BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045671
(628 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/649 (61%), Positives = 482/649 (74%), Gaps = 42/649 (6%)
Query: 5 TIRKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYSRG 64
++RKAIG VKDQTSI +AKVA N+APDLEV +VKATSHDD+ + DKY+REI+SL S SRG
Sbjct: 4 SMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTSLSRG 63
Query: 65 YVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDF 124
YV AC+ ++S+RL KT DWIVA+KALMLVH+LL +G LF++EI+Y+TRRG R+LNMSDF
Sbjct: 64 YVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMSDF 123
Query: 125 RDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKV-------EEREDRFRDDF 177
RDEAHS+SWDH FVR YA YLD+++E ++E++ R G G ++ +R RDDF
Sbjct: 124 RDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSRDDF 183
Query: 178 DR--------------GMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLR 223
GM RS+S+GDV+E REE++ TP+REM PER+ ++ L R
Sbjct: 184 RSPPPRTYDYETGNGFGMPKRSRSFGDVNEIGAREEKKSVTPLREMTPERIFGKMGHLQR 243
Query: 224 ILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRG 283
+LD+ L+CRPTG AKNSR++L+A+Y VVK+SF LY DICE L VLLDKF +MEY DCV+
Sbjct: 244 LLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDCVKA 303
Query: 284 FEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKEMANRPKNP 343
F+AY SAAK IDEL+ FY WCKD G+ARSSE+PEVQRIT KLL TL+ F+++ A R K+P
Sbjct: 304 FDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRAKSP 363
Query: 344 ER---IREEKLPPKQEPEPDMNEVKALPAPENSSPPPPPPPKPQQPPKPQPQQVTDDLVN 400
ER P E DMNE+KALP PEN + PPP P PKPQ QVTDDLVN
Sbjct: 364 ERKEIEAPPAPAPPVEEPVDMNEIKALPPPENHT----PPPPPAPEPKPQQPQVTDDLVN 419
Query: 401 LKDDATSADEQGNKLALALFSGPPTNTNGSWEAFPSNGQPEVTSAWQTPAAESGRADWES 460
L++D S D+QGNK ALALF+GPP N NG WEAF S+ VTSAWQ PAAE G+ADWE
Sbjct: 420 LREDDVSGDDQGNKFALALFAGPPAN-NGKWEAFSSDNN--VTSAWQNPAAELGKADWEL 476
Query: 461 ALVETAGNLSKQKAAYAGGFDSLVLNGMYDQGAVRQHVSTTQLSGGSASSVTLPGPGKSA 520
ALVETA NL QKAA GG D L+LNGMYDQGAVRQHVST++L+GGS+SSV LP PGK
Sbjct: 477 ALVETASNLEHQKAAMGGGLDPLLLNGMYDQGAVRQHVSTSELTGGSSSSVALPLPGKVN 536
Query: 521 TPVLALPAPDGTVQTVGNNDPFAASLTVPPPSYVQMAEMERKQQFLVQEQQLWQQYGRDG 580
+ +LALPAPDGTVQ V N DPFAASLT+PPPSYVQMAEM++KQ L QEQQLWQQY ++G
Sbjct: 537 SHILALPAPDGTVQKV-NQDPFAASLTIPPPSYVQMAEMDKKQYLLTQEQQLWQQYQQEG 595
Query: 581 MQGQVALAKIAGGSGYYGPNPQSMMPYGMPQVTGMGQPGPGGYYY-SPY 628
M+GQ +LAK+ Q+ MPYGMP V GMG P P GYYY +PY
Sbjct: 596 MRGQASLAKMN--------TAQTAMPYGMPPVNGMG-PSPMGYYYNNPY 635
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/672 (59%), Positives = 492/672 (73%), Gaps = 63/672 (9%)
Query: 1 MAPSTIRKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMS 60
MAPS IRKAIGAVKDQTSI +AKVA N+APDLEV +VKATSHDD+PA +KY+REI++L S
Sbjct: 1 MAPS-IRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLTS 59
Query: 61 YSRGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLN 120
SRGY+ AC+ ++S+RLSKT DW+VA+KALMLVH+LL +G +F++EI+YSTRRG R+LN
Sbjct: 60 LSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLN 119
Query: 121 MSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKM-----RGG----EGKVEERED 171
MSDFRDEAHS+SWDH FVR YA YLD+++E ++E+K GG ++R
Sbjct: 120 MSDFRDEAHSSSWDHSAFVRTYAGYLDQRLELALFERKSGVSVNSGGNSSHHSNNDDRYG 179
Query: 172 RFRDDFDR--------------------------GMELRSQSYGDVSE------SVRREE 199
R RDDF G+ RS+SYGD++E R+E
Sbjct: 180 RGRDDFRSPPPRSYDYENGGGGGSDFRGDNNGYGGVPKRSRSYGDMTEMGGGGGGGGRDE 239
Query: 200 RREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYV 259
++ TP+REM PER+ ++ L R+LD+ L+ RPTG AKNSR++L+ALY VV++SF LY
Sbjct: 240 KKVVTPLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYA 299
Query: 260 DICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQ 319
DICE L VLLDKF +MEY+DCV+ F+AY SAAK IDEL+ FY WCK+ G+ARSSE+PEVQ
Sbjct: 300 DICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQ 359
Query: 320 RITDKLLGTLDGFLKEMANRPKNPERIREE---KLPPKQEPEPDMNEVKALPAPENSSPP 376
RIT KLL TL+ F+++ A R K+PER E + ++EPEPDMNE+KALP PEN +
Sbjct: 360 RITSKLLETLEEFVRDRAKRGKSPERKEIEAPPPVVEEEEPEPDMNEIKALPPPENYT-- 417
Query: 377 PPPPPKPQQPPKPQPQQVTDDLVNLKDDATSADEQGNKLALALFSGPPTNTNGSWEAFPS 436
PPP P+ P+P+ Q T+DLVNL++D +AD+QGNK ALALF+GPP N NG WEAF S
Sbjct: 418 --PPPPPEPEPQPEKPQFTEDLVNLREDEVTADDQGNKFALALFAGPPGN-NGKWEAFSS 474
Query: 437 NGQPEVTSAWQTPAAESGRADWESALVETAGNLSKQKAAYAGGFDSLVLNGMYDQGAVRQ 496
NG VTSAWQ PAAE G+ADWE ALVET NL KQ AA GGFD+L+LNGMYDQG VRQ
Sbjct: 475 NG---VTSAWQNPAAEPGKADWELALVETTSNLEKQTAALGGGFDNLLLNGMYDQGMVRQ 531
Query: 497 HVSTTQLSGGSASSVTLPGPGKSATPVLALPAPDGTVQTVGNNDPFAASLTVPPPSYVQM 556
HVST+QL+GGSASSV LP PGK+ VLALPAPDGTV+ V N DPFAASLT+PPPSYVQM
Sbjct: 532 HVSTSQLTGGSASSVALPLPGKTNNQVLALPAPDGTVEKV-NQDPFAASLTIPPPSYVQM 590
Query: 557 AEMERKQQFLVQEQQLWQQYGRDGMQGQVALAKIAGGSGYYGPNPQSMMPYGMPQVTGMG 616
AEME+KQ L QEQQLWQQY RDGM+GQ +LAK+ GP P YGMP V GMG
Sbjct: 591 AEMEKKQYLLSQEQQLWQQYQRDGMRGQASLAKMNT-----GPVPA----YGMPPVNGMG 641
