Query 045670
Match_columns 319
No_of_seqs 147 out of 1535
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:18:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045670.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045670hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 2.1E-49 4.5E-54 355.3 20.6 226 43-287 3-228 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 1.9E-48 4.2E-53 361.0 25.2 227 46-287 49-275 (296)
3 PLN00182 putative aquaporin NI 100.0 2.1E-45 4.5E-50 338.8 25.4 216 48-285 39-254 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 2E-45 4.3E-50 340.3 24.4 217 47-286 67-283 (298)
5 PTZ00016 aquaglyceroporin; Pro 100.0 6.3E-45 1.4E-49 338.4 23.8 229 48-286 47-291 (294)
6 KOG0224 Aquaporin (major intri 100.0 2.9E-46 6.4E-51 337.3 13.5 230 45-285 26-275 (316)
7 PF00230 MIP: Major intrinsic 100.0 1.8E-44 4E-49 325.2 21.1 221 44-280 1-227 (227)
8 PLN00166 aquaporin TIP2; Provi 100.0 4.6E-44 9.9E-49 325.7 23.0 228 46-293 13-245 (250)
9 PRK05420 aquaporin Z; Provisio 100.0 9.3E-44 2E-48 320.7 23.1 226 50-286 1-229 (231)
10 PLN00027 aquaporin TIP; Provis 100.0 1.5E-43 3.3E-48 323.2 22.8 219 47-285 16-239 (252)
11 COG0580 GlpF Glycerol uptake f 100.0 1.7E-43 3.7E-48 316.3 20.2 223 49-285 3-240 (241)
12 PLN00167 aquaporin TIP5; Provi 100.0 4.9E-42 1.1E-46 313.2 23.3 220 45-285 16-240 (256)
13 PLN00183 putative aquaporin NI 100.0 1.3E-41 2.8E-46 312.6 22.3 220 44-286 38-257 (274)
14 cd00333 MIP Major intrinsic pr 100.0 1.1E-39 2.5E-44 294.3 21.0 224 52-283 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 1.6E-37 3.5E-42 278.1 19.6 211 56-280 1-216 (216)
16 PLN00182 putative aquaporin NI 99.5 5.1E-14 1.1E-18 130.4 9.9 98 49-152 157-254 (283)
17 cd00333 MIP Major intrinsic pr 99.5 1.3E-13 2.7E-18 124.6 9.6 99 48-149 127-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.5 2E-13 4.4E-18 127.0 9.1 99 49-153 185-283 (298)
19 PLN00183 putative aquaporin NI 99.4 2.5E-13 5.5E-18 125.3 9.1 99 50-154 160-258 (274)
20 TIGR00861 MIP MIP family chann 99.4 8.8E-13 1.9E-17 118.2 8.5 95 49-146 120-215 (216)
21 PLN00184 aquaporin NIP1; Provi 99.4 1.1E-12 2.4E-17 122.2 9.3 105 174-285 50-155 (296)
22 PLN00166 aquaporin TIP2; Provi 99.4 1.7E-12 3.6E-17 118.6 8.0 104 175-285 15-124 (250)
23 PLN00167 aquaporin TIP5; Provi 99.3 8.7E-12 1.9E-16 114.2 8.8 108 175-285 19-128 (256)
24 PLN00027 aquaporin TIP; Provis 99.3 1.7E-11 3.7E-16 112.2 10.1 107 176-285 18-126 (252)
25 KOG0223 Aquaporin (major intri 99.3 7.1E-12 1.5E-16 113.0 6.3 100 48-154 129-228 (238)
26 PTZ00016 aquaglyceroporin; Pro 99.2 8.1E-11 1.7E-15 110.0 8.8 102 176-284 48-150 (294)
27 PRK05420 aquaporin Z; Provisio 99.1 3.7E-10 8E-15 102.2 9.9 99 49-153 130-229 (231)
28 COG0580 GlpF Glycerol uptake f 98.9 1.6E-09 3.4E-14 97.7 6.1 105 177-284 4-108 (241)
29 PF00230 MIP: Major intrinsic 98.9 6.9E-09 1.5E-13 93.5 9.6 95 48-147 132-227 (227)
30 KOG0224 Aquaporin (major intri 98.7 2E-08 4.3E-13 92.1 4.5 99 176-284 30-134 (316)
31 COG2116 FocA Formate/nitrite f 91.8 2.9 6.4E-05 38.6 11.5 158 117-288 95-261 (265)
32 PRK11562 nitrite transporter N 72.7 81 0.0018 29.2 15.4 78 117-198 89-171 (268)
33 PRK09713 focB putative formate 65.2 85 0.0018 29.3 10.7 77 119-198 99-181 (282)
34 PF04632 FUSC: Fusaric acid re 59.4 2.2E+02 0.0047 29.3 14.5 56 98-153 355-413 (650)
35 PRK10631 p-hydroxybenzoic acid 48.6 3.2E+02 0.0069 28.8 12.6 47 107-153 380-426 (652)
36 PF01226 Form_Nir_trans: Forma 46.6 2.2E+02 0.0048 25.9 10.1 107 87-198 60-171 (250)
37 PRK10805 formate transporter; 39.9 3.2E+02 0.0069 25.5 13.0 105 87-197 71-181 (285)
38 PF03606 DcuC: C4-dicarboxylat 38.3 24 0.00053 35.2 2.6 28 236-264 171-199 (465)
39 PLN02731 Putative lipid phosph 35.7 3.2E+02 0.0069 26.2 9.5 49 260-308 238-287 (333)
40 PF03033 Glyco_transf_28: Glyc 33.9 14 0.00029 29.6 -0.0 20 104-123 6-25 (139)
41 PF12811 BaxI_1: Bax inhibitor 27.6 4.2E+02 0.0091 24.7 8.6 43 109-151 110-164 (274)
42 KOG3030 Lipid phosphate phosph 27.0 1.4E+02 0.0031 28.4 5.5 48 239-286 210-264 (317)
43 COG1289 Predicted membrane pro 26.4 6.8E+02 0.015 26.2 11.1 28 125-152 399-426 (674)
44 KOG1330 Sugar transporter/spin 22.7 64 0.0014 32.5 2.4 26 261-286 187-212 (493)
45 PF07857 DUF1632: CEO family ( 21.1 4E+02 0.0086 24.5 7.1 25 127-151 217-241 (254)
46 PRK12446 undecaprenyldiphospho 20.9 23 0.0005 33.9 -1.0 21 102-122 7-27 (352)
47 PF14034 Spore_YtrH: Sporulati 20.9 1.7E+02 0.0037 23.1 3.9 47 107-153 53-101 (102)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-49 Score=355.32 Aligned_cols=226 Identities=28% Similarity=0.484 Sum_probs=187.4
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhc
Q 045670 43 YEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQG 122 (319)
Q Consensus 43 ~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 122 (319)
.+..+.+.+|++++||++|++++|++|+++..............+++.+|+.+++++++++++||||+|||||+++++.|
T Consensus 3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~ 82 (238)
T KOG0223|consen 3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGG 82 (238)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhC
Confidence 35567899999999999999999999998776543222233456899999999999999999999999999999999999
Q ss_pred cccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhccc
Q 045670 123 IVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDK 202 (319)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~ 202 (319)
++++.+++.|+++|++|+++|+.+.+.+.+.+... .+. ..+.++++.+..|+++.|++.||+|+++++...+|+
T Consensus 83 ~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~---~~~---~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~ 156 (238)
T KOG0223|consen 83 KISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNR---KGL---GLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDP 156 (238)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHHHheecCccccc---CCc---ceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecC
Confidence 99999999999999999999999999999885111 111 112234689999999999999999999998878898
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhh
Q 045670 203 RRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKT 282 (319)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~ 282 (319)
|+. ...++.+|+++++.+ ..+ .++||++|||||+|||+++.+ .|++|||||+||++|+++++++|++
T Consensus 157 ~~~-----~~a~l~IG~~v~~~~----l~~--g~~TG~sMNPArSfGpAvv~~--~w~~hwiYwvgP~~Ga~~a~~~y~~ 223 (238)
T KOG0223|consen 157 RRS-----ELAPLAIGFSVGLNI----LAA--GPFTGASMNPARSFGPAVVYG--SWDDHWIYWVGPLLGAILAALIYRL 223 (238)
T ss_pred CCc-----ccHHHHHHHHHHHHH----Hee--cCcCcCccCcHHHhhHHHHhc--CCCcEEEEEhhHHHHHHHHHHHHHH
Confidence 876 223344454444444 333 489999999999999999998 6999999999999999999999999
Q ss_pred cCCCc
Q 045670 283 LPEEG 287 (319)
Q Consensus 283 ~~~~~ 287 (319)
+....
