Query 045670
Match_columns 319
No_of_seqs 147 out of 1535
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 07:05:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045670.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045670hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 3.6E-51 1.2E-55 382.2 22.1 229 40-286 41-271 (340)
2 3cn5_A Aquaporin; membrane pro 100.0 3.7E-50 1.3E-54 373.1 19.1 246 28-286 38-289 (304)
3 2zz9_A Aquaporin-4; water tran 100.0 8.1E-49 2.8E-53 363.3 25.0 228 41-286 3-232 (301)
4 2b6o_A Aquaporin-0, lens fiber 100.0 1.5E-48 5.2E-53 356.8 25.1 224 43-286 2-225 (263)
5 3gd8_A Aquaporin-4; proton exc 100.0 6.9E-49 2.4E-53 351.1 20.9 219 49-285 2-222 (223)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 2.9E-48 1E-52 355.1 23.1 224 43-286 4-228 (266)
7 1j4n_A Aquaporin 1; membrane p 100.0 4.3E-48 1.5E-52 355.3 22.7 226 43-286 3-235 (271)
8 1ldf_A Glycerol uptake facilit 100.0 5E-48 1.7E-52 356.9 22.0 228 48-286 5-257 (281)
9 3llq_A Aquaporin Z 2; aquapori 100.0 3.7E-48 1.3E-52 351.6 20.0 224 46-284 25-253 (256)
10 2w2e_A AQY1, aquaporin, aquapo 100.0 2.3E-47 7.7E-52 351.2 23.7 218 48-286 42-266 (279)
11 2o9g_A Aquaporin Z; integral m 100.0 4.5E-47 1.5E-51 341.9 20.3 223 49-286 3-232 (234)
12 3c02_A Aquaglyceroporin; membr 100.0 6E-47 2E-51 345.7 17.4 229 48-286 7-244 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 3.6E-45 1.2E-49 332.0 21.9 222 49-285 3-245 (246)
14 2f2b_A Aquaporin AQPM; protein 99.5 5.2E-14 1.8E-18 127.2 10.7 100 48-152 141-245 (246)
15 3llq_A Aquaporin Z 2; aquapori 99.2 2.7E-11 9.3E-16 109.6 9.2 99 48-152 155-254 (256)
16 2o9g_A Aquaporin Z; integral m 99.2 4E-11 1.4E-15 107.4 9.7 100 48-153 132-232 (234)
17 2b6o_A Aquaporin-0, lens fiber 99.2 8.8E-11 3E-15 106.9 11.3 101 49-154 126-226 (263)
18 3cn5_A Aquaporin; membrane pro 99.2 3.7E-11 1.3E-15 111.3 7.7 106 49-154 183-290 (304)
19 2w2e_A AQY1, aquaporin, aquapo 99.2 1.1E-10 3.8E-15 107.0 10.6 101 49-154 167-267 (279)
20 3d9s_A Aquaporin-5, AQP-5; aqu 99.2 1.1E-10 3.9E-15 106.2 10.2 101 49-154 128-229 (266)
21 2zz9_A Aquaporin-4; water tran 99.1 2.4E-10 8.3E-15 105.6 10.2 100 49-153 133-232 (301)
22 3iyz_A Aquaporin-4; water tran 99.1 2.6E-10 9E-15 106.5 9.9 101 49-154 172-272 (340)
23 3gd8_A Aquaporin-4; proton exc 99.1 4.6E-10 1.6E-14 99.8 10.3 98 49-151 124-221 (223)
24 1ldf_A Glycerol uptake facilit 99.1 6.4E-10 2.2E-14 102.2 10.5 102 49-154 144-258 (281)
25 1j4n_A Aquaporin 1; membrane p 99.0 6.3E-10 2.2E-14 101.7 9.2 99 51-154 138-236 (271)
26 3c02_A Aquaglyceroporin; membr 99.0 6.4E-10 2.2E-14 101.0 8.6 102 50-154 134-245 (258)
27 3kcu_A Probable formate transp 74.0 18 0.0006 32.6 9.5 107 86-198 70-182 (285)
28 4fc4_A Nitrite transporter NIR 68.9 14 0.00049 32.7 7.6 79 118-198 90-171 (261)
29 3kly_A Putative formate transp 59.7 42 0.0014 29.9 9.0 107 86-198 69-181 (280)
30 3tds_E Formate/nitrite transpo 52.7 29 0.001 30.8 6.6 80 117-198 95-177 (268)
31 3s2u_A UDP-N-acetylglucosamine 35.0 8.1 0.00028 35.5 -0.0 20 104-123 10-29 (365)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-51 Score=382.17 Aligned_cols=229 Identities=25% Similarity=0.484 Sum_probs=183.2
Q ss_pred cccccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC--CCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHH
Q 045670 40 IGFYEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSH--VSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFI 117 (319)
Q Consensus 40 ~~~~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 117 (319)
....+.++.++||++++||+|||+|+|++++++++..... ...+++.+++++|+++++.+++++++||||+|||||++
T Consensus 41 ~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTla 120 (340)
T 3iyz_A 41 VAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVA 120 (340)
T ss_pred hhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHH
Confidence 3456778889999999999999999999999887642111 12345678999999999999999999999999999999
Q ss_pred HHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHH
Q 045670 118 AALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVT 197 (319)
Q Consensus 118 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~ 197 (319)
+++.|+++|.+++.||++|++||++|+++++.++++.... ..+.+ .+.++.+..++|+.|+++||+|+++++.
