BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045672
(643 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/618 (69%), Positives = 511/618 (82%), Gaps = 2/618 (0%)
Query: 28 PVAS--CNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCL 85
PV + C+ + + + LL +FTR CYQRDLPRAMKAM ++Q HG+ ADS TY+ELIKCC+
Sbjct: 13 PVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCI 72
Query: 86 ARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTT 145
+ AV E L+ H+ G P FLVN+L+NM+VKF+LL +A LFDQMP+RNV+SWTT
Sbjct: 73 SNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTT 132
Query: 146 MISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFES 205
MISAY K++ KALELL+ MLR+ VRPN++TYS+VLR+C+ + +R LHCGIIK G ES
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLES 192
Query: 206 DVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMK 265
DVFVRSALID++AKLGE +A VF+EM T D +VWNSIIGGFAQNS D AL L+KRMK
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 266 RAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDLILNNALLDMYCKCGSLEDA 325
RAGF A+Q+TLTSVLRACTGLALLELG Q HVH++KYD DLILNNAL+DMYCKCGSLEDA
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDA 312
Query: 326 MSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHA 385
+ VF++M ++DVI+WSTMISGLAQNGYSQEALKLFE MK S KPNYITIVGVLFACSHA
Sbjct: 313 LRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 386 GFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRA 445
G +EDGW +F+SMKK YGIDP REHY CMIDLLG+AGKL +AVKL++EM EPDAVTWR
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 446 LLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGI 505
LLGAC+V RN LA AAKK++ LDP+D GTY LLSNIYANSQKWD V E+R MR RGI
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 506 TKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEG 565
KEPGCSWIEVNKQIHAF + D+SHPQI +++K L LI +L G+GY P+TN+VLQDLEG
Sbjct: 493 KKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEG 552
Query: 566 EQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRD 625
EQ EDS+++HSEKLA+ FGLM+L K IRIRKNLRICGDCH F KL +K+E ++IVIRD
Sbjct: 553 EQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRD 612
Query: 626 PIRYHHFQDGNCSCGDYW 643
PIRYHHFQDG CSCGDYW
Sbjct: 613 PIRYHHFQDGKCSCGDYW 630
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/582 (42%), Positives = 379/582 (65%), Gaps = 12/582 (2%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
+ AD Y L+K C + + ++VH H+L F + + N LLNM+ K LEEA+
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 130 VLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIF---MLREGVRPNMFTYSAVLRACD 186
+F++MP+R+ V+WTT+IS Y +D+ + L+F MLR G PN FT S+V++A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGY---SQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Query: 187 SL---IILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNS 243
+ QLH +K GF+S+V V SAL+D+Y + G + +A+ VF+ + +R+ V WN+
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 232
Query: 244 IIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYD 303
+I G A+ S ++AL L++ M R GF + S+ AC+ LE G VH +++K
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 304 HDLIL--NNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFE 361
L+ N LLDMY K GS+ DA +F R+ ++DV+SW+++++ AQ+G+ +EA+ FE
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 362 SMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRA 421
M+ I+PN I+ + VL ACSH+G +++GW++++ MKK GI P HY ++DLLGRA
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRA 411
Query: 422 GKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLS 481
G L A++ I EMP EP A W+ALL AC++H+NT+L AA+ + LDP DPG +++L
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 482 NIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLK 541
NIYA+ +W++ A VRK M+ G+ KEP CSW+E+ IH F D HPQ ++I + +
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 531
Query: 542 HLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLR 601
++ K+ +GY PDT++V+ ++ +++E ++QYHSEK+A+ F L++ G TI I+KN+R
Sbjct: 532 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 591
Query: 602 ICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+CGDCHT KL +K+ + I++RD R+HHF+DGNCSC DYW
Sbjct: 592 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 157/305 (51%), Gaps = 13/305 (4%)
Query: 52 QRDLP-RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETF 110
Q D P A+ + M G + T + +IK A +H + GF+
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 111 LVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG 170
+ + LL+++ ++ L+++AQ++FD + RN VSW +I+ + +KALEL MLR+G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 171 VRPNMFTYSAVLRACDSLIILRQ---LHCGIIKVGFESDVFVRSALIDIYAKLGELRNAE 227
RP+ F+Y+++ AC S L Q +H +IK G + F + L+D+YAK G + +A
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 228 CVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLA 287
+F+ + RD+V WNS++ +AQ+ EA+ ++ M+R G ++ + SVL AC+
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 288 LLELGTQVHVHVLKYDHDLILNNA-----LLDMYCKCGSLEDAMSVFSRM-IQKDVISWS 341
LL+ G + + K D I+ A ++D+ + G L A+ M I+ W
Sbjct: 378 LLDEGWHYYELMKK---DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 434
Query: 342 TMISG 346
+++
Sbjct: 435 ALLNA 439
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
+A++ M G R +YA L C + +E+ K VH +++ G + F N LL
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 117 NMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMF 176
+M+ K + +A+ +FD++ +R+VVSW ++++AY +A+ M R G+RPN
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 177 TYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTR 236
++ +VL AC H G++ G+ + E+ +
Sbjct: 365 SFLSVLTACS--------HSGLLDEGWH-------------------------YYELMKK 391
Query: 237 DLVV---WN--SIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLEL 291
D +V W+ +++ + D++ AL + M AA ++L AC EL
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA---IWKALLNACRMHKNTEL 448
Query: 292 GTQVHVHVLKYDHDLILNNALL-DMYCKCGSLEDAMSVFSRMIQKDV 337
G HV + D D + +L ++Y G DA V +M + V
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 495
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/570 (40%), Positives = 363/570 (63%), Gaps = 5/570 (0%)
Query: 79 ELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPER 138
E+++ C AV EAK H ++ E + L+N+L+N + K +E A+ +FD M ER
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 139 NVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACD---SLIILRQLH 195
++VSW TMI Y +M +AL++ + M EG + + FT S+VL AC + ++LH
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 196 CGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVD 255
C +K + +++V +AL+D+YAK G +++A VF M + V W+S++ G+ QN + +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 256 EALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNALL 313
EAL LY+R +R +Q TL+SV+ AC+ LA L G Q+H + K + ++ + ++ +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 314 DMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYI 373
DMY KCGSL ++ +FS + +K++ W+T+ISG A++ +E + LFE M+ + PN +
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 374 TIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHE 433
T +L C H G VE+G FK M+ YG+ P HYSCM+D+LGRAG L EA +LI
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 434 MPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEV 493
+P++P A W +LL +C+V++N +LA AA+K+ L+P++ G ++LLSNIYA +++W+E+
Sbjct: 426 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 485
Query: 494 AEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYA 553
A+ RK +R + K G SWI++ ++H F+V +S HP+I +I L +L+ K GY
Sbjct: 486 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYK 545
Query: 554 PDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLT 613
P + L D+E +KE+ + HSEKLA+VFGLM L + +RI KNLRIC DCH F K
Sbjct: 546 PSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAA 605
Query: 614 AKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ + I++RD R+HHF DG+CSCGD+W
Sbjct: 606 SMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 11/293 (3%)
Query: 40 SSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNH 99
++++ +TR R A+ M+ G + T + ++ C E K +H
Sbjct: 131 NTMIGLYTR---NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 100 VLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKA 159
+ + ++ LL+++ K ++++A +F+ M +++ V+W++M++ Y K ++A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 160 LELLIFMLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDI 216
L L R + N FT S+V+ AC +L L +Q+H I K GF S+VFV S+ +D+
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 217 YAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTL 276
YAK G LR + +F+E+ ++L +WN+II GFA+++ E + L+++M++ G ++ T
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF 367
Query: 277 TSVLRACTGLALLELGTQVHVHVLKYDHDLILN----NALLDMYCKCGSLEDA 325
+S+L C L+E G + +++ + L N + ++D+ + G L +A
Sbjct: 368 SSLLSVCGHTGLVEEGRRF-FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 73 DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLF 132
+ T + +I C A+ E K +H + GF F+ + ++M+ K L E+ ++F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 133 DQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR 192
++ E+N+ W T+IS + + + L M ++G+ PN T+S++L C
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG------ 375
Query: 193 QLHCGIIK------------VGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLV- 239
H G+++ G +V S ++DI + G L A + +P
Sbjct: 376 --HTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 240 VWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQ 273
+W S++ + +YK ++ A AA++
Sbjct: 434 IWGSLLA----------SCRVYKNLELAEVAAEK 457
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/595 (38%), Positives = 358/595 (60%), Gaps = 5/595 (0%)
Query: 54 DLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVN 113
DL + + MQ + + TY ++K C+ +E + +H+ ++ F+ ++ +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 114 ILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRP 173
+L++M+ K L+ A + + ++VVSWTTMI+ Y +DKAL ML G+R
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 174 NMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVF 230
+ + + AC L L+ Q+H GF SD+ ++AL+ +Y++ G++ + F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 231 NEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLE 290
+ D + WN+++ GF Q+ + +EAL ++ RM R G + T S ++A + A ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 291 LGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLA 348
G QVH + K YD + + NAL+ MY KCGS+ DA F + K+ +SW+ +I+ +
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 349 QNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGR 408
++G+ EAL F+ M S ++PN++T+VGVL ACSH G V+ G +F+SM YG+ P
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 409 EHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILN 468
EHY C++D+L RAG L A + I EMP +PDA+ WR LL AC VH+N ++ AA +L
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 469 LDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADS 528
L+P+D TY+LLSN+YA S+KWD R+ M+ +G+ KEPG SWIEV IH+F V D
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 529 SHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSL 588
+HP D+I+++ + L ++ +GY D +L +L+ EQK+ I HSEKLAI FGL+SL
Sbjct: 950 NHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSL 1009
Query: 589 TQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
I + KNLR+C DCH + K +K+ N+ I++RD R+HHF+ G CSC DYW
Sbjct: 1010 PATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 202/404 (50%), Gaps = 11/404 (2%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
+AM+ M G+ DS T A L+ C A + + +H + GF + LL
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 117 NMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIF--MLREGVRPN 174
N++ K + +E A F + NVV W M+ AY ++D IF M E + PN
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAY--GLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 175 MFTYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFN 231
+TY ++L+ C L + Q+H IIK F+ + +V S LID+YAKLG+L A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 232 EMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLEL 291
+D+V W ++I G+ Q + D+AL +++M G +D+ LT+ + AC GL L+
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 292 GTQVHVH--VLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQ 349
G Q+H V + DL NAL+ +Y +CG +E++ F + D I+W+ ++SG Q
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 350 NGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGRE 409
+G ++EAL++F M I N T + A S ++ G + K G D E
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK-TGYDSETE 728
Query: 410 HYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVH 453
+ +I + + G + +A K E+ + + V+W A++ A H
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 222/459 (48%), Gaps = 12/459 (2%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
A++ M G+ ++ ++ C ++E + +H VL GF +T++ N L+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 117 NMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMF 176
+++ L A+ +F M +R+ V++ T+I+ +KA+EL M +G+ P+
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 177 TYSAVLRACD---SLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
T ++++ AC +L +QLH K+GF S+ + AL+++YAK ++ A F E
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 234 PTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGT 293
++V+WN ++ + D+ + ++++M+ +Q T S+L+ C L LELG
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 294 QVHVHVLKYDHDL--ILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNG 351
Q+H ++K + L + + L+DMY K G L+ A + R KDV+SW+TMI+G Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 352 YSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHY 411
+ +AL F M I+ + + + + AC+ +++G + G
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQ 629
Query: 412 SCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDP 471
+ ++ L R GK++E+ L E D + W AL+ + N + A+ + +N +
Sbjct: 630 NALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR-MNREG 687
Query: 472 QDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPG 510
D + S + A S E A +++ + + + G
Sbjct: 688 IDNNNFTFGSAVKAAS----ETANMKQGKQVHAVITKTG 722
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 202/397 (50%), Gaps = 9/397 (2%)
Query: 60 KAMHAMQCHGVRADSVTYAELIKCCLARH-AVEEAKLVHNHVLSGGFEPETFLVNILLNM 118
K + +++ G+R + T L++ CL + +++E + +H+ +L G + L L +
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 119 HVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTY 178
++ L A +FD+MPER + +W MI + + L + M+ E V PN T+
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 179 SAVLRACD----SLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMP 234
S VL AC + ++ Q+H I+ G V + LID+Y++ G + A VF+ +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 235 TRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
+D W ++I G ++N EA+ L+ M G +SVL AC + LE+G Q
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 295 VHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGY 352
+H VLK + D + NAL+ +Y G+L A +FS M Q+D ++++T+I+GL+Q GY
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 353 SQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYS 412
++A++LF+ M + ++P+ T+ ++ ACS G + G K G +
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEG 428
Query: 413 CMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
+++L + ++ A+ E E + V W +L A
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 209/413 (50%), Gaps = 14/413 (3%)
Query: 65 MQCHGVRADSVTYAELIKCCLARH-AVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFS 123
M V + T++ +++ C A + + +H +L G T + N L++++ +
Sbjct: 177 MVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 236
Query: 124 LLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLR 183
++ A+ +FD + ++ SW MIS + +A+ L M G+ P + +S+VL
Sbjct: 237 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 184 AC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVV 240
AC +SL I QLH ++K+GF SD +V +AL+ +Y LG L +AE +F+ M RD V
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 241 WNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVL 300
+N++I G +Q ++A+ L+KRM G D +TL S++ AC+ L G Q+H +
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 301 K--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALK 358
K + + + ALL++Y KC +E A+ F ++V+ W+ M+ + + +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 359 LFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSC--MI 415
+F M++ I PN T +L C G +E G H + +K + ++ Y C +I
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLI 532
Query: 416 DLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILN 468
D+ + GKL A ++ + D V+W ++ + D A+ +++L+
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 154/328 (46%), Gaps = 16/328 (4%)
Query: 170 GVRPNMFTYSAVLRAC----DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRN 225
G+RPN T +L C SL R+LH I+K+G +S+ + L D Y G+L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 226 AECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTG 285
A VF+EMP R + WN +I A + + E L+ RM ++ T + VL AC G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 286 LAL-LELGTQVHVHVL--KYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWST 342
++ ++ Q+H +L ++ N L+D+Y + G ++ A VF + KD SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 343 MISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKF 401
MISGL++N EA++LF M V I P VL AC +E G H +K
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 402 YGIDPGREHYSC--MIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLA 459
+ D Y C ++ L G L A + M + DAVT+ L+ + A
Sbjct: 319 FSSDT----YVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKA 373
Query: 460 ICAAKKILNLDPQDPGTYILLSNIYANS 487
+ K+ ++LD +P + L S + A S
Sbjct: 374 MELFKR-MHLDGLEPDSNTLASLVVACS 400
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/594 (39%), Positives = 366/594 (61%), Gaps = 7/594 (1%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
R +A+ M G Y L+ CL + A+ + + VH H++ + P T+L LL
Sbjct: 35 RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLL 94
Query: 117 NMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMF 176
+ K LE+A+ + D+MPE+NVVSWT MIS Y + +AL + M+R +PN F
Sbjct: 95 IFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEF 154
Query: 177 TYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
T++ VL +C L + +Q+H I+K ++S +FV S+L+D+YAK G+++ A +F +
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECL 214
Query: 234 PTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGT 293
P RD+V +II G+AQ +EAL ++ R+ G + + T S+L A +GLALL+ G
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 294 QVHVHVLKYDHDL--ILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNG 351
Q H HVL+ + +L N+L+DMY KCG+L A +F M ++ ISW+ M+ G +++G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 352 YSQEALKLFESMK-VSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSM-KKFYGIDPGRE 409
+E L+LF M+ R+KP+ +T++ VL CSH + G N F M YG PG E
Sbjct: 335 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 410 HYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNL 469
HY C++D+LGRAG++ EA + I MP +P A +LLGAC+VH + D+ ++++ +
Sbjct: 395 HYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 454
Query: 470 DPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSS 529
+P++ G Y++LSN+YA++ +W +V VR M + +TKEPG SWI+ + +H F+ D +
Sbjct: 455 EPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRT 514
Query: 530 HPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLT 589
HP+ +++ +K + K+ GY PD + VL D++ EQKE + HSEKLA+ FGL++
Sbjct: 515 HPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATG 574
Query: 590 QGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+G IR+ KNLRIC DCH FAK+ +K+ + + +RD R+H DG CSCGDYW
Sbjct: 575 EGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/591 (40%), Positives = 365/591 (61%), Gaps = 6/591 (1%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A+ ++M+ + VR ++A +IK C + + +H V+ GF + + L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 118 MHVKFSLLEEAQVLFDQMP-ERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMF 176
+ K + + +A LF ++ NVVSWT MIS + ++A++L M R+GVRPN F
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 177 TYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTR 236
TYS +L A +I ++H ++K +E V +AL+D Y KLG++ A VF+ + +
Sbjct: 399 TYSVILTAL-PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 457
Query: 237 DLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGL-ALLELGTQV 295
D+V W++++ G+AQ + + A+ ++ + + G ++ T +S+L C A + G Q
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 296 HVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYS 353
H +K D L +++ALL MY K G++E A VF R +KD++SW++MISG AQ+G +
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577
Query: 354 QEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSC 413
+AL +F+ MK ++K + +T +GV AC+HAG VE+G +F M + I P +EH SC
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 637
Query: 414 MIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQD 473
M+DL RAG+L++A+K+I MP + WR +L AC+VH+ T+L AA+KI+ + P+D
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 474 PGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQI 533
Y+LLSN+YA S W E A+VRK M R + KEPG SWIEV + ++F D SHP
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLK 757
Query: 534 DKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKT 593
D+I L+ L +L +GY PDT+YVLQD++ E KE + HSE+LAI FGL++ +G
Sbjct: 758 DQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSP 817
Query: 594 IRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHF-QDGNCSCGDYW 643
+ I KNLR+CGDCH KL AK+E + IV+RD R+HHF DG CSCGD+W
Sbjct: 818 LLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 216/426 (50%), Gaps = 15/426 (3%)
Query: 41 SLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHV 100
SLL F+R ++ R +H + G+ D ++ ++K + +H
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRL---GMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 101 LSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKAL 160
+ GF + + L++ ++K S ++ + +FD+M ERNVV+WTT+IS Y MND+ L
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 161 ELLIFMLREGVRPNMFTYSAVLRA-CDSLIILR--QLHCGIIKVGFESDVFVRSALIDIY 217
L + M EG +PN FT++A L + + R Q+H ++K G + + V ++LI++Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 218 AKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLT 277
K G +R A +F++ + +V WNS+I G+A N EAL ++ M+ +S+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 278 SVLRACTGLALLELGTQVHVHVLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRM-IQ 334
SV++ C L L Q+H V+KY D + AL+ Y KC ++ DA+ +F +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 335 KDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNH 394
+V+SW+ MISG QN +EA+ LF MK ++PN T +L A + H
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVH 416
Query: 395 FKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHR 454
+ +K Y + + ++D + GK++EA K+ + + D V W A+L
Sbjct: 417 AQVVKTNY--ERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTG 473
Query: 455 NTDLAI 460
T+ AI
Sbjct: 474 ETEAAI 479
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 176/339 (51%), Gaps = 14/339 (4%)
Query: 120 VKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYS 179
V S L A LFD+ P R+ S+ +++ + +A L + + R G+ + +S
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 180 AVLRA----CDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPT 235
+VL+ CD L RQLHC IK GF DV V ++L+D Y K ++ VF+EM
Sbjct: 98 SVLKVSATLCDELF-GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 236 RDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQV 295
R++V W ++I G+A+NS DE L L+ RM+ G + T + L + G QV
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 296 HVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYS 353
H V+K D + ++N+L+++Y KCG++ A +F + K V++W++MISG A NG
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 354 QEALKLFESMKVSRIKPNYITIVGVLFACSHAG---FVEDGWNHFKSMKKFYGIDPGREH 410
EAL +F SM+++ ++ + + V+ C++ F E H +K YG +
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ--LHCSVVK--YGFLFDQNI 332
Query: 411 YSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
+ ++ + + +A++L E+ + V+W A++
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 367/593 (61%), Gaps = 6/593 (1%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
+ + M G+ D T + C + + VH+ + F E N LL
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 117 NMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMF 176
+M+ K L+ A+ +F +M +R+VVS+T+MI+ Y + +A++L M EG+ P+++
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 177 TYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
T +AVL C +L +++H I + D+FV +AL+D+YAK G ++ AE VF+EM
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 234 PTRDLVVWNSIIGGFAQNSDVDEALNLYKRM-KRAGFAADQSTLTSVLRACTGLALLELG 292
+D++ WN+IIGG+++N +EAL+L+ + + F+ D+ T+ VL AC L+ + G
Sbjct: 459 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Query: 293 TQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQN 350