T Consensus 224 v~~~~ 228 (238)
T KOG0223|consen 224 VFIPD 228 (238)
T ss_pred hccCc
Confidence 97654
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.9e-48 Score=361.05 Aligned_cols=227 Identities=23% Similarity=0.355 Sum_probs=176.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccc
Q 045670 46 FSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVT 125 (319)
Q Consensus 46 ~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 125 (319)
.+.+++|++++||+|||+|+|++++++..............++++||+++++.+++++++||||+|||||+++++.|+++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~ 128 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFP 128 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCC
Confidence 35678999999999999999999987665432211223456889999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCcc
Q 045670 126 LARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRC 205 (319)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~ 205 (319)
|.++++||++|++|+++|+++++.+++...... .+.... ...+.++.+..++|+.|+++||+|+++++.+..|++..
T Consensus 129 ~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~--~~~~~~-~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~ 205 (296)
T PLN00184 129 LKQVPAYVISQVIGSTLAAATLRLLFGLDHDVC--SGKHDV-FIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcc--ccccce-eeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC
Confidence 999999999999999999999999886543211 111100 00122345789999999999999999998765554432
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 206 KELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 206 ~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
.. ..++.||+++...++ .. .++||++|||||||||+++.+ .|+++||||+||++|+++++++|+++..
T Consensus 206 ~~----~~~l~IG~~v~~~~~----~~--g~~TG~smNPAR~~GPal~~~--~~~~~WVy~vgPilGa~laal~y~~l~~ 273 (296)
T PLN00184 206 GE----LAGLAIGSTVLLNVL----IA--APVSSASMNPGRSLGPAMVYG--CYKGIWIYIVAPTLGAIAGAWVYNTVRY 273 (296)
T ss_pred Cc----chHHHHHHHHHHHHH----Hh--cccCccccCchhhHHHHHHhh--cccccchHHhHHHHHHHHHHHHHHHHhc
Confidence 11 223444444444433 22 478999999999999999987 7899999999999999999999999975
Q ss_pred Cc
Q 045670 286 EG 287 (319)
Q Consensus 286 ~~ 287 (319)
.+
T Consensus 274 ~~ 275 (296)
T PLN00184 274 TD 275 (296)
T ss_pred CC
Confidence 43
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=2.1e-45 Score=338.81 Aligned_cols=216 Identities=23% Similarity=0.354 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLA 127 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (319)
..++|++++||+|||+|+|+++++++.............+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~ 118 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWY 118 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHH
Confidence 46889999999999999999999776533211112345578899999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCcccc
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRCKE 207 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~~ 207 (319)
+++.||++|++|+++|+++++.+++... .+.. .+.++.+..++++.|+++|++|+++++....+++...
T Consensus 119 ~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~------~~~~----~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~- 187 (283)
T PLN00182 119 QVPLYIGAQLTGSLLASLTLRLMFNVTP------EAFF----GTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVG- 187 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc------ccee----eCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCC-
Confidence 9999999999999999999999885321 1111 1223467889999999999999998876655543211
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 208 LGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 208 ~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
. .. ++.+|+.+++..... .++||+++||||+|||+++.+ .|.++|+||+||++|+++++++|+++..
T Consensus 188 -~--~~----~l~iGl~V~~~~~~~--g~~SGa~lNPARt~gpal~~~--~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 188 -E--LA----GIAVGMTIILNVFVA--GPISGASMNPARSLGPAIVMG--RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred -c--ch----hHHHHHHHHHHHHHc--cccCccccChHHHHHHHHHhc--cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 12 344444444443322 468999999999999999976 7999999999999999999999998864
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=2e-45 Score=340.25 Aligned_cols=217 Identities=26% Similarity=0.368 Sum_probs=171.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccc
Q 045670 47 SPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTL 126 (319)
Q Consensus 47 ~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 126 (319)
+.+++|++++||+|||+|+|++++..+.............+++++|+++++.+++++++||||+|||||+++++.++++|
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~ 146 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPW 146 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcH
Confidence 34688999999999999999998754432111111234457899999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCccc
Q 045670 127 ARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRCK 206 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~ 206 (319)
.+.++||++|++|+++|+++++.++++.. .++++. ++++..++++.|+++||+|+++++....|+++..
T Consensus 147 ~~~~~YiiaQilGAi~aa~~~~~~~~~~~-----~~g~t~------p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~ 215 (298)
T PLN00026 147 KHVPAYIAAQVSASICASFALKGVFHPFM-----SGGVTV------PSVSTGQAFALEFIITFNLLFVVTAVATDTRAVG 215 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc-----cCceee------ecccHHHHHHHHHHHHHHHHHhheeeecCCCCcC
Confidence 99999999999999999999999886532 122221 3568899999999999999999876555554322
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhcCCC
Q 045670 207 ELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPEE 286 (319)
Q Consensus 207 ~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~~ 286 (319)
. ..++.+|+ .+.+..... .++||++|||||+|||+++.+ +|+++|+||+||++|+++++++|+++...
T Consensus 216 ~----~~~l~iGl----~V~~~~l~~--g~~TGa~mNPARtlgPal~~~--~~~~~wVy~vaPilGAilga~ly~~~~~~ 283 (298)
T PLN00026 216 E----LAGIAVGA----TVMLNILVA--GPSTGGSMNPVRTLGPAVAAG--NYRAIWIYLVAPTLGALAGAGTYTAVKLR 283 (298)
T ss_pred C----ccchHHHH----HHHHHHHHh--cccCccccChHHHHHHHHhcC--CchheeHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1 12333444 444433322 468999999999999999976 79999999999999999999999998544
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=6.3e-45 Score=338.36 Aligned_cols=229 Identities=24% Similarity=0.282 Sum_probs=175.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLA 127 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (319)
++++|++++||+|||+|+|++++++..............+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~ 126 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWK 126 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHH
Confidence 67889999999999999999998765543222123345688999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcce--------eecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhh
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGC--------LIAGNGTSAGISAETALILEFTCTFVVLFVGVTIA 199 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~--------~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~ 199 (319)
+.+.|+++|++|+++|+++++.++++...+... +.. ..+...+.++.+..++++.|+++||+|+++++.+
T Consensus 127 ~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~- 204 (294)
T PTZ00016 127 KLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGI-PELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAI- 204 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcC-cccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999999999999999999999998875432211 000 0011123356788999999999999999998765
Q ss_pred cccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHh----CCCCCC----cceehhhhHHH
Q 045670 200 FDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLH----GGPLWK----GHWVFWVGPFL 271 (319)
Q Consensus 200 ~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~----~~~~~~----~~wvywvgP~~ 271 (319)
.|+++....+ ..++ .||+.+++..... .++||++||||||||||++. |...|+ |+||||+||++
T Consensus 205 ~d~~~~~~~~--~~pl----~IGl~v~~i~~~~--g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~v 276 (294)
T PTZ00016 205 TDPNNCPAFN--YLPV----AVGLLVFVIGISF--GGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFV 276 (294)
T ss_pred ccCccCCCcC--cccH----HHHHHHHHHHHhc--cCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHH
Confidence 5655533222 2233 3444444333222 46899999999999999997 323443 68999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 045670 272 ACVVYYGFAKTLPEE 286 (319)
Q Consensus 272 Gai~a~l~~~~~~~~ 286 (319)
|+++++++|+++.++
T Consensus 277 Ga~~aally~~ll~~ 291 (294)
T PTZ00016 277 GAVLGMFLYDKFIPP 291 (294)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999998654
No 6
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-46 Score=337.31 Aligned_cols=230 Identities=21% Similarity=0.266 Sum_probs=186.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCC-cchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcc
Q 045670 45 FFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSE-QKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGI 123 (319)
Q Consensus 45 ~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 123 (319)
..++.+.|++++||+||++|++++++++++...+..+. ....+.++||+.+++.+++.+.+||||+|||||+++++.||
T Consensus 26 ~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 26 HIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 33578999999999999999999999999887765544 45668999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCccee-ecCCC--------CCCCcChhHHHHHHHHHHHHHHHH
Q 045670 124 VTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCL-IAGNG--------TSAGISAETALILEFTCTFVVLFV 194 (319)
Q Consensus 124 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~-~~~~~--------~~~~~s~~~~~~~E~~~TfiLv~~ 194 (319)
++|.+.++|+++|++||++|++.+|.++.+.+.+.. -|..+ .+|++ +.+.++.+++|++|+++|.+|+.+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~-Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFD-GGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988766543 22222 23333 346889999999999999999998
Q ss_pred HHHhhcccCcccccchHHHHHHHHHHHHHHHH-HHHHhccCCCCCCCcccchhhHHHHHHh-----CC-C---CCCccee
Q 045670 195 GVTIAFDKRRCKELGLVVVCAIVAGAMAIAVF-VSITVTQKPGYAGVGLNPARCLGPALLH-----GG-P---LWKGHWV 264 (319)
Q Consensus 195 il~~~~d~~~~~~~~~~~~~~~i~~~ig~~v~-~~~~~~~~~~~tG~~~NPAr~lg~al~~-----~~-~---~~~~~wv 264 (319)
++ +..|+|+.-+.+. .++.+|+++. ++.+++.+ +|..+|||||||||+|+ |. . +-.++|+
T Consensus 185 l~-aI~D~rN~~p~g~------~p~~iG~lv~~Ig~s~G~N---~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~Wv 254 (316)
T KOG0224|consen 185 LF-AITDKRNPIPTGL------HPLVIGILVVAIGMSLGYN---TGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWV 254 (316)
T ss_pred ee-EEecCCCCCCcch------hHHHHHHHHHHHHHHhhcc---cCcccCcccccchHHHHHHHhcchhhcccCCceeee
Confidence 65 6678888544443 2455555555 44555544 55569999999999995 21 1 1157899
Q ss_pred hhhhHHHHHHHHHHHHhhcCC
Q 045670 265 FWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 265 ywvgP~~Gai~a~l~~~~~~~ 285 (319)
+|++|++|+++++++|.++..