T Consensus 121 l~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~--~lg~~-----~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila 193 (340)
T 3iyz_A 121 MVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG--GLGVT-----TVHGNLTAGHGLLVELIITFQLVFTIFA 193 (340)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcC--ceeec-----cCCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998765321 11211 1224678899999999999999999987
Q ss_pred hhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHH
Q 045670 198 IAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYY 277 (319)
Q Consensus 198 ~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~ 277 (319)
+. |+++....+ ..++.||++ +.++...+ .++||++||||||||||++.+ +|+++||||+||++|+++|+
T Consensus 194 ~~-d~~~~~~~~--~~pl~IGl~----v~i~~~~g--~~~TG~amNPARdlGPal~~~--~w~~~WVywvgPiiGailaa 262 (340)
T 3iyz_A 194 SC-DDKRTDVTG--SVALAIGFS----VAIGHLFA--INYTGASMNPARSFGPAVIMG--NWENHWIYWVGPIIGAVLAG 262 (340)
T ss_pred hh-cCccCCccc--chhhHHHHH----HHHHHHhc--cCCccccccHHHHHHHHHHcc--CCCcEeehhHHHHHHHHHHH
Confidence 64 444432222 223444444 43333332 468999999999999999987 79999999999999999999
Q ss_pred HHHhhcCCC
Q 045670 278 GFAKTLPEE 286 (319)
Q Consensus 278 l~~~~~~~~ 286 (319)
++|+++..+
T Consensus 263 llY~~l~~p 271 (340)
T 3iyz_A 263 ALYEYVFCP 271 (340)
T ss_pred HHHHHHhCC
Confidence 999988654
No 2
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3.7e-50 Score=373.09 Aligned_cols=246 Identities=28% Similarity=0.466 Sum_probs=184.0
Q ss_pred CcccccccchhhcccccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC---CCCcchHHHHHHHHHHHHHHHHHhc
Q 045670 28 GTITRREMFLACIGFYEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSH---VSEQKLLVPIAVFIIAFLFLMVTVP 104 (319)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~~~i~~~~~ 104 (319)
.+|.++++.++.++.+|+.+++++|++++||+|||+|+|++++++++..... ...+.+.+++++|++++++++++++
T Consensus 38 ~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~ 117 (304)
T 3cn5_A 38 GKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAG 117 (304)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeec
Confidence 3777787888888999999999999999999999999999999887654221 2233556899999999999999999
Q ss_pred cCCcccChHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHH
Q 045670 105 LSGGHMSPVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILE 184 (319)
Q Consensus 105 iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E 184 (319)
+||||+|||||+++++.|+++|.+++.||++|++|+++|+.+++.++++++... . ++. +...++.+..++++.|
T Consensus 118 iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~-~-~g~----~~~~~~~s~~~~f~~E 191 (304)
T 3cn5_A 118 ISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQF-G-GGA----NSVALGYNKGTALGAE 191 (304)
T ss_dssp TTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHT-T-TTC----CCCCTTCCHHHHHHHH
T ss_pred cCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-c-Ccc----cccCCCccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764322 1 111 1122467899999999
Q ss_pred HHHHHHHHHHHHHhhcccCcccccc--hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhC-CCCCCc
Q 045670 185 FTCTFVVLFVGVTIAFDKRRCKELG--LVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHG-GPLWKG 261 (319)
Q Consensus 185 ~~~TfiLv~~il~~~~d~~~~~~~~--~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~-~~~~~~ 261 (319)
+++||+|+++++. ..|+++..... ....++.||+++.+..+... ++||++||||||||||++.+ ...|++
T Consensus 192 ~i~TfiLv~~Il~-~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g------~~TG~amNPAR~~GPal~~~~~~~w~~ 264 (304)
T 3cn5_A 192 IIGTFVLVYTVFS-ATDPKRSARDSHVPILAPLPIGFAVFMVHLATI------PITGTGINPARSFGAAVIFNSNKVWDD 264 (304)
T ss_dssp HHHHHHHHHHHHH-TEEEEEESTTSCCEEECHHHHHHHHHHHHHHHH------HHHSCCCCHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhh-eecCccCCCCcccccchHHHHHHHHHHHHHhcc------CCCccccChHHHHHHHHHHccCCCcCc
Confidence 9999999999984 55644332111 11335556666665555433 46799999999999999943 247999
Q ss_pred ceehhhhHHHHHHHHHHHHhhcCCC
Q 045670 262 HWVFWVGPFLACVVYYGFAKTLPEE 286 (319)
Q Consensus 262 ~wvywvgP~~Gai~a~l~~~~~~~~ 286 (319)
+||||+||++|+++++++|+++..+
T Consensus 265 ~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 265 QWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred eEEEeehHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999998654
No 3
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=8.1e-49 Score=363.33 Aligned_cols=228 Identities=26% Similarity=0.494 Sum_probs=180.0
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC--CCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHH
Q 045670 41 GFYEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSH--VSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIA 118 (319)
Q Consensus 41 ~~~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 118 (319)
+.+|..+.++||++++||+|||+|+|++++++++..... .....+.+++++|+++++.+++++++||||+|||||+++
T Consensus 3 ~~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 82 (301)
T 2zz9_A 3 AFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAM 82 (301)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHH
Confidence 346777889999999999999999999999876543221 122345689999999999999999999999999999999
Q ss_pred HHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHh
Q 045670 119 ALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTI 198 (319)
Q Consensus 119 ~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~ 198 (319)
++.|+++|.+++.||++|++||++|+.+++.+++++... ..+.+ .+.++.+..++|+.|+++||+|+++++.+
T Consensus 83 ~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~--~~g~~-----~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~ 155 (301)
T 2zz9_A 83 VCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG--GLGVT-----TVHGNLTAGHGLLVELIITFQLVFTIFAS 155 (301)
T ss_dssp HHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGG--TSSCC-----CCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC--ceeee-----cCCcccchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999875422 12221 12246789999999999999999999865
Q ss_pred hcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHH
Q 045670 199 AFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYG 278 (319)
Q Consensus 199 ~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l 278 (319)
. |+++....+ ..++.||+.+++....+ .++||++|||||+||||++.+ .|.++||||+||++|++++++
T Consensus 156 ~-d~~~~~~~~--~~pl~IGl~v~i~~~~g------~~~TG~a~NPAR~~GPal~~~--~w~~~WVy~vgPiiGailaa~ 224 (301)
T 2zz9_A 156 C-DDKRTDVTG--SVALAIGFSVAIGHLFA------INYTGASMNPARSFGPAVIMG--NWENHWIYWVGPIIGAVLAGA 224 (301)
T ss_dssp S-CSSSSCCSS--CHHHHHHHHHHHHHHHH------HHHHCCCCCHHHHHHHHHHHC--CCTTTTHHHHHHHHHHHHHHH
T ss_pred c-CCCCCCccc--hHhHHHHHHHHHHHHHh------cCCcccccCcHHHHHHHHHhC--CCcceeeeeeHHHHHHHHHHH
Confidence 4 544433222 23455565554433332 246799999999999999987 799999999999999999999
Q ss_pred HHhhcCCC
Q 045670 279 FAKTLPEE 286 (319)
Q Consensus 279 ~~~~~~~~ 286 (319)
+|+++..+
T Consensus 225 ly~~l~~~ 232 (301)
T 2zz9_A 225 LYEYVFCP 232 (301)
T ss_dssp HHHTTTC-
T ss_pred HHHHHhCC
Confidence 99988653
No 4
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.5e-48 Score=356.82 Aligned_cols=224 Identities=29% Similarity=0.444 Sum_probs=179.1
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhc
Q 045670 43 YEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQG 122 (319)
Q Consensus 43 ~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 122 (319)