++H ++++ Y D + N+L+DMY KCG+L A +F + KD++SW+ MI+G +
Sbjct: 519 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 578
Query: 351 GYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREH 410
G+ +EA+ LF M+ + I+ + I+ V +L+ACSH+G V++GW F M+ I+P EH
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 411 YSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLD 470
Y+C++D+L R G L +A + I MP PDA W ALL C++H + LA A+K+ L+
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 471 PQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSH 530
P++ G Y+L++NIYA ++KW++V +RK + RG+ K PGCSWIE+ +++ F DSS+
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 758
Query: 531 PQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQ 590
P+ + I L+ + +++ GY+P T Y L D E +KE+++ HSEKLA+ G++S
Sbjct: 759 PETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGH 818
Query: 591 GKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
GK IR+ KNLR+CGDCH AK +K+ + IV+RD R+H F+DG+CSC +W
Sbjct: 819 GKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 220/433 (50%), Gaps = 13/433 (3%)
Query: 24 TITPPVASCNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKC 83
T++ V S T R+ + RFC +L A+K + + D T +++
Sbjct: 46 TVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQL 103
Query: 84 CLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSW 143
C ++++ K V N + GF ++ L + L M+ L+EA +FD++ + W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 144 TTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIK 200
+++ + ++ L M+ GV + +T+S V ++ SL + QLH I+K
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 201 VGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNL 260
GF V ++L+ Y K + +A VF+EM RD++ WNSII G+ N ++ L++
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 261 YKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNALLDMYCK 318
+ +M +G D +T+ SV C L+ LG VH +K + + N LLDMY K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 319 CGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGV 378
CG L+ A +VF M + V+S+++MI+G A+ G + EA+KLFE M+ I P+ T+ V
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 379 LFACSHAGFVEDGWNHFKSMKKFYGIDPGREHY--SCMIDLLGRAGKLQEAVKLIHEMPY 436
L C+ +++G + +K+ D G + + + ++D+ + G +QEA + EM
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 437 EPDAVTWRALLGA 449
+ D ++W ++G
Sbjct: 461 K-DIISWNTIIGG 472
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/641 (40%), Positives = 383/641 (59%), Gaps = 27/641 (4%)
Query: 18 ARQ-FSLTITPPVASCNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVT 76
ARQ F P S NT+ + + F AM M+ G D T
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFA----------AMVLFKRMRKLGFEVDGFT 142
Query: 77 YAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMP 136
+ LI C R V+ K +H +SGGF+ + + N + + K LL EA +F M
Sbjct: 143 LSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 137 E-RNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC---DSLIILR 192
E R+ VSW +MI AY K KAL L M+ +G + +MFT ++VL A D LI R
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 193 QLHCGIIKVGFESDVFVRSALIDIYAKLGE---LRNAECVFNEMPTRDLVVWNSIIGGFA 249
Q H +IK GF + V S LID Y+K G + ++E VF E+ + DLVVWN++I G++
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 250 QNSDV-DEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKY---DHD 305
N ++ +EA+ +++M+R G D + V AC+ L+ Q+H +K +
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 306 LILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKV 365
+ +NNAL+ +Y K G+L+DA VF RM + + +S++ MI G AQ+G+ EAL L++ M
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 366 SRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQ 425
S I PN IT V VL AC+H G V++G +F +MK+ + I+P EHYSCMIDLLGRAGKL+
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 426 EAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYA 485
EA + I MPY+P +V W ALLGAC+ H+N LA AA +++ + P Y++L+N+YA
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYA 560
Query: 486 NSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQ 545
+++KW+E+A VRK+MR + I K+PGCSWIEV K+ H F D SHP I ++N++L+ +++
Sbjct: 561 DARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMK 620
Query: 546 KLVGVGYAPDTNYVLQDLEGEQKEDS---IQYHSEKLAIVFGLMSLTQGKTIRIRKNLRI 602
K+ VGY D + + + + D + +HSEKLA+ FGLMS G+ + + KNLRI
Sbjct: 621 KMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRI 680
Query: 603 CGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
CGDCH K + + + I++RD +R+H F+DG CSCGDYW
Sbjct: 681 CGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 215/414 (51%), Gaps = 28/414 (6%)
Query: 106 EPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIF 165
EP F N+++ + K S + A+ LFD++P+ + VS+ T+IS Y DA+ A+ L
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 166 MLREGVRPNMFTYSAVLRA-CDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELR 224
M + G + FT S ++ A CD + +++QLHC + GF+S V +A + Y+K G LR
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 225 NAECVFNEMPT-RDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRAC 283
A VF M RD V WNS+I + Q+ + +AL LYK M GF D TL SVL A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 284 TGLALLELGTQVHVHVLK--YDHDLILNNALLDMYCKCG---SLEDAMSVFSRMIQKDVI 338
T L L G Q H ++K + + + + L+D Y KCG + D+ VF ++ D++
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 339 SWSTMISGLAQN-GYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKS 397
W+TMISG + N S+EA+K F M+ +P+ + V V ACS+ +
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL-------SSPSQ 363
Query: 398 MKKFYGIDPGREHY--------SCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
K+ +G+ + H + +I L ++G LQ+A + MP E +AV++ ++
Sbjct: 364 CKQIHGLAI-KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKG 421
Query: 450 CKVHRNTDLAICAAKKILN--LDPQDPGTYILLSNIYANSQKWDEVAEVRKTMR 501
H + A+ +++L+ + P T++ + + A+ K DE E TM+
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKI-TFVAVLSACAHCGKVDEGQEYFNTMK 474
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/664 (35%), Positives = 380/664 (57%), Gaps = 51/664 (7%)
Query: 21 FSLTITPPVASCNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAEL 80
F +PPV + ++ R F Q +A+ + M+ G D + +
Sbjct: 62 FKTLKSPPVLAWKSVIRC----------FTDQSLFSKALASFVEMRASGRCPDHNVFPSV 111
Query: 81 IKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKF----------SLLEE--- 127
+K C + + VH ++ G + + + N L+NM+ K ++ +E
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQ 171
Query: 128 -----------------------AQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLI 164
+ +F+ MP ++VVS+ T+I+ Y + M + AL ++
Sbjct: 172 RTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVR 231
Query: 165 FMLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLG 221
M ++P+ FT S+VL + + +++H +I+ G +SDV++ S+L+D+YAK
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 291
Query: 222 ELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLR 281
+ ++E VF+ + RD + WNS++ G+ QN +EAL L+++M A +SV+
Sbjct: 292 RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351
Query: 282 ACTGLALLELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVIS 339
AC LA L LG Q+H +VL+ + ++ + +AL+DMY KCG+++ A +F RM D +S
Sbjct: 352 ACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS 411
Query: 340 WSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMK 399
W+ +I G A +G+ EA+ LFE MK +KPN + V VL ACSH G V++ W +F SM
Sbjct: 412 WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMT 471
Query: 400 KFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLA 459
K YG++ EHY+ + DLLGRAGKL+EA I +M EP W LL +C VH+N +LA
Sbjct: 472 KVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELA 531
Query: 460 ICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQ 519
A+KI +D ++ G Y+L+ N+YA++ +W E+A++R MR +G+ K+P CSWIE+ +
Sbjct: 532 EKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNK 591
Query: 520 IHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKL 579
H F D SHP +DKIN+ LK +++++ GY DT+ VL D++ E K + + HSE+L
Sbjct: 592 THGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERL 651
Query: 580 AIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSC 639
A+ FG+++ G TIR+ KN+RIC DCH K +K+ + I++RD R+HHF GNCSC
Sbjct: 652 AVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSC 711
Query: 640 GDYW 643
GDYW
Sbjct: 712 GDYW 715
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 195/383 (50%), Gaps = 45/383 (11%)
Query: 113 NILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVR 172
+I+++++ LL EA +LF + V++W ++I + D + KAL + M G
Sbjct: 43 SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC 102
Query: 173 PNMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKL---GELRNA 226
P+ + +VL++C ++ LR +H I+++G + D++ +AL+++YAKL G +
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 227 ECVFNEMPTR---------------------------------DLVVWNSIIGGFAQNSD 253
VF+EMP R D+V +N+II G+AQ+
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 254 VDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNA 311
++AL + + M D TL+SVL + + G ++H +V++ D D+ + ++
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 312 LLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPN 371
L+DMY K +ED+ VFSR+ +D ISW+++++G QNG EAL+LF M +++KP
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 372 YITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKL 430
+ V+ AC+H + G H ++ +G + S ++D+ + G ++ A K+
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKI 400
Query: 431 IHEMPYEPDAVTWRALLGACKVH 453
M D V+W A++ +H
Sbjct: 401 FDRMNV-LDEVSWTAIIMGHALH 422
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 43/297 (14%)
Query: 192 RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQN 251
+QLH I+ S S +I IY L L A +F + + ++ W S+I F
Sbjct: 25 KQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 252 SDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILN 309
S +AL + M+ +G D + SVL++CT + L G VH +++ D DL
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 310 NALLDMYCK---------CGSLEDAMS---------------------------VFSRMI 333
NAL++MY K G++ D M VF M
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 334 QKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACS-HAGFVEDGW 392
+KDV+S++T+I+G AQ+G ++AL++ M + +KP+ T+ VL S + ++
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 393 NHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
H ++K GID S ++D+ ++ +++++ ++ + Y D ++W +L+
Sbjct: 264 IHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAG 317
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 366/591 (61%), Gaps = 30/591 (5%)
Query: 75 VTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLV-----------------NILLN 117
V +++ + C+ + E LV + L GGF + +V N ++
Sbjct: 199 VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
+ + ++EA+ LFD+ P ++V +WT M+S Y +M ++A EL M N +
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVS 314
Query: 178 YSAVLRA---CDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMP 234
++A+L + + + ++L V +V + +I YA+ G++ A+ +F++MP
Sbjct: 315 WNAMLAGYVQGERMEMAKEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 235 TRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
RD V W ++I G++Q+ EAL L+ +M+R G ++S+ +S L C + LELG Q
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 295 VHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGY 352
+H ++K Y+ + NALL MYCKCGS+E+A +F M KD++SW+TMI+G +++G+
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 353 SQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYS 412
+ AL+ FESMK +KP+ T+V VL ACSH G V+ G +F +M + YG+ P +HY+
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 413 CMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQ 472
CM+DLLGRAG L++A L+ MP+EPDA W LLGA +VH NT+LA AA KI ++P+
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 610
Query: 473 DPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQ 532
+ G Y+LLSN+YA+S +W +V ++R MR +G+ K PG SWIE+ + H F+V D HP+
Sbjct: 611 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 670
Query: 533 IDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGK 592
D+I L+ L ++ GY T+ VL D+E E+KE ++YHSE+LA+ +G+M ++ G+
Sbjct: 671 KDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGR 730
Query: 593 TIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
IR+ KNLR+C DCH K A++ + I++RD R+HHF+DG+CSCGDYW
Sbjct: 731 PIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 56/339 (16%)
Query: 113 NILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVR 172
N +++ +++ E A+ LFD+MPER++VSW MI Y + KA EL M
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM------ 152
Query: 173 PNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNE 232
P E DV + ++ YA+ G + +A VF+
Sbjct: 153 P------------------------------ERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 233 MPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELG 292
MP ++ V WN+++ + QNS ++EA L+K + + L ++ + +
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 293 TQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGY 352
++V D++ N ++ Y + G +++A +F +DV +W+ M+SG QN
Sbjct: 243 DSMNV------RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 353 SQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGR--EH 410
+EA +LF+ M + N ++ +L AG+V+ + K+ + + P R
Sbjct: 297 VEEARELFDKMP----ERNEVSWNAML-----AGYVQG--ERMEMAKELFDVMPCRNVST 345
Query: 411 YSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
++ MI + GK+ EA L +MP + D V+W A++
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ M+ G R + +++ + C A+E K +H ++ GG+E F+ N LL
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K +EEA LF +M +++VSW TMI+ Y + AL M REG++P+ T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 178 YSAVLRACDSLIILRQLHCGIIKVGFE------SDVFV------RSALIDIYAKLGELRN 225
AVL AC H G++ G + D V + ++D+ + G L +
Sbjct: 513 MVAVLSACS--------HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 226 AECVFNEMPTR-DLVVWNSIIG 246
A + MP D +W +++G
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLG 586
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/588 (41%), Positives = 367/588 (62%), Gaps = 28/588 (4%)
Query: 68 HGVRA-DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGF-EPETFLVNILLNMHVKFSLL 125
HG+RA +++T+ L L + + ++++ H L EP+TF NI+L+ +V+
Sbjct: 85 HGMRAKNTITWNSL----LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNF 140
Query: 126 EEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC 185
E+AQ FD+MP ++ SW TMI+ Y +KA EL M+ + N +++A++
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISG- 195
Query: 186 DSLIILRQLHCG-------IIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMP-TRD 237
+ CG KV V +A+I Y K ++ AE +F +M ++
Sbjct: 196 -------YIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 238 LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHV 297
LV WN++I G+ +NS ++ L L++ M G + S L+S L C+ L+ L+LG Q+H
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 298 HVLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQE 355
V K +D+ +L+ MYCKCG L DA +F M +KDV++W+ MISG AQ+G + +
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 356 ALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMI 415
AL LF M ++I+P++IT V VL AC+HAG V G +F+SM + Y ++P +HY+CM+
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 416 DLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPG 475
DLLGRAGKL+EA+KLI MP+ P A + LLGAC+VH+N +LA AA+K+L L+ Q+
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAA 488
Query: 476 TYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDK 535
Y+ L+NIYA+ +W++VA VRK M+ + K PG SWIE+ ++H F +D HP++D
Sbjct: 489 GYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDS 548
Query: 536 INKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIR 595
I+K LK L +K+ GY P+ + L ++E EQKE + +HSEKLA+ FG + L QG I+
Sbjct: 549 IHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQ 608
Query: 596 IRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ KNLRICGDCH K +++E + I++RD R+HHF+DG+CSCGDYW
Sbjct: 609 VFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 55/294 (18%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
+K AM G+R +S + + C A++ + +H V + + L++
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K L +A LF+ M +++VV+W MIS Y DKAL L M+ +RP+ T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 178 YSAVLRACDSLIILRQLHCGIIKVG---FES---DVFVR------SALIDIYAKLGELRN 225
+ AVL AC+ H G++ +G FES D V + ++D+ + G+L
Sbjct: 388 FVAVLLACN--------HAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 226 AECVFNEMPTRD-LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACT 284
A + MP R V+ +++G A ++K ++ A FAA++
Sbjct: 440 ALKLIRSMPFRPHAAVFGTLLG----------ACRVHKNVELAEFAAEK----------- 478
Query: 285 GLALLELGTQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVI 338
LL+L +Q ++ L ++Y ED V RM + +V+
Sbjct: 479 ---LLQLNSQNAAGYVQ----------LANIYASKNRWEDVARVRKRMKESNVV 519
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/656 (37%), Positives = 388/656 (59%), Gaps = 25/656 (3%)
Query: 5 AVSKLKWTKPSSQARQFSLTITPPVASCNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHA 64
+VS+L T+ ++ + + V + + NS ++ D R D A+ A +
Sbjct: 12 SVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNS--VIADLAR---SGDSAEALLAFSS 66
Query: 65 MQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
M+ + ++ IK C + + K H G++ + F+ + L+ M+
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPN-----MFTYS 179
LE+A+ +FD++P+RN+VSWT+MI Y +N AL+ + V N MF S
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGY---DLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 180 ----AVLRACDSLI---ILRQLHCGIIKVGFESDVFVRSALIDIYAKLGE--LRNAECVF 230
+V+ AC + + +H +IK GF+ V V + L+D YAK GE + A +F
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 231 NEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRM-KRAGFAADQSTLTSVLRACTGLALL 289
+++ +D V +NSI+ +AQ+ +EA +++R+ K + TL++VL A + L
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 290 ELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGL 347
+G +H V++ + D+I+ +++DMYCKCG +E A F RM K+V SW+ MI+G
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 348 AQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPG 407
+G++ +AL+LF +M S ++PNYIT V VL ACSHAG +GW F +MK +G++PG
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 408 REHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKIL 467
EHY CM+DLLGRAG LQ+A LI M +PD++ W +LL AC++H+N +LA + ++
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 468 NLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVAD 527
LD + G Y+LLS+IYA++ +W +V VR M+ RG+ K PG S +E+N ++H F + D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 528 SSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMS 587
HPQ +KI + L L +KL+ GY +T+ V D++ E+KE +++ HSEKLAI FG+M+
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMN 603
Query: 588 LTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
G T+ + KNLR+C DCH KL +K+ ++ V+RD R+HHF+DG CSCGDYW
Sbjct: 604 TVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 355/585 (60%), Gaps = 6/585 (1%)
Query: 65 MQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
M+ G + T++ ++K + H + +H ++ GF + + N +L+ + K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRA 184
+ E ++LFD+MPE + VS+ +IS+Y A + +L M G F ++ +L
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 185 C---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVW 241
SL + RQLHC + +S + V ++L+D+YAK AE +F +P R V W
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420
Query: 242 NSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK 301
++I G+ Q L L+ +M+ + ADQST +VL+A A L LG Q+H +++
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480
Query: 302 YDH--DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKL 359
+ ++ + L+DMY KCGS++DA+ VF M ++ +SW+ +IS A NG + A+
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 360 FESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLG 419
F M S ++P+ ++I+GVL ACSH GFVE G +F++M YGI P ++HY+CM+DLLG
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 420 RAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDP-QDPGTYI 478
R G+ EA KL+ EMP+EPD + W ++L AC++H+N LA AA+K+ +++ +D Y+
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
Query: 479 LLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINK 538
+SNIYA + +W++V +V+K MR RGI K P SW+EVN +IH F+ D +HP D+I +
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVR 720
Query: 539 HLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRK 598
+ L ++ GY PDT+ V+QD++ + K +S++YHSE+LA+ F L+S +G I + K
Sbjct: 721 KINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMK 780
Query: 599 NLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
NLR C DCH KL +K+ + I +RD R+HHF +G CSCGDYW
Sbjct: 781 NLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 217/420 (51%), Gaps = 21/420 (5%)
Query: 73 DSVTYAELIKCC---LARHAVEEAKLVHNHVLSGGFEPETFLV--NILLNMHVKFSLLEE 127
D VT+ L+ C + ++AV + VH + GF+ FL N+LL + + L+
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQ---VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 128 AQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDS 187
A VLF+++PE++ V++ T+I+ Y + +++ L + M + G +P+ FT+S VL+A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 188 L---IILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSI 244
L + +QLH + GF D V + ++D Y+K + +F+EMP D V +N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 245 IGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDH 304
I ++Q + +L+ ++ M+ GF ++L L+ L++G Q+H L
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 305 DLILN--NALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFES 362
D IL+ N+L+DMY KC E+A +F + Q+ +SW+ +ISG Q G LKLF
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 363 MKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHY---SCMIDLLG 419
M+ S ++ + T VL A + + G K + F E+ S ++D+
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLG----KQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 420 RAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYIL 479
+ G +++AV++ EMP + +AV+W AL+ A + + + AI A K++ Q IL
Sbjct: 499 KCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 185/391 (47%), Gaps = 17/391 (4%)
Query: 69 GVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEA 128
G D+ +++ L R V A+ V++ + T N +++ HVK + A
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMP----HKNTVSTNTMISGHVKTGDVSSA 98
Query: 129 QVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG--VRPNMFTYSAVLRACD 186
+ LFD MP+R VV+WT ++ Y D+A +L M R P+ T++ +L C+
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 187 SLI---ILRQLHCGIIKVGFESDVF--VRSALIDIYAKLGELRNAECVFNEMPTRDLVVW 241
+ + Q+H +K+GF+++ F V + L+ Y ++ L A +F E+P +D V +
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 242 NSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK 301
N++I G+ ++ E+++L+ +M+++G T + VL+A GL LG Q+H +
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 302 --YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKL 359
+ D + N +LD Y K + + +F M + D +S++ +IS +Q + +L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 360 FESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSCMIDLL 418
F M+ +L ++ ++ G H +++ D + ++D+
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LATADSILHVGNSLVDMY 396
Query: 419 GRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
+ +EA + +P + V+W AL+
Sbjct: 397 AKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 41/296 (13%)
Query: 192 RQLHCGIIKVGFESDV----FV---------------------------RSALIDIYAKL 220
R++ IIK GF++D F+ + +I + K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 221 GELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAA--DQSTLTS 278
G++ +A +F+ MP R +V W ++G +A+NS DEA L+++M R+ D T T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 279 VLRACTGLALLELGTQVHVHVLKYDHD----LILNNALLDMYCKCGSLEDAMSVFSRMIQ 334
+L C QVH +K D L ++N LL YC+ L+ A +F + +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 335 KDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFA-CSHAGFVEDGWN 393
KD ++++T+I+G ++G E++ LF M+ S +P+ T GVL A F
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 394 HFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
H S+ + D + ++D + ++ E L EMP E D V++ ++ +
Sbjct: 273 HALSVTTGFSRDASVGNQ--ILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISS 325
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
+K M+ +RAD T+A ++K + ++ K +H ++ G F + L++
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K +++A +F++MP+RN VSW +ISA+ D + A+ M+ G++P+ +
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 178 YSAVLRACDSLIILRQLHCGIIKVGFE-----SDVFV-------RSALIDIYAKLGELRN 225
VL AC HCG ++ G E S ++ + ++D+ + G
Sbjct: 556 ILGVLTACS--------HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 226 AECVFNEMPTR-DLVVWNSIIGG 247
AE + +EMP D ++W+S++
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNA 630
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/586 (38%), Positives = 365/586 (62%), Gaps = 8/586 (1%)