Query: 617 QPGPGGYYYSPY 628
P G YY +PY
Sbjct: 642 PPPTGYYYNNPY 653
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/630 (42%), Positives = 380/630 (60%), Gaps = 88/630 (13%)
Query: 1 MAPSTIRKAIGAVKDQTSISLAKVAGNIAP--DLEVLVVKATSHDDEPADDKYVREIVSL 58
M S ++AIGAVKDQTS+ LAKV G A +L+V +VKAT H++ PA++KY+REI+SL
Sbjct: 1 MGSSKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILSL 60
Query: 59 MSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRL 118
SYSR Y++AC++T+S+RL+KT W VA+K L+L+ +LL +G +E EI ++TRRG RL
Sbjct: 61 TSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRGTRL 120
Query: 119 LNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMR------GGEGKVEEREDR 172
LNMSDFRD + SNSWD+ FVR YA+YLDE+++F + + + GGE EE +D+
Sbjct: 121 LNMSDFRDVSRSNSWDYSAFVRTYALYLDERLDFRMQARHGKRGVYCVGGEAD-EEEQDQ 179
Query: 173 FRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACR 232
D + +RSQ P+ EM+ E++ R+ L ++LD+ LACR
Sbjct: 180 AAADLSTAIVVRSQ------------------PIAEMKTEQIFIRIQHLQQLLDRFLACR 221
Query: 233 PTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAK 292
PTG A+N+R+V+VALY +VK+SF +Y D+ E +G+L+++F E++ D ++ ++ + +K
Sbjct: 222 PTGNARNNRVVIVALYPIVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSK 281
Query: 293 MIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKEMA--NRPKNPERIREE- 349
+EL FY WCK++GIARSSE+PE+++IT K L +D F+++ + K + ++ E
Sbjct: 282 QFEELDQFYSWCKNMGIARSSEYPEIEKITQKKLDLMDEFIRDKSALEHTKQSKSVKSEA 341
Query: 350 -------KLPPKQEPEPDMNEVKALPAPENSSPPPPPPPKPQQPPKPQ-----------P 391
+ E + DMN +KAL P PPPK + KP+
Sbjct: 342 DEDDDEARTEEVNEEQEDMNAIKAL---------PEPPPKEEDDVKPEEEAKEEVIIEKK 392
Query: 392 QQVTDDLVNLKD-DATSADEQGNKLALALFSGP-----PTNTNGSWEAFPSNGQPEVTSA 445
Q+ DL++L + + A + G+ LALALF GP + + WEAF +
Sbjct: 393 QEEMGDLLDLGNTNGGEAGQAGDSLALALFDGPYASGSGSESGPGWEAFKDDS------- 445
Query: 446 WQTPAAESGRADWESALVETAGNLSKQKAAYAGGFDSLVLNGMYDQGAVRQHVSTTQLSG 505
ADWE+ALV+TA NLS QK+ GGFD L+LNGMY GAV V T+ G
Sbjct: 446 ----------ADWETALVQTATNLSGQKSELGGGFDMLLLNGMYQHGAVNAAVKTSTAYG 495
Query: 506 --GSASSVTLPGPGKSATPVLALPAPDGTVQTVGN------NDPFAASLTVPPPSYVQMA 557
GSASS+ G+ A +LALPAP GN DPFAASL V PP+YVQM
Sbjct: 496 ASGSASSMAFGSAGRPAATMLALPAPSTANGNAGNINSPVPMDPFAASLEVAPPAYVQMN 555
Query: 558 EMERKQQFLVQEQQLWQQYGRDGMQGQVAL 587
+ME+KQ+ L++EQ +W QY RDG QG + L
Sbjct: 556 DMEKKQRMLMEEQMMWDQYSRDGRQGHMNL 585
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 271/653 (41%), Positives = 382/653 (58%), Gaps = 70/653 (10%)
Query: 1 MAPSTIRKAIGAVKDQTSISLAKVAGNIAP--DLEVLVVKATSHDDEPADDKYVREIVSL 58
M S +++AIGAVKDQTS+ LAKV G + +LE+ VVKAT HDD PA+DKY+REI+ L
Sbjct: 1 MGSSKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILCL 60
Query: 59 MSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRL 118
SYSR YVSAC+AT+S+RL+KT +W VA+K L+L+ +LL DG +E EI ++TRRG RL
Sbjct: 61 TSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGTRL 120
Query: 119 LNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFD 178
LNMSDFRD + S+SWD+ FVR YA+YLDE++++ +M+G GK + D
Sbjct: 121 LNMSDFRDASQSDSWDYSAFVRTYALYLDERLDY-----RMQGRRGKKKSGGGGGGDGDS 175
Query: 179 RGMELRSQSYGDV-SESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAA 237
+ + D+ S+++ + + P+ EM+ E++ R+ L ++LD+ LACRPTG A
Sbjct: 176 GEEDDHRGTSNDIRSKAIVVKSK----PVAEMKTEKIFNRVQHLQQLLDRFLACRPTGNA 231
Query: 238 KNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDEL 297
KN+R+V+VA+Y +VK+SF LY +I E +GVL+++F E++ D ++ +E + +K DEL
Sbjct: 232 KNNRVVIVAMYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDEL 291
Query: 298 VGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKEMANRPKNPERIREEKLPPK--- 354
FYGWCK++ +ARSSE+PE+++IT K L +D F+++ + + ++
Sbjct: 292 DPFYGWCKNMAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQTTKSSSKRSNKSEEE 351
Query: 355 -------QEPEPDMNEVKALPAPENSSPPPPPPPKPQQPPKPQPQQVTD---DLVNLKDD 404
QE + D+N +KALPAPE + + D DL++L D+
Sbjct: 352 ESKTEYIQENQEDLNSIKALPAPEQKEEEEEEEKMETKKDVEEVVSRQDQEGDLLDLTDE 411
Query: 405 A-TSADEQGNKLALALFSGPPTNTNGS---WEAFPSNGQPEVTSAWQTPAAESGRADWES 460
A +A G+ LALALF G + S WEAF N ADWE+
Sbjct: 412 AGVTAGTVGDSLALALFDGVVGTESASGPGWEAFNDNS-----------------ADWET 454
Query: 461 ALVETAGNLSKQKAAYAGGFDSLVLNGMYDQGAVRQHV--STTQLSGGSASSVTLPGPGK 518
LV +A LS QK+ GGFD+L+L+GMY GAV V ST S GSASSV G
Sbjct: 455 DLVRSATRLSGQKSELGGGFDTLLLDGMYQYGAVNAAVKTSTAYGSSGSASSVAFGSAGS 514
Query: 519 SATPVLALPAPDGTVQTVGNN----DPFAASLTVPPPSYVQMAEMERKQQFLVQEQQLWQ 574
A +LALPAP T N+ DPFAASL V PP+YVQM +ME+KQ+ L++EQ +W
Sbjct: 515 PAASMLALPAPPPTANGNRNSPVMVDPFAASLEVAPPAYVQMNDMEKKQRLLMEEQIMWD 574
Query: 575 QYGRDGMQGQVALAKIAGGSGYYGPNPQSMMPYGMPQVTGMGQPGPGGYYYSP 627
QY R G QG + G +PY M G Y Y+P
Sbjct: 575 QYNRSGRQGHMNF-------GQNQQQQYYQLPYSM-----------GPYSYTP 609
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 215/344 (62%), Gaps = 18/344 (5%)
Query: 3 PSTIRKAIGAVKDQTSISLAKVA-----GNIAPDLEVLVVKATSHDDE-PADDKYVREIV 56