+|.++++++|++++||+|||+|+|+++++++.. .....+.+.+++++|+++++.+++++++||||+|||||+++++.|
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~--~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g 79 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGS 79 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhc
Confidence 466778899999999999999999999887532 112223456899999999999999999999999999999999999
Q ss_pred cccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhccc
Q 045670 123 IVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDK 202 (319)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~ 202 (319)
+++|.+++.|+++|++|+++|+.+++.+++++.... .+ .+.+.++++..++++.|+++||+|+++++.+ .|+
T Consensus 80 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~--~~-----~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~ 151 (263)
T 2b6o_A 80 QMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGN--LA-----LNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDE 151 (263)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSS--CS-----CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc--cc-----cccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 999999999999999999999999999997654221 12 1223356789999999999999999999876 555
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhh
Q 045670 203 RRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKT 282 (319)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~ 282 (319)
++....+ ..++.||+.+.+ ....+ .++||++||||||||||++.+ +|+|+||||+||++|+++++++|++
T Consensus 152 ~~~~~~~--~~pl~IGl~v~~----~~~~~--g~~TG~a~NPAR~~GPal~~~--~~~~~Wvy~vgP~~Ga~la~~~y~~ 221 (263)
T 2b6o_A 152 RRNGRLG--SVALAVGFSLTL----GHLFG--MYYTGAGMNPARSFAPAILTR--NFTNHWVYWVGPVIGAGLGSLLYDF 221 (263)
T ss_dssp TSCSSCC--CHHHHHHHHHHH----HHHHH--TTTSTTCCCHHHHHHHHHHHT--CCTTCTHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcc--cHHHHHHHHHHH----HHHhc--cCCCcccccHHHHHHHHHHcC--CccceeHHHHHHHHHHHHHHHHHHH
Confidence 4432222 234445544443 33322 468999999999999999987 8999999999999999999999998
Q ss_pred cCCC
Q 045670 283 LPEE 286 (319)
Q Consensus 283 ~~~~ 286 (319)
+..+
T Consensus 222 l~~~ 225 (263)
T 2b6o_A 222 LLFP 225 (263)
T ss_dssp TTSC
T ss_pred HhCC
Confidence 8654
No 5
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.9e-49 Score=351.15 Aligned_cols=219 Identities=26% Similarity=0.499 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccC--CCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDS--HVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTL 126 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 126 (319)
++||++++||+|||+|+|++++++++.... ....+...+++++|+++++.+++++++||||+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 679999999999999999999987754211 112345678999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCccc
Q 045670 127 ARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRCK 206 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~ 206 (319)
.+++.|+++|++|+++|+.+++.+++++... ..+.. .+.++.+..++++.|+++||+|+++++... |+++..
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~--~lg~~-----~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~-~~~~~~ 153 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVG--GLGVT-----MVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKRTD 153 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT--TTTCC-----CCCTTSCHHHHHHHHHHHHHHHHHHHHHHT-CTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccc--ceeec-----cCCCccCHHHHHHHHHHHHHHHHHHHHHHh-ccccCC
Confidence 9999999999999999999999998775432 12221 123467889999999999999999988754 544432
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHhhcCC
Q 045670 207 ELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 207 ~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~~~~~ 285 (319)
..+ ..++.||+.+++....+ .++||++||||||||||++.+ +|+++||||+||++|+++++++|+++..
T Consensus 154 ~~~--~~pl~iGl~v~~~~~~g------~~~TG~a~NPAR~~GP~l~~~--~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 154 VTG--SIALAIGFSVAIGHLFA------INYTGASMNPARSFGPAVIMG--NWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp CCS--CHHHHHHHHHHHHHHHH------HHHHCCCCCHHHHHHHHHHHT--CCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccC--CccHHHHHHHHHHHHhc------cCCccccccHHHHHHHHHHhc--CCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 222 23455555544333322 246799999999999999987 7999999999999999999999998864
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-48 Score=355.10 Aligned_cols=224 Identities=28% Similarity=0.415 Sum_probs=181.8
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhc
Q 045670 43 YEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQG 122 (319)
Q Consensus 43 ~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 122 (319)
+|+++++++|++++||+|||+|+|+++++++.. .......+.+++++|+++++.+++++++||||+|||||+++++.|
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~--~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g 81 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW--PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGN 81 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC--SSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTS
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhc
Confidence 466778999999999999999999999987532 222234567899999999999999999999999999999999999
Q ss_pred cccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhccc
Q 045670 123 IVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDK 202 (319)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~ 202 (319)
+++|.+++.||++|++|+++|+.+++.+++++... ..+. +.+.++.+..++++.|+++||+|+++++.+. |+
T Consensus 82 ~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~--~~g~-----~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~-d~ 153 (266)
T 3d9s_A 82 QISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG--NLAV-----NALNNNTTQGQAMVVELILTFQLALCIFAST-DS 153 (266)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT--TTTC-----CCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH-CT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccC--ceee-----ccCCccccHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 99999999999999999999999999999764321 1111 1122467889999999999999999998764 55
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCc-ceehhhhHHHHHHHHHHHHh
Q 045670 203 RRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKG-HWVFWVGPFLACVVYYGFAK 281 (319)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~-~wvywvgP~~Gai~a~l~~~ 281 (319)
++....+ ..|+.||+.+++..+.+. ++||++||||||||||++.+ .|++ +||||+||++|+++++++|+
T Consensus 154 ~~~~~~~--~~pl~IGl~v~~~~~~~g------~~TG~a~NPAR~~GPal~~~--~~~~~~Wvy~vgP~~Ga~la~~~y~ 223 (266)
T 3d9s_A 154 RRTSPVG--SPALSIGLSVTLGHLVGI------YFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILYF 223 (266)
T ss_dssp TCCSCCC--CHHHHHHHHHHHHHHHHH------HHHSCCSCHHHHHHHHHHHT--CCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccc--hHHHHHHHHHHHHHHHhh------ccccccccHHHHHHHHHHcC--CcccCEeeeehHHHHHHHHHHHHHH
Confidence 4432222 345566666555544432 46799999999999999987 8988 99999999999999999999
Q ss_pred hcCCC
Q 045670 282 TLPEE 286 (319)
Q Consensus 282 ~~~~~ 286 (319)
++..+
T Consensus 224 ~l~~~ 228 (266)
T 3d9s_A 224 YLLFP 228 (266)
T ss_dssp HTTSC
T ss_pred HHhCC
Confidence 98654
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=4.3e-48 Score=355.27 Aligned_cols=226 Identities=26% Similarity=0.462 Sum_probs=180.2
