BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045674
(650 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/656 (68%), Positives = 540/656 (82%), Gaps = 6/656 (0%)
Query: 1 MRRVLRRPFSATLLQSP--PKLKLPPYKPGNNVGSPRNMGPLASFTSNPR---SANSFPP 55
MRR R+PFS LL P YK G+ + PL+S ++ R +++S PP
Sbjct: 1 MRRFYRKPFSVPLLNRPHCSSQSHCLYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSLPP 60
Query: 56 PEWVEPFNDVSDLVSCPQNLNPSPWVRQILNLLDGSSDMEANLDSFCRKFLIKLSPNFVS 115
PEW+EPFNDVSDLV +NL PSPWV QILNLLDGS+ ME+NLD FCRKFLIKLSPNFVS
Sbjct: 61 PEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVS 120
Query: 116 FVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKE 175
FVL++ ++ ++P++ F W+ +QKKY+HNLECY+SL+D LAL DVDR+R V +E+K+
Sbjct: 121 FVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKK 180
Query: 176 KGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIES 235
F MTVSAAN+LIKSFG LGMVEELLWVWR MKENGIEP+LYTYNFLMNGLV++MF++S
Sbjct: 181 FEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 236 SELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
+E VF+VME+G++ PD+VTYNTMIKGYCK G+TQKAMEK R ME R + DKITYMT+IQ
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
ACY + DF SC++LY EMDEKGI++P HA++LVIGGLCK GK EG+ +FE+MIR+G +P
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
NVAIYT LID YAK GS+ +AI + RM EG +PD VTY V+++GLCKN R+EEA+ YF
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
CR +G+A+N+MFYSSLIDGLGKAGRVDEAE LFEEM EKGC RDSYCYN LIDA K
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 476 GKLDEALALFKRM-EDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAAS 534
K+DEA+ALFKRM E+EGCDQTVYTYTIL++GMFKEHRNEEALKLWDMMIDKGITPTAA
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540
Query: 535 FRALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMITCLCKTGRIKEACKLADGIVD 594
FRALS GLCLSGKVARACKILDELAP G+I + A EDMI LCK GRIKEACKLADGI +
Sbjct: 541 FRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITE 600
Query: 595 REREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKRRVKFRSLVES 650
R RE+PG+IRT +INALRK G ADLA+KLMHSKIG+GY+RMGS+KRRVKF +L+E+
Sbjct: 601 RGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLET 656
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 265/537 (49%), Gaps = 38/537 (7%)
Query: 128 NVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANS 187
+ LRLF A+++ +S Y ++ L G D ++ + ++K M S
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 188 LIKSFGGLGMVEELLWVWRSM-KENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENG 246
LI+S+ + +E+L V M E G++P + YN ++N LV+ ++ E+ M
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 247 KVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSC 306
+ PDV T+N +IK C+ + + A+ M + + PD+ T+ T++Q EGD D
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 307 LSLYHEMDEKGIEIPSHAYNLVIGGLCKVGK----------------------------- 337
L + +M E G + + N+++ G CK G+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 338 --CIEGHA-----IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEP 390
C GH I + M++ G P+V Y ++I KLG + EA+ + ++M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 391 DEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELF 450
+ VTY +IS LCK ++EEA + + G+ + ++SLI GL A ELF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 451 EEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKE 510
EEM KGC D + YN+LID+L GKLDEAL + K+ME GC ++V TY LI+G K
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 511 HRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AF 569
++ EA +++D M G++ + ++ L GLC S +V A +++D++ +G P+ +
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 570 EDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHS 626
++T C+ G IK+A + + E LI+ L KAG ++A KL+ S
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 217/429 (50%), Gaps = 4/429 (0%)
Query: 161 GDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK-ENGIEPSLYT 219
GD+D + ++ E G + + N ++ F G VE+ L + M ++G P YT
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 220 YNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAME 279
+N L+NGL + ++ + + VM PDV TYN++I G CK+G+ ++A+E M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 280 ARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCI 339
R+ P+ +TY TLI E + L + KGI +N +I GLC
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 340 EGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVII 399
+FE M +GC+P+ Y LIDS G ++EA+N+ ++M+ G +TY +I
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 400 SGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCP 459
G CK + EA + F+ +GV+ N++ Y++LIDGL K+ RV++A +L ++M+ +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 460 RDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKL 519
D Y YN L+ + G + +A + + M GC+ + TY LI+G+ K R E A KL
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 520 WDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA--FEDMITCLC 577
+ KGI T ++ + GL K A + E+ + P A + + LC
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Query: 578 K-TGRIKEA 585