PS ++KAIGAVKDQTSISLAKVA G LEV ++KATSHD+E P DD+ V EI+
Sbjct: 2 PSKLKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEIL 61
Query: 57 SLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGM 116
++S + + ++C A I +R+ +T +WIVA+K+L+LV ++ DG F E++++ +RG
Sbjct: 62 GIISSKKSHAASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGA 121
Query: 117 RLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDD 176
++LN+S FRD+++S WD FVR +A+YLDE+++ + K R + RE R
Sbjct: 122 KILNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQR----RYTNREQTGRIS 177
Query: 177 FDRGMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGA 236
+ R + + +R+M+P +L ++ ++LD+ +A RPTG
Sbjct: 178 TNSTTRSRFNPKAGI--------KSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGD 229
Query: 237 AKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDE 296
AK +RLV ++LY V+++SF LY DI + L +LLD F ++Y C+ F+A V A+K +E
Sbjct: 230 AKANRLVKMSLYAVMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEE 289
Query: 297 LVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKEMANRP 340
L FY K IGI R+SE+P +Q+I+ +LL TL FLK+ ++ P
Sbjct: 290 LNAFYDLSKSIGIGRTSEYPSIQKISLELLETLQEFLKDQSSFP 333
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 259/508 (50%), Gaps = 68/508 (13%)
Query: 7 RKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSY--SRG 64
R+A GA+KD T + L +V + A +L+V +VKAT+H + P D+++R+I S R
Sbjct: 8 RRAYGALKDTTKVGLVRVNSDYA-ELDVAIVKATNHVECPPKDRHLRKIFLATSAIRPRA 66
Query: 65 YVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDF 124
V+ CI +S+RL KT +W VA+KAL+++H+LL DG F +E++ +++G R++ +S+F
Sbjct: 67 DVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKG-RIMQISNF 125
Query: 125 RDEAHSNSWDHGGFVRFYAMYLDEKVE-FVVYEKKMRGGEGKVEEREDRFRDDFDRGMEL 183
+D++ +WD G+VR YA++L+E++E F V + + ER + ++G
Sbjct: 126 KDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDIEA------ERLPKVSPGQEKGY-- 177
Query: 184 RSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLV 243
+ R++ E++L +L L ++L +++ C+P GAAK++ ++
Sbjct: 178 --------------------SKTRDLDGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHII 217
Query: 244 LVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGFYGW 303
AL LV+K+SF +Y I E + L++KF EM + ++ E Y A L FY
Sbjct: 218 QYALSLVLKESFKVYCAINEGIINLVEKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEV 277
Query: 304 CKDIGIARSSEFPEVQRITDKLLGTLDGFLK---EMANRPKNPERI---------REEKL 351
CK + +AR+ +FP ++ L T++ +++ +M + P + E+
Sbjct: 278 CKGLELARNFQFPVLREPPQSFLTTMEEYMRDAPQMVDVTSGPLLLTYTPDDGLTSEDVG 337
Query: 352 PPKQEPEPDMNEVKALPAPENSSPPPPPPPKPQQPPKPQPQQVTDDLVNLKDDATS--AD 409
P +E E A+ E + PP + PQ TDDL+ L DD A
Sbjct: 338 PSHEEHETSSPSDSAVVPSEETQLSSQSPPSVE---TPQNFIDTDDLLGLHDDTPDPLAI 394
Query: 410 EQGNKLALALFSGPPTNTNGSWEAFPSNGQPEVTSAWQTPAAESGRADWESALVETAGN- 468
N LALAL S + + S +F GQ A + + WE ALV T N
Sbjct: 395 LDQNALALALVSN---DVDSSPFSF---GQ----------ARDLDPSGWELALVTTPSND 438
Query: 469 -LSKQKAAYAGGFDSLVLNGMYDQGAVR 495
+ + AGG D+L LN +YD GA+R
Sbjct: 439 ISAATERQLAGGLDTLTLNSLYDDGALR 466
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/587 (27%), Positives = 274/587 (46%), Gaps = 99/587 (16%)
Query: 4 STIRKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYS- 62
++ RKA+GA+KD T++S+AKV DL+V +VKAT+H + ++++R I S S
Sbjct: 5 NSFRKAVGAIKDSTTVSIAKVNSEFK-DLDVAIVKATNHVESAPKERHIRRIFSATSVVQ 63
Query: 63 -RGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNM 121
R V+ CI ++KRLSKT +W+VA+K L+++H+ L +G F +E++ + RG +L +
Sbjct: 64 PRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRG-HILRI 122
Query: 122 SDFRDEAHSNSWDHGGFVRFYAMYLDEKVE------FVVYEKKMRGGEGKVEEREDRFRD 175
S+F+D+ +WD ++R YA++L+E++E + + +++ G G + D
Sbjct: 123 SNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVD---- 178
Query: 176 DFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTG 235
F+ R++ D E +L +L L ++L +++ C+P G
Sbjct: 179 -FNASQTYRTRMLSD---------------------EELLEQLPALQQLLYRLIGCQPEG 216
Query: 236 AAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMID 295
+A ++ L+ AL LV+K+SF +Y I + + L+D F EM D V+ Y A + +
Sbjct: 217 SAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAE 276
Query: 296 ELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKEMANRPKNPERI--------- 346
L FY +CK + +AR+ +FP +++ L T++ ++KE +++
Sbjct: 277 NLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEDYIKEAPQSGSVQKKLEYQEKEEEE 336
Query: 347 -----REEKLPPKQEPEPDMNEVKALPAPENSSPPPP--------PPPKPQQPPKPQPQQ 393
E + P++ E D + ENS P ++ KP
Sbjct: 337 QEEEEAEHSVQPEEPAEADNQK-------ENSEGDQPLIEEEEEDQEKIEEEDAKPSFLI 389
Query: 394 VTDDLVNLKDDATSADEQGNKLALALFSGPPTNTNGSWEAFPSNGQPEVTSAWQTPAAES 453
TDDL+ L + A E ++ ALAL PP G PSN + E+
Sbjct: 390 DTDDLLGLNEINPKAAEIEDRNALALAIYPP----GHEAPGPSNILSLI---------ET 436
Query: 454 GRADWESALV------ETAGNLSKQKAAYAGGFDSLVLNGMYDQGAVRQHVSTTQLSGGS 507
G + WE ALV AGGFD+L+L+ +Y+ + R+ + T G