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhhhhhhccc----CCCC---CcchHHHHHHHHHHHHHHHHHhccCCcccChHHH
Q 045670 43 YEFFSPKMWRAAFTELVATAFLVFTLTTSIISCLD----SHVS---EQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFT 115 (319)
Q Consensus 43 ~~~~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~----~~~~---~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavT 115 (319)
+|+++++++|++++||+||++|+|++++++++... +... ...+.+++++|+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 46667889999999999999999999998776431 1111 2356789999999999999999999999999999
Q ss_pred HHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHH
Q 045670 116 FIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVG 195 (319)
Q Consensus 116 la~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~i 195 (319)
+++++.|+++|.+++.||++|++|+++|+.+++.++++.... ..+ .+.+.++++..++++.|+++||+|++++
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~--~~g-----~~~~~~~~~~~~~~~~E~i~T~~Lv~~i 155 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN--SLG-----LNALAPGVNSGQGLGIEIIGTLQLVLCV 155 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTC--CTT-----CCCCCTTCCTTGGGHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCccc--ccc-----cccCCCccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988643211 112 1223346778899999999999999998
Q ss_pred HHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHH
Q 045670 196 VTIAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVV 275 (319)
Q Consensus 196 l~~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~ 275 (319)
+.. .|+++....+ ..|+.||+.+.+....+. ++||++|||||||||+++++ .|+++||||+||++|+++
T Consensus 156 ~~~-~d~~~~~~~~--~~pl~IGl~v~~~~~~~~------~~TG~a~NPAR~~Gpal~~~--~~~~~wv~~vgP~~Ga~l 224 (271)
T 1j4n_A 156 LAT-TDRRRRDLGG--SGPLAIGFSVALGHLLAI------DYTGCGINPARSFGSSVITH--NFQDHWIFWVGPFIGAAL 224 (271)
T ss_dssp HHH-TCSSCCCCCS--CHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHTT--CCTTTTHHHHHHHHHHHH
T ss_pred Hhh-ccccCCCccc--cHHHHHHHHHHHHHHhcc------CCCccccChHHHHHHHHHhC--CCcceeHHHHHHHHHHHH
Confidence 865 4554432222 345556655554333322 36799999999999999986 799999999999999999
Q ss_pred HHHHHhhcCCC
Q 045670 276 YYGFAKTLPEE 286 (319)
Q Consensus 276 a~l~~~~~~~~ 286 (319)
++++|+++..+
T Consensus 225 a~~~y~~~~~~ 235 (271)
T 1j4n_A 225 AVLIYDFILAP 235 (271)
T ss_dssp HHHHHHTTTSC
T ss_pred HHHHHHHHhCC
Confidence 99999998654
No 8
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=5e-48 Score=356.88 Aligned_cols=228 Identities=14% Similarity=0.133 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLA 127 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (319)
++++|++++||+|||+|+|++++++++...++...+.+.+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 46789999999999999999999877654443333445689999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhcccchhhhcc--------------CcceeecCCCCCCCcChhHHHHHHHHHHHHHHH
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSHNAARRYS--------------LGGCLIAGNGTSAGISAETALILEFTCTFVVLF 193 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~--------------~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~ 193 (319)
+++.||++|++|+++|+.+++.+++++..+... .+.+...| .++++..++|+.|+++||+|++
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p---~~~~s~~~~~~~E~i~Tf~Lv~ 161 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYP---NPHINFVQAFAVEMVITAILMG 161 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCC---CTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccC---CccccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876432210 01111111 2357899999999999999999
Q ss_pred HHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhC-----C------CCCCcc
Q 045670 194 VGVTIAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHG-----G------PLWKGH 262 (319)
Q Consensus 194 ~il~~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~-----~------~~~~~~ 262 (319)
+++.+. |+++... .....++.||+.+....+... ++||++||||||||||++.. . .+|.|+
T Consensus 162 ~il~~~-d~~~~~~-~~~~~pl~IGl~v~~~~~~~g------~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~ 233 (281)
T 1ldf_A 162 LILALT-DDGNGVP-RGPLAPLLIGLLIAVIGASMG------PLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYF 233 (281)
T ss_dssp HHHHHH-CTTSSSC-CGGGHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTT
T ss_pred HHHHHh-ccCCCCc-ccchHHHHHHHHHHHHHHhcc------cccccccCcHhhHHHHHHHHhcccccccccccCCCcee
Confidence 998764 5444321 112345556666555444332 46799999999999999971 1 123389
Q ss_pred eehhhhHHHHHHHHHHHHhhcCCC
Q 045670 263 WVFWVGPFLACVVYYGFAKTLPEE 286 (319)
Q Consensus 263 wvywvgP~~Gai~a~l~~~~~~~~ 286 (319)
||||+||++|+++++++|+++..+
T Consensus 234 WVy~vgPi~Ga~la~~~y~~l~~~ 257 (281)
T 1ldf_A 234 LVPLFGPIVGAIVGAFAYRKLIGR 257 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred eHHhHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999998654
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.7e-48 Score=351.59 Aligned_cols=224 Identities=24% Similarity=0.261 Sum_probs=174.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-CCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccc
Q 045670 46 FSPKMWRAAFTELVATAFLVFTLTTSIISCLDSH-VSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIV 124 (319)
Q Consensus 46 ~~~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 124 (319)
.+++++|++++||+|||+|+|++|++++...... ...+++.+++++|+++++.+++++++||||+|||||+++++.|++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 104 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRF 104 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCC
Confidence 3567899999999999999999999875443222 223456689999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHhhcccchh-hh---ccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhc
Q 045670 125 TLARAATYVLAQCLGSIVGFLIINSVMSHNAA-RR---YSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAF 200 (319)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~~---~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~ 200 (319)
+|.+++.||++|++|+++|+.+++.++++... +. ...+.....| ...+..++++.|+++||+|+++++.+ .
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p----~~~s~~~~f~~E~i~Tf~Lv~~il~~-~ 179 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSP----GGYSLVSALLIEIILTAFFLIVILGS-T 179 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGST----TCCCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCC----cccCHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 99999999999999999999999998754211 10 0011111111 24688999999999999999998764 5
Q ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHH
Q 045670 201 DKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFA 280 (319)
Q Consensus 201 d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~ 280 (319)
|+++... ..|+.||+++.+..+... ++||++||||||||||++.+...|+++||||+||++|+++++++|
T Consensus 180 d~~~~~~----~~pl~IGl~v~~i~~~~g------~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y 249 (256)
T 3llq_A 180 HGRVPAG----FAPIAIGLALTLIHLISI------PVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIW 249 (256)
T ss_dssp STTSCTT----CHHHHHHHHHHHHHHHHH------HHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcc----chhHHHHHHHHHHHHHhc------cccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHH
Confidence 6554322 345566666655554432 467999999999999999875557799999999999999999999
Q ss_pred hhcC
Q 045670 281 KTLP 284 (319)
Q Consensus 281 ~~~~ 284 (319)
+++.