T Consensus 255 PivgPl~Gai~G~~iY~~~Ig 275 (316)
T KOG0224|consen 255 PIVGPLIGAILGGWIYDFFIG 275 (316)
T ss_pred eehhhhhhhhhhhhhheeeee
Confidence 999999999999999998843
No 7
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.8e-44 Score=325.22 Aligned_cols=221 Identities=32% Similarity=0.548 Sum_probs=176.7
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCC------CcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHH
Q 045670 44 EFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVS------EQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFI 117 (319)
Q Consensus 44 ~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~------~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 117 (319)
|.++.+++|++++||+||++++|+++++.+.......+ .....+++.+|+.+++.++.++++||||+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 56678999999999999999999999876643322211 123457888999999999999999999999999999
Q ss_pred HHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHH
Q 045670 118 AALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVT 197 (319)
Q Consensus 118 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~ 197 (319)
.++.|+++|.+++.|+++|++|+++|+.+++.++++.... .+..... +.++.+..++++.|+++|++|+++++.
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~---~~~~~~~---~~~~~s~~~~~~~E~~~t~il~~~i~~ 154 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSA---AGIFATT---PPPGISLGQAFFSEFIGTFILVLVILA 154 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTC---TTTTSCG---STTTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccc---ccccccc---ccccchhhhhhhhhhhhhhHHHhhhhh
Confidence 9999999999999999999999999999999999875211 1111111 224688999999999999999999887
Q ss_pred hhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHH
Q 045670 198 IAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYY 277 (319)
Q Consensus 198 ~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~ 277 (319)
...++++.+ .+. ..++.++++++++.+... ++||++|||||+|||+++.+ .|+++||||+||++|+++++
T Consensus 155 ~~~~~~~~~-~~~-~~p~~ig~~v~~~~~~~~------~~tG~~~NPAr~~g~~l~~~--~~~~~wvy~~~P~~Ga~~a~ 224 (227)
T PF00230_consen 155 VADDKRKFP-LGP-LAPLAIGLTVGALVLAGG------PYTGASLNPARALGPALFSG--IWDYFWVYWVGPFIGAILAA 224 (227)
T ss_dssp HTSTTSSST-SSG-GHHHHHHHHHHHHHHHHH------HHHST-SSHHHHHHHHHHHT--HHTTTTHHHHHHHHHHHHHH
T ss_pred hcccccccc-ccc-ccceeEEEEEeecccccc------cccccccCchhhcCceeecc--cCCeEEEEEehHHHHHHHHH
Confidence 665554433 222 446667777776665543 46799999999999999998 59999999999999999999
Q ss_pred HHH
Q 045670 278 GFA 280 (319)
Q Consensus 278 l~~ 280 (319)
++|
T Consensus 225 ~~Y 227 (227)
T PF00230_consen 225 LLY 227 (227)
T ss_dssp HHH
T ss_pred hhC
Confidence 987
No 8
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=4.6e-44 Score=325.69 Aligned_cols=228 Identities=25% Similarity=0.408 Sum_probs=177.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhhc-ccCCC----CCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHH
Q 045670 46 FSPKMWRAAFTELVATAFLVFTLTTSIISC-LDSHV----SEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAAL 120 (319)
Q Consensus 46 ~~~~~~r~~~aEfigTf~lvf~~~~~~~~~-~~~~~----~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 120 (319)
++.+.+|++++||+|||+|+|+++++++.. ..... ......+++++|+.+++.+++++++||||+|||||++.++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 346788999999999999999999886642 11111 1234468899999999999999999999999999999999
Q ss_pred hccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhc
Q 045670 121 QGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAF 200 (319)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~ 200 (319)
.|+++|.+.++|+++|++|+++|+.+++.+++++.... .+...+.+..++++.|+++||+|+++++....
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~ 162 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPT----------HGVAAGLGAIEGVVMEIVVTFALVYTVYATAA 162 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc----------cccCCCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998875421110 01223578899999999999999999987766
Q ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHH
Q 045670 201 DKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFA 280 (319)
Q Consensus 201 d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~ 280 (319)
|+++..... ..++.+| +.+.+.... ..++||++|||||+||||++.+ +|+++||||+||++|+++++++|
T Consensus 163 ~~~~~~~~~--~~p~~iG----l~v~~~~~~--~~~~tG~~~NPAR~~gPal~~~--~~~~~wvywvgPi~Ga~~aa~~y 232 (250)
T PLN00166 163 DPKKGSLGT--IAPIAIG----FIVGANILA--AGPFSGGSMNPARSFGPAVVSG--DFSQIWIYWVGPLVGGALAGLIY 232 (250)
T ss_pred ccccccccc--chhHHHH----HHHHHHHHc--ccCCCCCccCchHhhHHHHhcC--CCcccchhhHHHHHHHHHHHHHH
Confidence 655432111 2344444 444433332 2478999999999999999987 69999999999999999999999
Q ss_pred hhcCCCccccccc
Q 045670 281 KTLPEEGLVWEDK 293 (319)
Q Consensus 281 ~~~~~~~~~~~~~ 293 (319)
+.+..+..+.++.
T Consensus 233 ~~l~~~~~~~~~~ 245 (250)
T PLN00166 233 GDVFIGSYAAAPT 245 (250)
T ss_pred HHHhcccCCCCCC
Confidence 8886544444443
No 9
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=9.3e-44 Score=320.67 Aligned_cols=226 Identities=24% Similarity=0.287 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCC-cchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 50 MWRAAFTELVATAFLVFTLTTSIISCLDSHVSE-QKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 50 ~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
++|++++||+||++|+|+++++++......... ....+++++|+.+++.+++++++||+|+|||||+++++.|+++|.+
T Consensus 1 ~~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~ 80 (231)
T PRK05420 1 MFKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKE 80 (231)
T ss_pred ChHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHH
Confidence 379999999999999999998764422111111 2345799999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhcccchh-hhccCcceeecCCCCC-CCcChhHHHHHHHHHHHHHHHHHHHhhcccCccc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMSHNAA-RRYSLGGCLIAGNGTS-AGISAETALILEFTCTFVVLFVGVTIAFDKRRCK 206 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~ 206 (319)
.+.|+++|++|+++|+.+++.+++.... +....+..+.+...+. ...+..++++.|+++|++|+++++.. .|+++.+
T Consensus 81 ~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~~~ 159 (231)
T PRK05420 81 LVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKRAPA 159 (231)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 9999999999999999999988765321 1000000111111111 23578899999999999999998754 5654422
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhcCCC
Q 045670 207 ELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPEE 286 (319)
Q Consensus 207 ~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~~ 286 (319)
+ ..++.+|+.+..+.+. + .++||++|||||+|||+++.++..|+++|+||+||++|+++++++|+++..+
T Consensus 160 --~--~~p~~iGl~v~~~~~~----~--~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 160 --G--FAPIAIGLALTLIHLI----S--IPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred --c--chHHHHHHHHHHHHHH----h--hccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 1 2344455554444332 2 3689999999999999999874445699999999999999999999998653
No 10
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.5e-43 Score=323.16 Aligned_cols=219 Identities=25% Similarity=0.421 Sum_probs=174.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhhhcc--cCCC---CCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHh
Q 045670 47 SPKMWRAAFTELVATAFLVFTLTTSIISCL--DSHV---SEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQ 121 (319)
Q Consensus 47 ~~~~~r~~~aEfigTf~lvf~~~~~~~~~~--~~~~---~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 121 (319)
+++.+|++++||+|||+|+|+++++++... .... ....+..++++|+.+++.+++++++||||+|||+|++.++.