Sbjct: 437 GGSGWELALVTPQNNNNNNNPRPAPNTKLAGGFDNLLLDSLYEDDSARRQIQLTNAGYGH 496
Query: 508 ASSVTLPGPGKSATPVLALPAPDGTVQTVGNNDPFAASLTVPPPSYV 554
T P P P Q DPFA S + PP+ V
Sbjct: 497 GGIDTTAAP----------PNPFQMQQ-----DPFAMSNNIAPPTNV 528
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 273/563 (48%), Gaps = 93/563 (16%)
Query: 7 RKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYSRGY- 65
RKA GA+KD T + L +V A DL+V +VKAT+H + P D+++R+I + S +R
Sbjct: 8 RKAYGALKDSTKVGLVRVNSEYA-DLDVAIVKATNHVECPPKDRHLRKIFAATSVTRARA 66
Query: 66 -VSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDF 124
V+ CI +S+RL KT +W VA+K L+++H+LL +G F +E++ ++RG R+L +S+F
Sbjct: 67 DVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRG-RILQLSNF 125
Query: 125 RDEAHSNSWDHGGFVRFYAMYLDEKVE-FVVYEKKMRGGEGKVEEREDRFRDDFDRGMEL 183
+D++ +WD +VR YA++L+E++E F V + ER + D+G
Sbjct: 126 KDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEA------ERLPKSNPGQDKGY-- 177
Query: 184 RSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLV 243
+ R++ E +L +L L ++L +++ CRP GAA ++ ++
Sbjct: 178 --------------------SRTRDLDGEELLEQLPALQQLLYRLIGCRPEGAANHNHVI 217
Query: 244 LVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGFYGW 303
AL LV+K+SF +Y I + + L+DKF EM + + E Y A + L FY
Sbjct: 218 QYALALVLKESFKVYCAINDGIINLIDKFFEMAKHEAITSLEIYKRAGQQARSLSDFYEA 277
Query: 304 CKDIGIARSSEFPEVQRITDKLLGTLDGFLKE---MANRPKNPERI--REEKLPPKQEPE 358
CK + +AR+ +FP ++ L T++ ++KE + + P P + R + ++ E
Sbjct: 278 CKGLELARNFQFPVLREPPQSFLTTMEEYIKEAPRVVDVPAEPLLLTYRPDDGLTTEDTE 337
Query: 359 PDMNEVKALPAPENSSPPPPPPPKPQQPPKPQPQQV--TDDLVNLKDDA--TSADEQGNK 414
P E + LP+ + P P PP Q TDDL L A TS E N
Sbjct: 338 PSHEEREMLPSDDVVVVSEETEPSPPPPPSANAQNFIDTDDLWGLNTGAPDTSVIEDQNA 397
Query: 415 LALALFS---GPPTNTNGSWEAFPSNGQPEVTSAWQTPAAESGRADWESALVET-AGNLS 470
LALA+ S PPT P GQP WE ALV + ++S
Sbjct: 398 LALAIVSTDADPPT---------PHFGQPN----------NYDPTGWELALVTAPSSDIS 438
Query: 471 -KQKAAYAGGFDSLVLNGMYDQGAVRQHVSTTQLSGGSASSVTLPGPGKSATPVLALPAP 529
+ AGG D+L L+ +YD GA S PV PAP
Sbjct: 439 ASTERKLAGGLDTLTLSSLYDDGAYI----------------------ASQRPVYGAPAP 476
Query: 530 DGTVQTVGNNDPFAASL-TVPPP 551
+ ++DPFA+S T PPP
Sbjct: 477 N----PFASHDPFASSNGTAPPP 495
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 277/572 (48%), Gaps = 92/572 (16%)
Query: 6 IRKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYSR-- 63
+R+ +GA+KD T++SLAKV + +L++ +VKAT+H + P+ ++Y+R I +S +R
Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSDYK-ELDIAIVKATNHVERPSKERYIRAIFMAISATRPR 69
Query: 64 GYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSD 123
V+ CI +++RLS+TH+W VA+K L+++H+ L + F +E++ +R +LNMS
Sbjct: 70 ADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSH 129
Query: 124 FRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFDRGMEL 183
F+D++ N+W + +VRFYA++L+E++E R + VE R + D D
Sbjct: 130 FKDDSGPNAWAYSAWVRFYALFLEERLEC------FRVLKYDVEVDPPRTK-DLD----- 177
Query: 184 RSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLV 243
TP +L +L L +L +VL C+P GAA + ++
Sbjct: 178 --------------------TP-------DLLEQLPALQELLFRVLDCQPEGAAVQNHII 210
Query: 244 LVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGFYGW 303
+AL +V+ +S +Y + + + L+DKF +M+ D V+ + Y A K L F+
Sbjct: 211 QLALSMVISESTKIYQALTDGIDNLVDKFFDMQRNDAVKALDMYRRAVKQAGRLSEFFEV 270
Query: 304 CKDIGIARSSEFPEVQRITDKLLGTLDGFLKE--MANRPKNPERIREEKLPPKQEPEPDM 361
CK + + R F ++++ L ++ ++KE +A K + + EKL +E
Sbjct: 271 CKSVNVGRGERFIKIEQPPTSFLQAMEEYVKEAPLAAGVKKEQVV--EKLTAPKEILAIE 328
Query: 362 NEVKALPAPENSSPPPPPPPKPQQPPKPQPQQVTDDLVNLKDDATSADEQGNKLALALFS 421
E+ E + P P + ++P + QP DL+++ D A E K ALAL
Sbjct: 329 YEIPPKVVEEKPASPEPVKAEAEKPVEKQP-----DLLSMDDPAPMVSELEEKNALALAI 383
Query: 422 GPPTNTNGSWEAFPSNGQPEVTSAWQTPAAESGRADWESALVETAGNLSKQKAA---YAG 478
P S QP T+ + T +G WE ALV TA + ++ AA AG
Sbjct: 384 VP-----------VSVEQPHSTTDF-TNGNSTG---WELALV-TAPSSNEGAAADSKLAG 427
Query: 479 GFDSLVLNGMYDQGAVRQHVSTTQLSGGSASSVTLPGPGKSATPVLALPAPDGTVQTVGN 538
G D L L+ +Y + A+R VS Q +S P P +G +
Sbjct: 428 GLDKLTLDSLY-EDAIR--VSQQQ--------------NRSYNPWEQNPVHNGHMM---- 466
Query: 539 NDPFAASLTVPPPSYVQMAEMERKQQFLVQEQ 570
+ PF AS V P QMA + Q F Q Q
Sbjct: 467 HQPFYASNGVAAPQPFQMAN-QNHQTFGYQHQ 497
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 189/335 (56%), Gaps = 34/335 (10%)
Query: 4 STIRKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSY-- 61
++ RKA GA+KD T++ LAKV DL++ +VKAT+H + P +++VR+I S S
Sbjct: 5 TSFRKAYGALKDTTTVGLAKVNSEFK-DLDIAIVKATNHVESPPKERHVRKIFSATSVIQ 63
Query: 62 SRGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIV-YSTRRGMRLLN 120
R V+ CI +SKRLSKT +W+VA+K L+++H+ L +G F +E++ YS RR +L
Sbjct: 64 PRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRR--HILR 121
Query: 121 MSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFDRG 180
+S+F+D+ +WD +VR YA++L+E++E K +D