T Consensus 250 ~~l~ 253 (256)
T 3llq_A 250 KLFG 253 (256)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
No 10
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2.3e-47 Score=351.23 Aligned_cols=218 Identities=22% Similarity=0.324 Sum_probs=173.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhh-cccC-----CC-CCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHH
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIIS-CLDS-----HV-SEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAAL 120 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~-~~~~-----~~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 120 (319)
++.+|++++||+|||+|+|++++++.. .... .. ....+.+++++|+++++.+++++++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 477899999999999999999886422 2111 11 1124568999999999999999999999999999999999
Q ss_pred hccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhc
Q 045670 121 QGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAF 200 (319)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~ 200 (319)
.|+++|.+++.||++|++|+++|+++++.++++... +... ..++.+..++++.|+++||+|+++++....
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~-------~~t~---~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~ 191 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA-------FANA---LGGGASRTRGLFLEAFGTAILCLTVLMLAV 191 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC-------CSCC---CCTTCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce-------eecc---CCccccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999876531 1111 123578899999999999999999987765
Q ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHH
Q 045670 201 DKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFA 280 (319)
Q Consensus 201 d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~ 280 (319)
++++.. ...++.||+.+.+..+... ++||++||||||||||++.+ ..|+|+||||+||++|+++++++|
T Consensus 192 ~~~~~~----~~~pl~IGl~v~~~~l~~g------~~TG~s~NPAR~~GPal~~~-~~~~~~WVy~vgPiiGa~la~~ly 260 (279)
T 2w2e_A 192 EKHRAT----WFAPFVIGIALLIAHLICI------YYTGAGLNPARSFGPAVAAR-SFPNYHWIYWLGPILGAFLAYSIW 260 (279)
T ss_dssp SCSTTG----GGHHHHHHHHHHHHHHHHH------HHHCCCCSHHHHHHHHHHHT-CCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCc----CcHHHHHHHHHHHHHHhcc------cccccccChHHHHHHHHHhc-cchhhhhHHHHHHHHHHHHHHHHH
Confidence 554321 2345556665555444332 46799999999999999986 245799999999999999999999
Q ss_pred hhcCCC
Q 045670 281 KTLPEE 286 (319)
Q Consensus 281 ~~~~~~ 286 (319)
+++...
T Consensus 261 ~~l~~~ 266 (279)
T 2w2e_A 261 QMWKWL 266 (279)
T ss_dssp HHHHHT
T ss_pred HHHHcc
Confidence 988543
No 11
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=4.5e-47 Score=341.88 Aligned_cols=223 Identities=25% Similarity=0.279 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-CCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSH-VSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLA 127 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (319)
+++|++++||+|||+|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAK 82 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHH
Confidence 4689999999999999999998875432221 122456689999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhcccch--hhh----ccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcc
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSHNA--ARR----YSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFD 201 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~----~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d 201 (319)
+++.|+++|++|+++|+.+++.++++.. ... ...+.+...| .+.+..++++.|+++||+|+++++.. .|
T Consensus 83 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p----~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d 157 (234)
T 2o9g_A 83 EVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP----GGYSMLSALVVELVLSAGFLLVIHGA-TD 157 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGST----TCCCHHHHHHHHHHHHHHHHHHHHHH-TS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCC----CccchHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 9999999999999999999999887532 110 0111111122 24688999999999999999998865 45
Q ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHhCCCCCCcceehhhhHHHHHHHHHHHHh
Q 045670 202 KRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLHGGPLWKGHWVFWVGPFLACVVYYGFAK 281 (319)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~~~~~~~~~wvywvgP~~Gai~a~l~~~ 281 (319)
+++.+ + ..|+.||+.+....+... ++||++||||||||||++.++..|+|+||||+||++|+++++++|+
T Consensus 158 ~~~~~--~--~~pl~IGl~v~~~~~~~g------~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~ 227 (234)
T 2o9g_A 158 KFAPA--G--FAPIAIGLACTLIHLISI------PVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYR 227 (234)
T ss_dssp TTSCT--T--CHHHHHHHHHHHHHHHHH------HHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcc--c--hHHHHHHHHHHHHHHHcc------CCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHH
Confidence 54322 2 345566666665555433 4678999999999999999855677999999999999999999999
Q ss_pred hcCCC
Q 045670 282 TLPEE 286 (319)
Q Consensus 282 ~~~~~ 286 (319)
++..+
T Consensus 228 ~~~~~ 232 (234)
T 2o9g_A 228 TLLEK 232 (234)
T ss_dssp HHTSC
T ss_pred HHcCC
Confidence 98653
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=6e-47 Score=345.70 Aligned_cols=229 Identities=21% Similarity=0.241 Sum_probs=176.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhcccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLA 127 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (319)
++++|++++||+|||+|+|++++++++...+....+.+.+++++|+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 46789999999999999999999876654332233456789999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHhhcccCcccc
Q 045670 128 RAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVVLFVGVTIAFDKRRCKE 207 (319)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~~~d~~~~~~ 207 (319)
+++.|+++|++|+++|+.+++.+++++..+....+. ....+...+.+..++++.|+++||+|+++++.+. |+++...