Query: 65 MQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
MQ V DS T+ L+K C ++ + VH V GF+ + F+ N L+ ++ K
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 125 LEEAQVLFD--QMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVL 182
L A+ +F+ +PER +VSWT ++SAY +ALE+ M + V+P+ +VL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 183 RACDSLIILRQ---LHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLV 239
A L L+Q +H ++K+G E + + +L +YAK G++ A+ +F++M + +L+
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 240 VWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHV 299
+WN++I G+A+N EA++++ M D ++TS + AC + LE ++ +V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 300 LKYDH--DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEAL 357
+ D+ D+ +++AL+DM+ KCGS+E A VF R + +DV+ WS MI G +G ++EA+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 358 KLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDL 417
L+ +M+ + PN +T +G+L AC+H+G V +GW F M + I+P ++HY+C+IDL
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDL 468
Query: 418 LGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTY 477
LGRAG L +A ++I MP +P W ALL ACK HR+ +L AA+++ ++DP + G Y
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHY 528
Query: 478 ILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKIN 537
+ LSN+YA ++ WD VAEVR M+ +G+ K+ GCSW+EV ++ AF V D SHP+ ++I
Sbjct: 529 VQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIE 588
Query: 538 KHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIR 597
+ ++ + +L G+ + + L DL E+ E+++ HSE++AI +GL+S QG +RI
Sbjct: 589 RQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRIT 648
Query: 598 KNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
KNLR C +CH KL +K+ ++ IV+RD R+HHF+DG CSCGDYW
Sbjct: 649 KNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 208/404 (51%), Gaps = 23/404 (5%)
Query: 69 GVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEA 128
G+ +DS YA LI A H + K +H +L G + FL+ L++ F + A
Sbjct: 17 GIHSDSF-YASLIDS--ATHKAQ-LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 129 QVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSL 188
+ +FD +P + W +I Y AL + M V P+ FT+ +L+AC L
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 189 IIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFN--EMPTRDLVVWNS 243
L R +H + ++GF++DVFV++ LI +YAK L +A VF +P R +V W +
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 244 IIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKY- 302
I+ +AQN + EAL ++ +M++ D L SVL A T L L+ G +H V+K
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 303 ---DHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKL 359
+ DL++ +L MY KCG + A +F +M ++I W+ MISG A+NGY++EA+ +
Sbjct: 253 LEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 360 FESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHY---SCMID 416
F M ++P+ I+I + AC+ G +E +SM ++ G R+ S +ID
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGRSDYRDDVFISSALID 366
Query: 417 LLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAI 460
+ + G + E +L+ + + D V W A++ +H AI
Sbjct: 367 MFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 173/323 (53%), Gaps = 8/323 (2%)
Query: 170 GVRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECV 229
G+ + F Y++++ + L+Q+H ++ +G + F+ + LI + G++ A V
Sbjct: 17 GIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 230 FNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALL 289
F+++P + WN+II G+++N+ +AL +Y M+ A + D T +L+AC+GL+ L
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 290 ELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFS--RMIQKDVISWSTMIS 345
++G VH V + +D D+ + N L+ +Y KC L A +VF + ++ ++SW+ ++S
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 346 GLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGID 405
AQNG EAL++F M+ +KP+++ +V VL A + ++ G + S+ K G++
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM-GLE 254
Query: 406 PGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKK 465
+ + + + G++ A L +M P+ + W A++ + AI +
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 466 ILNLDPQDPGTYILLSNIYANSQ 488
++N D + P T + S I A +Q
Sbjct: 314 MINKDVR-PDTISITSAISACAQ 335
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 10/297 (3%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ M+ V+ D V ++ +++ + +H V+ G E E L+ L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K + A++LFD+M N++ W MIS Y +A+++ M+ + VRP+ +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 178 YSAVLRACDSLIILRQLHCGIIKVG---FESDVFVRSALIDIYAKLGELRNAECVFNEMP 234
++ + AC + L Q VG + DVF+ SALID++AK G + A VF+
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 235 TRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
RD+VVW+++I G+ + EA++LY+ M+R G + T +L AC ++ G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 295 VHVHVLKYDHDLILNN----ALLDMYCKCGSLEDAMSVFSRM-IQKDVISWSTMISG 346
+ DH + ++D+ + G L+ A V M +Q V W ++S
Sbjct: 446 FFNRMA--DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/579 (39%), Positives = 357/579 (61%), Gaps = 11/579 (1%)
Query: 76 TYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQM 135
TY LI CC R ++ +A VH H+L G + + FL L+ M+ ++ A+ +FD+
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 136 PERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC-------DSL 188
+R + W + A A ++ L L M R GV + FTY+ VL+AC + L
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 189 IILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGF 248
+ +++H + + G+ S V++ + L+D+YA+ G + A VF MP R++V W+++I +
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 249 AQNSDVDEALNLYKRMKR--AGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDL 306
A+N EAL ++ M R + + T+ SVL+AC LA LE G +H ++L+ D
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 307 ILN--NALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMK 364
IL +AL+ MY +CG LE VF RM +DV+SW+++IS +GY ++A+++FE M
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 365 VSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKL 424
+ P +T V VL ACSH G VE+G F++M + +GI P EHY+CM+DLLGRA +L
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRL 438
Query: 425 QEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIY 484
EA K++ +M EP W +LLG+C++H N +LA A++++ L+P++ G Y+LL++IY
Sbjct: 439 DEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIY 498
Query: 485 ANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLI 544
A +Q WDEV V+K + RG+ K PG W+EV +++++F D +P +++I+ L L
Sbjct: 499 AEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLA 558
Query: 545 QKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICG 604
+ + GY P T VL +LE E+KE + HSEKLA+ FGL++ ++G+ IRI KNLR+C
Sbjct: 559 EDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCE 618
Query: 605 DCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
DCH F K +K + I++RD R+H F++G CSCGDYW
Sbjct: 619 DCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 127/236 (53%), Gaps = 9/236 (3%)
Query: 69 GVRADSVTYAELIKCCLARHA----VEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
GV +D TY ++K C+A + + K +H H+ G+ +++ L++M+ +F
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLRE--GVRPNMFTYSAVL 182
++ A +F MP RNVVSW+ MI+ Y +AL M+RE PN T +VL
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 183 RACDSLIILRQ---LHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLV 239
+AC SL L Q +H I++ G +S + V SAL+ +Y + G+L + VF+ M RD+V
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Query: 240 VWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQV 295
WNS+I + + +A+ +++ M G + T SVL AC+ L+E G ++
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 73 DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLF 132
+SVT +++ C + A+E+ KL+H ++L G + +++ L+ M+ + LE Q +F
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 133 DQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR 192
D+M +R+VVSW ++IS+Y KA+++ ML G P T+ +VL AC
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS------ 397
Query: 193 QLHCGIIKVG---FES---------DVFVRSALIDIYAKLGELRNAECVFNEMPTR-DLV 239
H G+++ G FE+ + + ++D+ + L A + +M T
Sbjct: 398 --HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 240 VWNSIIGGFAQNSDVDEALNLYKRM 264
VW S++G + +V+ A +R+
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRL 480
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/588 (38%), Positives = 359/588 (61%), Gaps = 8/588 (1%)
Query: 62 MHAMQCHGVRADSVTYAELIKCCLA-RHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHV 120
M ++C G++ D T ++K + + +K VH H + ++F+ L++ +
Sbjct: 405 MQLLRC-GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 121 KFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSA 180
+ ++EA++LF++ ++V+W M++ Y + K L+L M ++G R + FT +
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 181 VLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRD 237
V + C L + +Q+H IK G++ D++V S ++D+Y K G++ A+ F+ +P D
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 238 LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHV 297
V W ++I G +N + + A +++ +M+ G D+ T+ ++ +A + L LE G Q+H
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 298 HVLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQE 355
+ LK + +D + +L+DMY KCGS++DA +F R+ ++ +W+ M+ GLAQ+G +E
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 356 ALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMI 415
L+LF+ MK IKP+ +T +GVL ACSH+G V + + H +SM YGI P EHYSC+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 416 DLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPG 475
D LGRAG +++A LI M E A +R LL AC+V +T+ A K+L L+P D
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 476 TYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDK 535
Y+LLSN+YA + KWDE+ R M+ + K+PG SWIEV +IH F V D S+ Q +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 536 INKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIR 595
I + +K +I+ + GY P+T++ L D+E E+KE ++ YHSEKLA+ FGL+S IR
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 596 IRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ KNLR+CGDCH K AK+ N+ IV+RD R+H F+DG CSCGDYW
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 225/442 (50%), Gaps = 17/442 (3%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
V D VT+ ++ + ++ + VH L G + + N L+NM+ K A+
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 130 VLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDS-- 187
+FD M ER+++SW ++I+ + +A+ L + +LR G++P+ +T ++VL+A S
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 188 --LIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSII 245
L + +Q+H IK+ SD FV +ALID Y++ ++ AE +F E DLV WN+++
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMM 489
Query: 246 GGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YD 303
G+ Q+ D + L L+ M + G +D TL +V + C L + G QVH + +K YD
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 304 HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESM 363
DL +++ +LDMY KCG + A F + D ++W+TMISG +NG + A +F M
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 364 KVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSCMIDLLGRAG 422
++ + P+ TI + A S +E G H ++K DP + ++D+ + G
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCG 667
Query: 423 KLQEAVKLIHEMPYEPDAVTWRALLGACKVHRN--TDLAICAAKKILNLDPQDPGTYILL 480
+ +A L + + W A+L H L + K L + P D T+I +
Sbjct: 668 SIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP-DKVTFIGV 725
Query: 481 SNIYANSQKWDEVAEVRKTMRA 502
+ ++S V+E K MR+
Sbjct: 726 LSACSHSGL---VSEAYKHMRS 744
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 34/341 (9%)
Query: 54 DLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVN 113
D + +K M G R+D T A + K C A+ + K VH + + G++ + ++ +
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 114 ILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRP 173
+L+M+VK + AQ FD +P + V+WTTMIS + ++A + M GV P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 174 NMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVF 230
+ FT + + +A L L RQ+H +K+ +D FV ++L+D+YAK G + +A C+F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 231 NEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLE 290
+ ++ WN+++ G AQ+ + E L L+K+MK G D+ T VL AC+ L+
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 291 LGTQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQN 350
+ H+ + D+ I+ ++ +S + L +
Sbjct: 737 EAYK-HMRSMHGDYG---------------------------IKPEIEHYSCLADALGRA 768
Query: 351 GYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDG 391
G ++A L ESM + Y T+ L AC G E G
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTL---LAACRVQGDTETG 806
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 182/406 (44%), Gaps = 41/406 (10%)
Query: 50 CYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPET 109
C ++ +A ++ V +T + ++K CL V ++ H + G + +
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 110 FLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLRE 169
F+ L+N+++KF ++E +VLF++MP R+VV W M+ AY + ++A++L
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 170 GVRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECV 229
G+ PN T + R G +SD G++++
Sbjct: 241 GLNPNEITLRLLARIS----------------GDDSDA-------------GQVKSFANG 271
Query: 230 FNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALL 289
+ +++ N + + + L + M + DQ T +L + L
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 290 ELGTQVHVHVLKYDHDLIL--NNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGL 347
LG QVH LK DL+L +N+L++MYCK A +VF M ++D+ISW+++I+G+
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 348 AQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSH--AGFVEDGWNHFKSMKKFYGID 405
AQNG EA+ LF + +KP+ T+ VL A S G H ++K I+
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK----IN 447
Query: 406 PGREHY--SCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
+ + + +ID R ++EA L + D V W A++
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAG 491
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 31/265 (11%)
Query: 93 AKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAY-- 150
K H +L+ PE FL+N L++M+ K L A+ +FD+MP+R++VSW ++++AY
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 151 ---CDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILRQLHCGII-------- 199
C + +A L + ++ V + T S +L+ C LH G +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC--------LHSGYVWASESFHG 169
Query: 200 ---KVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDE 256
K+G + D FV AL++IY K G+++ + +F EMP RD+V+WN ++ + + +E
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 257 ALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYD----HDLILNNAL 312
A++L +G ++ TL + R + + G QV D ++I N
Sbjct: 230 AIDLSSAFHSSGLNPNEITLRLLARISGDDS--DAG-QVKSFANGNDASSVSEIIFRNKG 286
Query: 313 LDMYCKCGSLEDAMSVFSRMIQKDV 337
L Y G + F+ M++ DV
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDV 311
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 188 LIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGG 247
L++ + H I+ + F+ + LI +Y+K G L A VF++MP RDLV WNSI+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 248 FAQNSD-----VDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK- 301
+AQ+S+ + +A L++ +++ + TL+ +L+ C + H + K
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 302 -YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLF 360
D D + AL+++Y K G +++ +F M +DV+ W+ M+ + G+ +EA+ L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 361 ESMKVSRIKPNYITI 375
+ S + PN IT+
Sbjct: 235 SAFHSSGLNPNEITL 249
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Query: 289 LELGTQVHVHVLKYDHD---LILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMIS 345
L LG H +L ++ + ++NN L+ MY KCGSL A VF +M +D++SW+++++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINN-LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 346 GLAQNGYS-----QEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGW--NHFKSM 398
AQ+ Q+A LF ++ + + +T+ +L C H+G+V W F
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFHGY 170
Query: 399 KKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
G+D ++++ + GK++E L EMPY D V W +L A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/603 (39%), Positives = 368/603 (61%), Gaps = 33/603 (5%)
Query: 55 LPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVE--EAKLVHNHVLSGGFEPETFLV 112
LP K ++ +Q +GV S+T I RH V +A+L + + +LV
Sbjct: 12 LPMVEKCINLLQTYGV--SSITKLRQIHAFSIRHGVSISDAELGKHLIF--------YLV 61
Query: 113 NI-----LLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFML 167
++ + H FS +E+ NV W T+I Y + + A L M
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPI---------NVFIWNTLIRGYAEIGNSISAFSLYREMR 112
Query: 168 REG-VRPNMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGEL 223
G V P+ TY +++A ++ +R +H +I+ GF S ++V+++L+ +YA G++
Sbjct: 113 VSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDV 172
Query: 224 RNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRAC 283
+A VF++MP +DLV WNS+I GFA+N +EAL LY M G D T+ S+L AC
Sbjct: 173 ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 232
Query: 284 TGLALLELGTQVHVHVLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWS 341
+ L LG +VHV+++K +L +N LLD+Y +CG +E+A ++F M+ K+ +SW+
Sbjct: 233 AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 342 TMISGLAQNGYSQEALKLFESMKVSR-IKPNYITIVGVLFACSHAGFVEDGWNHFKSMKK 400
++I GLA NG+ +EA++LF+ M+ + + P IT VG+L+ACSH G V++G+ +F+ M++
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 401 FYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAI 460
Y I+P EH+ CM+DLL RAG++++A + I MP +P+ V WR LLGAC VH ++DLA
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 461 CAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQI 520
A +IL L+P G Y+LLSN+YA+ Q+W +V ++RK M G+ K PG S +EV ++
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRV 472
Query: 521 HAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLA 580
H F + D SHPQ D I LK + +L GY P + V D+E E+KE+++ YHSEK+A
Sbjct: 473 HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532
Query: 581 IVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCG 640
I F L+S + I + KNLR+C DCH KL +K+ N+ IV+RD R+HHF++G+CSC
Sbjct: 533 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQ 592
Query: 641 DYW 643
DYW
Sbjct: 593 DYW 595
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/668 (36%), Positives = 386/668 (57%), Gaps = 43/668 (6%)
Query: 14 PSSQARQFSLTITPPVASCNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRAD 73
P + +++++ + N + N+ F D A+K M G+ +
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTM-----FRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 74 SVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEA----- 128
S T+ ++K C A +E + +H HVL G + + ++ L++M+V+ LE+A
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 129 --------------------------QVLFDQMPERNVVSWTTMISAYCDAKMNDKALEL 162
Q LFD++P ++VVSW MIS Y + +ALEL
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 163 LIFMLREGVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAK 219
M++ VRP+ T V+ AC S+ + RQ+H I GF S++ + +ALID+Y+K
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
Query: 220 LGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSV 279
GEL A +F +P +D++ WN++IGG+ + EAL L++ M R+G + T+ S+
Sbjct: 314 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 280 LRACTGLALLELGTQVHVHVLKYDHDLI----LNNALLDMYCKCGSLEDAMSVFSRMIQK 335
L AC L +++G +HV++ K + L +L+DMY KCG +E A VF+ ++ K
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 336 DVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHF 395
+ SW+ MI G A +G + + LF M+ I+P+ IT VG+L ACSH+G ++ G + F
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 493
Query: 396 KSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRN 455
++M + Y + P EHY CMIDLLG +G +EA ++I+ M EPD V W +LL ACK+H N
Sbjct: 494 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Query: 456 TDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIE 515
+L A+ ++ ++P++PG+Y+LLSNIYA++ +W+EVA+ R + +G+ K PGCS IE
Sbjct: 554 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
Query: 516 VNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYH 575
++ +H F + D HP+ +I L+ + L G+ PDT+ VLQ++E E KE ++++H
Sbjct: 614 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHH 673
Query: 576 SEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDG 635
SEKLAI FGL+S G + I KNLR+C +CH KL +K+ + I+ RD R+HHF+DG
Sbjct: 674 SEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDG 733
Query: 636 NCSCGDYW 643
CSC DYW
Sbjct: 734 VCSCNDYW 741
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 251/516 (48%), Gaps = 69/516 (13%)
Query: 31 SCNTITRNSSSLLDDFTRFCYQRDLPR-------AMKAMHAMQCHGVRADSVTYAELIKC 83
SC+ +T SSS F D P ++ +H C +++ + +A++IK
Sbjct: 4 SCSPLTVPSSSY--PFHFLPSSSDPPYDSIRNHPSLSLLH--NCKTLQSLRIIHAQMIKI 59
Query: 84 CLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSW 143
L +KL+ +LS FE + +++ F + E N++ W
Sbjct: 60 GLHNTNYALSKLIEFCILSPHFEGLPYAISV-----------------FKTIQEPNLLIW 102
Query: 144 TTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR---QLHCGIIK 200
TM + + AL+L + M+ G+ PN +T+ VL++C + Q+H ++K
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 201 VGFESDVFVRSALIDIYAKLGEL-------------------------------RNAECV 229
+G + D++V ++LI +Y + G L NA+ +
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 230 FNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALL 289
F+E+P +D+V WN++I G+A+ + EAL L+K M + D+ST+ +V+ AC +
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 290 ELGTQVHVHV--LKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGL 347
ELG QVH+ + + +L + NAL+D+Y KCG LE A +F R+ KDVISW+T+I G
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 348 AQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDG-WNHFKSMKKFYGIDP 406
+EAL LF+ M S PN +T++ +L AC+H G ++ G W H K+ G+
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 407 GREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLA--ICAAK 464
+ +ID+ + G ++ A ++ + + ++ +W A++ +H D + + +
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 465 KILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTM 500
+ + + P D T++ L + ++S D + +TM
Sbjct: 462 RKIGIQPDDI-TFVGLLSACSHSGMLDLGRHIFRTM 496
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/602 (37%), Positives = 368/602 (61%), Gaps = 8/602 (1%)
Query: 50 CYQRD--LPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEP 107
CY + ++K + M+ G ++ T+ +K + A + AK VH +L +
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 108 ETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFML 167
+ + LL ++ + + +A +F++MP+ +VV W+ MI+ +C ++A++L I M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 168 REGVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELR 224
V PN FT S++L C + QLH ++KVGF+ D++V +ALID+YAK ++
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 225 NAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACT 284
A +F E+ +++ V WN++I G+ + +A ++++ R + + T +S L AC
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 285 GLALLELGTQVHVHVLKYDH--DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWST 342
LA ++LG QVH +K ++ + ++N+L+DMY KCG ++ A SVF+ M DV SW+
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520
Query: 343 MISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFY 402
+ISG + +G ++AL++ + MK KPN +T +GVL CS+AG ++ G F+SM + +
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 403 GIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICA 462
GI+P EHY+CM+ LLGR+G+L +A+KLI +PYEP + WRA+L A N + A +
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRS 640
Query: 463 AKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHA 522
A++IL ++P+D TY+L+SN+YA +++W VA +RK+M+ G+ KEPG SWIE +H
Sbjct: 641 AEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHY 700
Query: 523 FNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIV 582
F+V S HP + IN L+ L K GY PD N VL D++ E+K+ + HSE+LA+
Sbjct: 701 FSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760
Query: 583 FGLMSLTQGKT-IRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGD 641
+GL+ + + I I KNLRIC DCH+ K+ + + + +VIRD R+HHF G CSCGD
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820
Query: 642 YW 643
+W
Sbjct: 821 HW 822
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 194/380 (51%), Gaps = 11/380 (2%)
Query: 73 DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLF 132
DS Y +++ C+ ++ AK +H +L G + F NILLN +VK ++A LF
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 133 DQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG--VRPNMFT-YSAVLRACDSLI 189
D+MPERN VS+ T+ Y + L + REG + P++FT + + + D
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 190 ILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFA 249
I LH I+K+G++S+ FV +ALI+ Y+ G + +A VF + +D+VVW I+ +
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 250 QNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLI 307