T Consensus 16 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 16 HPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIG 95 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHh
Confidence 457899999999999999999998865421 1111 12344689999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcc
Q 045670 122 GIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFD 201 (319)
Q Consensus 122 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d 201 (319)
|+++|.+.++|+++|++|+++|+.+++.+.+... .+ ...+.++++..++++.|+++||+|+++++....|
T Consensus 96 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~ 165 (252)
T PLN00027 96 GNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE-----TS-----AFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVD 165 (252)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----cc-----cccCCCCccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999987754321 11 1112346789999999999999999999877667
Q ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHh
Q 045670 202 KRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAK 281 (319)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~ 281 (319)
+++... + ...++.+|+.+..+++. ..++||++|||||+||||++.+ .|+++||||+||++|+++++++|+
T Consensus 166 ~~~~~~-~-~~~p~~iGl~v~~~~~~------~g~~TG~~~NPAR~~gPal~~~--~~~~~wvy~vgP~~Ga~laa~~y~ 235 (252)
T PLN00027 166 PKKGDL-G-IIAPIAIGFIVGANILA------GGAFDGASMNPAVSFGPAVVSW--TWTNHWVYWAGPLIGGGIAGLVYE 235 (252)
T ss_pred cccCCc-c-chHHHHHHHHHHHHHHh------cccccccccCcchhHHHHHHhh--cchhhhHHHHHHHHHHHHHHHHHH
Confidence 654321 1 13344455544443332 2468999999999999999987 799999999999999999999999
Q ss_pred hcCC
Q 045670 282 TLPE 285 (319)
Q Consensus 282 ~~~~ 285 (319)
++..
T Consensus 236 ~l~~ 239 (252)
T PLN00027 236 LIFI 239 (252)
T ss_pred HHhc
Confidence 9864
No 11
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-43 Score=316.28 Aligned_cols=223 Identities=22% Similarity=0.297 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCC---CCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSH---VSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVT 125 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 125 (319)
++.|++++||+||++|++.++++++...... ....+..++++||+.+.+.+++++++||||+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 4568899999999999999999988775433 2334566999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHhhcccchhhhcc-----CcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhc
Q 045670 126 LARAATYVLAQCLGSIVGFLIINSVMSHNAARRYS-----LGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAF 200 (319)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~ 200 (319)
|++++.||++|++|+++|+.+++.+++++..+... .|...+.|. ..+..++|+.|+++||+|++.++.+.+
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~----~~~~~~~fl~E~v~T~~L~~~Ila~~~ 158 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPG----GYSLGQAFLIEFVGTFVLVLGILALTD 158 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCC----cccHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999987765541 222222332 247889999999999999999988766
Q ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHh---C-C---CCCCcceehhhhHHHHH
Q 045670 201 DKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLH---G-G---PLWKGHWVFWVGPFLAC 273 (319)
Q Consensus 201 d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~---~-~---~~~~~~wvywvgP~~Ga 273 (319)
|++. ..+ ..|+.+|+.+....+. ..+.||.++||||||||+++. + . .++.|+|+||+||++|+
T Consensus 159 ~~~~--~~~--~apl~iGllv~~i~~s------~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa 228 (241)
T COG0580 159 DGNA--NAG--FAPLAIGLLVTAIGLS------LGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGA 228 (241)
T ss_pred cCcc--ccc--chHHHHHHHHHHHHHH------hcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHH
Confidence 5544 112 3455566555543221 236789999999999999954 3 1 12259999999999999
Q ss_pred HHHHHHHhhcCC
Q 045670 274 VVYYGFAKTLPE 285 (319)
Q Consensus 274 i~a~l~~~~~~~ 285 (319)
++++++|+.+..
T Consensus 229 ~lg~~~~~~~~~ 240 (241)
T COG0580 229 ILGALLYKLLLG 240 (241)
T ss_pred HHHHHHHHHHcc
Confidence 999999997653
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=4.9e-42 Score=313.21 Aligned_cols=220 Identities=23% Similarity=0.306 Sum_probs=172.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhhccc--CCC---CCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHH
Q 045670 45 FFSPKMWRAAFTELVATAFLVFTLTTSIISCLD--SHV---SEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAA 119 (319)
Q Consensus 45 ~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~--~~~---~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~ 119 (319)
...++++|++++||+|||+|+|++++++..... .+. ....+.+++.+|+.+++.+++++++||+|+|||||++.+
T Consensus 16 ~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~ 95 (256)
T PLN00167 16 SVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMA 95 (256)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHH
Confidence 345678999999999999999999988764321 111 123556899999999999999999999999999999999
Q ss_pred HhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhh
Q 045670 120 LQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIA 199 (319)
Q Consensus 120 l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~ 199 (319)
+.|+++|.+++.|+++|++|+++|+.+++.++++.... .+....+.+..++++.|+++|++|+++++..
T Consensus 96 ~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~----------~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~- 164 (256)
T PLN00167 96 VGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVP----------TYKIAEEMTGFGASVLEGVLTFGLVYTVYAA- 164 (256)
T ss_pred HhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccccc----------ccccCcccchHHHHHHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999999998876542111 0111124567899999999999999998754
Q ss_pred cccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHH
Q 045670 200 FDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGF 279 (319)
Q Consensus 200 ~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~ 279 (319)
.|+++....+ ..++.+|+ ++.+.... ..++||++|||||+|||+++.+ .|+++|+||+||++|+++++++
T Consensus 165 ~~~~~~~~~~--~~pl~iGl----~v~~~~~~--~g~~TG~a~NPAR~~gPal~~~--~~~~~wvywvgP~~Ga~l~a~~ 234 (256)
T PLN00167 165 GDPRRGLLGA--IGPLAIGL----VAGANVLA--AGPFSGGSMNPACAFGSAVVAG--SFKNQAVYWVGPLLGGAVAGLL 234 (256)
T ss_pred ccccccCCCC--cchHHHHH----HHHHHHHh--ccCCCCcccCcccchHHHHhcc--CccCcEEEeHHHHHHHHHHHHH
Confidence 5554432211 22344444 44433332 2468999999999999999976 6999999999999999999999
Q ss_pred HhhcCC
Q 045670 280 AKTLPE 285 (319)
Q Consensus 280 ~~~~~~ 285 (319)
|+++..
T Consensus 235 y~~l~~ 240 (256)
T PLN00167 235 YDNVVF 240 (256)
T ss_pred HHHHhC
Confidence 999865
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.3e-41 Score=312.56 Aligned_cols=220 Identities=23% Similarity=0.304 Sum_probs=173.0
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcc
Q 045670 44 EFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGI 123 (319)
Q Consensus 44 ~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 123 (319)
...+.+.+|++++||++||+|+|++++++..........+...+++.+|+.+++.+++++++||||+|||||+++++.|+
T Consensus 38 ~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~ 117 (274)
T PLN00183 38 YDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117 (274)
T ss_pred CcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC
Confidence 44567889999999999999999999876553321111234457889999999999999999999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccC
Q 045670 124 VTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKR 203 (319)
Q Consensus 124 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~ 203 (319)
++|.+.++||++|++|+++|+.+++.+++... +... +.+..+..++++.|+++|++|+++++.+..+++
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~------~~~~-----~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~ 186 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKA------DLMT-----TKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQ 186 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------cccc-----CCCcccHHHHHHHHHHHHHHHHHhhheeecccc
Confidence 99999999999999999999999988876421 1111 123445689999999999999998876544432
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhc
Q 045670 204 RCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTL 283 (319)
Q Consensus 204 ~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~ 283 (319)
+... ..++.+|+.+.+.++. . .++||++|||||+|+|+++.. .|+++|+||+||++|+++++++|+++
T Consensus 187 ~~~~----~~~l~iGl~v~~~v~~----~--g~~TG~~~NPArtlgpai~~~--~~~~~wvy~vapilGailaa~l~~~l 254 (274)
T PLN00183 187 SLGH----LSGFVIGIAIGLAVLI----T--GPVSGGSMNPARSLGPAIVSW--DFKDIWIYITAPTIGAVAGALMFHLL 254 (274)
T ss_pred CCCC----ceehHHHHHHHHHHHh----c--cCCCCCEeCHHHHHHHHHhCC--ChhheehHHHHHHHHHHHHHHHHHHH
Confidence 2211 1234455555544432 2 468999999999999999875 79999999999999999999999999
Q ss_pred CCC
Q 045670 284 PEE 286 (319)
Q Consensus 284 ~~~ 286 (319)
..+
T Consensus 255 ~~~ 257 (274)
T PLN00183 255 RLR 257 (274)
T ss_pred hcc
Confidence 643
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=1.1e-39 Score=294.30 Aligned_cols=224 Identities=25% Similarity=0.368 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccCCC-CCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccchh
Q 045670 52 RAAFTELVATAFLVFTLTTSIISCLDSHV-SEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLARAA 130 (319)
Q Consensus 52 r~~~aEfigTf~lvf~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 130 (319)
|++++||+|||+|+|+++++........+ ..+....++.+|+.+.+.+++++++||+|+|||+|++.++.|+++|.+.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 57899999999999999988766443221 12345689999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecC--CCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCccccc
Q 045670 131 TYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAG--NGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRCKEL 208 (319)
Q Consensus 131 ~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~~~ 208 (319)
+|+++|++|+++|+.+.+.+++++..+.........+. ..+.++.+..++++.|+++|++|+++++....++++...