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~--~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~-d~~~~~~ 163 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQF--AWETSRNPSISLTGAFFNELILTGILLLVILVVV-DENICGK 163 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTT--CSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH-CHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhhhhcccccc--ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHh-CcccCCc
Confidence 999999999999999999999999876543221110 0111111235566799999999999999998764 5443211
Q ss_pred cchHHH-HHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHHHh----CCCCC----CcceehhhhHHHHHHHHHH
Q 045670 208 LGLVVV-CAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPALLH----GGPLW----KGHWVFWVGPFLACVVYYG 278 (319)
Q Consensus 208 ~~~~~~-~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al~~----~~~~~----~~~wvywvgP~~Gai~a~l 278 (319)
..... |+.||+.+....+... ++||++||||||||||++. +...| +|+||||+||++|++++++
T Consensus 164 -~~~~~~pl~IGl~v~~~~~~~g------~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~ 236 (258)
T 3c02_A 164 -FHILKLSSVVGLIILCIGITFG------GNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQ 236 (258)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHHHHHHhcc------CccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHH
Confidence 12234 5555655555444332 4679999999999999997 33334 6799999999999999999
Q ss_pred HHhhcCCC
Q 045670 279 FAKTLPEE 286 (319)
Q Consensus 279 ~~~~~~~~ 286 (319)
+|+++..+
T Consensus 237 ~y~~~~~~ 244 (258)
T 3c02_A 237 FYDKVICP 244 (258)
T ss_dssp HHHHTHHH
T ss_pred HHHHHhcc
Confidence 99998653
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=3.6e-45 Score=332.01 Aligned_cols=222 Identities=24% Similarity=0.248 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc-cCC----------------CCCcchHHHHHHHHHHHHHHHHHhccCCcccC
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCL-DSH----------------VSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMS 111 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~-~~~----------------~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~N 111 (319)
+++|++++||+|||+|+|+++++++... ... ....++.+++++|+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4689999999999999999999877643 111 00112448999999999999999999999999
Q ss_pred hHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccchhhhccCcceeecCCCCCCCcChhHHHHHHHHHHHHH
Q 045670 112 PVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHNAARRYSLGGCLIAGNGTSAGISAETALILEFTCTFVV 191 (319)
Q Consensus 112 PavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~s~~~~~~~E~~~TfiL 191 (319)
||||+++++.|+++|.+++.|+++|++|+++|+.+++.+++++.... .+.....| .++.+..++++.|+++||+|
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~--~~~~~t~p---~~~~~~~~~~~~E~i~Tf~L 157 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATV--GGLGATAP---FPGISYWQAMLAEVVGTFLL 157 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHT--TGGGCCCC---CTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhc--ceeeeccC---ccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998743221 12211222 23678899999999999999
Q ss_pred HHHHHHhhcccCcccccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccchhhHHHHH--Hh--CCCCCCcceehhh
Q 045670 192 LFVGVTIAFDKRRCKELGLVVVCAIVAGAMAIAVFVSITVTQKPGYAGVGLNPARCLGPAL--LH--GGPLWKGHWVFWV 267 (319)
Q Consensus 192 v~~il~~~~d~~~~~~~~~~~~~~~i~~~ig~~v~~~~~~~~~~~~tG~~~NPAr~lg~al--~~--~~~~~~~~wvywv 267 (319)
+++++....|+++.. ...++.+|+.+....+... ++||+++||||||||++ .. +..+|.|+|+||+
T Consensus 158 v~~i~~~~~~~~~~~----~~~pl~iGl~v~~~~~~~g------~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~v 227 (246)
T 2f2b_A 158 MITIMGIAVDERAPK----GFAGIIIGLTVAGIITTLG------NISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVI 227 (246)
T ss_dssp HHHHHHHTTSTTSCT----TCHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHH
T ss_pred HheeeEEecCCCCCC----ceeeHHHHHHHHHHHhccc------ccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeee
Confidence 999987666654431 2335556666555555432 46799999999999999 33 3468999999999
Q ss_pred hHHHHHHHHHHHHhhcCC
Q 045670 268 GPFLACVVYYGFAKTLPE 285 (319)
Q Consensus 268 gP~~Gai~a~l~~~~~~~ 285 (319)
+|++|+++++++|+++..
T Consensus 228 ap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 228 GPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999998754
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.51 E-value=5.2e-14 Score=127.22 Aligned_cols=100 Identities=21% Similarity=0.286 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHH-----hc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAAL-----QG 122 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l-----~g 122 (319)
.+.++.++.|+++||+|+++.++..... +.+....++.+|+.++...+..+++||+|+|||+|++..+ -+
T Consensus 141 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~-----~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~ 215 (246)
T 2f2b_A 141 ISYWQAMLAEVVGTFLLMITIMGIAVDE-----RAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAG 215 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTST-----TSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHHHHheeeEEecCC-----CCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCC
Confidence 4678999999999999999877643211 1123357899999999999999999999999999999887 34
Q ss_pred cccccchhhhhhhhhhHHHHHHHHHHhhcc
Q 045670 123 IVTLARAATYVLAQCLGSIVGFLIINSVMS 152 (319)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (319)
+..|.+.++||++|++|+++|+++++.+++
T Consensus 216 ~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 216 TDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp CCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 567888999999999999999999887754
No 15
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=2.7e-11 Score=109.58 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHh-ccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQ-GIVTL 126 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~-g~~~~ 126 (319)
.+.++.++.|+++||+|+++.++.. + .+.+....++.+|+.+++..+..++.||+.+|||++++..+. |...|
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~----d--~~~~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~ 228 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGST----H--GRVPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWAL 228 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH----S--TTSCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhc----C--CCCCccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcc
Confidence 3678999999999999999776432 1 112223568899999999999999999999999999998864 55567
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhhcc
Q 045670 127 ARAATYVLAQCLGSIVGFLIINSVMS 152 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (319)
...|+||++|++|+++|+++++.+.+
T Consensus 229 ~~~WVy~vgPi~Ga~la~~~y~~l~~ 254 (256)
T 3llq_A 229 QQLWLFWLAPIVGGAAGAVIWKLFGE 254 (256)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cceeeeeeHHHHHHHHHHHHHHHhcc
Confidence 78999999999999999999888753
No 16
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.21 E-value=4e-11 Score=107.38 Aligned_cols=100 Identities=21% Similarity=0.310 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHh-ccccc
Q 045670 48 PKMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQ-GIVTL 126 (319)
Q Consensus 48 ~~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~-g~~~~ 126 (319)
.+.++.++.|+++||+|+++.++.. + .+.+....++.+|+.+....+..++.||+.+|||++++..+. |...|
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~----d--~~~~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~ 205 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGAT----D--KFAPAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWAL 205 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHT----S--TTSCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc----C--CCCccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCC
Confidence 3678999999999999999776532 1 112233578899999999999999999999999999998775 55577
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 127 ARAATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
...|+||++|++|+++|+++++.++.+
T Consensus 206 ~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 206 EQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 799999999999999999999887654
No 17
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.19 E-value=8.8e-11 Score=106.90 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+..+.++.|+++||+|+++.++.. +..........++.+|+.+++..+..++.||+.+|||++++..+... .|..
T Consensus 126 s~~~~~~~E~i~Tf~Lv~~il~~~----d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 200 (263)
T 2b6o_A 126 SVGQATIVEIFLTLQFVLCIFATY----DERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTN 200 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHS----CTTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh----cccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-Cccc
Confidence 457899999999999999876542 11111122346888999999988999999999999999999888655 7889
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
.|+||+++++|+++|+++++.++.++
T Consensus 201 ~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 201 HWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999998876543
No 18
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.17 E-value=3.7e-11 Score=111.26 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHh--ccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQ--GIVTL 126 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~--g~~~~ 126 (319)
+.++.++.|+++||+|+++.+...-..............++.+|+.+++..+..++.||+.+|||++++..+. +...|
T Consensus 183 s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w 262 (304)
T 3cn5_A 183 NKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVW 262 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCc
Confidence 5678999999999999998763321110000000112568899999999999999999999999999998876 34578
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 127 ARAATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
...|+||++|++|+++|+++++.++.++
T Consensus 263 ~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 263 DDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998877654
No 19
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.16 E-value=1.1e-10 Score=106.96 Aligned_cols=101 Identities=19% Similarity=0.227 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+.++.++.|+++||+|+++.++.... .+.+....++.+|+.+++..+..++.||+.+|||++++..+....-+..