+N +++L L M+ AGF + T + L+A GL + VH +LK Y D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 308 LNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSR 367
+ LL +Y + G + DA VF+ M + DV+ WS MI+ QNG+ EA+ LF M+ +
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 368 IKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEA 427
+ PN T+ +L C+ G + G D + +ID+ + K+ A
Sbjct: 344 VVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 428 VKLIHEMPYEPDAVTWRALL 447
VKL E+ + V+W ++
Sbjct: 403 VKLFAELS-SKNEVSWNTVI 421
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 11/332 (3%)
Query: 47 TRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFE 106
RFC A+ M+ V + T + ++ C + +H V+ GF+
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 107 PETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFM 166
+ ++ N L++++ K ++ A LF ++ +N VSW T+I Y + KA +
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 167 LREGVRPNMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGEL 223
LR V T+S+ L AC SL + Q+H IK V V ++LID+YAK G++
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 224 RNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRAC 283
+ A+ VFNEM T D+ WN++I G++ + +AL + MK + T VL C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 284 TGLALLELGTQVHVHVLKYDHD----LILNNALLDMYCKCGSLEDAMSVFSRM-IQKDVI 338
+ L++ G + +++ DH L ++ + + G L+ AM + + + V+
Sbjct: 561 SNAGLIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 339 SWSTMISGLAQNGYSQEALKLFESMKVSRIKP 370
W M+S A + E + ++ +I P
Sbjct: 620 IWRAMLS--ASMNQNNEEFARRSAEEILKINP 649
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/658 (36%), Positives = 370/658 (56%), Gaps = 71/658 (10%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
+A++ M M G+ T ++ A +E K VH+ ++ G + N LL
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 117 NM-------------------------------HVKFSLLEEAQVLFDQMPERNVVSWTT 145
NM H++ ++ A F+QM ER++V+W +
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 146 MISAYCDAKMNDKALELLIFMLREGV-RPNMFTYSAVLRAC---DSLIILRQLHCGIIKV 201
MIS + + +AL++ MLR+ + P+ FT ++VL AC + L I +Q+H I+
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 202 GFESDVFVRSALIDIYA---------------------------------KLGELRNAEC 228
GF+ V +ALI +Y+ KLG++ A+
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 229 VFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLAL 288
+F + RD+V W ++I G+ Q+ EA+NL++ M G + TL ++L + LA
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 289 LELGTQVHVHVLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRM-IQKDVISWSTMIS 345
L G Q+H +K + + ++NAL+ MY K G++ A F + ++D +SW++MI
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 346 GLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGID 405
LAQ+G+++EAL+LFE+M + ++P++IT VGV AC+HAG V G +F MK I
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 406 PGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKK 465
P HY+CM+DL GRAG LQEA + I +MP EPD VTW +LL AC+VH+N DL AA++
Sbjct: 549 PTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAER 608
Query: 466 ILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNV 525
+L L+P++ G Y L+N+Y+ KW+E A++RK+M+ + KE G SWIEV ++H F V
Sbjct: 609 LLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGV 668
Query: 526 ADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGL 585
D +HP+ ++I +K + ++ +GY PDT VL DLE E KE +++HSEKLAI FGL
Sbjct: 669 EDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGL 728
Query: 586 MSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+S T+RI KNLR+C DCHT K +K+ + I++RD R+HHF+DG CSC DYW
Sbjct: 729 ISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 211/476 (44%), Gaps = 116/476 (24%)
Query: 93 AKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMP---------------- 136
A+LVH V+ G +L+N L+N++ K A+ LFD+MP
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 137 ---------------ERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAV 181
+R+ VSWTTMI Y + KA+ ++ M++EG+ P FT + V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 182 LRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFN------- 231
L + + + +++H I+K+G +V V ++L+++YAK G+ A+ VF+
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 232 ------------------------EMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRA 267
+M RD+V WNS+I GF Q AL+++ +M R
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 268 G-FAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDL--ILNNALLDMYCKCGSLE- 323
+ D+ TL SVL AC L L +G Q+H H++ D+ I+ NAL+ MY +CG +E
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 324 --------------------------------DAMSVFSRMIQKDVISWSTMISGLAQNG 351
A ++F + +DV++W+ MI G Q+G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 352 YSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYG--IDPGRE 409
EA+ LF SM +PN T+ +L S + G K+ +G + G E
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG-------KQIHGSAVKSG-E 444
Query: 410 HYS-----CMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAI 460
YS +I + +AG + A + + E D V+W +++ A H + + A+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 177/417 (42%), Gaps = 110/417 (26%)
Query: 160 LELLIFMLREGVRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAK 219
LEL +L++ V + ++A L +HC +IK G V++ + L+++Y+K
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQL-----------VHCRVIKSGLMFSVYLMNNLMNVYSK 61
Query: 220 LGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVD------------------------ 255
G +A +F+EMP R WN+++ +++ D+D
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 256 -------EALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYD--HDL 306
+A+ + M + G Q TLT+VL + +E G +VH ++K ++
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 307 ILNNALLDMYCKC-------------------------------GSLEDAMSVFSRMIQK 335
++N+LL+MY KC G ++ AM+ F +M ++
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 336 DVISWSTMISGLAQNGYSQEALKLFESM-KVSRIKPNYITIVGVLFACS----------- 383
D+++W++MISG Q GY AL +F M + S + P+ T+ VL AC+
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 384 HAGFVEDGW-------NHFKSM-KKFYGIDPGR-------------EHYSCMIDLLGRAG 422
H+ V G+ N SM + G++ R E ++ ++D + G
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 423 KLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYIL 479
+ +A + + + D V W A++ + H + AI + ++ Q P +Y L
Sbjct: 362 DMNQAKNIFVSLK-DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTL 416
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 275 TLTSVLRACTGLALLELGTQ--------VHVHVLKYD--HDLILNNALLDMYCKCGSLED 324
+L+++L CT L + VH V+K + L N L+++Y K G
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 325 AMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESM 363
A +F M + SW+T++S ++ G + F+ +
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/584 (38%), Positives = 358/584 (61%), Gaps = 8/584 (1%)
Query: 68 HGVRA-DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLE 126
+G+RA DSVT L+ C +H++ + G E E F+ N L++++ +F L
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 127 EAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTY---SAVLR 183
+ Q +FD+M R+++SW ++I AY + +A+ L M ++P+ T +++L
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 184 ACDSLIILRQLHCGIIKVG-FESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWN 242
+ R + ++ G F D+ + +A++ +YAKLG + +A VFN +P D++ WN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 243 SIIGGFAQNSDVDEALNLYKRMKRAG-FAADQSTLTSVLRACTGLALLELGTQVHVHVLK 301
+II G+AQN EA+ +Y M+ G AA+Q T SVL AC+ L G ++H +LK
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 302 YDH--DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKL 359
D+ + +L DMY KCG LEDA+S+F ++ + + + W+T+I+ +G+ ++A+ L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 360 FESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLG 419
F+ M +KP++IT V +L ACSH+G V++G F+ M+ YGI P +HY CM+D+ G
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 420 RAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYIL 479
RAG+L+ A+K I M +PDA W ALL AC+VH N DL A++ + ++P+ G ++L
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 480 LSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKH 539
LSN+YA++ KW+ V E+R +G+ K PG S +EV+ ++ F + +HP +++ +
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 540 LKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKN 599
L L KL +GY PD +VLQD+E ++KE + HSE+LAI F L++ TIRI KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 600 LRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
LR+CGDCH+ K +K+ + I++RD R+HHF++G CSCGDYW
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 242/462 (52%), Gaps = 27/462 (5%)
Query: 65 MQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
M G+ D T+ ++K C V + +H L GF + ++ L++++ ++
Sbjct: 144 MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRP-NMFTYSAVLR 183
+ A++LFD+MP R++ SW MIS YC + +AL L G+R + T ++L
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLS 255
Query: 184 ACDSLIILRQ---LHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVV 240
AC + +H IK G ES++FV + LID+YA+ G LR+ + VF+ M RDL+
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 241 WNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVL 300
WNSII + N A++L++ M+ + D TL S+ + L + V L
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 301 K---YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEAL 357
+ + D+ + NA++ MY K G ++ A +VF+ + DVISW+T+ISG AQNG++ EA+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 358 KLFESM-KVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSCMI 415
+++ M + I N T V VL ACS AG + G H + +K +D + +
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV--VTSLA 493
Query: 416 DLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILN--LDPQD 473
D+ G+ G+L++A+ L +++P ++V W L+ H + + A+ K++L+ + P D
Sbjct: 494 DMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-D 551
Query: 474 PGTYILLSNIYANSQKWDEVAEVRKTMRA-RGIT---KEPGC 511
T++ L + ++S DE + M+ GIT K GC
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 159/275 (57%), Gaps = 7/275 (2%)
Query: 115 LLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELL-IFMLREGVRP 173
L+N++ + A+ FD + R+V +W MIS Y A + + + +FML G+ P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 174 NMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
+ T+ +VL+AC ++I ++HC +K GF DV+V ++LI +Y++ + NA +F+EM
Sbjct: 152 DYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 234 PTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGT 293
P RD+ WN++I G+ Q+ + EAL L ++ A D T+ S+L ACT G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGV 267
Query: 294 QVHVHVLKY--DHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNG 351
+H + +K+ + +L ++N L+D+Y + G L D VF RM +D+ISW+++I N
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 352 YSQEALKLFESMKVSRIKPNYITIVGVLFACSHAG 386
A+ LF+ M++SRI+P+ +T++ + S G
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 166/335 (49%), Gaps = 21/335 (6%)
Query: 181 VLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVV 240
+ R C +L + LH ++ +V + + L+++Y LG + A F+ + RD+
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 241 WNSIIGGFAQNSDVDEALNLYKR-MKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHV 299
WN +I G+ + + E + + M +G D T SVL+AC + G ++H
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLA 176
Query: 300 LKYDH--DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEAL 357
LK+ D+ + +L+ +Y + ++ +A +F M +D+ SW+ MISG Q+G ++EAL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 358 KLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSCMID 416
L ++ + +T+V +L AC+ AG G H S+K +G++ + +ID
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK--HGLESELFVSNKLID 290
Query: 417 LLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKI-LNLDPQDPG 475
L G+L++ K+ M Y D ++W +++ A +++ AI +++ L+ D
Sbjct: 291 LYAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 476 TYILLSNIYANSQKWDEVAEVRKTMRARGITKEPG 510
T I L++I + ++ ++R +G T G
Sbjct: 350 TLISLASILS------QLGDIRACRSVQGFTLRKG 378
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/632 (36%), Positives = 364/632 (57%), Gaps = 41/632 (6%)
Query: 49 FCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPE 108
C Q+ L A++ + + + + TY LI+ C A+EE K VH H+ + GF P
Sbjct: 64 LCGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPG 119
Query: 109 TFLVNILLNMHVK-------------------------------FSLLEEAQVLFDQMPE 137
+ N LL M+ K LLEEA+ LFD+M E
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 138 RNVVSWTTMISAYCDAKMNDKALELLIFMLR-EGVRPNMFTYSAVLRACDSLIILR---Q 193
++ SWT M++ Y ++AL L M R RPN+FT S + A ++ +R +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 194 LHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSD 253
+H I++ G +SD + S+L+D+Y K G + A +F+++ +D+V W S+I + ++S
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 254 VDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNA 311
E +L+ + + ++ T VL AC L ELG QVH ++ + +D +++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 312 LLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPN 371
L+DMY KCG++E A V + D++SW+++I G AQNG EALK F+ + S KP+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 372 YITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLI 431
++T V VL AC+HAG VE G F S+ + + + +HY+C++DLL R+G+ ++ +I
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 432 HEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWD 491
EMP +P W ++LG C + N DLA AA+++ ++P++P TY+ ++NIYA + KW+
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 492 EVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVG 551
E ++RK M+ G+TK PG SW E+ ++ H F AD+SHP ++I + L+ L +K+ G
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Query: 552 YAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAK 611
Y P T+ VL D+E EQKE+++ YHSEKLA+ F ++S +G I++ KNLR C DCH K
Sbjct: 600 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 659
Query: 612 LTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ + + I +RD R+H F++G CSCGDYW
Sbjct: 660 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/593 (39%), Positives = 344/593 (58%), Gaps = 37/593 (6%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
+K M VR D T+ ++K C + + +H G F+ N L++
Sbjct: 124 GVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVS 183
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K L EA+++ D+M R+VVSW +++ Y + D ALE+ M + + T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 178 YSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRD 237
+++L A + E+ ++V+ D++ K+G+ +
Sbjct: 244 MASLLPAVSNTTT-------------ENVMYVK----DMFFKMGK-------------KS 273
Query: 238 LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHV 297
LV WN +IG + +N+ EA+ LY RM+ GF D ++TSVL AC + L LG ++H
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 298 HV--LKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQE 355
++ K +L+L NAL+DMY KCG LE A VF M +DV+SW+ MIS +G +
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 356 ALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMI 415
A+ LF ++ S + P+ I V L ACSHAG +E+G + FK M Y I P EH +CM+
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 416 DLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPG 475
DLLGRAGK++EA + I +M EP+ W ALLGAC+VH +TD+ + AA K+ L P+ G
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513
Query: 476 TYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDK 535
Y+LLSNIYA + +W+EV +R M+++G+ K PG S +EVN+ IH F V D SHPQ D+
Sbjct: 514 YYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDE 573
Query: 536 INKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQ----- 590
I + L L++K+ +GY PD+ L D+E E KE + HSEKLAIVF LM+ +
Sbjct: 574 IYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDS 633
Query: 591 GKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
TIRI KNLRICGDCH AKL +++ ++ I+IRD R+H F+ G CSCGDYW
Sbjct: 634 NNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 48/365 (13%)
Query: 94 KLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDA 153
+ VH+ ++ + L L+ + + A+ +FD++PERNV+ MI +Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 154 KMNDKALELLIFMLREGVRPNMFTYSAVLRACD---SLIILRQLHCGIIKVGFESDVFVR 210
+ +++ M VRP+ +T+ VL+AC +++I R++H KVG S +FV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 211 SALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFA 270
+ L+ +Y K G L A V +EM RD+V WNS++ G+AQN D+AL + + M+ +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 271 ADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFS 330
D T+ S+L A + + MY K +F
Sbjct: 239 HDAGTMASLLPAVSNTTTENV-----------------------MYVK--------DMFF 267
Query: 331 RMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVED 390
+M +K ++SW+ MI +N EA++L+ M+ +P+ ++I VL AC +
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 391 GWNHFKSMKKFYG------IDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWR 444
G KK +G + P + +ID+ + G L++A + M D V+W
Sbjct: 328 G-------KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWT 379
Query: 445 ALLGA 449
A++ A
Sbjct: 380 AMISA 384
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 18/286 (6%)
Query: 175 MFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMP 234
+F VL + LR +H II + + L+ YA L ++ +A VF+E+P
Sbjct: 42 VFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 235 TRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
R++++ N +I + N E + ++ M D T VL+AC+ + +G +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 295 VHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGY 352
+H K L + N L+ MY KCG L +A V M ++DV+SW++++ G AQN
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 353 SQEALKLFESMKVSRIKPNYITIVGVLFACSHAG-----FVEDGWNHFKSMKKFYGIDPG 407
+AL++ M+ +I + T+ +L A S+ +V+D + FK KK
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF--FKMGKK------S 273
Query: 408 REHYSCMIDLLGRAGKLQEAVKLIHEMP---YEPDAVTWRALLGAC 450
++ MI + + EAV+L M +EPDAV+ ++L AC
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 349/591 (59%), Gaps = 6/591 (1%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ + +M ++ +T ++ A + K +H + + GF+ + L++
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K LE A+ LFD M ERNVVSW +MI AY + +A+ + ML EGV+P +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 178 YSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMP 234
L AC L L R +H +++G + +V V ++LI +Y K E+ A +F ++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 235 TRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
+R LV WN++I GFAQN +ALN + +M+ D T SV+ A L++
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 295 VHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGY 352
+H V++ D ++ + AL+DMY KCG++ A +F M ++ V +W+ MI G +G+
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 353 SQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYS 412
+ AL+LFE M+ IKPN +T + V+ ACSH+G VE G F MK+ Y I+ +HY
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579
Query: 413 CMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQ 472
M+DLLGRAG+L EA I +MP +P + A+LGAC++H+N + A AA+++ L+P
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639
Query: 473 DPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQ 532
D G ++LL+NIY + W++V +VR +M +G+ K PGCS +E+ ++H+F ++HP
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699
Query: 533 IDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGK 592
KI L+ LI + GY PDTN VL +E + KE + HSEKLAI FGL++ T G
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGT 758
Query: 593 TIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
TI +RKNLR+C DCH K + + + IV+RD R+HHF++G CSCGDYW
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 215/411 (52%), Gaps = 9/411 (2%)
Query: 49 FCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPE 108
F DL +A++ M+ V + L+K C + K +H ++ GF +
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169
Query: 109 TFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLR 168
F + L NM+ K + EA+ +FD+MPER++VSW T+++ Y M ALE++ M
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 169 EGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRN 225
E ++P+ T +VL A +L ++ +++H ++ GF+S V + +AL+D+YAK G L
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 226 AECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTG 285
A +F+ M R++V WNS+I + QN + EA+ ++++M G ++ L AC
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 286 LALLELGTQVH-VHV-LKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTM 343
L LE G +H + V L D ++ + N+L+ MYCKC ++ A S+F ++ + ++SW+ M
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 344 ISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDG-WNHFKSMKKFY 402
I G AQNG +AL F M+ +KP+ T V V+ A + W H M+
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS-- 467
Query: 403 GIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVH 453
+D + ++D+ + G + A +LI +M E TW A++ H
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 198/375 (52%), Gaps = 8/375 (2%)
Query: 89 AVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMIS 148
+++E + + V G E F L+++ ++ ++EA +F+ + + V + TM+
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 149 AYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACD---SLIILRQLHCGIIKVGFES 205
+ DKAL+ + M + V P ++ ++ +L+ C L + +++H ++K GF
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 206 DVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMK 265
D+F + L ++YAK ++ A VF+ MP RDLV WN+I+ G++QN AL + K M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 266 RAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDLILN--NALLDMYCKCGSLE 323
T+ SVL A + L L+ +G ++H + ++ D ++N AL+DMY KCGSLE
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 324 DAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACS 383
A +F M++++V+SW++MI QN +EA+ +F+ M +KP ++++G L AC+
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 384 HAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTW 443
G +E G + G+D + +I + + ++ A + ++ V+W
Sbjct: 349 DLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT-LVSW 406
Query: 444 RAL-LGACKVHRNTD 457
A+ LG + R D
Sbjct: 407 NAMILGFAQNGRPID 421
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 170/313 (54%), Gaps = 10/313 (3%)
Query: 168 REGVRPNMFTYSA--VLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRN 225
R + N++ + A +L C SL LRQ+ + K G + F ++ L+ ++ + G +
Sbjct: 28 RNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 226 AECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTG 285
A VF + ++ V++++++ GFA+ SD+D+AL + RM+ T +L+ C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 286 LALLELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTM 343
A L +G ++H ++K + DL L +MY KC + +A VF RM ++D++SW+T+
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 344 ISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFY 402
++G +QNG ++ AL++ +SM +KP++ITIV VL A S + G H +M+
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-- 265
Query: 403 GIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICA 462
G D + ++D+ + G L+ A +L M E + V+W +++ A + N A+
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 463 AKKILN--LDPQD 473
+K+L+ + P D
Sbjct: 325 FQKMLDEGVKPTD 337
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 358/627 (57%), Gaps = 52/627 (8%)
Query: 69 GVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEA 128
G R D++T ++ C + K +H ++ F+ N L++M+ K +++EA
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 129 QVLFDQMPERNVVSWTTMISAYC------DA-----KMNDKALELLIF------------ 165
+F M ++VVSW M++ Y DA KM ++ +++ +
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 166 ------------MLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKV-------GF 203
ML G++PN T +VL C S+ L +++HC IK G
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 204 ESDVFVRSALIDIYAKLGELRNAECVFNEMPT--RDLVVWNSIIGGFAQNSDVDEALNLY 261
+ V + LID+YAK ++ A +F+ + RD+V W +IGG++Q+ D ++AL L
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 262 KRM--KRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHD---LILNNALLDMY 316
M + + T++ L AC LA L +G Q+H + L+ + L ++N L+DMY
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 317 CKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIV 376
KCGS+ DA VF M+ K+ ++W+++++G +GY +EAL +F+ M+ K + +T++
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 377 GVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPY 436
VL+ACSH+G ++ G +F MK +G+ PG EHY+C++DLLGRAG+L A++LI EMP
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 437 EPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEV 496
EP V W A L C++H +L AA+KI L G+Y LLSN+YAN+ +W +V +
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 497 RKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDT 556
R MR +G+ K PGCSW+E K F V D +HP +I + L +Q++ +GY P+T
Sbjct: 704 RSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 557 NYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKM 616
+ L D++ E+K+D + HSEKLA+ +G+++ QG IRI KNLR+CGDCHT +++
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 823
Query: 617 ENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ I++RD R+HHF++G+CSC YW