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~- 159 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPP- 159 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCC-
Confidence 99999999999999999999887665433211100000 112246788999999999999999998866543332111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCC-CCCCcceehhhhHHHHHHHHHHHHhhc
Q 045670 209 GLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGG-PLWKGHWVFWVGPFLACVVYYGFAKTL 283 (319)
Q Consensus 209 ~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~-~~~~~~wvywvgP~~Gai~a~l~~~~~ 283 (319)
....++.+|+.+..+++. + .++||+++||||+|+|+++.+. ..|+++|+||++|++|+++++++|+++
T Consensus 160 -~~~~~~~iGl~v~~~~~~----~--g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 160 -GGLAPLAIGLLVAAIGLA----G--GPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred -CCcHHHHHHHHHHHHHHH----h--hcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 112344445444444432 2 3689999999999999999863 259999999999999999999999874
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=1.6e-37 Score=278.09 Aligned_cols=211 Identities=28% Similarity=0.419 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCC---CCC--cchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccchh
Q 045670 56 TELVATAFLVFTLTTSIISCLDSH---VSE--QKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLARAA 130 (319)
Q Consensus 56 aEfigTf~lvf~~~~~~~~~~~~~---~~~--~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 130 (319)
+||+||++|+|++++++....... ... ....+++.+|+.+.+.+++++++||+|+|||||++.++.|+++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 599999999999998876532211 111 245689999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCcccccch
Q 045670 131 TYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRCKELGL 210 (319)
Q Consensus 131 ~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~~~~~ 210 (319)
.|+++|++|+++|+.+++.++++...... .. ... ..++.+..++++.|+++|++|+++++.. .++++....+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~--~~-~~~---~~~~~~~~~~~~~E~i~T~~lv~~~~~~-~~~~~~~~~~- 152 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNL--AV-NGS---GAAGVSSGQAFFVEFIGTAILVLVIFAT-TDPRNRVPRG- 152 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCc--cc-cCC---CCCcccHHHHHHHHHHHHHHHHHHHhee-ecCCCCCCCC-
Confidence 99999999999999999998876542111 10 001 1235788999999999999999988754 4443332111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHH
Q 045670 211 VVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFA 280 (319)
Q Consensus 211 ~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~ 280 (319)
... ++.+|+.+++..... .++||+++||||+|+|+++.+...|+++|+||++|++|+++++++|
T Consensus 153 ~~~----~~~iG~~v~~~~~~~--g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 153 GFA----PLAIGLLVFLIHLSM--GPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred ccH----HHHHHHHHHHHHHhC--CCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 122 344444444443322 4689999999999999999865679999999999999999998775
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.52 E-value=5.1e-14 Score=130.43 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+.++.+++|+++|++|++++++..... . ......++++|+.+++.++..+++||+|+|||+|++.++.++ .|.+
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~---~--~~~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~ 230 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDS---R--AVGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKG 230 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheecc---c--cCCcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccc
Confidence 568999999999999999887643221 1 112236889999999999999999999999999999999754 5889
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhcc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMS 152 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (319)
.|+||++|++|+++|+++++.+..
T Consensus 231 ~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 231 IWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988764
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.48 E-value=1.3e-13 Score=124.60 Aligned_cols=99 Identities=20% Similarity=0.230 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccc--c
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIV--T 125 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~--~ 125 (319)
.+.++.++.|+++|++|++..++..... ....+....++.+|+.+..+.+..+++||+|+|||++++..+.++. +
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~---~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~ 203 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDP---NGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARH 203 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcccc---ccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccc
Confidence 4678999999999999999887654211 1112234578999999999999999999999999999999999988 7
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHh
Q 045670 126 LARAATYVLAQCLGSIVGFLIINS 149 (319)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~ 149 (319)
|.+.++||++|++|+++|+++++.
T Consensus 204 ~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 204 WHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred cceeehhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999987654
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.46 E-value=2e-13 Score=126.99 Aligned_cols=99 Identities=26% Similarity=0.277 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+.++.++.||++||+|++++++.... .+. .....++++|+.+++.++..+++||+|+|||+|++..+.++ +|..
T Consensus 185 s~~~a~~~Efi~TfiLv~vi~~v~~~---~~~--~~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~ 258 (298)
T PLN00026 185 STGQAFALEFIITFNLLFVVTAVATD---TRA--VGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRA 258 (298)
T ss_pred cHHHHHHHHHHHHHHHHHhheeeecC---CCC--cCCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-Cchh
Confidence 56899999999999999987643211 111 11235789999999999999999999999999999999876 8999
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
.|+||++|++|+++|+++++.+.-.
T Consensus 259 ~wVy~vaPilGAilga~ly~~~~~~ 283 (298)
T PLN00026 259 IWIYLVAPTLGALAGAGTYTAVKLR 283 (298)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999998776433
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.45 E-value=2.5e-13 Score=125.30 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccch
Q 045670 50 MWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLARA 129 (319)
Q Consensus 50 ~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 129 (319)
.++.++.|+++|+++++.+++..... .......++.+|+.+++.++..+++||+|+|||+|++.++.+ .+|.+.
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~-----~~~~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~ 233 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQP-----QSLGHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDI 233 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccc-----cCCCCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhe
Confidence 57899999999999999877654321 111123578899999999999999999999999999999886 589999
Q ss_pred hhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 130 ATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 130 ~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
|+||++|++|+++|+.+++.++...
T Consensus 234 wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 234 WIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999887654
No 20
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.39 E-value=8.8e-13 Score=118.17 Aligned_cols=95 Identities=23% Similarity=0.360 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhc-ccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQG-IVTLA 127 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g-~~~~~ 127 (319)
+.++.++.|+++|++|+++.+...... + ........++.+|+.+...++..+++||+|+|||++++..+.+ ..+|.
T Consensus 120 ~~~~~~~~E~i~T~~lv~~~~~~~~~~--~-~~~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~ 196 (216)
T TIGR00861 120 SSGQAFFVEFIGTAILVLVIFATTDPR--N-RVPRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWG 196 (216)
T ss_pred cHHHHHHHHHHHHHHHHHHHheeecCC--C-CCCCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcccccc
Confidence 678999999999999999887654321 1 1111225789999999999999999999999999999999875 57899
Q ss_pred chhhhhhhhhhHHHHHHHH
Q 045670 128 RAATYVLAQCLGSIVGFLI 146 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~ 146 (319)
+.++|+++|++|+++++.+
T Consensus 197 ~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 197 NHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ceeHHHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 21
>PLN00184 aquaporin NIP1; Provisional
Probab=99.39 E-value=1.1e-12 Score=122.22 Aligned_cols=105 Identities=16% Similarity=0.124 Sum_probs=74.0
Q ss_pred CcChhHHHHHHHHHHHHHHHHHHHhhcccCcc-cccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHH
Q 045670 174 GISAETALILEFTCTFVVLFVGVTIAFDKRRC-KELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPAL 252 (319)
Q Consensus 174 ~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~-~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al 252 (319)
+.+..+.++.|+++||+|++++.......... ...+.. .+++..|+.+.+..... .++||+++|||++|++++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~----~iai~~Gl~v~~~i~~~--g~iSGaH~NPAVTla~al 123 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLP----GIAIVWGLTIMVLIYSL--GHISGAHINPAVTIAFAS 123 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccH----HHHHHHHHHHHHHHHHh--cCCCccccCHHHHHHHHH
Confidence 44577899999999999999987654322111 111221 12333344444433332 468999999999999999
Q ss_pred HhCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 253 LHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 253 ~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
..+ ..|.+.|+||++|++|+++|+++++.+..