G I+EA
Sbjct: 658 NGGGPIREA 666
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 204/460 (44%), Gaps = 38/460 (8%)
Query: 175 EKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIE 234
+ GF N+L+ G V+ + + M + G +P +YTYN +++GL ++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 235 SSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLI 294
+ V M P+ VTYNT+I CK + ++A E R + ++ + PD T+ +LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 295 QACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQ 354
Q L + + L+ EM KG E YN++I LC GK E + + M GC
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 355 PNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQY 414
+V Y LID + K EA IF+ M+ GV + VTY +I GLCK+ R+E+A Q
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 415 FE--------------------FCR---------------ANGVAVNAMFYSSLIDGLGK 439
+ FCR +NG + + Y +LI GL K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 440 AGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRM-EDEGCDQTVY 498
AGRV+ A +L + KG + YN +I L + K EA+ LF+ M E
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 499 TYTILINGMFKEHRN-EEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDE 557
+Y I+ G+ EA+ +++KG P +S L+ GL K+++
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNM 707
Query: 558 LAPKGIIPETAFEDMITCLCKTGRIKEACKLADGIVDRER 597
+ K E M+ L K + ++A G++D +
Sbjct: 708 VMQKARFSEEEV-SMVKGLLKIRKFQDALATLGGVLDSRQ 746
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
SLI L L + +F E++ KG N LI S G ++E L + + M+ +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
G S+ TYN L++G + +E +F ME V + VTYNT+I G CK + + A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
+ M +PDK TY +L+ GD + M G E Y +I G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIF-ERMKYEGVEP 390
LCK G+ + S+ +G Y +I + EAIN+F E ++ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 391 DEVTYGVIISGLC 403
D V+Y ++ GLC
Sbjct: 645 DAVSYRIVFRGLC 657
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 23/353 (6%)
Query: 119 RNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGF 178
RNH V + LF R K + Y LID L G +D + +++ G
Sbjct: 414 RNH------RVAMELFE-EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 179 LMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIE-SSE 237
+V N+LI F E ++ M+ +G+ + TYN L++GL S +E +++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 238 LVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQAC 297
L+ +++ G+ PD TYN+++ +C+ G +KA + +AM + +PD +TY TLI
Sbjct: 527 LMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 298 YLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNV 357
G + L + KGI + HAYN VI GL + K E +F M+ + P
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Query: 358 AIYTALIDSYAKL----GSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQ 413
A+ ++ + L G + EA++ + +G P+ + ++ GL L +M+
Sbjct: 646 AVSYRIV--FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL-----LTLSME 698
Query: 414 YFEFCRANGVAVNAMFYS---SLIDGLGKAGRVDEAEELFEEMVEKGCPRDSY 463
N V A F S++ GL K + +A +++ PR +Y
Sbjct: 699 ETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTY 751
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 152/385 (39%), Gaps = 64/385 (16%)
Query: 303 FDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA---------IFESMIRR-- 351
F SCL Y + + + H+++L + H+ + +S+ +
Sbjct: 3 FSSCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPD 62
Query: 352 ---------------GCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYG 396
P A+Y ++ + GS ++ I E MK E T+
Sbjct: 63 DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFL 122
Query: 397 VIISGLCKNERLEE--------------------------------AMQYFEFCRAN--- 421
++I + E +E +++ E A
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 422 -GVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDE 480
G+ + ++ LI L +A ++ A + E+M G D + ++ + G LD
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 481 ALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDK-GITPTAASFRALS 539
AL + ++M + GC + + ++++G KE R E+AL M ++ G P +F L
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 540 IGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRERE 598
GLC +G V A +I+D + +G P+ + +I+ LCK G +KEA ++ D ++ R+
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 599 IPGKIRTALINALRKAGNADLAIKL 623
LI+ L K + A +L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATEL 387
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 243/495 (49%), Gaps = 16/495 (3%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
+ + S N+ Y LI G++D +F++++ KG L V N+LI + L ++
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
+ + RSM G+EP+L +YN ++NGL ++ V M D VTYNT+I
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIE 319
KGYCK G +A+ M + P ITY +LI + G+ + + +M +G+
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 320 IPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
Y ++ G + G E + + M G P+V Y ALI+ + G M +AI +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