Sbjct: 824 IDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 208/434 (47%), Gaps = 55/434 (12%)
Query: 73 DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLF 132
D+ T+ + K C +V + H L GF F+ N L+ M+ + L +A+ +F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 133 DQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLRE-GVRPNMFTYSAVLRACDSL--- 188
D+M +VVSW ++I +Y ALE+ M E G RP+ T VL C SL
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 189 IILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGF 248
+ +QLHC + ++FV + L+D+YAK G + A VF+ M +D+V WN+++ G+
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 249 AQNSDVDEALNLYKRMKR-----------------------------------AGFAADQ 273
+Q ++A+ L+++M+ +G ++
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 274 STLTSVLRACTGLALLELGTQVHVHVLKYDHDLILN---------NALLDMYCKCGSLED 324
TL SVL C + L G ++H + +KY DL N N L+DMY KC ++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 325 AMSVFSRMI--QKDVISWSTMISGLAQNGYSQEALKLFESM--KVSRIKPNYITIVGVLF 380
A ++F + ++DV++W+ MI G +Q+G + +AL+L M + + +PN TI L
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 381 ACSHAGFVEDGWN-HFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPD 439
AC+ + G H +++ P +C+ID+ + G + +A +L+ + +
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA-RLVFDNMMAKN 543
Query: 440 AVTWRALLGACKVH 453
VTW +L+ +H
Sbjct: 544 EVTWTSLMTGYGMH 557
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 205/435 (47%), Gaps = 55/435 (12%)
Query: 90 VEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMP--ERNVVSWTTMI 147
+ + KL+H +LS G L + L++ ++ L A L + P + V W ++I
Sbjct: 41 ISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 148 SAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR---QLHCGIIKVGFE 204
+Y D +K L L M P+ +T+ V +AC + +R H + GF
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 205 SDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRM 264
S+VFV +AL+ +Y++ L +A VF+EM D+V WNSII +A+ AL ++ RM
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 265 KRA-GFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYD--HDLILNNALLDMYCKCGS 321
G D TL +VL C L LG Q+H + + ++ + N L+DMY KCG
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 322 LEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMK----------------- 364
+++A +VFS M KDV+SW+ M++G +Q G ++A++LFE M+
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 365 ------------------VSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKKFYGID 405
S IKPN +T++ VL C+ G + G H ++K Y ID
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPID 397
Query: 406 PGREHY-------SCMIDLLGRAGKLQEAVKLIHEM-PYEPDAVTWRALLGACKVHRNTD 457
+ + + +ID+ + K+ A + + P E D VTW ++G H + +
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 458 LAICAAKKILNLDPQ 472
A+ ++ D Q
Sbjct: 458 KALELLSEMFEEDCQ 472
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 21/302 (6%)
Query: 171 VRPNMFTYSA------VLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELR 224
++ ++F+ SA + C ++ ++ +H ++ G + + + S LI Y +G L
Sbjct: 18 IKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLS 76
Query: 225 NAECVFNEMPTRDLVV--WNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRA 282
+A + P D V WNS+I + N ++ L L+ M + D T V +A
Sbjct: 77 HAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKA 136
Query: 283 CTGLALLELGTQVHVH--VLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISW 340
C ++ + G H V + ++ + NAL+ MY +C SL DA VF M DV+SW
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSW 196
Query: 341 STMISGLAQNGYSQEALKLFESMKVS-RIKPNYITIVGVLFACSHAGFVEDGWNHFKSMK 399
+++I A+ G + AL++F M +P+ IT+V VL C+ G G K +
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG----KQLH 252
Query: 400 KFYGIDPGREHY---SCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALL-GACKVHRN 455
F ++ +C++D+ + G + EA + M + D V+W A++ G ++ R
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRF 311
Query: 456 TD 457
D
Sbjct: 312 ED 313
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/617 (37%), Positives = 342/617 (55%), Gaps = 7/617 (1%)
Query: 34 TITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEA 93
T RN S + A+ M+ GV + T+ K +
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 94 KLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDA 153
K +H + G + F+ +M+ K L ++A+ LFD++PERN+ +W IS
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 154 KMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDVFVR 210
+A+E I R PN T+ A L AC + L QLH +++ GF++DV V
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 211 SALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFA 270
+ LID Y K ++R++E +F EM T++ V W S++ + QN + ++A LY R ++
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 271 ADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSV 328
++SVL AC G+A LELG +H H +K + + + +AL+DMY KCG +ED+
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 329 FSRMIQKDVISWSTMISGLAQNGYSQEALKLFESM--KVSRIKPNYITIVGVLFACSHAG 386
F M +K++++ +++I G A G AL LFE M + PNY+T V +L ACS AG
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 387 FVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRAL 446
VE+G F SM+ YGI+PG EHYSC++D+LGRAG ++ A + I +MP +P W AL
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Query: 447 LGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGIT 506
AC++H L + AA+ + LDP+D G ++LLSN +A + +W E VR+ ++ GI
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 547
Query: 507 KEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGE 566
K G SWI V Q+HAF D SH +I L L ++ GY PD L DLE E
Sbjct: 548 KGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEE 607
Query: 567 QKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDP 626
+K + +HSEKLA+ FGL+SL IRI KNLRICGDCH+F K + + I++RD
Sbjct: 608 EKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDN 667
Query: 627 IRYHHFQDGNCSCGDYW 643
R+H F+DG CSC DYW
Sbjct: 668 NRFHRFKDGICSCKDYW 684
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 193/394 (48%), Gaps = 22/394 (5%)
Query: 80 LIKCCLARHAVEEAKLVHNHVLSG-GFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPER 138
L+K ++ ++ ++VH ++ P FL N L+NM+ K E A+++ P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 139 NVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSL---IILRQLH 195
NVVSWT++IS AL M REGV PN FT+ +A SL + +Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 196 CGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVD 255
+K G DVFV + D+Y K +A +F+E+P R+L WN+ I +
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 256 EALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNALL 313
EA+ + +R + T + L AC+ L LG Q+H VL+ +D D+ + N L+
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 314 DMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYI 373
D Y KC + + +F+ M K+ +SW ++++ QN ++A L+ + ++ +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 374 TIVGVLFACSHAGFVEDGWN-HFKSMKK------FYGIDPGREHYSCMIDLLGRAGKLQE 426
I VL AC+ +E G + H ++K F G S ++D+ G+ G +++
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG--------SALVDMYGKCGCIED 363
Query: 427 AVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAI 460
+ + EMP E + VT +L+G D+A+
Sbjct: 364 SEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMAL 396
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/694 (36%), Positives = 380/694 (54%), Gaps = 88/694 (12%)
Query: 28 PVASCNTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLAR 87
PV +T+ N+ T F + D A+ M+ G + D+ T+A ++ LA
Sbjct: 107 PVCMRDTVMYNAM-----ITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL-AGLAL 160
Query: 88 HAVEEAKLVHNHV--LSGGFEPETFLVNILLNMHVKF----SLLEEAQVLFDQMPERNVV 141
A +E + V H L G T + N L++++ K SLL A+ +FD++ E++
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDER 220
Query: 142 SWTTM--------------------------------ISAYCDAKMNDKALELLIFMLRE 169
SWTTM IS Y + +ALE++ M+
Sbjct: 221 SWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS 280
Query: 170 GVRPNMFTYSAVLRACDSLIIL---RQLHCGIIK---VGFESDVFVRSALIDIYAKLGEL 223
G+ + FTY +V+RAC + +L +Q+H +++ F D ++L+ +Y K G+
Sbjct: 281 GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKF 336
Query: 224 RNAECVFNEMPTRDLVVWNSIIGGF-------------------------------AQNS 252
A +F +MP +DLV WN+++ G+ A+N
Sbjct: 337 DEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENG 396
Query: 253 DVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNN 310
+E L L+ MKR GF + +++C L G Q H +LK +D L N
Sbjct: 397 FGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGN 456
Query: 311 ALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKP 370
AL+ MY KCG +E+A VF M D +SW+ +I+ L Q+G+ EA+ ++E M I+P
Sbjct: 457 ALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRP 516
Query: 371 NYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKL 430
+ IT++ VL ACSHAG V+ G +F SM+ Y I PG +HY+ +IDLL R+GK +A +
Sbjct: 517 DRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESV 576
Query: 431 IHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKW 490
I +P++P A W ALL C+VH N +L I AA K+ L P+ GTY+LLSN++A + +W
Sbjct: 577 IESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQW 636
Query: 491 DEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGV 550
+EVA VRK MR RG+ KE CSWIE+ Q+H F V D+SHP+ + + +L+ L +++ +
Sbjct: 637 EEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRL 696
Query: 551 GYAPDTNYVLQDLEGE-QKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTF 609
GY PDT++VL D+E + KED + HSEK+A+ FGLM L G TIRI KNLR CGDCH F
Sbjct: 697 GYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNF 756
Query: 610 AKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ + + + I++RD R+HHF++G CSCG++W
Sbjct: 757 FRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 229/505 (45%), Gaps = 109/505 (21%)
Query: 70 VRADSVTYAELIKCCLA--RHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEE 127
VRA + YA ++ CL R +++ A+ VH ++++ GF+P ++N L++++ K S L
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 128 AQVLFDQMPERNVVSWTTMISAYC--------------------DAKM-----------N 156
A+ LFD++ E + ++ TTM+S YC D M N
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 157 D--KALELLIFMLREGVRPNMFTYSAVLRA----CDSLIILRQLHCGIIKVGFESDVFVR 210
D A+ L M EG +P+ FT+++VL D Q H +K G V
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVS 187
Query: 211 SALIDIYAKLGE----LRNAECVFNEMPTRD----------------------------- 237
+AL+ +Y+K L +A VF+E+ +D
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 238 ---LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
LV +N++I G+ EAL + +RM +G D+ T SV+RAC LL+LG Q
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 295 VHVHVLKY-DHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWST----------- 342
VH +VL+ D +N+L+ +Y KCG ++A ++F +M KD++SW+
Sbjct: 308 VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 343 --------------------MISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFAC 382
MISGLA+NG+ +E LKLF MK +P G + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 383 SHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVT 442
+ G +G + + K G D + +I + + G ++EA ++ MP D+V+
Sbjct: 428 AVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVS 485
Query: 443 WRALLGACKVHRNTDLAICAAKKIL 467
W AL+ A H + A+ +++L
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEML 510
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/617 (35%), Positives = 367/617 (59%), Gaps = 19/617 (3%)
Query: 46 FTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVL-SGG 104
+ C L A++ + M GV D T + ++ C + K +H + L +G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 105 FEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLI 164
+ +F+ + L++M+ + + +FD M +R + W MI+ Y + + +AL L I
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 165 FMLRE-GVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKL 220
M G+ N T + V+ AC + +H ++K G + D FV++ L+D+Y++L
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 221 GELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMK-----------RAGF 269
G++ A +F +M RDLV WN++I G+ + ++AL L +M+ R
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 270 AADQSTLTSVLRACTGLALLELGTQVHVHVLKYD--HDLILNNALLDMYCKCGSLEDAMS 327
+ TL ++L +C L+ L G ++H + +K + D+ + +AL+DMY KCG L+ +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 328 VFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGF 387
VF ++ QK+VI+W+ +I +G QEA+ L M V +KPN +T + V ACSH+G
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 388 VEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPD-AVTWRAL 446
V++G F MK YG++P +HY+C++DLLGRAG+++EA +L++ MP + + A W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 447 LGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGIT 506
LGA ++H N ++ AA+ ++ L+P Y+LL+NIY+++ WD+ EVR+ M+ +G+
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 507 KEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGE 566
KEPGCSWIE ++H F DSSHPQ +K++ +L+ L +++ GY PDT+ VL ++E +
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813
Query: 567 QKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDP 626
+KE + HSEKLAI FG+++ + G IR+ KNLR+C DCH K +K+ ++ I++RD
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873
Query: 627 IRYHHFQDGNCSCGDYW 643
R+H F++G CSCGDYW
Sbjct: 874 RRFHRFKNGTCSCGDYW 890
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 219/414 (52%), Gaps = 16/414 (3%)
Query: 69 GVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLV-NILLNMHVKFSLLEE 127
G++ D+ + L+K +E K +H HV G+ ++ V N L+N++ K
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 128 AQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC-- 185
+FD++ ERN VSW ++IS+ C + + ALE ML E V P+ FT +V+ AC
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 186 ----DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVW 241
+ L++ +Q+H ++ G E + F+ + L+ +Y KLG+L +++ + RDLV W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 242 NSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK 301
N+++ QN + EAL + M G D+ T++SVL AC+ L +L G ++H + LK
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 302 ---YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALK 358
D + + +AL+DMYC C + VF M + + W+ MI+G +QN + +EAL
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 359 LFESMKVSR-IKPNYITIVGVLFACSHAG-FVEDGWNHFKSMKKFYGIDPGREHYSCMID 416
LF M+ S + N T+ GV+ AC +G F H +K+ G+D R + ++D
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR--GLDRDRFVQNTLMD 448
Query: 417 LLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLD 470
+ R GK+ A+++ +M + D VTW ++ + + A+ K+ NL+
Sbjct: 449 MYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 241 WNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVL 300
W ++ +++ + EA+ Y M G D ++L+A L +ELG Q+H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 301 KYDH---DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEAL 357
K+ + + + N L+++Y KCG VF R+ +++ +SW+++IS L + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 358 KLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREH---YSCM 414
+ F M ++P+ T+V V+ ACS+ E G K + YG+ G + + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHA-YGLRKGELNSFIINTL 242
Query: 415 IDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
+ + G+ GKL + L+ D VTW +L +
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/604 (36%), Positives = 345/604 (57%), Gaps = 35/604 (5%)
Query: 75 VTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQ 134
VT ++K + V K +H V+ GFE + + LL M+ + +A+ +F
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 135 MPERNVV------------------------------SWTTMISAYCDAKMNDKALELLI 164
+ +RN V SW MI + +A+E
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 165 FMLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLG 221
M +G++ + + + +VL AC L + +Q+H II+ F+ ++V SALID+Y K
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 222 ELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLR 281
L A+ VF+ M +++V W +++ G+ Q +EA+ ++ M+R+G D TL +
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 282 ACTGLALLELGTQVHVHVLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVIS 339
AC ++ LE G+Q H + H + ++N+L+ +Y KCG ++D+ +F+ M +D +S
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 340 WSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMK 399
W+ M+S AQ G + E ++LF+ M +KP+ +T+ GV+ ACS AG VE G +FK M
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 400 KFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLA 459
YGI P HYSCMIDL R+G+L+EA++ I+ MP+ PDA+ W LL AC+ N ++
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Query: 460 ICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQ 519
AA+ ++ LDP P Y LLS+IYA+ KWD VA++R+ MR + + KEPG SWI+ +
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGK 619
Query: 520 IHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKL 579
+H+F+ D S P +D+I L+ L K++ GY PDT++V D+E K + YHSE+L
Sbjct: 620 LHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERL 679
Query: 580 AIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSC 639
AI FGL+ + G+ IR+ KNLR+C DCH K + + + I++RD +R+H F+DG CSC
Sbjct: 680 AIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSC 739
Query: 640 GDYW 643
GD+W
Sbjct: 740 GDFW 743
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 201/386 (52%), Gaps = 50/386 (12%)
Query: 106 EPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIF 165
+P F N LL + K L+ E + F+++P+R+ V+W +I Y + + A++
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 166 MLREG----VRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLG 221
M+R+ R + T + + + + +Q+H +IK+GFES + V S L+ +YA +G
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 222 ELRNAECVFNEMPTRDLVVWNSIIG------------------------------GFAQN 251
+ +A+ VF + R+ V++NS++G G AQN
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 252 SDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILN 309
EA+ ++ MK G DQ SVL AC GL + G Q+H +++ + + +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 310 NALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIK 369
+AL+DMYCKC L A +VF RM QK+V+SW+ M+ G Q G ++EA+K+F M+ S I
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 370 PNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYG--IDPGREHY----SCMIDLLGRAGK 423
P++ T+ + AC++ +E+G +F+G I G HY + ++ L G+ G
Sbjct: 369 PDHYTLGQAISACANVSSLEEG-------SQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 424 LQEAVKLIHEMPYEPDAVTWRALLGA 449
+ ++ +L +EM DAV+W A++ A
Sbjct: 422 IDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 159/302 (52%), Gaps = 9/302 (2%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ M+ G++ D + ++ C A+ E K +H ++ F+ ++ + L++
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K L A+ +FD+M ++NVVSWT M+ Y ++A+++ + M R G+ P+ +T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 178 YSAVLRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMP 234
+ AC ++ L Q H I G V V ++L+ +Y K G++ ++ +FNEM
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 235 TRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQ 294
RD V W +++ +AQ E + L+ +M + G D TLT V+ AC+ L+E G Q
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-Q 492
Query: 295 VHVHVLKYDHDLILN----NALLDMYCKCGSLEDAMSVFSRM-IQKDVISWSTMISGLAQ 349
+ ++ ++ ++ + + ++D++ + G LE+AM + M D I W+T++S
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 350 NG 351
G
Sbjct: 553 KG 554
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 68/267 (25%)
Query: 191 LRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNS------- 243
++ +H II+ + F+ + ++ YA + A VF+ +P +L WN+
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 244 ------------------------IIGGFAQNSDVDEALNLYKRMKRAGFAAD--QSTLT 277
+I G++ + V A+ Y M R F+A+ + TL
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTRVTLM 143
Query: 278 SVLRACTGLALLELGTQVHVHVLKY---------------------------------DH 304
++L+ + + LG Q+H V+K D
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 305 DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMK 364
+ ++ N+L+ CG +EDA+ +F R ++KD +SW+ MI GLAQNG ++EA++ F MK
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 365 VSRIKPNYITIVGVLFACSHAGFVEDG 391
V +K + VL AC G + +G
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEG 289
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/604 (37%), Positives = 363/604 (60%), Gaps = 16/604 (2%)
Query: 48 RFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEP 107
RF Y+R +H++ A+ + +K C++ +E +L+H V+
Sbjct: 13 RFLYRRRFLSQSSFVHSLD-----ANVSSLIAAVKSCVS---IELCRLLHCKVVKSVSYR 64
Query: 108 ETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFML 167
F+ + L+ +++ A+ LFD+MPER++VSW ++IS Y K E+L M+
Sbjct: 65 HGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMM 124
Query: 168 --REGVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGE 222
G RPN T+ +++ AC S R +H ++K G +V V +A I+ Y K G+
Sbjct: 125 ISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGD 184
Query: 223 LRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRA 282
L ++ +F ++ ++LV WN++I QN ++ L + +R G DQ+T +VLR+
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRS 244
Query: 283 CTGLALLELGTQVHVHVL--KYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISW 340
C + ++ L +H ++ + + + ALLD+Y K G LED+ +VF + D ++W
Sbjct: 245 CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAW 304
Query: 341 STMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKK 400
+ M++ A +G+ ++A+K FE M I P+++T +L ACSH+G VE+G ++F++M K
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 401 FYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAI 460
Y IDP +HYSCM+DLLGR+G LQ+A LI EMP EP + W ALLGAC+V+++T L
Sbjct: 365 RYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT 424
Query: 461 CAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQI 520
AA+++ L+P+D Y++LSNIY+ S W + + +R M+ +G+ + GCS+IE +I
Sbjct: 425 KAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKI 484
Query: 521 HAFNVADSSHPQIDKINKHLKHLIQKLVG-VGYAPDTNYVLQDLEGEQKEDSIQYHSEKL 579
H F V D SHP+ +KI K LK + +K+ +GY T +VL D+ + KE+ I HSEK+
Sbjct: 485 HKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKI 544
Query: 580 AIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSC 639
A+ FGL+ ++ + I IRKNLRICGDCH AK + +E + I+IRD R+HHF DG+CSC
Sbjct: 545 AMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSC 604
Query: 640 GDYW 643
DYW
Sbjct: 605 SDYW 608
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/609 (37%), Positives = 352/609 (57%), Gaps = 17/609 (2%)
Query: 50 CYQRDLPR-AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPE 108
C Q PR A++ M G +D T + + C + K +H+ + G +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 109 TFLVNILLNMHVKFSL---LEEAQVLFDQMPERNVVSWTTMISAYC-DAKMNDKALELLI 164
L++M+ K S +++ + +FD+M + +V+SWT +I+ Y + + +A+ L
Sbjct: 304 VECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 165 FMLREG-VRPNMFTYSAVLRACDSLI---ILRQLHCGIIKVGFESDVFVRSALIDIYAKL 220
M+ +G V PN FT+S+ +AC +L + +Q+ K G S+ V +++I ++ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 221 GELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVL 280
+ +A+ F + ++LV +N+ + G +N + ++A L + T S+L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 281 RACTGLALLELGTQVHVHVLKY--DHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVI 338
+ + G Q+H V+K + + NAL+ MY KCGS++ A VF+ M ++VI
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 339 SWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSM 398
SW++MI+G A++G++ L+ F M +KPN +T V +L ACSH G V +GW HF SM
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 399 KKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDL 458
+ + I P EHY+CM+DLL RAG L +A + I+ MP++ D + WR LGAC+VH NT+L
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 459 AICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNK 518
AA+KIL LDP +P YI LSNIYA + KW+E E+R+ M+ R + KE GCSWIEV
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGD 721
Query: 519 QIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDS----IQY 574
+IH F V D++HP +I L LI ++ GY PDT+ VL LE E E +
Sbjct: 722 KIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQ 781
Query: 575 HSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQD 634
HSEK+A+ FGL+S ++ + +R+ KNLR+CGDCH K + + + IV+RD R+HHF+D
Sbjct: 782 HSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKD 841
Query: 635 GNCSCGDYW 643
G CSC DYW
Sbjct: 842 GKCSCNDYW 850
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 213/414 (51%), Gaps = 19/414 (4%)
Query: 54 DLPRAMKAMHAMQCHGVRA-DSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLV 112
DL A+ A+ M G+R DSVT++ L+K C+ KLVH ++ EP++ L
Sbjct: 41 DLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLY 100
Query: 113 NILLNMHVKFSLLEEAQVLFDQM---PERNVVSWTTMISAYCDAKMNDKALELLIFMLRE 169
N L++++ K +A+ +F+ M +R+VVSW+ M++ Y + A+++ + L
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 170 GVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVG-FESDVFVRSALIDIYAKLGE--L 223
G+ PN + Y+AV+RAC D + + R ++K G FESDV V +LID++ K GE