T Consensus 124 ~g~-~~~~~~~~YiiaQllGA~lga~~~~~l~~ 155 (296)
T PLN00184 124 CGR-FPLKQVPAYVISQVIGSTLAAATLRLLFG 155 (296)
T ss_pred hCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 654 58999999999999999999887777653
No 22
>PLN00166 aquaporin TIP2; Provisional
Probab=99.36 E-value=1.7e-12 Score=118.65 Aligned_cols=104 Identities=28% Similarity=0.410 Sum_probs=75.7
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhhccc--Ccc--c--ccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhH
Q 045670 175 ISAETALILEFTCTFVVLFVGVTIAFDK--RRC--K--ELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCL 248 (319)
Q Consensus 175 ~s~~~~~~~E~~~TfiLv~~il~~~~d~--~~~--~--~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~l 248 (319)
.+..+.++.|+++||+|++++.....+. ... . ..+. +.+++.+|+.+++..... .++||+++||||++
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~----~~ial~~Gl~v~~~i~~~--g~iSGah~NPAvt~ 88 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGL----VAVAVAHAFALFVGVSIA--ANISGGHLNPAVTL 88 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCcc----HHHHHHHHHHHHHHHHHH--hcccccccCHHHHH
Confidence 4567899999999999999988765431 111 1 1121 223444555555444433 46899999999999
Q ss_pred HHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 249 GPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 249 g~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
++++. +...|...|+||++|++|+++++.+++.+..
T Consensus 89 ~~~l~-g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 89 GLAIG-GNITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred HHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99996 4457889999999999999999888887753
No 23
>PLN00167 aquaporin TIP5; Provisional
Probab=99.29 E-value=8.7e-12 Score=114.25 Aligned_cols=108 Identities=25% Similarity=0.274 Sum_probs=75.6
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhhcccCcc--cccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHH
Q 045670 175 ISAETALILEFTCTFVVLFVGVTIAFDKRRC--KELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPAL 252 (319)
Q Consensus 175 ~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~--~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al 252 (319)
-+..+.++.|+++||+|+++++....+.+.. +........+.+++.+|+.+.+..+.. .+++|+++|||+++++.+
T Consensus 19 ~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~--g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 19 RNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIA--ANISGGHVNPAVTFGMAV 96 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHh--hcccccccCHHHHHHHHH
Confidence 3467899999999999999988765533211 111001112234455555555444433 468999999999999999
Q ss_pred HhCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 253 LHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 253 ~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
.. ...|...|+||++|++|+++++++++.+..
T Consensus 97 ~g-~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 128 (256)
T PLN00167 97 GG-HISVPTAMFYWISQMLASVMACLFLKVTTV 128 (256)
T ss_pred hC-CCcHhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 64 357899999999999999999887777643
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.28 E-value=1.7e-11 Score=112.24 Aligned_cols=107 Identities=24% Similarity=0.286 Sum_probs=72.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcc--cCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHH
Q 045670 176 SAETALILEFTCTFVVLFVGVTIAFD--KRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALL 253 (319)
Q Consensus 176 s~~~~~~~E~~~TfiLv~~il~~~~d--~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~ 253 (319)
...+.++.|+++||+|++++...... ....+..+.....+.+++.+|+.+.+..... .+.+|+++||||++++.+.
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~--~~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVG--ANISGGHVNPAVTFGAFIG 95 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHH--cccCccccChHHHHHHHHh
Confidence 35688999999999999998765321 1111100000011223444455444443333 3678999999999999975
Q ss_pred hCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 254 HGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 254 ~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
+...|...|+||++|++|+++++++++++..
T Consensus 96 -g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 96 -GNITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4457889999999999999999888877653
No 25
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.26 E-value=7.1e-12 Score=113.02 Aligned_cols=100 Identities=23% Similarity=0.268 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLA 127 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (319)
.+.++.++.|++.||+++|+.++..... ......++.+|+++.+.+++.+++||+++|||+|++.++..+. |.
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~------~~~~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~ 201 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDP------RRSELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WD 201 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecC------CCcccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CC
Confidence 3567999999999999999776532211 1126689999999999999999999999999999999988764 99
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
..|+||++|++|+++++++++.++.++
T Consensus 202 ~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 202 DHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred cEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999887765
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.17 E-value=8.1e-11 Score=109.97 Aligned_cols=102 Identities=25% Similarity=0.309 Sum_probs=71.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcccCccc-ccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHh
Q 045670 176 SAETALILEFTCTFVVLFVGVTIAFDKRRCK-ELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLH 254 (319)
Q Consensus 176 s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~-~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~ 254 (319)
+..+.++.|+++||+|+++......+....+ ..+. +.+++.+|+.+++..... .+.+|+++|||+++++++..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~----~~ial~~Glav~~~i~~~--g~iSG~h~NPAVTla~~l~g 121 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDY----LAITIGWGLGVTFGLLVS--AGISGGHLNPAVTLGNAVFG 121 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc----HHHHHHHHHHHHHHHHHh--cccCcCccCHHHHHHHHHhc
Confidence 3458999999999999998776543321111 1122 123444455554444433 35889999999999999975
Q ss_pred CCCCCCcceehhhhHHHHHHHHHHHHhhcC
Q 045670 255 GGPLWKGHWVFWVGPFLACVVYYGFAKTLP 284 (319)
Q Consensus 255 ~~~~~~~~wvywvgP~~Gai~a~l~~~~~~ 284 (319)
+ ..|...|+||++|++|+++|+++-+.+.
T Consensus 122 ~-i~~~~~~~YiiaQ~lGa~~ga~ll~~~~ 150 (294)
T PTZ00016 122 K-FPWKKLPGYFVAQLLGAFVGAACVYGLY 150 (294)
T ss_pred c-CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 5799999999999999999966655543
No 27
>PRK05420 aquaporin Z; Provisional
Probab=99.11 E-value=3.7e-10 Score=102.19 Aligned_cols=99 Identities=22% Similarity=0.323 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHh-cccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQ-GIVTLA 127 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~-g~~~~~ 127 (319)
+.++.++.|+++|++|+++.+...- . +.+....++.+|+.+....+..++.||+.+|||++++..+. +...+.
T Consensus 130 ~~~~~~~~E~v~T~iLv~~i~~~~~----~--~~~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~ 203 (231)
T PRK05420 130 SLLAALVCEVVLTAFFLLVILGATD----K--RAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALE 203 (231)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhC----C--CCCCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCcc
Confidence 5789999999999999997765421 1 11222468889999999999999999999999999998876 434556
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
..|+||+++++|+++++++++.++.+
T Consensus 204 ~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 204 QLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred ceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 88999999999999999998887654
No 28
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.6e-09 Score=97.72 Aligned_cols=105 Identities=23% Similarity=0.204 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCC
Q 045670 177 AETALILEFTCTFVVLFVGVTIAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGG 256 (319)
Q Consensus 177 ~~~~~~~E~~~TfiLv~~il~~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~ 256 (319)
..+-++.|+++|++|++........-...+..+....+..+++..|+.+.+..+.. .+.+|+++|||.+++.++...
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~--g~iSGaHlNPAVTi~la~~g~- 80 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAF--GGISGAHLNPAVTIALAVRGR- 80 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhc--cCcCccccChHHHHHHHHhCC-
Confidence 34567999999999999865443322211111111222334555555555554433 578999999999999999765
Q ss_pred CCCCcceehhhhHHHHHHHHHHHHhhcC
Q 045670 257 PLWKGHWVFWVGPFLACVVYYGFAKTLP 284 (319)
Q Consensus 257 ~~~~~~wvywvgP~~Gai~a~l~~~~~~ 284 (319)
..|.....||++|++|++++..+...+.