E MK +G+ PD V+Y ++SG C++ ++EA++ G+ + + YSSLI G +
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 440 AGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYT 499
R EA +L+EEM+ G P D + Y LI+A G L++AL L M ++G V T
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 500 YTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRAL----------SI-----GLCL 544
Y++LING+ K+ R EA +L + + P+ ++ L S+ G C+
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 545 SGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKI 603
G + A ++ + + K P+ TA+ MI C+ G I++A L +V +
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 604 RTALINALRKAGNAD 618
AL+ AL K G +
Sbjct: 678 VIALVKALHKEGKVN 692
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 254/501 (50%), Gaps = 11/501 (2%)
Query: 155 DCLALCGDVDRVRLVFNELKEKGFL--MTVSAANSLIKSFGGLGMVEELLWVWRSMKENG 212
D A D + LVF L+E L T S + ++KS+ L ++++ L + + +G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 213 IEPSLYTYNFLMNGLVNSMF-IESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
P + +YN +++ + S I +E VFK M +V P+V TYN +I+G+C G A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 272 MEKFRAMEARNVQPDKITYMTLIQA-CYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIG 330
+ F ME + P+ +TY TLI C L D L M KG+E +YN+VI
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLR-KIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 331 GLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEP 390
GLC+ G+ E + M RRG + Y LI Y K G+ ++A+ + M G+ P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 391 DEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELF 450
+TY +I +CK + AM++ + R G+ N Y++L+DG + G ++EA +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 451 EEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKE 510
EM + G YN LI+ GK+++A+A+ + M+++G V +Y+ +++G +
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 511 HRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIP-ETAF 569
+ +EAL++ M++KGI P ++ +L G C + AC + +E+ G+ P E +
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 570 EDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIG 629
+I C G +++A +L + +V++ + LIN L K A +L+ +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL---LK 580
Query: 630 VGYDRMGSIKRRVKFRSLVES 650
+ Y+ S+ V + +L+E+
Sbjct: 581 LFYEE--SVPSDVTYHTLIEN 599
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 225/506 (44%), Gaps = 19/506 (3%)
Query: 79 PWVRQILNLLDGSSDMEANLDSF--CRKFLIK-LSPNFVSFVLRNHDVSKRPNVGLRLFT 135
P V L+DG + D F R +K L PN +S+ + + + + + F
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 136 WAARQKK-YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGG 194
++ YS + Y +LI G+ + ++ E+ G +V SLI S
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 195 LGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVT 254
G + + M+ G+ P+ TY L++G ++ + V + M + P VVT
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 255 YNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMD 314
YN +I G+C GK + A+ M+ + + PD ++Y T++ D D L + EM
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 315 EKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMN 374
EKGI+ + Y+ +I G C+ + E ++E M+R G P+ YTALI++Y G +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 375 EAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQ-----YFEFCRANGVAVNAMF 429
+A+ + M +GV PD VTY V+I+GL K R EA + ++E + V + +
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 430 YS----------SLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLD 479
+ SLI G G + EA+++FE M+ K D YN++I + G +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 480 EALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALS 539
+A L+K M G T L+ + KE + E + ++ A + L
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLV 717
Query: 540 IGLCLSGKVARACKILDELAPKGIIP 565
G + +L E+A G +P
Sbjct: 718 EINHREGNMDVVLDVLAEMAKDGFLP 743
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 251/518 (48%), Gaps = 18/518 (3%)
Query: 132 RLFTWAARQKKY---------------SHNLECYISLIDCLALCGDVDRVRLVFNELKEK 176
RLF+ A+ K+Y +HNL +I+C C + ++ +
Sbjct: 93 RLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL 152
Query: 177 GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL-VNSMFIES 235
G+ ++LI G V E L + M E G +P L T N L+NGL ++ E+
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 236 SELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
L+ K++E G P+ VTY ++ CK G+T AME R ME RN++ D + Y +I
Sbjct: 213 MLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
G D+ +L++EM+ KGI YN++IGG C G+ +G + MI+R P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
NV ++ LIDS+ K G + EA + + M + G+ PD +TY +I G CK L++A Q
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
+ + G N ++ LI+G KA R+D+ ELF +M +G D+ YN LI +
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 476 GKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 535
GKL+ A LF+ M + TY IL++G+ +E+AL++++ + + +
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 536 RALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVD 594