Sbjct: 122 ISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLK-------------------YDIE 162
Query: 181 MELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNS 240
E ++ G S++ R R + E +L +L L ++L +++ C+P GAA ++
Sbjct: 163 AERLPKASGAASKTHR---------TRMLSGEDLLEQLPALQQLLYRLIGCQPEGAAYSN 213
Query: 241 RLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGF 300
L+ AL LV+K+SF +Y I + + L+D F EM D V+ Y A + + L F
Sbjct: 214 YLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLAEF 273
Query: 301 YGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
Y +CK + +AR+ +FP +++ L T++ ++KE
Sbjct: 274 YDYCKGLELARNFQFPTLRQPPPSFLATMEEYIKE 308
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 136/323 (42%), Gaps = 59/323 (18%)
Query: 7 RKAIGAVKDQTS---ISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYSR 63
++A GA+KD+ + I ++ PDL+ ++ ATSHDD D + + S
Sbjct: 5 KRASGALKDRKTLFTIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWIRSSP 64
Query: 64 GYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRL-LNMS 122
+ + +S R+++T WIVA+KALMLVH +L V S + RL ++S
Sbjct: 65 ANLKPLVHALSSRVNRTRSWIVALKALMLVHGVLCCK--------VTSLQEIRRLPFDLS 116
Query: 123 DFRDEAH---SNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFDR 179
DF D H S +W F+R Y +LD+ F
Sbjct: 117 DFSD-GHSRPSKTWGFNAFIRAYFSFLDQYSFF--------------------------- 148
Query: 180 GMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKN 239
+S+ +RR ++ ER+ +L LL +L L RP
Sbjct: 149 -----------LSDQIRRRHKKPQLDSVNQELERI-EKLQSLLHML---LQIRPMADNMK 193
Query: 240 SRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEME-YADCVRGFEAYVSAAKMIDELV 298
L+L A+ VV + F +Y IC A+ LL K A+ V + A ++L
Sbjct: 194 KTLILEAMDCVVIEIFDIYGRICSAIAKLLIKIHPAAGKAEAVIALKIVKKATSQGEDLA 253
Query: 299 GFYGWCKDIGIARSSEFPEVQRI 321
++ +CK+ G++ + + P+ I
Sbjct: 254 LYFEFCKEFGVSNAHDIPKFVTI 276
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 137/325 (42%), Gaps = 49/325 (15%)
Query: 6 IRKAIGAVKDQTSISLAKVAG---NIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYS 62
R+ +G KD SI A V D+EV VV+ATSHDD P DDK + EI+ L+S +
Sbjct: 9 FRQVLGLAKDHASIGRAIVQNYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEILFLVSNT 68
Query: 63 RGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMS 122
G + IS+RL+KT D +VA K L+L H+LL E ++ + G + S
Sbjct: 69 PGSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLRGSSRSIEQQLHIAHTSGHLQIGCS 128
Query: 123 DFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVV-----YEKKMRGGEGKVEEREDRFRDDF 177
F S S+ F++ Y YL E+V +++ E M GG +F
Sbjct: 129 WFMMSLDSRSF---VFLQNYVAYLQERVGWIINQAGKLEPVMSGGT--------KFSRYK 177
Query: 178 DRGMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAA 237
++ M+L V L + + +VL C P A
Sbjct: 178 EKSMDL------------------------------VFHILPKCQEFIAQVLKCSPVDAW 207
Query: 238 KNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDEL 297
LV A ++K+SF +Y+ + + L+ ++ A++ I +L
Sbjct: 208 PIDNLVQAATGNILKESFQVYMTYSDGMTALVSMLFDLSRPARDLACGMLRKASQQIQDL 267
Query: 298 VGFYGWCKDIGIARSSEFPEVQRIT 322
Y C+ +S ++P VQ I+
Sbjct: 268 RILYDKCRGFAGMKSLDYPSVQAIS 292
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 138/323 (42%), Gaps = 55/323 (17%)
Query: 7 RKAIGAVKDQTSISLAKVAGNIAP----DLEVLVVKATSHDDEPADDKYVREIVSLMSYS 62
++A A+KD+ S+ + + DLE ++KATSHDD D + + S
Sbjct: 5 KRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVYKWIRSS 64
Query: 63 RGYVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLL--N 120
+ + IS R++ T WIVA+K+LML+H +L V S R L +
Sbjct: 65 PLNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVLCCK--------VPSVVGEFRRLPFD 116
Query: 121 MSDFRD--EAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFD 178
+SDF D S +W FVR Y +L F+ ++ R R +
Sbjct: 117 LSDFSDGHSCLSKTWGFNVFVRTYFAFLHHYSSFL-------------SDQIHRLRGNNR 163
Query: 179 RGMELRSQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAK 238
R +E S+SV +E L R+ +L +LD +L RP
Sbjct: 164 RSLE-------KTSDSVIQE----------------LERIQKLQSLLDMILQIRPVADNM 200
Query: 239 NSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELV 298
L+L A+ +V +S +Y IC A+ +L + E A ++ S ++L+
Sbjct: 201 KKTLILEAMDCLVIESINIYGRICGAVMKVLPLAGKSEAATVLKIVNKTTSQG---EDLI 257
Query: 299 GFYGWCKDIGIARSSEFPEVQRI 321
++ +CK G++ + E P+ RI
Sbjct: 258 VYFEFCKGFGVSNAREIPQFVRI 280
>sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1
SV=1
Length = 901
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 42/343 (12%)
Query: 36 VVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHK 95
V KAT+H+ K++ ++ + + + T+ +R + + W+V KAL+ H
Sbjct: 26 VCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNSS-WVVVFKALVTTHH 84
Query: 96 LLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVY 155
L++ G+ F I Y R L N+S+F D++ S+ +D F+R Y+ YL+EK
Sbjct: 85 LMVHGNERF---IQYLASRN-TLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEK------ 134
Query: 156 EKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVL 215