T Consensus 167 s~~~~~~~E~i~Tf~Lv~~Il~~~~~-----~~~~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~ 241 (279)
T 2w2e_A 167 SRTRGLFLEAFGTAILCLTVLMLAVE-----KHRATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNY 241 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTS-----CSTTGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccC-----CCCCcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhh
Confidence 56789999999999999987654311 1112345788999999999999999999999999999998876544457
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
.|+||++|++|+++|+++++.+...+
T Consensus 242 ~WVy~vgPiiGa~la~~ly~~l~~~~ 267 (279)
T 2w2e_A 242 HWIYWLGPILGAFLAYSIWQMWKWLN 267 (279)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 89999999999999999998876544
No 20
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.15 E-value=1.1e-10 Score=106.23 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+.++.++.|+++||+|+++.++.. +.....+....++.+|+.+.+..+..++.||+.+|||++++..+... .|..
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~----d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 202 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFAST----DSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSP 202 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH----CTTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh----cccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-Cccc
Confidence 567899999999999999877542 11111122346888888888888888899999999999999888654 7888
Q ss_pred -hhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 129 -AATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 129 -~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
.|+||++|++|+++|+++++.++.++
T Consensus 203 ~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 203 AHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998876543
No 21
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.11 E-value=2.4e-10 Score=105.61 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+.++.++.|+++||+|+++.++.. +..........++.+|+.+.+.....++.||+.+|||++++..+... .|..
T Consensus 133 s~~~~f~~E~i~Tf~Lv~~Il~~~----d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~~ 207 (301)
T 2zz9_A 133 TAGHGLLVELIITFQLVFTIFASC----DDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 207 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHS----CSSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc----CCCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCcc
Confidence 567899999999999999876532 11111112346788888887777777789999999999999888754 7999
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhccc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMSH 153 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (319)
.|+||++|++|+++|++++..++.+
T Consensus 208 ~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 208 HWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred eeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999887754
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.09 E-value=2.6e-10 Score=106.48 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+..+.++.|+++||+|+++.++..- ..........++++|+.+.+.....++.||+.+|||++++..+... .|..
T Consensus 172 s~~~~f~~E~i~Tf~Lv~~Ila~~d----~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~ 246 (340)
T 3iyz_A 172 TAGHGLLVELIITFQLVFTIFASCD----DKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 246 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhc----CccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCc
Confidence 5678999999999999998765421 1111112235788888887777677789999999999999888754 6889
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
.|+||+++++|+++|++++..++.++
T Consensus 247 ~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 247 HWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred EeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998877544
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.08 E-value=4.6e-10 Score=99.77 Aligned_cols=98 Identities=19% Similarity=0.210 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccc
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLAR 128 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (319)
+..+.++.|+++||+|++..+... +..........++.+|+.+.+.....++.||+.+|||++++..+... .|..
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~----~~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~ 198 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASC----DSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 198 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHT----CTTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHh----ccccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCc
Confidence 567899999999999999776532 11111112235788888777666666789999999999999888654 6899
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhc
Q 045670 129 AATYVLAQCLGSIVGFLIINSVM 151 (319)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~ 151 (319)
.|+||+++++|+++|+++++.++
T Consensus 199 ~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 199 HWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHc
Confidence 99999999999999999988765
No 24
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.05 E-value=6.4e-10 Score=102.18 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCC-cchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhc-----
Q 045670 49 KMWRAAFTELVATAFLVFTLTTSIISCLDSHVSE-QKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQG----- 122 (319)
Q Consensus 49 ~~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g----- 122 (319)
+.++.++.|+++||+|+++.++.. +..... .....++.+|+.++...+..++.||+.+|||++++..+..
T Consensus 144 s~~~~~~~E~i~Tf~Lv~~il~~~----d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~ 219 (281)
T 1ldf_A 144 NFVQAFAVEMVITAILMGLILALT----DDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGW 219 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH----CTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh----ccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhccc
Confidence 678999999999999999876542 111111 1345789999999999999999999999999999977643
Q ss_pred -ccccc------chhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 123 -IVTLA------RAATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 123 -~~~~~------~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
...|. ..|+||+++++|+++|+++++.++..+
T Consensus 220 g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 220 GNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp TTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred ccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 22333 689999999999999999998887654
No 25
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.03 E-value=6.3e-10 Score=101.66 Aligned_cols=99 Identities=14% Similarity=0.194 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhccccccchh
Q 045670 51 WRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLVPIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQGIVTLARAA 130 (319)
Q Consensus 51 ~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 130 (319)
.+.++.|+++||+|+++.++.. +..........++.+|+.+.+.....++.||+.+|||++++..+... .|...|
T Consensus 138 ~~~~~~E~i~T~~Lv~~i~~~~----d~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~w 212 (271)
T 1j4n_A 138 GQGLGIEIIGTLQLVLCVLATT----DRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDHW 212 (271)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHT----CSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhc----cccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCccee
Confidence 5678899999999999776432 11111122346888888888777777789999999999999887654 788999
Q ss_pred hhhhhhhhHHHHHHHHHHhhcccc
Q 045670 131 TYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 131 ~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
+||+++++|+++|+++++.++.++
T Consensus 213 v~~vgP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 213 IFWVGPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999998876643
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.01 E-value=6.4e-10 Score=100.98 Aligned_cols=102 Identities=18% Similarity=0.154 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchHH-HHHHHHHHHHHHHHHhccCCcccChHHHHHHHHhc-----c
Q 045670 50 MWRAAFTELVATAFLVFTLTTSIISCLDSHVSEQKLLV-PIAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALQG-----I 123 (319)
Q Consensus 50 ~~r~~~aEfigTf~lvf~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g-----~ 123 (319)
..+.++.|+++||+|+++.++..-.. + ...+.... ++.+|+.+....+..++.||+.+|||++++..+.. .