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSF 219
Query: 224 RNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRAC 283
NA VF++M ++V W +I Q EA+ + M +GF +D+ TL+SV AC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 284 TGLALLELGTQVHVHVLKYDHDLILNNALLDMYCKC---GSLEDAMSVFSRMIQKDVISW 340
L L LG Q+H ++ + +L+DMY KC GS++D VF RM V+SW
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 341 STMISGLAQN-GYSQEALKLFESMKV-SRIKPNYITIVGVLFACSHAGFVEDGWNHFKSM 398
+ +I+G +N + EA+ LF M ++PN+ T AC + G
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 399 KKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALL-GACK 451
K G+ + +I + ++ ++++A + + E + V++ L G C+
Sbjct: 400 FK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 340/576 (59%), Gaps = 2/576 (0%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
R D+ T +++ + +H+ G +++ ++++ K ++
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 130 VLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLI 189
LF + + ++V++ MI Y + +L L ++ G R T +++ L+
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 190 ILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFA 249
++ +H +K F S V +AL +Y+KL E+ +A +F+E P + L WN++I G+
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 250 QNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVH--VHVLKYDHDLI 307
QN ++A++L++ M+++ F+ + T+T +L AC L L LG VH V ++ +
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 308 LNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSR 367
++ AL+ MY KCGS+ +A +F M +K+ ++W+TMISG +G QEAL +F M S
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 368 IKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEA 427
I P +T + VL+ACSHAG V++G F SM YG +P +HY+CM+D+LGRAG LQ A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 428 VKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANS 487
++ I M EP + W LLGAC++H++T+LA ++K+ LDP + G ++LLSNI++
Sbjct: 577 LQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSAD 636
Query: 488 QKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKL 547
+ + + A VR+T + R + K PG + IE+ + H F D SHPQ+ +I + L+ L K+
Sbjct: 637 RNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKM 696
Query: 548 VGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCH 607
GY P+T L D+E E++E ++ HSE+LAI FGL++ G IRI KNLR+C DCH
Sbjct: 697 REAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCH 756
Query: 608 TFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
T KL +K+ + IV+RD R+HHF+DG CSCGDYW
Sbjct: 757 TVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 210/433 (48%), Gaps = 14/433 (3%)
Query: 63 HAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKF 122
H + ++ +S TYA I +++H + G + E L + ++ M+ KF
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 123 SLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG-VRPNMFTYSAV 181
+E+A+ +FD+MPE++ + W TMIS Y +M +++++ ++ E R + T +
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 182 LRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDL 238
L A L LR Q+H K G S +V + I +Y+K G+++ +F E D+
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDI 287
Query: 239 VVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVH 298
V +N++I G+ N + + +L+L+K + +G STL S++ L L+ +H +
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGY 344
Query: 299 VLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEA 356
LK + ++ AL +Y K +E A +F +K + SW+ MISG QNG +++A
Sbjct: 345 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 357 LKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDG-WNHFKSMKKFYGIDPGREHYSCMI 415
+ LF M+ S PN +TI +L AC+ G + G W H + + + + +I
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH--DLVRSTDFESSIYVSTALI 462
Query: 416 DLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPG 475
+ + G + EA +L M + + VTW ++ +H A+ ++LN P
Sbjct: 463 GMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQGQEALNIFYEMLN-SGITPT 520
Query: 476 TYILLSNIYANSQ 488
L +YA S
Sbjct: 521 PVTFLCVLYACSH 533
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 177 TYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTR 236
TY + S+ L Q H II GF +D+ + + L + LG + A +F +
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81
Query: 237 DLVVWNSIIGGFAQNSDVDEALNLYKRMKRA-GFAADQSTLTSVLRACTGLALLELGTQV 295
D+ ++N ++ GF+ N +L+++ ++++ + ST + A +G G +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 296 HVHVL--KYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYS 353
H + D +L+L + ++ MY K +EDA VF RM +KD I W+TMISG +N
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 354 QEALKLFESM-KVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYS 412
E++++F + S + + T++ +L A + + G S+ G +
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM-QIHSLATKTGCYSHDYVLT 260
Query: 413 CMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKIL 467
I L + GK++ L E +PD V + A++ + T+L++ K+++
Sbjct: 261 GFISLYSKCGKIKMGSALFREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A+ MQ + VT ++ C A+ K VH+ V S FE ++ L+
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K + EA+ LFD M ++N V+W TMIS Y +AL + ML G+ P T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 178 YSAVLRACDSLIILRQ----LHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
+ VL AC ++++ + I + GFE V + ++DI + G L+ A M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Query: 234 PTR-DLVVWNSIIGGFAQNSDVDEALNLYKRM 264
VW +++G + D + A + +++
Sbjct: 584 SIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 354/616 (57%), Gaps = 41/616 (6%)
Query: 66 QCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLL 125
QC+ + T+ LIK ++ + +H + + F+ N L++ + L
Sbjct: 126 QCY---PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 126 EEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC 185
+ A +F + E++VVSW +MI+ + DKALEL M E V+ + T VL AC
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 186 DSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVF------------ 230
+ L RQ+ I + ++ + +A++D+Y K G + +A+ +F
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 231 -------------------NEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMK-RAGFA 270
N MP +D+V WN++I + QN +EAL ++ ++ +
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Query: 271 ADQSTLTSVLRACTGLALLELGTQVHVHVLKYD--HDLILNNALLDMYCKCGSLEDAMSV 328
+Q TL S L AC + LELG +H ++ K+ + + +AL+ MY KCG LE + V
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 329 FSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFV 388
F+ + ++DV WS MI GLA +G EA+ +F M+ + +KPN +T V ACSH G V
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 389 EDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLG 448
++ + F M+ YGI P +HY+C++D+LGR+G L++AVK I MP P W ALLG
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 449 ACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKE 508
ACK+H N +LA A ++L L+P++ G ++LLSNIYA KW+ V+E+RK MR G+ KE
Sbjct: 543 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
Query: 509 PGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQ- 567
PGCS IE++ IH F D++HP +K+ L +++KL GY P+ + VLQ +E E+
Sbjct: 603 PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEM 662
Query: 568 KEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPI 627
KE S+ HSEKLAI +GL+S K IR+ KNLR+CGDCH+ AKL +++ ++ I++RD
Sbjct: 663 KEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRY 722
Query: 628 RYHHFQDGNCSCGDYW 643
R+HHF++G CSC D+W
Sbjct: 723 RFHHFRNGQCSCNDFW 738
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 212/417 (50%), Gaps = 51/417 (12%)
Query: 80 LIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHV--KFSLLEEAQVLFDQMPE 137
LI+ C++ + + K H H++ G + + + L M F+ LE A+ +FD++P+
Sbjct: 36 LIERCVS---LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 138 RNVVSWTTMISAYCDAKMNDKALELLIF--MLREG-VRPNMFTYSAVLRAC---DSLIIL 191
N +W T+I AY A D L + F M+ E PN +T+ +++A SL +
Sbjct: 93 PNSFAWNTLIRAY--ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 192 RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQN 251
+ LH +K SDVFV ++LI Y G+L +A VF + +D+V WNS+I GF Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 252 SDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQV--HVHVLKYDHDLILN 309
D+AL L+K+M+ A T+ VL AC + LE G QV ++ + + +L L
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 310 NALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLA--------------------- 348
NA+LDMY KCGS+EDA +F M +KD ++W+TM+ G A
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 349 ----------QNGYSQEALKLFESMKVSR-IKPNYITIVGVLFACSHAGFVEDG-WNHFK 396
QNG EAL +F +++ + +K N IT+V L AC+ G +E G W H
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH-- 388
Query: 397 SMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVH 453
S K +GI S +I + + G L+++ ++ + + + D W A++G +H
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 162/348 (46%), Gaps = 46/348 (13%)
Query: 40 SSLLDDFTRFCYQRDLP-RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHN 98
+S+++ F Q+ P +A++ M+ V+A VT ++ C +E + V +
Sbjct: 201 NSMINGFV----QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 99 HVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDK 158
++ L N +L+M+ K +E+A+ LFD M E++ V+WTTM+ Y ++ +
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 159 ALELLIFM--------------------------------LREGVRPNMFTYSAVLRAC- 185
A E+L M L++ ++ N T + L AC
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 186 --DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNS 243
+L + R +H I K G + V SALI +Y+K G+L + VFN + RD+ VW++
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 244 IIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYD 303
+IGG A + +EA++++ +M+ A + T T+V AC+ L++ + H ++ +
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL-FHQMESN 495
Query: 304 HDLILNN----ALLDMYCKCGSLEDAMSVFSRM-IQKDVISWSTMISG 346
+ ++ ++D+ + G LE A+ M I W ++
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/607 (37%), Positives = 355/607 (58%), Gaps = 40/607 (6%)
Query: 77 YAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMP 136
Y ++ C + AK +H H++ G L N L+N++ K A +FD+MP
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 137 ERNVVSWTTMISAYCDAKMNDKALELLIFMLREG-VRPNMFTYSAVLRACDSLIIL---R 192
R+ ++W ++++A A ++ K L + + +RP+ F +SA+++AC +L + R
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 193 QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNE-------------------- 232
Q+HC I + +D V+S+L+D+YAK G L +A+ VF+
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 233 -----------MPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGF-AADQSTLTSVL 280
+P ++L W ++I GF Q+ EA +++ M+R D L+S++
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 281 RACTGLALLELGTQVH--VHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVI 338
AC LA G QVH V L +D + ++NAL+DMY KC + A +FSRM +DV+
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 339 SWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSM 398
SW+++I G+AQ+G +++AL L++ M +KPN +T VG+++ACSH GFVE G F+SM
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 399 KKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDL 458
K YGI P +HY+C++DLLGR+G L EA LIH MP+ PD TW ALL ACK +
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 459 AICAAKKIL-NLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVN 517
I A ++ + +DP TYILLSNIYA++ W +V+E R+ + + K+PG S +EV
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 518 KQIHAFNVADSSHPQIDKINKHLKHLIQKL-VGVGYAPDTNYVLQDLEGEQKEDSIQYHS 576
K+ F ++SHP + I + LK L +++ + GY PDT+++L D++ ++KE + +HS
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHS 545
Query: 577 EKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGN 636
E+ A+ +GL+ G IRI KNLR+CGDCH K +++ + I++RD RYHHF+ G
Sbjct: 546 ERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGK 605
Query: 637 CSCGDYW 643
CSC D+W
Sbjct: 606 CSCNDFW 612
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 181/381 (47%), Gaps = 46/381 (12%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
+R D ++ L+K C +++ + VH H + + + + + L++M+ K LL A+
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 130 VLFDQMPERNVVSWTTMISAYCDAKMNDKALELL-------------------------- 163
+FD + +N +SWT M+S Y + ++ALEL
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 164 ---IF--MLREGVRP-NMFTYSAVLRACDSL---IILRQLHCGIIKVGFESDVFVRSALI 214
+F M RE V + S+++ AC +L I RQ+H +I +GF+S VF+ +ALI
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 215 DIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQS 274
D+YAK ++ A+ +F+ M RD+V W S+I G AQ+ ++AL LY M G ++
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 275 TLTSVLRACTGLALLELGTQVHVHVLK---YDHDLILNNALLDMYCKCGSLEDAMSVFSR 331
T ++ AC+ + +E G ++ + K L LLD+ + G L++A ++
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 332 M-IQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIK----PNYITIVGVLFACSHAG 386
M D +W+ ++S + G Q +++ + + VS K YI + + + S G
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHL-VSSFKLKDPSTYILLSNIYASASLWG 459
Query: 387 FVEDGWNHFKSMKKFYGIDPG 407
V + M+ DPG
Sbjct: 460 KVSEARRKLGEME--VRKDPG 478
Score = 37.0 bits (84), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAK-LVHNHVLSGGFEPETFLVNIL 115
+A+ M HGV+ + VT+ LI C VE+ + L + G P L
Sbjct: 322 KALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381
Query: 116 LNMHVKFSLLEEAQVLFDQMP-ERNVVSWTTMISA 149
L++ + LL+EA+ L MP + +W ++SA
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 340/557 (61%), Gaps = 38/557 (6%)
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG--VRPNMFTYSAVL 182
L+ A + D+ + + + +MI A+C + + +K+ + +L G ++P+ +T + ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 183 RACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNE------- 232
+AC L + Q+H I+ GF++D V++ LI +YA+LG L + VFN
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 233 ------------------------MPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAG 268
MP RD + WN++I G+AQ + EALN++ M+ G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 269 FAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDLI--LNNALLDMYCKCGSLEDAM 326
+ + SVL ACT L L+ G H ++ + + L L+D+Y KCG +E AM
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 327 SVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAG 386
VF M +K+V +WS+ ++GLA NG+ ++ L+LF MK + PN +T V VL CS G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 387 FVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRAL 446
FV++G HF SM+ +GI+P EHY C++DL RAG+L++AV +I +MP +P A W +L
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 447 LGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGIT 506
L A ++++N +L + A+KK+L L+ + G Y+LLSNIYA+S WD V+ VR++M+++G+
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 507 KEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGE 566
K+PGCS +EVN ++H F V D SHP+ +I+ K + ++L GY DT V+ D++ E
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 535
Query: 567 QKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDP 626
+KED++ HSEK AI FG+MSL + IRI KNLR+CGDCH + + +K+ N+ I++RD
Sbjct: 536 EKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDR 595
Query: 627 IRYHHFQDGNCSCGDYW 643
R+HHF+DG+CSC +W
Sbjct: 596 NRFHHFKDGHCSCNGFW 612
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 42/335 (12%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEE-- 127
++ D+ T L++ C E VH + GF+ + + L++++ + L+
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 128 -----------------------------AQVLFDQMPERNVVSWTTMISAYCDAKMNDK 158
A+ LF+ MPER+ ++W MIS Y + +
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 159 ALELLIFMLREGVRPNMFTYSAVLRACDSLIILRQ---LHCGIIKVGFESDVFVRSALID 215
AL + M EGV+ N +VL AC L L Q H I + + V + + L+D
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 216 IYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQST 275
+YAK G++ A VF M +++ W+S + G A N ++ L L+ MK+ G + T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 276 LTSVLRACTGLALLELGTQVHVHVLKYDH----DLILNNALLDMYCKCGSLEDAMSVFSR 331
SVLR C+ + ++ G Q H ++ + L L+D+Y + G LEDA+S+ +
Sbjct: 344 FVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
Query: 332 MIQKD-VISWSTMISGLAQNGYSQEALKLFESMKV 365
M K WS+++ A Y L + S K+
Sbjct: 403 MPMKPHAAVWSSLLH--ASRMYKNLELGVLASKKM 435
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A+ H MQ GV+ + V ++ C A+++ + H+++ + L L++
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
++ K +E+A +F M E+NV +W++ ++ +K LEL M ++GV PN T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 178 YSAVLRACDSLIIL----RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
+ +VLR C + + R + G E + L+D+YA+ G L +A + +M
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 234 PTRD-LVVWNSII 245
P + VW+S++
Sbjct: 404 PMKPHAAVWSSLL 416
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 356/657 (54%), Gaps = 81/657 (12%)
Query: 65 MQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
M HG+ DS L K C A + K +H G + + F+ + +M+++
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRA 184
+ +A+ +FD+M +++VV+ + ++ AY ++ + +L M G+ N+ +++ +L
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 185 --------------------------------------CDSLIILRQLHCGIIKVGFESD 206
+ L + R +H +IK G D
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKD 286
Query: 207 VFVRSALIDIYAKLGELRNAECVFNEMPTRD----------------------------- 237
V SA+ID+Y K G + +FN+ +
Sbjct: 287 KCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE 346
Query: 238 ------LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLEL 291
+V W SII G AQN EAL L++ M+ AG + T+ S+L AC +A L
Sbjct: 347 QTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGH 406
Query: 292 GTQVH-----VHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISG 346
G H VH+L H + +AL+DMY KCG + + VF+ M K+++ W+++++G
Sbjct: 407 GRSTHGFAVRVHLLDNVH---VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Query: 347 LAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDP 406
+ +G ++E + +FES+ +R+KP++I+ +L AC G ++GW +FK M + YGI P
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Query: 407 GREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKI 466
EHYSCM++LLGRAGKLQEA LI EMP+EPD+ W ALL +C++ N DLA AA+K+
Sbjct: 524 RLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL 583
Query: 467 LNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVA 526
+L+P++PGTY+LLSNIYA W EV +R M + G+ K PGCSWI+V +++
Sbjct: 584 FHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAG 643
Query: 527 DSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLM 586
D SHPQID+I + + + +++ G+ P+ ++ L D+E +++E + HSEKLA+VFGL+
Sbjct: 644 DKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLL 703
Query: 587 SLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ G +++ KNLRICGDCH K + + I IRD R+HHF+DG CSCGD+W
Sbjct: 704 NTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 199/433 (45%), Gaps = 79/433 (18%)
Query: 97 HNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMN 156
H +L G + + ++ L+ + ++ +A ++ +P+ + S++++I A AK+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 157 DKALELLIFMLREGVRPNMFTYSAVLRACDSLI---ILRQLHCGIIKVGFESDVFVRSAL 213
+++ + M G+ P+ + + C L + +Q+HC G + D FV+ ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 214 IDIYAKLGELRNAECVFNEMPTRDLVV--------------------------------- 240
+Y + G + +A VF+ M +D+V
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 241 --WNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVH 298
WN I+ GF ++ EA+ +++++ GF DQ T++SVL + +L +G +H +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 299 VLKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRM------------------------ 332
V+K D + +A++DMY K G + +S+F++
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 333 -----------IQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFA 381
++ +V+SW+++I+G AQNG EAL+LF M+V+ +KPN++TI +L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 382 CSHAGFVEDGWNHFKSMKKFYGIDPGREHY-SCMIDLLGRAGKLQEAVKLIHEMPYEPDA 440
C + + G + + + +D H S +ID+ + G++ + + + MP + +
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLD--NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NL 454
Query: 441 VTWRALLGACKVH 453
V W +L+ +H
Sbjct: 455 VCWNSLMNGFSMH 467
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 164/349 (46%), Gaps = 47/349 (13%)
Query: 40 SSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNH 99
+ +L F R Y ++ + +H + G D VT + ++ + +L+H +
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHL---GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 100 VLSGGFEPETFLVNILLNMHVK-------------FSLLEEA------------------ 128
V+ G + +++ +++M+ K F ++E
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 129 ----QVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRA 184
++ +Q E NVVSWT++I+ + +ALEL M GV+PN T ++L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 185 CDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVW 241
C ++ L R H ++V +V V SALID+YAK G + ++ VFN MPT++LV W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 242 NSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK 301
NS++ GF+ + E +++++ + R D + TS+L AC + L + G + + ++
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-YFKMMS 516
Query: 302 YDHDLILN----NALLDMYCKCGSLEDAMSVFSRM-IQKDVISWSTMIS 345
++ + + ++++ + G L++A + M + D W +++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 193 QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNS 252
Q H I+K G ++D ++ + LI Y+ +A+ V +P + ++S+I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 253 DVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVH--VLKYDHDLILNN 310
+++ ++ RM G D L ++ + C L+ ++G Q+H V D D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 311 ALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKP 370
++ MY +CG + DA VF RM KDV++ S ++ A+ G +E +++ M+ S I+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 371 NYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKL 430
N ++ G+L + +G+ ++ F+ + G P + S ++ +G + L +L
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMG-RL 273
Query: 431 IH 432
IH
Sbjct: 274 IH 275
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 57 RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILL 116
A++ MQ GV+ + VT ++ C A+ + H + + + L+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 117 NMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELL-IF--MLREGVRP 173
+M+ K + +Q++F+ MP +N+V W ++++ + M+ KA E++ IF ++R ++P
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF---SMHGKAKEVMSIFESLMRTRLKP 487
Query: 174 NMFTYSAVLRACDSLIIL----RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECV 229
+ +++++L AC + + + + G + + S ++++ + G+L+ A +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 230 FNEMPTR-DLVVWNSIIGGFAQNSDVDEA 257
EMP D VW +++ ++VD A
Sbjct: 548 IKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/561 (41%), Positives = 332/561 (59%), Gaps = 24/561 (4%)
Query: 106 EPET-FLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYC-DAKMNDKALELL 163
EP T FL +L + FS + A +FD + + W T+I A D ++A L
Sbjct: 79 EPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLY 138
Query: 164 IFMLREG-VRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAK 219
ML G P+ T+ VL+AC + +Q+HC I+K GF DV+V + LI +Y
Sbjct: 139 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 220 LGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSV 279
G L A VF+EMP R LV WNS+I + + D AL L++ M+R+ F D T+ SV
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSV 257
Query: 280 LRACTGLALLELGTQVHVHVLK-----YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQ 334
L AC GL L LGT H +L+ D+++ N+L++MYCKCGSL A VF M +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 335 KDVISWSTMISGLAQNGYSQEALKLFESM--KVSRIKPNYITIVGVLFACSHAGFVEDGW 392
+D+ SW+ MI G A +G ++EA+ F+ M K ++PN +T VG+L AC+H GFV G
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 393 NHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGAC-K 451
+F M + Y I+P EHY C++DL+ RAG + EA+ ++ MP +PDAV WR+LL AC K
Sbjct: 378 QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Query: 452 VHRNTDLAICAAKKILNLDPQD-------PGTYILLSNIYANSQKWDEVAEVRKTMRARG 504
+ +L+ A+ I+ + G Y+LLS +YA++ +W++V VRK M G
Sbjct: 438 KGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHG 497
Query: 505 ITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYV-LQDL 563
I KEPGCS IE+N H F D+SHPQ +I + LK + +L +GY PD + L D
Sbjct: 498 IRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDA 557
Query: 564 EGE-QKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIV 622
+ KE S++ HSE+LAI FGL++L IRI KNLR+C DCH KL +K+ N I+
Sbjct: 558 TNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEII 617
Query: 623 IRDPIRYHHFQDGNCSCGDYW 643
+RD +R+HHF+DG+CSC DYW
Sbjct: 618 VRDRVRFHHFKDGSCSCLDYW 638
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 168/342 (49%), Gaps = 24/342 (7%)
Query: 33 NTITRNSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSV----TYAELIKCCLARH 88
++I +SS + + R C D+ R +A + R +S T+ ++K C
Sbjct: 107 DSIENHSSFMWNTLIRAC-AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 89 AVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMIS 148
