSAIISLIAICPIICIPWIFMNK 133 (461)
Q Consensus 62 ~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~s~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (461)
+.-+.+|+....+.-.+ ..+..-+++-..|.+-..- .+.-+++.+.++-.+..++..+|+++.+.-+..--
T Consensus 57 ~~LLi~fav~Ttllv~v-ml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall~ 135 (214)
T 4hkr_A 57 PGMLIAFAICTTLLVAV-HMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAILC 135 (214)
T ss_dssp --CHHHHHHHHHHHHHH-HHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34567788777777665 6666666655555443321 23345778888989999998888887765222223
Q ss_pred HHHHcCCCh
Q 045659 134 LLLTLGQDP 142 (461)
Q Consensus 134 l~~~~~~~~ 142 (461)
.+.++..+.
T Consensus 136 WVKF~~~~~ 144 (214)
T 4hkr_A 136 WVKFYDLSR 144 (214)
T ss_dssp HHHHTTTCH
T ss_pred eEEeecCCc
Confidence 345554443
No 9
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=17.92 E-value=69 Score=29.04 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 045659 440 VGSAVQSTMLCLITCFTNW 458 (461)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~w 458 (461)
+..++.++..++++||++|
T Consensus 344 ~~m~~i~~~~~~~Fkrk~W 362 (363)
T 2iub_A 344 AVMGVIAVIMVVYFKKKKW 362 (363)
T ss_dssp HHHHHHHHHHHTTTTSCC-
T ss_pred HHHHHHHHHHHHHHHHccc
Confidence 3344455667788888888
No 10
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=16.23 E-value=1.8e+02 Score=16.96 Aligned_cols=11 Identities=9% Similarity=-0.118 Sum_probs=5.1
Q ss_pred HHHHHHHHhcC
Q 045659 447 TMLCLITCFTN 457 (461)
Q Consensus 447 ~~~~~~~~~~~ 457 (461)
+..++++||++
T Consensus 29 ~~~~~~~RRr~ 39 (44)
T 2ks1_B 29 LGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHhhhhH
Confidence 44445555543
Done!