+ SY ++ R ++ MR M PE++L
Sbjct: 135 -----------------------------AFSYRQMAFDFARVKKGADGVMRTMVPEKLL 165
Query: 216 ARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEM 275
+ L +D +L + ++ A L+ KD L+ + + LL+KF EM
Sbjct: 166 KSMPILQGQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEM 225
Query: 276 EYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
+ C E Y + + F + +GI + + P++ + L+ TL+ L
Sbjct: 226 KKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVGIDK-GDIPDLTQAPSSLMETLEQHLNT 284
Query: 336 M-ANRPKNPERIREEKLPPKQEPEPDMNEVKALPAPENSSPPP 377
+ +P N E K P + + PA + PP
Sbjct: 285 LEGKKPGNNEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPP 327
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 42/343 (12%)
Query: 36 VVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHK 95
V KAT+H+ K++ ++ + + + T+ +R + + W+V KAL+ H
Sbjct: 26 VCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNSS-WVVVFKALVTTHH 84
Query: 96 LLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVY 155
L++ G+ F I Y R L N+S+F D++ S+ +D F+R Y+ YL+EK
Sbjct: 85 LMVHGNERF---IQYLASRN-TLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEK------ 134
Query: 156 EKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVL 215
+ SY ++ R ++ MR M PE++L
Sbjct: 135 -----------------------------AFSYRQMAFDFARVKKGADGVMRTMVPEKLL 165
Query: 216 ARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEM 275
+ L +D +L + ++ A L+ KD L+ + + LL+KF EM
Sbjct: 166 KSMPILQGQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEM 225
Query: 276 EYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
+ C E Y + + F ++GI + + P++ + L+ TL+ L
Sbjct: 226 KKGQCKDALEIYKRFLTRMTRVSEFLKVADEVGIDK-GDIPDLTQAPSSLMETLEQHLNT 284
Query: 336 M-ANRPKNPERIREEKLPPKQEPEPDMNEVKALPAPENSSPPP 377
+ +P N E K P + + PA + PP
Sbjct: 285 LEGKKPGNNEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPP 327
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 42/343 (12%)
Query: 36 VVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHK 95
V KAT+H+ K++ ++ + + + T+ +R + + W+V KAL+ H
Sbjct: 26 VCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNSS-WVVVFKALVTTHH 84
Query: 96 LLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVY 155
L++ G+ F I Y R L N+S+F D++ S+ +D F+R Y+ YL+EK
Sbjct: 85 LMVHGNERF---IQYLASRN-TLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEK------ 134
Query: 156 EKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVL 215
+ SY ++ R ++ MR M PE++L
Sbjct: 135 -----------------------------AFSYRQMAFDFARVKKGADGVMRTMAPEKLL 165
Query: 216 ARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEM 275
+ L +D +L + ++ A L+ KD L+ + + LL+KF EM
Sbjct: 166 KSMPILQGQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEM 225
Query: 276 EYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
+ C E Y + + F + +GI + + P++ + L+ TL+ L
Sbjct: 226 KKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVGIDK-GDIPDLTQAPSSLMETLEQHLNT 284
Query: 336 M-ANRPKNPERIREEKLPPKQEPEPDMNEVKALPAPENSSPPP 377
+ +P N E K P + + PA + PP
Sbjct: 285 LEGKKPGNNEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPP 327
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 124/304 (40%), Gaps = 41/304 (13%)
Query: 36 VVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHK 95
V KAT+H+ K++ ++ + + ++ +R + + W+V K+L+ H
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFKSLITTHH 84
Query: 96 LLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVY 155
L++ G+ F I Y R L N+S+F D++ +D F+R Y+ YL+EK
Sbjct: 85 LMVYGNERF---IQYLASRN-TLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEK------ 134
Query: 156 EKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVL 215
+ SY V+ + +R MR M E++L
Sbjct: 135 -----------------------------AVSYRQVAFDFTKVKRGADGVMRTMNTEKLL 165
Query: 216 ARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEM 275
+ + +D +L + ++ A L+ KD+ L+ E + LL+K+ +M
Sbjct: 166 KTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDM 225
Query: 276 EYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
+ C G + Y + + F + +GI R + P++ + LL L+ L
Sbjct: 226 KKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDR-GDIPDLSQAPSSLLDALEQHLAS 284
Query: 336 MANR 339
+ +
Sbjct: 285 LEGK 288
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 123/301 (40%), Gaps = 41/301 (13%)
Query: 36 VVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHK 95
V KAT+H+ K++ ++ + + ++ +R + + W+V K+L+ H
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFKSLITTHH 84
Query: 96 LLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVY 155
L++ G+ F I Y R L N+S+F D++ +D F+R Y+ YL+EK
Sbjct: 85 LMVYGNERF---IQYLASRN-TLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEK------ 134
Query: 156 EKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVL 215
+ SY V+ + +R MR M E++L
Sbjct: 135 -----------------------------AVSYRQVAFDFTKVKRGADGVMRTMNTEKLL 165