E K VH ++ GF + ++ N L++++ L+ A+ +FD+MPER++VSW +MI
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 149 AYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC---DSLIILRQLHCGIIK---VG 202
A D AL+L M R P+ +T +VL AC SL + H +++ V
Sbjct: 226 ALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 203 FESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYK 262
DV V+++LI++Y K G LR AE VF M RDL WN++I GFA + +EA+N +
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 263 RM--KRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDHDLILNNAL------LD 314
RM KR + T +L AC + G Q +++ D + AL +D
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR---DYCIEPALEHYGCIVD 401
Query: 315 MYCKCGSLEDAMS-VFSRMIQKDVISWSTMISGLAQNGYSQE 355
+ + G + +A+ V S ++ D + W +++ + G S E
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/595 (36%), Positives = 346/595 (58%), Gaps = 25/595 (4%)
Query: 64 AMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFS 123
+++ HG+ T+ ++K C + + +H+ V+ GF + + LL+++
Sbjct: 101 SIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSG 160
Query: 124 LLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLR 183
L +A LFD++P+R+VV+WT + S Y + + +A++L M+ GV+P+ + VL
Sbjct: 161 RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLS 220
Query: 184 ACDSLIILRQLHCGIIKVG-----------FESDVFVRSALIDIYAKLGELRNAECVFNE 232
AC +H G + G + + FVR+ L+++YAK G++ A VF+
Sbjct: 221 AC--------VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDS 272
Query: 233 MPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELG 292
M +D+V W+++I G+A NS E + L+ +M + DQ ++ L +C L L+LG
Sbjct: 273 MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 293 ----TQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLA 348
+ + H ++ +L + NAL+DMY KCG++ VF M +KD++ + ISGLA
Sbjct: 333 EWGISLIDRH--EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLA 390
Query: 349 QNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGR 408
+NG+ + + +F + I P+ T +G+L C HAG ++DG F ++ Y +
Sbjct: 391 KNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTV 450
Query: 409 EHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILN 468
EHY CM+DL GRAG L +A +LI +MP P+A+ W ALL C++ ++T LA K+++
Sbjct: 451 EHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA 510
Query: 469 LDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADS 528
L+P + G Y+ LSNIY+ +WDE AEVR M +G+ K PG SWIE+ ++H F D
Sbjct: 511 LEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDK 570
Query: 529 SHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSL 588
SHP DKI L+ L ++ +G+ P T +V D+E E+KE + YHSEKLA+ GL+S
Sbjct: 571 SHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIST 630
Query: 589 TQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
G+ IR+ KNLR+CGDCH KL +K+ + IV+RD R+H F +G+CSC DYW
Sbjct: 631 DHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 203/399 (50%), Gaps = 10/399 (2%)
Query: 89 AVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMIS 148
V K +H +++ +TFLVN+LL + F + + +LF N+ + ++I+
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 149 AYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVGFES 205
+ + + + L+L + + + G+ + FT+ VL+AC S + LH ++K GF
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 206 DVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMK 265
DV ++L+ IY+ G L +A +F+E+P R +V W ++ G+ + EA++L+K+M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 266 RAGFAADQSTLTSVLRACTGLALLELGTQV--HVHVLKYDHDLILNNALLDMYCKCGSLE 323
G D + VL AC + L+ G + ++ ++ + + L+++Y KCG +E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 324 DAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACS 383
A SVF M++KD+++WSTMI G A N + +E ++LF M +KP+ +IVG L +C+
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 384 HAGFVEDG-WNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVT 442
G ++ G W S+ + + +ID+ + G + ++ EM + +
Sbjct: 325 SLGALDLGEWG--ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 443 WRALLGACK-VHRNTDLAICAAKKILNLDPQDPGTYILL 480
A+ G K H A+ + L + P D T++ L
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISP-DGSTFLGL 420
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/604 (36%), Positives = 340/604 (56%), Gaps = 37/604 (6%)
Query: 77 YAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVN----------------------- 113
+ I+ C R ++ K +H ++ GF + F+ N
Sbjct: 47 FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMR 106
Query: 114 --------ILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIF 165
IL+N +V+ L A+ +FD+MP+R + +W MI+ + N++ L L
Sbjct: 107 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 166
Query: 166 MLREGVRPNMFTYSAVLRAC---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGE 222
M G P+ +T +V S+ I +Q+H IK G E D+ V S+L +Y + G+
Sbjct: 167 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 226
Query: 223 LRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRA 282
L++ E V MP R+LV WN++I G AQN + L LYK MK +G ++ T +VL +
Sbjct: 227 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 286
Query: 283 CTGLALLELGTQVHVHVLKYDHDLILNNA--LLDMYCKCGSLEDAMSVFSRMIQKDVISW 340
C+ LA+ G Q+H +K ++ L+ MY KCG L DA FS +D + W
Sbjct: 287 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 346
Query: 341 STMISGLAQNGYSQEALKLFESM-KVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMK 399
S+MIS +G EA++LF +M + + ++ N + + +L+ACSH+G + G F M
Sbjct: 347 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 406
Query: 400 KFYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLA 459
+ YG PG +HY+C++DLLGRAG L +A +I MP + D V W+ LL AC +H+N ++A
Sbjct: 407 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 466
Query: 460 ICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQ 519
K+IL +DP D Y+LL+N++A++++W +V+EVRK+MR + + KE G SW E +
Sbjct: 467 QRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGE 526
Query: 520 IHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKL 579
+H F + D S + +I +LK L ++ GY PDT VL D++ E+KE + HSEKL
Sbjct: 527 VHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKL 586
Query: 580 AIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSC 639
A+ F LM L +G IRI KNLR+C DCH K + ++N+ I +RD R+HHF +G CSC
Sbjct: 587 AVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSC 646
Query: 640 GDYW 643
GDYW
Sbjct: 647 GDYW 650
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 173/354 (48%), Gaps = 14/354 (3%)
Query: 40 SSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNH 99
++++ +F + + + MH + G D T + +V + +H +
Sbjct: 145 NAMIAGLIQFEFNEEGLSLFREMHGL---GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 201
Query: 100 VLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKA 159
+ G E + + + L +M+++ L++ +++ MP RN+V+W T+I +
Sbjct: 202 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 261
Query: 160 LELLIFMLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDI 216
L L M G RPN T+ VL +C L I +Q+H IK+G S V V S+LI +
Sbjct: 262 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 321
Query: 217 YAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRM-KRAGFAADQST 275
Y+K G L +A F+E D V+W+S+I + + DEA+ L+ M ++ ++
Sbjct: 322 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 381
Query: 276 LTSVLRACTGLALLELGTQVH-VHVLKYDHDLILNN--ALLDMYCKCGSLEDAMSVFSRM 332
++L AC+ L + G ++ + V KY L + ++D+ + G L+ A ++ M
Sbjct: 382 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 441
Query: 333 -IQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHA 385
I+ D++ W T++S + ++ A ++F+ ++ +I PN + VL A HA
Sbjct: 442 PIKTDIVIWKTLLSACNIHKNAEMAQRVFK--EILQIDPN-DSACYVLLANVHA 492
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/583 (37%), Positives = 350/583 (60%), Gaps = 13/583 (2%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
V A+S Y +++ A V++ + VH H++ G+ L+ L+ + +
Sbjct: 5 VAANSAAYEAIVR---AGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 130 VLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLI 189
+LF +P + + ++I + ++ + ML V P+ +T+++V+++C L
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 190 ILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIG 246
LR +HC + GF D +V++AL+ Y+K G++ A VF+ MP + +V WNS++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 247 GFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDH 304
GF QN DEA+ ++ +M+ +GF D +T S+L AC + LG+ VH +++ D
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 305 DLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMK 364
++ L AL+++Y +CG + A VF +M + +V +W+ MIS +GY Q+A++LF M+
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 365 VS-RIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGK 423
PN +T V VL AC+HAG VE+G + +K M K Y + PG EH+ CM+D+LGRAG
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 424 LQEAVKLIHEMPYEPDAVT---WRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILL 480
L EA K IH++ A W A+LGACK+HRN DL + AK+++ L+P +PG +++L
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVML 421
Query: 481 SNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHL 540
SNIYA S K DEV+ +R M + K+ G S IEV + + F++ D SH + +I ++L
Sbjct: 422 SNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYL 481
Query: 541 KHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNL 600
+ LI + +GYAP + V+ +E E+KE +++YHSEKLA+ FGL+ T I I KNL
Sbjct: 482 ETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNL 540
Query: 601 RICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
RIC DCH+ K + + N+ I +RD +R+HHFQ+G+CSC DYW
Sbjct: 541 RICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 142/269 (52%), Gaps = 9/269 (3%)
Query: 65 MQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSL 124
M V + T+ +IK C A+ K VH H + GF +T++ L+ + K
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRA 184
+E A+ +FD+MPE+++V+W +++S + + D+A+++ M G P+ T+ ++L A
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 185 C---DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVW 241
C ++ + +H II G + +V + +ALI++Y++ G++ A VF++M ++ W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 242 NSIIGGFAQNSDVDEALNLYKRMK-RAGFAADQSTLTSVLRACTGLALLELGTQVHVHVL 300
++I + + +A+ L+ +M+ G + T +VL AC L+E G V+ +
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
Query: 301 KYDHDLIL----NNALLDMYCKCGSLEDA 325
K + LI + ++DM + G L++A
Sbjct: 338 K-SYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ + M+ G DS T+ L+ C AV VH +++S G + L L+N
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLRE-GVRPNMF 176
++ + + +A+ +FD+M E NV +WT MISAY +A+EL M + G PN
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 177 TYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTR 236
T+ AVL AC H G+++ G V+ R + Y + + + C+ + +
Sbjct: 312 TFVAVLSAC--------AHAGLVEEG--RSVYKR--MTKSYRLIPGVEHHVCMVDMLGR- 358
Query: 237 DLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVH 296
GF +DEA ++ G A + T++L AC +LG ++
Sbjct: 359 ---------AGF-----LDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIA 404
Query: 297 VHVLKYDHDLILNNALL-DMYCKCGSLEDAMSVFSRMIQKDV 337
++ + D ++ +L ++Y G ++ + M++ ++
Sbjct: 405 KRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/574 (38%), Positives = 333/574 (58%), Gaps = 57/574 (9%)
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIF---MLREGVRPNMFTYSAV 181
L+ A +F+QMP+RN SW T+I + ++ + + + +F M E V PN FT+ +V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 182 LRACDSLIIL---RQLHCGIIKVGFESDVFVRSAL------------------------- 213
L+AC + +Q+H +K GF D FV S L
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 214 --------------------IDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSD 253
ID Y +LG+ + A +F++M R +V WN++I G++ N
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 254 VDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHV----LKYDHDLILN 309
+A+ +++ MK+ + TL SVL A + L LELG +H++ ++ D +L
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD--VLG 312
Query: 310 NALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIK 369
+AL+DMY KCG +E A+ VF R+ +++VI+WS MI+G A +G + +A+ F M+ + ++
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 370 PNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVK 429
P+ + + +L ACSH G VE+G +F M G++P EHY CM+DLLGR+G L EA +
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 430 LIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQK 489
I MP +PD V W+ALLGAC++ N ++ A ++++ P D G Y+ LSN+YA+
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 490 WDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVG 549
W EV+E+R M+ + I K+PGCS I+++ +H F V D SHP+ +IN L + KL
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
Query: 550 VGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTF 609
GY P T VL +LE E KE+ + YHSEK+A FGL+S + GK IRI KNLRIC DCH+
Sbjct: 553 AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSS 612
Query: 610 AKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
KL +K+ + I +RD R+HHFQDG+CSC DYW
Sbjct: 613 IKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 154/332 (46%), Gaps = 60/332 (18%)
Query: 185 CDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLG----ELRNAECVFNEMPTRDLVV 240
C ++ L Q+H IK G D + ++ A +L A +FN+MP R+
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 241 WNSIIGGFAQNSDVDEALN----LYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVH 296
WN+II GF++ SD D+AL Y+ M ++ T SVL+AC ++ G Q+H
Sbjct: 93 WNTIIRGFSE-SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 297 VHVLKY-----------------------------------------------DHDLILN 309
LKY D +++L
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 310 NALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIK 369
N ++D Y + G + A +F +M Q+ V+SW+TMISG + NG+ ++A+++F MK I+
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 370 PNYITIVGVLFACSHAGFVEDG-WNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAV 428
PNY+T+V VL A S G +E G W H + ID S +ID+ + G +++A+
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCGIIEKAI 329
Query: 429 KLIHEMPYEPDAVTWRALLGACKVHRNTDLAI 460
+ +P E + +TW A++ +H AI
Sbjct: 330 HVFERLPRE-NVITWSAMINGFAIHGQAGDAI 360
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 52/334 (15%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
V + T+ ++K C ++E K +H L GF + F+++ L+ M+V +++A+
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDAR 183
Query: 130 VLF---------------------------------------------DQMPERNVVSWT 144
VLF D+M +R+VVSW
Sbjct: 184 VLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWN 243
Query: 145 TMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACD---SLIILRQLHCGIIKV 201
TMIS Y A+E+ M + +RPN T +VL A SL + LH
Sbjct: 244 TMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 202 GFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLY 261
G D + SALID+Y+K G + A VF +P +++ W+++I GFA + +A++ +
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 262 KRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLKYDH---DLILNNALLDMYCK 318
+M++AG ++L AC+ L+E G + ++ D + ++D+ +
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Query: 319 CGSLEDAMSVFSRM-IQKDVISWSTMISGLAQNG 351
G L++A M I+ D + W ++ G
Sbjct: 424 SGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ M+ +R + VT ++ ++E + +H + G + L + L++
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+ K ++E+A +F+++P NV++W+ MI+ + A++ M + GVRP+
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 178 YSAVLRACDSLIIL---RQLHCGIIKV-GFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
Y +L AC ++ R+ ++ V G E + ++D+ + G L AE M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 234 PTR-DLVVWNSIIGGFAQNSDVD 255
P + D V+W +++G +V+
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVE 460
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/560 (40%), Positives = 326/560 (58%), Gaps = 7/560 (1%)
Query: 91 EEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAY 150
++ K +H VL GF + L+ LL V + A+ +FD+M + + W T+ Y
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 151 CDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDV 207
++ ++L L M GVRP+ FTY V++A L LH ++K GF
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 208 FVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRA 267
V + L+ +Y K GEL +AE +F M +DLV WN+ + Q + AL + +M
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 268 GFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDA 325
D T+ S+L AC L LE+G +++ K D ++I+ NA LDM+ KCG+ E A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 326 MSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHA 385
+F M Q++V+SWSTMI G A NG S+EAL LF +M+ ++PNY+T +GVL ACSHA
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 386 GFVEDGWNHFKSMKKF--YGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTW 443
G V +G +F M + ++P +EHY+CM+DLLGR+G L+EA + I +MP EPD W
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIW 384
Query: 444 RALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRAR 503
ALLGAC VHR+ L A ++ P ++LLSNIYA + KWD V +VR MR
Sbjct: 385 GALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 504 GITKEPGCSWIEVNKQIHAFNVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDL 563
G K S +E +IH FN D SHPQ I + L +++K+ +GY PDT V D+
Sbjct: 445 GTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDV 504
Query: 564 EGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVI 623
E E+KE S+ +HSEKLAI FGL+ G IR+ KNLR C DCH F+K + + + I++
Sbjct: 505 EMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIM 564
Query: 624 RDPIRYHHFQDGNCSCGDYW 643
RD R+HHF++G CSC ++W
Sbjct: 565 RDKNRFHHFRNGVCSCKEFW 584
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ + M V+ DS T ++ C ++E + +++ + + N L+
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
MH+K E A+VLF++M +RNVVSW+TMI Y + +AL L M EG+RPN T
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 178 YSAVLRACDSLIILRQLHCGIIKVG--------------FESDVFVRSALIDIYAKLGEL 223
+ VL AC H G++ G E + ++D+ + G L
Sbjct: 314 FLGVLSACS--------HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLL 365
Query: 224 RNAECVFNEMPTR-DLVVWNSIIGGFAQNSDV 254
A +MP D +W +++G A + D+
Sbjct: 366 EEAYEFIKKMPVEPDTGIWGALLGACAVHRDM 397
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 347/598 (58%), Gaps = 46/598 (7%)
Query: 90 VEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEE--AQVLFDQMPERNVVSWTTMI 147
+ + K +H HVL G + +++ L+ K + + A+ + + + RN WT +I
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVI 121
Query: 148 SAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIIL---RQLHCGIIKV-GF 203
Y D+A+ + M +E + P FT+SA+L+AC ++ L RQ H ++ GF
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF 181
Query: 204 ------------------------------ESDVFVRSALIDIYAKLGELRNAECVFNEM 233
E DV + LI YA++G + A +F +
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 234 PTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGT 293
PT+D+V W +++ GFAQN+ EAL + RM+++G AD+ T+ + AC L +
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 294 QVHVHVLK------YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGL 347
+ V + + DH +++ +AL+DMY KCG++E+A++VF M K+V ++S+MI GL
Sbjct: 302 RA-VQIAQKSGYSPSDH-VVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 348 AQNGYSQEALKLFESMKV-SRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDP 406
A +G +QEAL LF M + IKPN +T VG L ACSH+G V+ G F SM + +G+ P
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 407 GREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKI 466
R+HY+CM+DLLGR G+LQEA++LI M EP W ALLGAC++H N ++A AA+ +
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHL 479
Query: 467 LNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSW-IEVNKQIHAFNV 525
L+P G YILLSN+YA++ W V VRK ++ +G+ K P SW ++ N Q+H F
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFP 539
Query: 526 ADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGL 585
+ +HP +KI L+ L+++L +GY PD + V D+ K + H+EKLA+ F L
Sbjct: 540 GNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSL 599
Query: 586 MSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
++ + TI I KNLR+C DCH F +L +++ + I++RD +R+HHF+ G+CSCGD+W
Sbjct: 600 LTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 145/345 (42%), Gaps = 81/345 (23%)
Query: 182 LRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRN--AECVFNEMPTRDLV 239
L C +L ++Q+H +++ G + ++ + LI KLG + A V + R+
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 240 VWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHV 299
+W ++I G+A DEA+ +Y M++ T +++L+AC + L LG Q H
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 300 LKYDHD--LILNNALLDMYCKCGSLEDAMSVFSRMIQKDVIS------------------ 339
+ + + N ++DMY KC S++ A VF M ++DVIS
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 340 -------------WSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFAC---- 382
W+ M++G AQN QEAL+ F+ M+ S I+ + +T+ G + AC
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 383 ---------------------------------SHAGFVEDGWNHFKSMKKFYGIDPGRE 409
S G VE+ N F SM +
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-----NKNVF 350
Query: 410 HYSCMIDLLGRAGKLQEAVKLIHEM----PYEPDAVTWRALLGAC 450
YS MI L G+ QEA+ L H M +P+ VT+ L AC
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 351/577 (60%), Gaps = 9/577 (1%)
Query: 76 TYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQM 135
TY L++ C+ ++ K V+ ++S GFEPE +++N +L MHVK ++ +A+ LFD++
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 136 PERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC---DSLIILR 192
PERN+ S+ ++IS + + +A EL M E T++ +LRA S+ + +
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 193 QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNS 252
QLH +K+G + FV LID+Y+K G++ +A C F MP + V WN++I G+A +
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 253 DVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNN 310
+EAL L M+ +G + DQ TL+ ++R T LA LEL Q H +++ ++ +++ N
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 311 ALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKP 370
AL+D Y K G ++ A VF ++ +K++ISW+ ++ G A +G +A+KLFE M + + P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 371 NYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKL 430
N++T + VL AC+++G E GW F SM + +GI P HY+CMI+LLGR G L EA+
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 431 IHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYANSQKW 490
I P + W ALL AC++ N +L A+K+ + P+ G Y+++ N+Y + K
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKT 544
Query: 491 DEVAEVRKTMRARGITKEPGCSWIEVNKQIHAF---NVADSSHPQIDK-INKHLKHLIQK 546
E A V +T+ ++G++ P C+W+EV Q H+F + DS + + + I + + L+++
Sbjct: 545 AEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEE 604
Query: 547 LVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRKNLRICGDC 606
+ GY+ + ++L D++ +++E +YHSEKLAI +GL++ + ++I +N RIC +C
Sbjct: 605 ISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNC 664
Query: 607 HTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
H + + + + +V+RD R+HHF++G CSCG YW
Sbjct: 665 HKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 31/281 (11%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A+ ++ M+ GV D T + +I+ +E K H ++ GFE E L++
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
+ K+ ++ A+ +FD++P +N++SW ++ Y + A++L M+ V PN T
Sbjct: 369 FYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 178 YSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRD 237
+ AVL AC + G+ + G+E +F+ ++ +++ + C+ E+ RD
Sbjct: 429 FLAVLSAC--------AYSGLSEQGWE--IFL--SMSEVHGIKPRAMHYACMI-ELLGRD 475
Query: 238 LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHV 297
+ +DEA+ ++RA + ++L AC LELG V
Sbjct: 476 GL--------------LDEAIAF---IRRAPLKTTVNMWAALLNACRMQENLELGRVVAE 518
Query: 298 HVLKYDHDLILNNALL-DMYCKCGSLEDAMSVFSRMIQKDV 337
+ + + N ++ +MY G +A V + K +
Sbjct: 519 KLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/527 (39%), Positives = 329/527 (62%), Gaps = 6/527 (1%)
Query: 123 SLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVL 182
S + A+ LF+ M E ++V + +M Y + L + +L +G+ P+ +T+ ++L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 183 RACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLV 239
+AC L RQLHC +K+G + +V+V LI++Y + ++ +A CVF+ + +V
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 240 VWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHV 299
+N++I G+A+ + +EAL+L++ M+ ++ TL SVL +C L L+LG +H +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 300 LKYD--HDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEAL 357
K+ + +N AL+DM+ KCGSL+DA+S+F +M KD +WS MI A +G +++++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 358 KLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDL 417
+FE M+ ++P+ IT +G+L ACSH G VE+G +F M +GI P +HY M+DL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 418 LGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTY 477
L RAG L++A + I ++P P + WR LL AC H N DLA +++I LD G Y
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 478 ILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQIDKIN 537
++LSN+YA ++KW+ V +RK M+ R K PGCS IEVN +H F D K++