+ G+C + KV A + L KG+ P + MI LCK G + EA L + +
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 595 REREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGY 632
G LI A G+A ++KL+ G+
Sbjct: 572 DGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 207/423 (48%), Gaps = 5/423 (1%)
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYC 263
++R M + P++ ++ L + + + + + K ME + ++ T + MI +C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 264 KVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSH 323
+ K A + +P+ IT+ TLI LEG L L M E G +
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 324 AYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERM 383
N ++ GLC GK E + + M+ GCQPN Y +++ K G A+ + +M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 384 KYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRV 443
+ ++ D V Y +II GLCK+ L+ A F G+ N + Y+ LI G AGR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 444 DEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTIL 503
D+ +L +M+++ + ++VLID+ K GKL EA L K M G TYT L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 504 INGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI 563
I+G KE+ ++A ++ D+M+ KG P +F L G C + ++ ++ +++ +G+
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 564 IPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRT--ALINALRKAGNADLA 620
+ +T + +I C+ G++ A +L +V R++P I T L++ L G ++ A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMV--SRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 621 IKL 623
+++
Sbjct: 493 LEI 495
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 206/434 (47%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
+L++ L L G L+ +++ E G ++ G + + R M+E
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
I+ Y+ +++GL ++++ +F ME + +++TYN +I G+C G+
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
+ R M R + P+ +T+ LI + EG L+ EM +GI + Y +I G
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPD 391
CK + + + + M+ +GC PN+ + LI+ Y K +++ + +F +M GV D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 392 EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE 451
VTY +I G C+ +L A + F+ + V N + Y L+DGL G ++A E+FE
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 452 EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEH 511
++ + D YN++I + K+D+A LF + +G V TY I+I G+ K+
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 512 RNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFED 571
EA L+ M + G P ++ L G ++ K+++EL G + +
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 572 MITCLCKTGRIKEA 585
M+ + GR+K++
Sbjct: 618 MVIDMLSDGRLKKS 631
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 171/358 (47%), Gaps = 1/358 (0%)
Query: 267 KTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYN 326
K A++ FR M P I + L A +D L+L +M+ KGI + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 327 LVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYE 386
++I C+ K + +I+ G +PN ++ LI+ G ++EA+ + +RM
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 387 GVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEA 446
G +PD +T +++GLC + + EAM + G NA+ Y +++ + K+G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
EL +M E+ D+ Y+++ID L K G LD A LF ME +G + TY ILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE 566
R ++ KL MI + I P +F L GK+ A ++ E+ +GI P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 567 T-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKL 623
T + +I CK + +A ++ D +V + + + LIN KA D ++L
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 162/391 (41%), Gaps = 70/391 (17%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +ID L G +D +FNE++ KG + N LI F G ++ + R M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTY-------------- 255
+ I P++ T++ L++ V + +E + K M + + PD +TY
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 256 ---------------------NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLI 294
N +I GYCK + +E FR M R V D +TY TLI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 295 QACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQ 354
Q G C++GK +F+ M+ R
Sbjct: 446 Q-----------------------------------GFCELGKLNVAKELFQEMVSRKVP 470
Query: 355 PNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQY 414
PN+ Y L+D G +A+ IFE+++ +E D Y +II G+C ++++A
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 415 FEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAK 474
F GV Y+ +I GL K G + EAE LF +M E G D + YN+LI A
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 475 CGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
G +++ L + ++ G T ++I+
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVID 621
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 246/500 (49%), Gaps = 37/500 (7%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y ++ CL G VD VF E+K K +S N LI G ++ + SM+
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
+ G+ P++ T N +++ L S ++ + +F+ M+ PD +T+ ++I G KVG+