Query: 216 ARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEM 275
+ + +D +L + ++ A L+ KD+ L+ E + LL+K+ +M
Sbjct: 166 KTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDM 225
Query: 276 EYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
+ C G + Y + + F + +GI R + P++ + LL L+ L
Sbjct: 226 KKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDR-GDIPDLSQAPSSLLDALEQHLAS 284
Query: 336 M 336
+
Sbjct: 285 L 285
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 123/301 (40%), Gaps = 41/301 (13%)
Query: 36 VVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVHK 95
V KAT+H+ K++ ++ + + ++ +R + + W+V K+L+ H
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFKSLITTHH 84
Query: 96 LLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVVY 155
L++ G+ F I Y R L N+S+F D++ +D F+R Y+ YL+EK
Sbjct: 85 LMVYGNERF---IQYLASRN-TLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEK------ 134
Query: 156 EKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPERVL 215
+ SY V+ + +R MR M E++L
Sbjct: 135 -----------------------------AVSYRQVAFDFTKVKRGADGVMRTMNTEKLL 165
Query: 216 ARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFTEM 275
+ + +D +L + ++ A L+ KD+ L+ E + LL+K+ +M
Sbjct: 166 KTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDM 225
Query: 276 EYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFLKE 335
+ C G + Y + + F + +GI R + P++ + LL L+ L
Sbjct: 226 KKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDR-GDIPDLSQAPSSLLDALEQHLAS 284
Query: 336 M 336
+
Sbjct: 285 L 285
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 10 IGAVKDQTSISLAK-VAGNIAP---DLEVLVVKATSHD-DEPADDKYVREIVSLMSYSRG 64
IG +KD+ S S A V+ N + V++AT+HD P ++++ I+S + SR
Sbjct: 11 IGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVILSAGTGSRA 70
Query: 65 YVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEI-VYSTRRGMRLLNMSD 123
S+ + +I +RL T D VA+K+L+++H ++ G + +D++ V+ G L +S
Sbjct: 71 TASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPASGGRNYLKLSA 130
Query: 124 FRDEAHSNSWDHGGFVRFYAMYLDE 148
FRDE W+ +VR+YA+YL+
Sbjct: 131 FRDEKSPLMWELSSWVRWYALYLEH 155
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 51/320 (15%)
Query: 35 LVVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVH 94
LV AT P KYV I+S S +RG + + RLS T W + KAL+++H
Sbjct: 8 LVKGATKIKMAPPKQKYVDPILSGTSSARG-LQEITHALDIRLSDT-AWTIVYKALIVLH 65
Query: 95 KLLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGF--VRFYAMYLDEKVEF 152
++ G E ++ + R L++ R +H+ W ++ Y YL + E
Sbjct: 66 LMIQQG----EKDV--TLRHYSHNLDVFQLRKISHTTKWSSNDMRALQRYDEYLKTRCE- 118
Query: 153 VVYEKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPE 212
+ R G D RD++ ++L S++ + E + E E
Sbjct: 119 ----EYGRLGM-------DHLRDNYS-SLKLGSKNQLSMDEELDHVESLEI--------- 157
Query: 213 RVLARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKF 272
++N L+R + + + + L+L A L+V+D GLY + E + LL+ F
Sbjct: 158 ----QINALIR-------NKYSVSDLENHLLLYAFQLLVQDLLGLYNALNEGVITLLESF 206
Query: 273 TEMEYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGF 332
E+ R + Y M + +V + K +G+ + P ++ IT KL+ +L+
Sbjct: 207 FELSIEHAKRTLDLYKDFVDMTEYVVRYLKIGKAVGL----KIPVIKHITTKLINSLEEH 262
Query: 333 LKEMANR----PKNPERIRE 348
L+E R P P++ R+
Sbjct: 263 LREETKRQRGEPSEPQQDRK 282
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 130/333 (39%), Gaps = 75/333 (22%)
Query: 7 RKAIGAVKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYSRGYV 66
R+ GA+KD+ S+ A A V+KATSH+D D + V+ I + +
Sbjct: 9 RRVSGAIKDKLSLITATDEKFTAA-----VIKATSHNDVSMDIENVQFIYRYIQSNPSSF 63
Query: 67 SACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDF-- 124
I +S R+ T +W VA+K LML+H L G ++ D I G ++S F
Sbjct: 64 KPIIRAVSLRVEHTRNWTVALKCLMLLHGLFFSG-IMTVDSI------GRLPFDLSGFGR 116
Query: 125 RDEAHSNSWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFDRGMELR 184
R S + FVR Y M+LDE+ + Y K M
Sbjct: 117 RKSRFSRTGRFNIFVRAYFMFLDER-SILYYNKNM------------------------- 150
Query: 185 SQSYGDVSESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLVL 244
+R E ++ ++ RI+D ++ +P G + LV+
Sbjct: 151 ------------------------IRLEIIV----KMQRIVDSLMRIKPIG---ETPLVI 179
Query: 245 VALYLVVKDSFGLYVDICEAL-GVLLD---KFTEMEYADCVRGFEAYVSAAKMIDELVGF 300
A+ V+ + + IC G L D E+ A+ + ++L +
Sbjct: 180 EAMEYVISEVVLINGHICRGFAGFLSDVQSNMLEISSAEADLAMNIVAKSLSQREKLFKY 239
Query: 301 YGWCKDIGIARSSEFPEVQRITDKLLGTLDGFL 333
+ +C+ G+ + E + RIT+ + LD L
Sbjct: 240 FEFCRGFGVTNAQETSNILRITESQMIVLDKLL 272
>sp|Q9XZI6|PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11
OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1
Length = 586
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 132/325 (40%), Gaps = 44/325 (13%)
Query: 13 VKDQTSISLAKVAGNIAPDLEVLVVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIAT 72
+ D+ + + +AG+ L + KAT+ + K++ ++ + + +