T Consensus 81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~ 108 (241)
T COG0580 81 FPWRKVLPYIVAQVLGAFAGAALLYLLY 108 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999964444443
No 29
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=98.90 E-value=6.9e-09 Score=93.49 Aligned_cols=95 Identities=19% Similarity=0.251 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCc-chHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQ-KLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTL 126 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 126 (319)
.+.++.++.|+++|++|++........ ....+ ....++.+|+.+.+..+..+..+|+.+|||++++..+.... |
T Consensus 132 ~s~~~~~~~E~~~t~il~~~i~~~~~~----~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~ 206 (227)
T PF00230_consen 132 ISLGQAFFSEFIGTFILVLVILAVADD----KRKFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-W 206 (227)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTST----TSSSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-H
T ss_pred chhhhhhhhhhhhhhHHHhhhhhhccc----ccccccccccceeEEEEEeecccccccccccccCchhhcCceeeccc-C
Confidence 357899999999999999976543321 11111 22468888999988888889999999999999998887665 8
Q ss_pred cchhhhhhhhhhHHHHHHHHH
Q 045670 127 ARAATYVLAQCLGSIVGFLII 147 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~ 147 (319)
...|+||+++++|+++|++++
T Consensus 207 ~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 207 DYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TTTTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEehHHHHHHHHHhhC
Confidence 999999999999999998763
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.66 E-value=2e-08 Score=92.09 Aligned_cols=99 Identities=21% Similarity=0.237 Sum_probs=71.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcccCcc-----cccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHH
Q 045670 176 SAETALILEFTCTFVVLFVGVTIAFDKRRC-----KELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGP 250 (319)
Q Consensus 176 s~~~~~~~E~~~TfiLv~~il~~~~d~~~~-----~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~ 250 (319)
...+.+++||++|++|++...+......-. ...+.. +.+|+.+.+.|+++ +..||+++|||.+|+-
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vn---lgwg~av~~gVyva------g~iSGgHlNPAVS~a~ 100 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVN---LGWGFAVMMGVYVA------GRISGGHLNPAVSLAM 100 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEE---ehHhHHHHHHHHhh------ccccccccCHHHHHHH
Confidence 457889999999999999876554432111 112211 23466666666654 3688999999999999
Q ss_pred HHHhCCCCCCcceehhhhHHHHHHHH-HHHHhhcC
Q 045670 251 ALLHGGPLWKGHWVFWVGPFLACVVY-YGFAKTLP 284 (319)
Q Consensus 251 al~~~~~~~~~~wvywvgP~~Gai~a-~l~~~~~~ 284 (319)
.++.. ..|..+.+|.+++++|+.++ +..|-+..
T Consensus 101 ~~~g~-~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~ 134 (316)
T KOG0224|consen 101 CILGR-LPWKKFPVYVLAQFIGAFLGAATVYGLYY 134 (316)
T ss_pred HHhcC-CChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99865 58999999999999999887 44444443
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=91.79 E-value=2.9 Score=38.57 Aligned_cols=158 Identities=14% Similarity=0.130 Sum_probs=76.8
Q ss_pred HHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccc---hhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHH
Q 045670 117 IAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHN---AARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLF 193 (319)
Q Consensus 117 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~ 193 (319)
.-...++++|++.+--|+-=.+|=++|++++..++.-. .......+...........+.+..+.|.-=.+|.++..+
T Consensus 95 ~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVcl 174 (265)
T COG2116 95 VGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCL 174 (265)
T ss_pred HHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 34567899999988888777777777777665544111 000000000000000012345678888888888888877
Q ss_pred HHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehh-----hh
Q 045670 194 VGVTIAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFW-----VG 268 (319)
Q Consensus 194 ~il~~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvyw-----vg 268 (319)
.++..-.- +.. .+. ++.+...+..|+.+ +...-.++.++=| ..+.+.+...|.++.++= +|
T Consensus 175 Avwm~~~~-k~~--~~K-----~~~m~~pv~~Fv~~--GfeH~VANm~~i~----~~~~~~~~~~~~~fi~~Nlipv~lG 240 (265)
T COG2116 175 AVWMSYSA-KDG--AAK-----IFAIILPVMLFVAS--GFEHSVANMFMIP----WAAVFSGALTWADFILKNLIPVTLG 240 (265)
T ss_pred HHHHHhcc-cch--hhH-----HHHHHHHHHHHHHc--CCceeeehHHHHH----HHHHcCChhhhHHHHHHHHHHHHHh
Confidence 77643221 111 111 12333333344432 2222233333334 233333434565522222 34
Q ss_pred HHH-HHHHHHHHHhhcCCCcc
Q 045670 269 PFL-ACVVYYGFAKTLPEEGL 288 (319)
Q Consensus 269 P~~-Gai~a~l~~~~~~~~~~ 288 (319)
=++ |+++.++.|.++.+++.
T Consensus 241 NivGG~v~vgl~Y~~~~~~~~ 261 (265)
T COG2116 241 NIVGGAVFVGLMYWYLYRKQN 261 (265)
T ss_pred chhcchhhhhHHHHHhccccc
Confidence 444 44555888888866533
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=72.68 E-value=81 Score=29.23 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=44.8
Q ss_pred HHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccc---hhhhccCcce--eecCCCCCCCcChhHHHHHHHHHHHHH
Q 045670 117 IAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHN---AARRYSLGGC--LIAGNGTSAGISAETALILEFTCTFVV 191 (319)
Q Consensus 117 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~g~~--~~~~~~~~~~~s~~~~~~~E~~~TfiL 191 (319)
...+.|+.+|++.+-.|.-=.+|=++|+++.-.++... .... .+.. ..... ..+.++.+.|+-=.+|.++.
T Consensus 89 ~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~--~~~~~~~ia~~--K~~~~~~~~f~~gI~CNwLV 164 (268)
T PRK11562 89 FGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPV--DTSIVHSVALA--KTTAPAMVLFFKGALCNWLV 164 (268)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc--hhHHHHHHHHH--HhcCCHHHHHHHHHHHHHHH
Confidence 45567888988888777666666666666654433210 0000 0000 00111 12456778888888888888
Q ss_pred HHHHHHh
Q 045670 192 LFVGVTI 198 (319)
Q Consensus 192 v~~il~~ 198 (319)
.+.++..
T Consensus 165 clavw~~ 171 (268)
T PRK11562 165 CLAIWMA 171 (268)
T ss_pred HHHHHHH
Confidence 7777654
No 33
>PRK09713 focB putative formate transporter; Provisional
Probab=65.20 E-value=85 Score=29.34 Aligned_cols=77 Identities=12% Similarity=-0.005 Sum_probs=40.7
Q ss_pred HHhccccccchhhhh----hhhhhHHHHHHHHHHhhcccchhhhccCcc--eeecCCCCCCCcChhHHHHHHHHHHHHHH
Q 045670 119 ALQGIVTLARAATYV----LAQCLGSIVGFLIINSVMSHNAARRYSLGG--CLIAGNGTSAGISAETALILEFTCTFVVL 192 (319)
Q Consensus 119 ~l~g~~~~~~~~~yi----~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~s~~~~~~~E~~~TfiLv 192 (319)
.+.++.+|++..-.+ ++-++|+++-+.+.+..-.... +....+. ..... ...+.++.+.|+--.+|-++..
T Consensus 99 ~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~-~~~~~~~~~~~ia~--~K~~~~~~~~F~~gI~CN~lVc 175 (282)
T PRK09713 99 KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMS-ENAMWGVAVLHCAE--GKMHHTFTESVSLGIMCNLMVC 175 (282)
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-cchhHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 467888988888544 4455555555544432110000 0000000 00111 1134678899999999999888
Q ss_pred HHHHHh
Q 045670 193 FVGVTI 198 (319)
Q Consensus 193 ~~il~~ 198 (319)
+.++..
T Consensus 176 laV~~~ 181 (282)
T PRK09713 176 LALWMS 181 (282)
T ss_pred HHHHHH
Confidence 887643
No 34
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=59.36 E-value=2.2e+02 Score=29.34 Aligned_cols=56 Identities=13% Similarity=0.211 Sum_probs=37.1
Q ss_pred HHHHHhccCCcccChHHHH---HHHHhccccccchhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 98 FLMVTVPLSGGHMSPVFTF---IAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 98 ~i~~~~~iSGah~NPavTl---a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
++++...-++|+.-...+. ++.-....|......++.+.++|+.+|.+..+.++|.
T Consensus 355 l~Wi~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~ 413 (650)
T PF04632_consen 355 LFWIATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPH 413 (650)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3344434445555444333 3333445588888999999999999999988888765
No 35
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=48.57 E-value=3.2e+02 Score=28.80 Aligned_cols=47 Identities=11% Similarity=0.056 Sum_probs=36.1
Q ss_pred CcccChHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 107 GGHMSPVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 107 Gah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
++-+..||..+++..-..|.....-+..++++|..+|.+..+.++|.
T Consensus 380 ~a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~f~vLP~ 426 (652)
T PRK10631 380 GAMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYFMVIIPN 426 (652)
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35667777777777777676667788889999999999888887765
No 36
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=46.64 E-value=2.2e+02 Score=25.92 Aligned_cols=107 Identities=13% Similarity=0.161 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCcccChHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchh-h-hccCcc
Q 045670 87 VPIAVFIIAFLFLMVTVPL-SGGHMSPVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAA-R-RYSLGG 163 (319)
Q Consensus 87 ~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~-~~~~g~ 163 (319)
.++.+++.+.+.++.-+.. +| |-.+.....+.|+.+|.+.+--|.-=.+|=++|+++.-.++...-. . ....+.