T Consensus 134 ~~~~~~~E~i~Tf~Lv~~i~~~~d~~--~-~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~ 210 (258)
T 3c02_A 134 LTGAFFNELILTGILLLVILVVVDEN--I-CGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGK 210 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHH--H-HCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCcc--c-CCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccc
Confidence 44699999999999999877543110 0 00122345 89999999999999999999999999999987753 2
Q ss_pred ccc----cchhhhhhhhhhHHHHHHHHHHhhcccc
Q 045670 124 VTL----ARAATYVLAQCLGSIVGFLIINSVMSHN 154 (319)
Q Consensus 124 ~~~----~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (319)
..| ...|+||++|++|+++|+++++.++..+
T Consensus 211 ~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~ 245 (258)
T 3c02_A 211 DTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL 245 (258)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence 345 4489999999999999999998877654
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=74.03 E-value=18 Score=32.58 Aligned_cols=107 Identities=17% Similarity=0.144 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCcccChHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcc--cchhhhc-cC
Q 045670 86 LVPIAVFIIAFLFLMVTVPL-SGGHMSPVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMS--HNAARRY-SL 161 (319)
Q Consensus 86 ~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~-~~ 161 (319)
..++.+.+.+.+.++.-... +| |--.+ ...+.+|.+|.+.+--|.-=.+|=++|++++-.++. ....... ..
T Consensus 70 l~g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~ 145 (285)
T 3kcu_A 70 VGGICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQW 145 (285)
T ss_dssp HHHHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHH
T ss_pred HHHHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHH
Confidence 34555555555544444433 33 42222 335678899888776666555665555555543321 1100000 00
Q ss_pred cce--eecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHh
Q 045670 162 GGC--LIAGNGTSAGISAETALILEFTCTFVVLFVGVTI 198 (319)
Q Consensus 162 g~~--~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~ 198 (319)
+.. .+... ..+.++.+.|+-=.+|.++..+.++..
T Consensus 146 ~~~~~~ia~~--K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 146 GLNVLQTADH--KVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHH--TTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01111 134678888888889999888877654
No 28
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=68.86 E-value=14 Score=32.75 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=41.8
Q ss_pred HHHhccccccchhhhhhhhhhHHHHHHHHHHhhcccc-hhhhccCcce--eecCCCCCCCcChhHHHHHHHHHHHHHHHH
Q 045670 118 AALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSHN-AARRYSLGGC--LIAGNGTSAGISAETALILEFTCTFVVLFV 194 (319)
Q Consensus 118 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-~~~~~~~g~~--~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~ 194 (319)
..+.+|.+|.+.+--|.-=.+|=++|++++-.++... .......+.. .+... ..+.++.+.|+-=.+|.++..+.
T Consensus 90 ~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~~~~ia~~--K~~~~~~~~f~~gIlcN~lVcla 167 (261)
T 4fc4_A 90 GVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALA--KTTAPATVLFFKGALCNWLVCLA 167 (261)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSHHHHHHHH--HHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHHHHHHHHH--HhcCcHHHHHHHHHHHHHHHHHH
Confidence 4456889998888777655566555555543332211 0000000000 00000 12346678888888888887777
Q ss_pred HHHh
Q 045670 195 GVTI 198 (319)
Q Consensus 195 il~~ 198 (319)
++..
T Consensus 168 Vw~~ 171 (261)
T 4fc4_A 168 IWMA 171 (261)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 29
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=59.66 E-value=42 Score=29.94 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCcccChHHHHHHHHhccccccchhhhhhhhhhHHHHHHHHHHhhcc--cchhh-hccC
Q 045670 86 LVPIAVFIIAFLFLMVTVPL-SGGHMSPVFTFIAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMS--HNAAR-RYSL 161 (319)
Q Consensus 86 ~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~--~~~~~-~~~~ 161 (319)
..++.+.+.+.+.++.-... +|--+ .+ ...+.+|++|.+.+--|.-=.+|=++|++++-.++. ..... ....
T Consensus 69 l~g~~F~vGL~lVvl~g~ELFTgn~l---~~-~~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~ 144 (280)
T 3kly_A 69 LGGLAFSLGLILVVITGGELFTSSVL---IL-VAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQL 144 (280)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTTCC---CC-SSSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHH
T ss_pred HHHHHHHHHHHHHHHccccccccchH---HH-HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHH
Confidence 34555555555555444433 43222 22 234578899998887776666666666665544321 10000 0000
Q ss_pred cce--eecCCCCCCCcChhHHHHHHHHHHHHHHHHHHHh
Q 045670 162 GGC--LIAGNGTSAGISAETALILEFTCTFVVLFVGVTI 198 (319)
Q Consensus 162 g~~--~~~~~~~~~~~s~~~~~~~E~~~TfiLv~~il~~ 198 (319)
+.. .+... ..+.++.+.|+-=.+|.++..+.++..
T Consensus 145 ~~~~~~ia~~--K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 145 GLNAMAISQH--KLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01111 135678888988889999888877654
No 30
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=52.74 E-value=29 Score=30.83 Aligned_cols=80 Identities=11% Similarity=0.182 Sum_probs=44.1
Q ss_pred HHHHhccccccchhhhhhhhhhHHHHHHHHHHhhccc-chhhhccCcce--eecCCCCCCCcChhHHHHHHHHHHHHHHH
Q 045670 117 IAALQGIVTLARAATYVLAQCLGSIVGFLIINSVMSH-NAARRYSLGGC--LIAGNGTSAGISAETALILEFTCTFVVLF 193 (319)
Q Consensus 117 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~-~~~~~~~~g~~--~~~~~~~~~~~s~~~~~~~E~~~TfiLv~ 193 (319)
...+.++.+|.+.+--|.-=.+|=++|+++.-.++.. ...+....+.. .+... ..+.++.+.|+-=.+|.++..+
T Consensus 95 ~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~~~~ia~~--K~~~~~~~~f~~gIlcN~lVcl 172 (268)
T 3tds_E 95 AGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEFFANTAAS--KASMPFTALFFRGILCNILVCV 172 (268)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHHHHHHHHH--HHSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHHHH
Confidence 3457788999888777766666666666555443311 11000000000 00000 1245678888888888888888
Q ss_pred HHHHh
Q 045670 194 VGVTI 198 (319)
Q Consensus 194 ~il~~ 198 (319)
.++..
T Consensus 173 aVw~~ 177 (268)
T 3tds_E 173 SVLCS 177 (268)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77643
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=34.98 E-value=8.1 Score=35.46 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=16.4
Q ss_pred ccCCcccChHHHHHHHHhcc
Q 045670 104 PLSGGHMSPVFTFIAALQGI 123 (319)
Q Consensus 104 ~iSGah~NPavTla~~l~g~ 123 (319)
.=||||++||++++-.+..+
T Consensus 10 GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 34789999999999888654
Done!