Sbjct: 21 ISDRLTAAKHSLAGS---QLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 73 ISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAH-SN 131
+ +R ++ +W V KAL+ +H ++ G+ F + N++ F D+ +
Sbjct: 78 LIER-TQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTT----FNLTAFVDKVGGAG 132
Query: 132 SWDHGGFVRFYAMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDV 191
+D VR YA Y+ EK+ R F DF +
Sbjct: 133 GYDMSTHVRRYAKYIGEKIN---------------TYRMCAF--DFCK------------ 163
Query: 192 SESVRREERREATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVV 251
V+R RE +R M +++L + L +D +L T + N+ ++ + L+
Sbjct: 164 ---VKRG--REDGLLRTMHTDKLLKTIPILQNQIDALLEFSVTTSELNNGVINCSFILLF 218
Query: 252 KDSFGLYVDICEALGVLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIAR 311
+D L+ + + +L+K+ +M C + Y S +D++ F + +GI R
Sbjct: 219 RDLIRLFACYNDGIINVLEKYFDMNKKQCRDALDTYKSFLTRLDKVAEFLRVAESVGIDR 278
Query: 312 SSEFPEVQRITDKLLGTLDGFLKEM 336
E P++ R LL L+ L +
Sbjct: 279 -GEIPDLTRAPASLLEALEAHLIHL 302
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 38/302 (12%)
Query: 35 LVVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIVAVKALMLVH 94
LV AT P KY+ I+ S + + + R++ T W + K+L++VH
Sbjct: 7 LVKGATKIKSAPPKQKYLDPILLGTSNEEDFYE-IVKGLDSRINDT-AWTIVYKSLLVVH 64
Query: 95 KLLLDGHLLFEDEIVYSTRRGMRLLNMSDFRDEAHSNSWDHGGFVRFYAMYLDEKVEFVV 154
++ +G +D + R + ++ + R S S D R Y YL
Sbjct: 65 LMIREGS---KDVALRYYSRNLEFFDIENIRGSNGSASGDMRALDR-YDNYL-------- 112
Query: 155 YEKKMRGGE-GKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERREATPMREMRPER 213
K+R E GK+ ++D RD + R ++L S +YG S R ++ + +
Sbjct: 113 ---KVRCREFGKI--KKDYVRDGY-RTLKLNSGNYG----SSRNKQHSINIALDHVESLE 162
Query: 214 VLARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDICEALGVLLDKFT 273
V + ++ + T ++ L++ L+++D LY + E + LL+ F
Sbjct: 163 VQ---------IQALIKNKYTQYDLSNELIIFGFKLLIQDLLALYNALNEGIITLLESFF 213
Query: 274 EMEYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRITDKLLGTLDGFL 333
E+ + + R + Y + + + +V + K G+ + P ++ IT KL+ +L+ L
Sbjct: 214 ELSHHNAERTLDLYKTFVDLTEHVVRYLKSGKTAGL----KIPVIKHITTKLVRSLEEHL 269
Query: 334 KE 335
E
Sbjct: 270 IE 271
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 57/313 (18%)
Query: 28 IAPD--LEVLVVKATSHDDEPADDKYVREIVSLMSYSRGYVSACIATISKRLSKTHDWIV 85
IA D L VVKATSHD+ D + + I + S + ++ IS R+ +T W V
Sbjct: 18 IAADDILTAAVVKATSHDELSIDTESAQFIYRHVLSSPSSLKPLVSLISSRVKRTRSWAV 77
Query: 86 AVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDF---RDEAHSNSWDHGGFVRFY 142
A+K LML+H G L + + S G ++S F S S FVR Y
Sbjct: 78 ALKGLMLMH-----GFFLCKSTVAESI--GRLPFDLSSFGEGNSRIMSKSGGFNLFVRAY 130
Query: 143 AMYLDEKVEFVVYEKKMRGGEGKVEEREDRFRDDFDRGMELRSQSYGDVSESVRREERRE 202
+LD R F D Y + S + R
Sbjct: 131 FAFLD--------------------RRSILFHDG-------NRHRYNEESSVLIR----- 158
Query: 203 ATPMREMRPERVLARLNQLLRILDKVLACRPTGAAKNSRLVLVALYLVVKDSFGLYVDIC 262
L + ++ I+D ++ +P G ++ A+ VV + +Y IC
Sbjct: 159 ------------LVIIRKMQIIVDSLIRIKPIGENMMIPVINEAMENVVSEIMEIYGWIC 206
Query: 263 EALG-VLLDKFTEMEYADCVRGFEAYVSAAKMIDELVGFYGWCKDIGIARSSEFPEVQRI 321
+ VL + +++ + + + K EL ++ +CKD+G++ + E P RI
Sbjct: 207 RRIAEVLPNVHSKIGKTEADLALKIVAKSMKQGGELKKYFEFCKDLGVSNAQEIPNFVRI 266
Query: 322 TDKLLGTLDGFLK 334
+ + LD ++
Sbjct: 267 PEADVIHLDELVR 279
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 10 IGAVKDQTSISLAKVAGNIAPD----LEVLVVKATSHD-DEPADDKYVREIVSLMSYSRG 64
IG KD+ SI A++ + + + ++K+T+ ++P + YV ++S S SR
Sbjct: 9 IGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVIS-YSNSR- 66
Query: 65 YVSACIATISKRLSKTHDWIVAVKALMLVHKLLLDGHLLFEDEIVYSTRRGMRLLNMSDF 124
Y A + RL T + IVA K+L+++HKL+ FE G L +++F
Sbjct: 67 YAPAAFSAALWRLRVTKNAIVATKSLIVIHKLIKSSRDKFE-----GLGHGRNNLKLNEF 121
Query: 125 RDEAHSNSWDHGGFVRFYAMYLD 147
D++ + + + ++R+Y YLD
Sbjct: 122 SDKSSNLTLELSQWIRWYGQYLD 144
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2
SV=1
Length = 1334
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 339 RPKNPERIREEKLPPKQEPEPDMNEVKALPAPENSSPPPPPPPKPQQPPKPQPQQVTDDL 398
RP + ++EE P EPEP +K+L A N P PP P +PP P L
Sbjct: 782 RPVSKPVVKEEVKPSTPEPEP----IKSLLAQPNVCTVPDPPAIPNKPPTPACSSPLSWL 837
Query: 399 VNLKDDATSADEQGNKLALALFSGPPTNTNGSWEAFPSNGQPEVTSAWQT 448
N + + + N LF+ + + +F S G+P SA QT
Sbjct: 838 TNFPQTIVNKENKDN-----LFASTSKSEHKPLPSFASFGKP--VSALQT 880
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 258,347,424
Number of Sequences: 539616
Number of extensions: 12272293
Number of successful extensions: 105031
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 898
Number of HSP's that attempted gapping in prelim test: 70814
Number of HSP's gapped (non-prelim): 19154
length of query: 628
length of database: 191,569,459
effective HSP length: 124
effective length of query: 504
effective length of database: 124,657,075
effective search space: 62827165800
effective search space used: 62827165800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)