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLH 496
Query: 538 KHLKHLIQKLVGVGYAPDTNYVLQ-DLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRI 596
+ L ++++L GY PDT+ V+ ++ ++KE +++YHSEKLAI FGL++ G TIR+
Sbjct: 497 RALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRV 556
Query: 597 RKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
KNLR+C DCH AKL + + + +V+RD R+HHF+DG CSCGD+W
Sbjct: 557 VKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 69 GVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEA 128
G+ D+ T+ L+K C A+EE + +H + G + ++ L+NM+ + ++ A
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 129 QVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRAC--- 185
+ +FD++ E VV + MI+ Y ++AL L M + ++PN T +VL +C
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 186 DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSII 245
SL + + +H K F V V +ALID++AK G L +A +F +M +D W+++I
Sbjct: 244 GSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMI 303
Query: 246 GGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVH-VLKYD- 303
+A + ++++ +++RM+ D+ T +L AC+ +E G + V K+
Sbjct: 304 VAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI 363
Query: 304 -HDLILNNALLDMYCKCGSLEDAMSVFSRM-IQKDVISWSTMISGLAQNGYSQEALKLFE 361
+ +++D+ + G+LEDA ++ I + W +++ + + A K+ E
Sbjct: 364 VPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSE 423
Query: 362 SM 363
+
Sbjct: 424 RI 425
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 103/219 (47%), Gaps = 6/219 (2%)
Query: 52 QRDLP-RAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETF 110
+R+ P A+ MQ ++ + +T ++ C +++ K +H + F
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 111 LVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG 170
+ L++M K L++A +F++M ++ +W+ MI AY + +K++ + M E
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 171 VRPNMFTYSAVLRACDSLIILRQ----LHCGIIKVGFESDVFVRSALIDIYAKLGELRNA 226
V+P+ T+ +L AC + + + K G + +++D+ ++ G L +A
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 227 ECVFNEMPTRDL-VVWNSIIGGFAQNSDVDEALNLYKRM 264
+++P ++W ++ + ++++D A + +R+
Sbjct: 387 YEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/525 (40%), Positives = 316/525 (60%), Gaps = 14/525 (2%)
Query: 125 LEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLRE---GVRPNMFTYSAV 181
++EA+++FD+M ERNVV+WTTMI+ Y D A +L M + + Y+
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 182 LRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVW 241
R D+ + V +A+I + ++GE+ A VF+ M RD W
Sbjct: 248 GRIEDAEEFFEVMPM--------KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 242 NSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK 301
+I + + EAL+L+ +M++ G +L S+L C LA L+ G QVH H+++
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 302 --YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKL 359
+D D+ + + L+ MY KCG L A VF R KD+I W+++ISG A +G +EALK+
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 360 FESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLG 419
F M S PN +T++ +L ACS+AG +E+G F+SM+ + + P EHYSC +D+LG
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLG 479
Query: 420 RAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYIL 479
RAG++ +A++LI M +PDA W ALLGACK H DLA AAKK+ +P + GTY+L
Sbjct: 480 RAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVL 539
Query: 480 LSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVAD-SSHPQIDKINK 538
LS+I A+ KW +VA VRK MR ++K PGCSWIEV K++H F +HP+ I
Sbjct: 540 LSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILM 599
Query: 539 HLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKTIRIRK 598
L+ L GY+PD ++VL D++ E+K DS+ HSE+LA+ +GL+ L +G IR+ K
Sbjct: 600 MLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMK 659
Query: 599 NLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
NLR+CGDCH KL +K+ + I++RD R+HHF +G CSC DYW
Sbjct: 660 NLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 169/374 (45%), Gaps = 50/374 (13%)
Query: 113 NILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVR 172
N L++ ++K ++ EA+ +F+ MPERNVVSWT M+ Y M +A E L + + E
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEA-ESLFWRMPE--- 138
Query: 173 PNMFTYSAVLRAC--DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVF 230
N +++ + D I + ++ V DV + +I + G + A +F
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPV---KDVVASTNMIGGLCREGRVDEARLIF 195
Query: 231 NEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLE 290
+EM R++V W ++I G+ QN+ VD A L++ M + + TS+L T +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTLSGRIE 251
Query: 291 LGTQ-VHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQ 349
+ V +K +I NA++ + + G + A VF M +D +W MI +
Sbjct: 252 DAEEFFEVMPMK---PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYER 308
Query: 350 NGYSQEALKLFESMKVSRIKPNYITIVGVLFACS-----------HAGFVE---DGWNHF 395
G+ EAL LF M+ ++P++ +++ +L C+ HA V D +
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 396 KSMKKFYGIDPGRE----------------HYSCMIDLLGRAGKLQEAVKLIHEMPYE-- 437
S+ + G ++ +I G +EA+K+ HEMP
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 438 -PDAVTWRALLGAC 450
P+ VT A+L AC
Sbjct: 429 MPNKVTLIAILTAC 442
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 150/349 (42%), Gaps = 62/349 (17%)
Query: 109 TFLVNILLNMHVKFSLLE------EAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALEL 162
T+L + +N + S L EA+ FD + + + SW +++S Y + +A +L
Sbjct: 11 TYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQL 70
Query: 163 LIFMLREGVRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGE 222
M V S ++ + +I+ + + ++ E +V +A++ Y + G
Sbjct: 71 FDEMSERNVVSWNGLVSGYIK--NRMIVEAR---NVFELMPERNVVSWTAMVKGYMQEGM 125
Query: 223 LRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRA 282
+ AE +F MP R+ V W + GG + +D+A LY M
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV---------------- 169
Query: 283 CTGLALLELGTQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWST 342
D++ + ++ C+ G +++A +F M +++V++W+T
Sbjct: 170 ---------------------KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTT 208
Query: 343 MISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFY 402
MI+G QN A KLFE M + ++ +L + +G +ED ++F+
Sbjct: 209 MITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDA-------EEFF 257
Query: 403 GIDPGREHYSC--MIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
+ P + +C MI G G++ +A ++ M + D TWR ++ A
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKA 305
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A+ MQ GVR + ++ C +++ + VH H++ F+ + ++ ++L+
Sbjct: 315 ALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMT 374
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFT 177
M+VK L +A+++FD+ ++++ W ++IS Y + ++AL++ M G PN T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 178 YSAVLRAC-------DSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVF 230
A+L AC + L I + K V S +D+ + G++ A +
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMES---KFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491
Query: 231 NEMPTR-DLVVWNSIIGGFAQNSDVDEA 257
M + D VW +++G +S +D A
Sbjct: 492 ESMTIKPDATVWGALLGACKTHSRLDLA 519
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 55/261 (21%)
Query: 214 IDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQ 273
I +++G++ A F+ + + + WNSI+ G+ N EA L+ M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-------- 75
Query: 274 STLTSVLRACTGLALLELGTQVHVHVLKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMI 333
+ +++ N L+ Y K + +A +VF M
Sbjct: 76 -----------------------------ERNVVSWNGLVSGYIKNRMIVEARNVFELMP 106
Query: 334 QKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN 393
+++V+SW+ M+ G Q G EA LF M R + ++ + G G ++DG
Sbjct: 107 ERNVVSWTAMVKGYMQEGMVGEAESLFWRMP-ERNEVSWTVMFG--------GLIDDG-- 155
Query: 394 HFKSMKKFYGIDPGREHYSC--MIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACK 451
+K Y + P ++ + MI L R G++ EA +LI + E + VTW ++ +
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA-RLIFDEMRERNVVTWTTMITGYR 214
Query: 452 VHRNTDLAICAAKKILNLDPQ 472
+ D+ A+K+ + P+
Sbjct: 215 QNNRVDV----ARKLFEVMPE 231
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 352/590 (59%), Gaps = 41/590 (6%)
Query: 90 VEEAKLVHNHVLSGGFEPETFLVNILLN-MHVKFSLLEEAQVLFDQMPERNVVSWTTMIS 148
+ A L HN +L P ++N+ L+ + + + LF Q + ++ +T I+
Sbjct: 48 IHAAILRHNLLL----HPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAIN 103
Query: 149 AYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVF 208
+ D+A L + +L + PN FT+S++L++C S + +H ++K G D +
Sbjct: 104 TASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC-STKSGKLIHTHVLKFGLGIDPY 162
Query: 209 VRSALIDIYAKLGELRNAECVFNEMP-------------------------------TRD 237
V + L+D+YAK G++ +A+ VF+ MP RD
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 238 LVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFA-ADQSTLTSVLRACTGLALLELGTQVH 296
+V WN +I G+AQ+ ++AL L++++ G D+ T+ + L AC+ + LE G +H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 297 VHV--LKYDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQ 354
V V + ++ + L+DMY KCGSLE+A+ VF+ +KD+++W+ MI+G A +GYSQ
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 355 EALKLFESMK-VSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSC 413
+AL+LF M+ ++ ++P IT +G L AC+HAG V +G F+SM + YGI P EHY C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 414 MIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQD 473
++ LLGRAG+L+ A + I M + D+V W ++LG+CK+H + L A+ ++ L+ ++
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 474 PGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVADSSHPQI 533
G Y+LLSNIYA+ ++ VA+VR M+ +GI KEPG S IE+ ++H F D H +
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 534 DKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMSLTQGKT 593
+I L+ + +++ GY P+TN VLQDLE +KE S+Q HSE+LAI +GL+S G
Sbjct: 523 KEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSP 582
Query: 594 IRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
++I KNLR+C DCHT KL +K+ + IV+RD R+HHF DG+CSCGD+W
Sbjct: 583 LKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 142/326 (43%), Gaps = 52/326 (15%)
Query: 70 VRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQ 129
+ + T++ L+K C + + KL+H HVL G + ++ L++++ K + AQ
Sbjct: 126 INPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 130 VLFDQMPE-------------------------------RNVVSWTTMISAYCDAKMNDK 158
+FD+MPE R++VSW MI Y +
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 159 ALELLIFMLREG-VRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALI 214
AL L +L EG +P+ T A L AC + L R +H + +V V + LI
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 215 DIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKR-AGFAADQ 273
D+Y+K G L A VFN+ P +D+V WN++I G+A + +AL L+ M+ G
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
Query: 274 STLTSVLRACTGLALLELGTQVHVHV-------LKYDHDLILNNALLDMYCKCGSLEDAM 326
T L+AC L+ G ++ + K +H L+ + + G L+ A
Sbjct: 362 ITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH----YGCLVSLLGRAGQLKRAY 417
Query: 327 SVFSRM-IQKDVISWSTMISGLAQNG 351
M + D + WS+++ +G
Sbjct: 418 ETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 294 QVHVHVLKYDHDL-----ILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLA 348
Q+H +L+++ L +LN L Y G + ++++F + I D+ ++ I+ +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 349 QNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGR 408
NG +A L+ + S I PN T +L +CS H +K GIDP
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTK---SGKLIHTHVLKFGLGIDPYV 163
Query: 409 EHYSCMIDLLGRAGKLQEAVKLIHEMP 435
+ ++D+ + G + A K+ MP
Sbjct: 164 A--TGLVDVYAKGGDVVSAQKVFDRMP 188
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/599 (38%), Positives = 356/599 (59%), Gaps = 10/599 (1%)
Query: 52 QRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFE-PETF 110
R A++ M + V D T + + K +EA+ H + G E F
Sbjct: 143 HRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVF 202
Query: 111 LVNILLNMHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREG 170
+ + L++M+VKF EA+++ D++ E++VV T +I Y + +A++ ML E
Sbjct: 203 VGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK 262
Query: 171 VRPNMFTYSAVLRACDSLIIL---RQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAE 227
V+PN +TY++VL +C +L + + +H ++K GFES + +++L+ +Y + + ++
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 228 CVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLA 287
VF + + V W S+I G QN + AL +++M R + TL+S LR C+ LA
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLA 382
Query: 288 LLELGTQVHVHVLKY--DHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMIS 345
+ E G Q+H V KY D D + L+D+Y KCG + A VF + + DVIS +TMI
Sbjct: 383 MFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 346 GLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGID 405
AQNG+ +EAL LFE M ++PN +T++ VL AC+++ VE+G F S +K I
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIM 501
Query: 406 PGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKK 465
+HY+CM+DLLGRAG+L+EA L E+ PD V WR LL ACKVHR ++A +K
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRK 560
Query: 466 ILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNV 525
IL ++P D GT IL+SN+YA++ KW+ V E++ M+ + K P SW+E+NK+ H F
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMA 620
Query: 526 AD-SSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFG 584
D SHP ++I ++L+ LI+K +GY D + V QD+E KE S+ HSEKLAI F
Sbjct: 621 GDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA 680
Query: 585 LMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
+ G +IRI KNLR+C DCH++ K+ +++ + I+ RD R+HHF+DG+CSCGDYW
Sbjct: 681 VWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 228/437 (52%), Gaps = 12/437 (2%)
Query: 77 YAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMP 136
+++L++ C+ ++ K + H+L GF P + L++ +K ++ A+ +FD M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 137 ERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILRQL-- 194
ER++V+W ++I+ + + +A+E+ M+ V P+ +T S+V +A L + ++
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 195 -HCGIIKVGFE-SDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNS 252
H + +G E S+VFV SAL+D+Y K G+ R A+ V + + +D+V+ ++I G++Q
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 253 DVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELGTQVHVHVLK--YDHDLILNN 310
+ EA+ ++ M ++ T SVL +C L + G +H ++K ++ L
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 311 ALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKP 370
+LL MY +C ++D++ VF + + +SW+++ISGL QNG + AL F M IKP
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 371 NYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHYSCMIDLLGRAGKLQEAVKL 430
N T+ L CS+ E+G + YG D + S +IDL G+ G + +L
Sbjct: 367 NSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRDKYAGSGLIDLYGKCG-CSDMARL 424
Query: 431 IHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILNLDPQDPGTYILLSNIYA--NSQ 488
+ + E D ++ ++ + + A+ ++++NL Q P +LS + A NS+
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQ-PNDVTVLSVLLACNNSR 483
Query: 489 KWDEVAEVRKTMRARGI 505
+E E+ + R I
Sbjct: 484 LVEEGCELFDSFRKDKI 500
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/601 (37%), Positives = 334/601 (55%), Gaps = 41/601 (6%)
Query: 84 CLAR-HAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFS---LLEEAQVLFDQMPERN 139
CL R EE K +H +L G +++ + L+ + + L AQ++FD +
Sbjct: 20 CLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPD 79
Query: 140 VVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACDSLIILR---QLHC 196
W MI + + +++L L ML N +T+ ++L+AC +L Q+H
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 197 GIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSDVD- 255
I K+G+E+DV+ ++LI+ YA G + A +F+ +P D V WNS+I G+ + +D
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 256 ------------------------------EALNLYKRMKRAGFAADQSTLTSVLRACTG 285
EAL L+ M+ + D +L + L AC
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 286 LALLELGTQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTM 343
L LE G +H ++ K D +L L+DMY KCG +E+A+ VF + +K V +W+ +
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 344 ISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYG 403
ISG A +G+ +EA+ F M+ IKPN IT VL ACS+ G VE+G F SM++ Y
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 404 IDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAA 463
+ P EHY C++DLLGRAG L EA + I EMP +P+AV W ALL AC++H+N +L
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIG 439
Query: 464 KKILNLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAF 523
+ ++ +DP G Y+ +NI+A +KWD+ AE R+ M+ +G+ K PGCS I + H F
Sbjct: 440 EILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEF 499
Query: 524 NVADSSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDL-EGEQKEDSIQYHSEKLAIV 582
D SHP+I+KI + + +KL GY P+ +L DL + +++E + HSEKLAI
Sbjct: 500 LAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAIT 559
Query: 583 FGLMSLTQGKTIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDY 642
+GL+ G IRI KNLR+C DCH KL +K+ + IV+RD R+HHF+DG CSCGDY
Sbjct: 560 YGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDY 619
Query: 643 W 643
W
Sbjct: 620 W 620
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 155/325 (47%), Gaps = 42/325 (12%)
Query: 174 NMFTYSAVLRACDSLIILRQLHCGIIKVGFESDVFVRSALIDIYAKLGE---LRNAECVF 230
N++ + L+ C L+Q+H ++K G D + + + L A+ VF
Sbjct: 13 NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 231 NEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLE 290
+ D +WN +I GF+ + + + +L LY+RM + + T S+L+AC+ L+ E
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 291 LGTQVHVHVLK--YDHDLILNNALLDMYC------------------------------- 317
TQ+H + K Y++D+ N+L++ Y
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 318 KCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVG 377
K G ++ A+++F +M +K+ ISW+TMISG Q ++EAL+LF M+ S ++P+ +++
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 378 VLFACSHAGFVEDG-WNHFKSMKKFYGIDPGREHYSC-MIDLLGRAGKLQEAVKLIHEMP 435
L AC+ G +E G W H K +D C +ID+ + G+++EA+++ +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSV---LGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 436 YEPDAVTWRALLGACKVHRNTDLAI 460
+ W AL+ H + AI
Sbjct: 310 -KKSVQAWTALISGYAYHGHGREAI 333
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/597 (38%), Positives = 347/597 (58%), Gaps = 11/597 (1%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLN 117
A++ +M+ H + S T + C + + + +H L G + + N L+
Sbjct: 399 AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458
Query: 118 MHVKFSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMN-DKALELLIFMLREGVRPNMF 176
++ + L E + +F MPE + VSW ++I A ++ + +A+ + R G + N
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518
Query: 177 TYSAVLRACDSLI---ILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECVFNEM 233
T+S+VL A SL + +Q+H +K + +ALI Y K GE+ E +F+ M
Sbjct: 519 TFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Query: 234 PTR-DLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLALLELG 292
R D V WNS+I G+ N + +AL+L M + G D +VL A +A LE G
Sbjct: 579 AERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Query: 293 TQVHVHVLK--YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQN 350
+VH ++ + D+++ +AL+DMY KCG L+ A+ F+ M ++ SW++MISG A++
Sbjct: 639 MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARH 698
Query: 351 GYSQEALKLFESMKV-SRIKPNYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGRE 409
G +EALKLFE+MK+ + P+++T VGVL ACSHAG +E+G+ HF+SM YG+ P E
Sbjct: 699 GQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIE 758
Query: 410 HYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGAC--KVHRNTDLAICAAKKIL 467
H+SCM D+LGRAG+L + I +MP +P+ + WR +LGAC R +L AA+ +
Sbjct: 759 HFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF 818
Query: 468 NLDPQDPGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNKQIHAFNVAD 527
L+P++ Y+LL N+YA +W+++ + RK M+ + KE G SW+ + +H F D
Sbjct: 819 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD 878
Query: 528 SSHPQIDKINKHLKHLIQKLVGVGYAPDTNYVLQDLEGEQKEDSIQYHSEKLAIVFGLMS 587
SHP D I K LK L +K+ GY P T + L DLE E KE+ + YHSEKLA+ F L +
Sbjct: 879 KSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAA 938
Query: 588 LTQGK-TIRIRKNLRICGDCHTFAKLTAKMENQTIVIRDPIRYHHFQDGNCSCGDYW 643
IRI KNLR+CGDCH+ K +K+E + I++RD R+HHFQDG CSC D+W
Sbjct: 939 QRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 204/409 (49%), Gaps = 21/409 (5%)
Query: 58 AMKAMHAMQCHGVRADSVTYAELIKCC--LARHAVEEAKLVHNHVLSGGFEPETFLVNIL 115
A+ + M G+ ++ + +++ C + + + +H + + + + N+L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 116 LNMHVK-FSLLEEAQVLFDQMPERNVVSWTTMISAYCDAKMNDKALELLIFMLREGVRPN 174
++M+ K + A F + +N VSW ++IS Y A A + M +G RP
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 175 MFTYSAVLRACDSLI-----ILRQLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAECV 229
+T+ +++ SL +L Q+ C I K G +D+FV S L+ +AK G L A V
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 230 FNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAGFAADQSTLTSVLRACTGLAL- 288
FN+M TR+ V N ++ G + +EA L+ M + +S + +L + +L
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI-LLSSFPEYSLA 324
Query: 289 ----LELGTQVHVHVLK---YDHDLILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWS 341
L+ G +VH HV+ D + + N L++MY KCGS+ DA VF M KD +SW+
Sbjct: 325 EEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWN 384
Query: 342 TMISGLAQNGYSQEALKLFESMKVSRIKPNYITIVGVLFACSHAGFVEDGWN-HFKSMKK 400
+MI+GL QNG EA++ ++SM+ I P T++ L +C+ + + G H +S+K
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK- 443
Query: 401 FYGIDPGREHYSCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGA 449
GID + ++ L G L E K+ MP E D V+W +++GA
Sbjct: 444 -LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 217/450 (48%), Gaps = 57/450 (12%)
Query: 80 LIKCCLARHAVEEAKLVHNHVLSGGFEPETFLVNILLNMHVKFSLLEEAQVLFDQMPERN 139
++ C+ A+ H+ + + + +L N L+N +++ A+ +FD+MP RN
Sbjct: 9 FVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 140 VVSWTTMISAYCDAKMNDKALELLIFMLREGVRPNMFTYSAVLRACD-----SLIILRQL 194
VSW ++S Y + +AL L M++EG+ N + + +VLRAC ++ RQ+
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 195 HCGIIKVGFESDVFVRSALIDIYAK-LGELRNAECVFNEMPTRDLVVWNSIIGGFAQNSD 253
H + K+ + D V + LI +Y K +G + A C F ++ ++ V WNSII ++Q D
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 254 VDEALNLYKRMKRAGFAADQSTLTS-VLRACT----GLALLELGTQVHVHVLKYD--HDL 306
A ++ M+ G + T S V AC+ + LLE Q+ + K DL
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGLLTDL 243
Query: 307 ILNNALLDMYCKCGSLEDAMSVFSRMIQKDVISWSTMISGLAQNGYSQEALKLFESMK-V 365
+ + L+ + K GSL A VF++M ++ ++ + ++ GL + + +EA KLF M +
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 366 SRIKP-NYITIVGVLFACSHAGFVEDGWNHFKSMKKFYGIDPGREHY------------- 411
+ P +Y+ ++ + F E S+ + G+ GRE +
Sbjct: 304 IDVSPESYVILL--------SSFPE------YSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 412 ---SCMIDLLGRAGKLQEAVKLIHEMPYEPDAVTWRALLGACKVHRNTDLAICAAKKILN 468
+ ++++ + G + +A ++ + M + D+V+W +++ I A ++ +
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLD---QNGCFIEAVERYKS 405
Query: 469 LDPQD--PGTYILLSNIYA-NSQKWDEVAE 495
+ D PG++ L+S++ + S KW ++ +
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 20/363 (5%)
Query: 52 QRDLPRAMKAMHAMQCHGVRADSVTYAELIKCCLARHAVEEAKLVHNHVLSGGFEPETFL 111
+R LP A+ Q G + + +T++ ++ + E K +H L E
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 112 VNILLNMHVKFSLLEEAQVLFDQMPE-RNVVSWTTMISAYCDAKMNDKALELLIFMLREG 170
N L+ + K ++ + +F +M E R+ V+W +MIS Y ++ KAL+L+ FML+ G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 171 VRPNMFTYSAVLRACDSLIILR---QLHCGIIKVGFESDVFVRSALIDIYAKLGELRNAE 227
R + F Y+ VL A S+ L ++H ++ ESDV V SAL+D+Y+K G L A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 674
Query: 228 CVFNEMPTRDLVVWNSIIGGFAQNSDVDEALNLYKRMKRAG-FAADQSTLTSVLRACTGL 286
FN MP R+ WNS+I G+A++ +EAL L++ MK G D T VL AC+
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHA 734
Query: 287 ALLELGTQVHVHVLKYDHDLILN----NALLDMYCKCGSLEDAMSVFSRM-IQKDVISWS 341
LLE G + H + + L + + D+ + G L+ +M ++ +V+ W
Sbjct: 735 GLLEEGFK-HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 342 TMISGLAQ-NGYSQEALKLFESMKVSRIKP----NYITIVGVLFACSHAGFVEDGWNHFK 396
T++ + NG E K M + +++P NY+ ++G ++A G ED K
Sbjct: 794 TVLGACCRANGRKAELGKKAAEM-LFQLEPENAVNYV-LLGNMYAA--GGRWEDLVKARK 849
Query: 397 SMK 399
MK
Sbjct: 850 KMK 852
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,775,796
Number of Sequences: 539616
Number of extensions: 9267613
Number of successful extensions: 30342
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 21244
Number of HSP's gapped (non-prelim): 2334
length of query: 643
length of database: 191,569,459
effective HSP length: 124
effective length of query: 519
effective length of database: 124,657,075
effective search space: 64697021925
effective search space used: 64697021925
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)