T Consensus 60 ~g~~F~~Gl~lIv~~g~eLfTg---n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~ 136 (250)
T PF01226_consen 60 GGLVFPIGLVLIVFLGGELFTG---NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGE 136 (250)
T ss_dssp HHHHHTHHHHHHHHHT---TTT---TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHH
T ss_pred HHHHHHHHHHHHHHhcchhccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHH
Confidence 4555555544444433322 22 5454555667888999887766666666666665555433221100 0 000000
Q ss_pred --eeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHh
Q 045670 164 --CLIAGNGTSAGISAETALILEFTCTFVVLFVGVTI 198 (319)
Q Consensus 164 --~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~ 198 (319)
...... ..+.++.+.|+-=.+|.++..+.++..
T Consensus 137 ~~~~~a~~--K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 137 YLISVAEH--KVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHHC--CSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111 135678888999999999888887653
No 37
>PRK10805 formate transporter; Provisional
Probab=39.88 E-value=3.2e+02 Score=25.53 Aligned_cols=105 Identities=16% Similarity=0.115 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHhc-cCCcccChHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhccc-chhhh--ccCc
Q 045670 87 VPIAVFIIAFLFLMVTVP-LSGGHMSPVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSH-NAARR--YSLG 162 (319)
Q Consensus 87 ~~l~~g~~~~~~i~~~~~-iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~-~~~~~--~~~g 162 (319)
.++.+.+.+.+.++.-.. .+| |-..++ ..+.||.+|.+.+-.|.-=.+|=++|++++-.+... ..... ...+
T Consensus 71 ~~~~F~vGlilIvl~g~eLFTg---n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~ 146 (285)
T PRK10805 71 GGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWG 146 (285)
T ss_pred HHHHHHHHHHHHHHhCcccchh---hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHH
Confidence 345555444444443333 344 555443 367889999888855544444444444444322211 00000 0000
Q ss_pred c--eeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHH
Q 045670 163 G--CLIAGNGTSAGISAETALILEFTCTFVVLFVGVT 197 (319)
Q Consensus 163 ~--~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~ 197 (319)
. ..+.. ...+.++.+.|+-=.+|.++..+.++.
T Consensus 147 ~~~~~~a~--~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 147 LNVLQTAD--HKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00111 112467888888888888888877764
No 38
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=38.34 E-value=24 Score=35.24 Aligned_cols=28 Identities=36% Similarity=0.775 Sum_probs=14.8
Q ss_pred CCCCCcccchh-hHHHHHHhCCCCCCccee
Q 045670 236 GYAGVGLNPAR-CLGPALLHGGPLWKGHWV 264 (319)
Q Consensus 236 ~~tG~~~NPAr-~lg~al~~~~~~~~~~wv 264 (319)
++.|+..||-- ..+..+ .+-...++.|.
T Consensus 171 g~~~~~~npf~~~iAq~i-aglp~~sg~~~ 199 (465)
T PF03606_consen 171 GFAGPPSNPFTVGIAQKI-AGLPLFSGFWF 199 (465)
T ss_pred hhcCCccChHHHHHHHHh-cCCCHHHHHHH
Confidence 46688899953 444444 23233344443
No 39
>PLN02731 Putative lipid phosphate phosphatase
Probab=35.72 E-value=3.2e+02 Score=26.24 Aligned_cols=49 Identities=12% Similarity=-0.001 Sum_probs=31.8
Q ss_pred Cccee-hhhhHHHHHHHHHHHHhhcCCCcccccccchhhhhhhhhhccCC
Q 045670 260 KGHWV-FWVGPFLACVVYYGFAKTLPEEGLVWEDKFEHDIINLARVWRNG 308 (319)
Q Consensus 260 ~~~wv-ywvgP~~Gai~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (319)
.|||. =.+|-++|.+++.+.|+...+...++++..++...+..++.+.+
T Consensus 238 ~Hh~sDVlaG~lLG~~iA~~~Y~~yfp~~~~~~~~~p~~~~~~~~~~~~~ 287 (333)
T PLN02731 238 WHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAYFQVLEAARVQ 287 (333)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCChHHHHHhhccccC
Confidence 35554 34777889999988888777766666554455555555544443
No 40
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=33.92 E-value=14 Score=29.65 Aligned_cols=20 Identities=25% Similarity=0.371 Sum_probs=16.5
Q ss_pred ccCCcccChHHHHHHHHhcc
Q 045670 104 PLSGGHMSPVFTFIAALQGI 123 (319)
Q Consensus 104 ~iSGah~NPavTla~~l~g~ 123 (319)
.=|+||+||.+.++-.+..+
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999888754
No 41
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=27.58 E-value=4.2e+02 Score=24.68 Aligned_cols=43 Identities=14% Similarity=0.133 Sum_probs=27.5
Q ss_pred cc-ChHHHHHHHHhc-----cccccch------hhhhhhhhhHHHHHHHHHHhhc
Q 045670 109 HM-SPVFTFIAALQG-----IVTLARA------ATYVLAQCLGSIVGFLIINSVM 151 (319)
Q Consensus 109 h~-NPavTla~~l~g-----~~~~~~~------~~yi~aQ~lGa~~g~~~~~~~~ 151 (319)
+. ||+..+.+++.. .++..-. ..-|+.|-+-+.++........
T Consensus 110 ~~~sp~l~~~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf~~ml~l 164 (274)
T PF12811_consen 110 KVWSPALAPIYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVFAVMLAL 164 (274)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 55 899999888764 3333211 1237888888877777666543
No 42
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=26.96 E-value=1.4e+02 Score=28.41 Aligned_cols=48 Identities=25% Similarity=0.391 Sum_probs=35.1
Q ss_pred CCcccchhhHHHHHHh---C---CCCCCccee-hhhhHHHHHHHHHHHHhhcCCC
Q 045670 239 GVGLNPARCLGPALLH---G---GPLWKGHWV-FWVGPFLACVVYYGFAKTLPEE 286 (319)
Q Consensus 239 G~~~NPAr~lg~al~~---~---~~~~~~~wv-ywvgP~~Gai~a~l~~~~~~~~ 286 (319)
|-.+.|-..|++-.+. + -.++.+||. -++|-++|..+|.+.++.+.+.
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~ 264 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPN 264 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcch
Confidence 4557777777776654 2 147788997 6788899999998888887553
No 43
>COG1289 Predicted membrane protein [Function unknown]
Probab=26.44 E-value=6.8e+02 Score=26.22 Aligned_cols=28 Identities=29% Similarity=0.505 Sum_probs=19.1
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHhhcc
Q 045670 125 TLARAATYVLAQCLGSIVGFLIINSVMS 152 (319)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (319)
+..+..-++.+=++|.++|.++.+...+
T Consensus 399 t~~r~~~ri~GTllg~~~g~~~l~~~~p 426 (674)
T COG1289 399 TRQRARQRILGTLLGLLLGLLVLLLLLP 426 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5566677777777777777777666543
No 44
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=22.69 E-value=64 Score=32.46 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=22.4
Q ss_pred cceehhhhHHHHHHHHHHHHhhcCCC
Q 045670 261 GHWVFWVGPFLACVVYYGFAKTLPEE 286 (319)
Q Consensus 261 ~~wvywvgP~~Gai~a~l~~~~~~~~ 286 (319)
+.|-||+.+.+|.+++.+...+...+
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCc
Confidence 88999999999999998887766554
No 45
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=21.07 E-value=4e+02 Score=24.51 Aligned_cols=25 Identities=12% Similarity=0.210 Sum_probs=21.0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhhc
Q 045670 127 ARAATYVLAQCLGSIVGFLIINSVM 151 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (319)
.+.+-|+.+|+.|.++.+-+++.+|
T Consensus 217 ~~~ldYvFs~f~GIfltSt~~F~~Y 241 (254)
T PF07857_consen 217 QNGLDYVFSHFSGIFLTSTVYFVIY 241 (254)
T ss_pred CcchheeHHHHhhHHHHHHHHHHHH
Confidence 4678899999999999988887665
No 46
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=20.89 E-value=23 Score=33.89 Aligned_cols=21 Identities=33% Similarity=0.436 Sum_probs=17.6
Q ss_pred HhccCCcccChHHHHHHHHhc
Q 045670 102 TVPLSGGHMSPVFTFIAALQG 122 (319)
Q Consensus 102 ~~~iSGah~NPavTla~~l~g 122 (319)
++.=+|||+.||+.++-.+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 456689999999999988864
No 47
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=20.85 E-value=1.7e+02 Score=23.06 Aligned_cols=47 Identities=19% Similarity=0.471 Sum_probs=33.8
Q ss_pred CcccChHHHHHHHH-hccc-cccchhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 107 GGHMSPVFTFIAAL-QGIV-TLARAATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 107 Gah~NPavTla~~l-~g~~-~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
||-|+|-..+---+ .|.. +..|=++|+++-++|+-.|..+++.+.++
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 55566666665433 3333 56688999999999999999999887543
Done!