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM---------------- 313
A + + M + + + I Y +LI+ + G + +Y +M
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 314 --------DEKGIEI-----------PSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQ 354
EKG + + +Y+++I GL K G E + +F SM +GC
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 355 PNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQY 414
+ Y +ID + K G +N+A + E MK +G EP VTYG +I GL K +RL+EA
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 415 FEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAK 474
FE ++ + +N + YSSLIDG GK GR+DEA + EE+++KG + Y +N L+DAL K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 475 CGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAAS 534
+++EAL F+ M++ C TY ILING+ K + +A W M +G+ P+ S
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 535 FRALSIGLCLSGKVARACKILDELAPKGIIPETA-FEDMITCLCKTGRIKEACKLADGIV 593
+ + GL +G +A A + D G +P++A + MI L R +A L +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 594 DREREIPGKIRTALINALRK 613
R I K L++ L K
Sbjct: 825 RRGLPIHNKTCVVLLDTLHK 844
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 248/564 (43%), Gaps = 42/564 (7%)
Query: 107 IKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRV 166
K P FV VLR K N + F W R+ + H E Y SL+ +A C + D +
Sbjct: 61 FKPQPEFVIGVLRR---LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL 117
Query: 167 RLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNG 226
+ E+ GF +V+ ++ + E V + M++ P+ Y L+
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 227 LVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYC----------------------- 263
+ +F+ M+ P V + T+I+G+
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 264 ------------KVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYH 311
KVGK A + F +EA ++PD++TY ++I D + ++
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 312 EMDEKGIEIP-SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKL 370
+ EK +P ++AYN +I G GK E +++ E +G P+V Y ++ K+
Sbjct: 298 HL-EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 371 GSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFY 430
G ++EA+ +FE MK + P+ TY ++I LC+ +L+ A + + + G+ N
Sbjct: 357 GKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 431 SSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMED 490
+ ++D L K+ ++DEA +FEEM K C D + LID L K G++D+A ++++M D
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 491 EGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVAR 550
C YT LI F R E+ K++ MI++ +P + +G+ +
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 551 ACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALIN 609
+ +E+ + +P+ ++ +I L K G E +L + ++ + + +I+
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 610 ALRKAGNADLAIKLMHSKIGVGYD 633
K G + A +L+ G++
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFE 619
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 37/420 (8%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
+ SLID L G VD V+ ++ + SLIK+F G E+ +++ M
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 210 ENGIEPSLY-----------------------------------TYNFLMNGLVNSMFI- 233
P L +Y+ L++GL+ + F
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 234 ESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTL 293
E+ EL + + E G V D YN +I G+CK GK KA + M+ + +P +TY ++
Sbjct: 570 ETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 294 IQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGC 353
I D L+ E K IE+ Y+ +I G KVG+ E + I E ++++G
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 354 QPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQ 413
PN+ + +L+D+ K +NEA+ F+ MK P++VTYG++I+GLCK + +A
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 414 YFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALA 473
+++ + G+ + + Y+++I GL KAG + EA LF+ G DS CYN +I+ L+
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 474 KCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAA 533
+ +A +LF+ G T +L++ + K E+A + ++ + G AA
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA 868
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 1/336 (0%)
Query: 127 PNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAAN 186
P G +F + +++ + Y LI L G + +F +KE+G ++ A N
Sbjct: 533 PEKGRAMFE-EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 187 SLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENG 246
+I F G V + + MK G EP++ TY +++GL ++ + ++F+ ++
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 247 KVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSC 306
++ +VV Y+++I G+ KVG+ +A + + + P+ T+ +L+ A + +
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 307 LSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDS 366
L + M E Y ++I GLCKV K + ++ M ++G +P+ YT +I
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 367 YAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVN 426
AK G++ EA +F+R K G PD Y +I GL R +A FE R G+ ++
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 427 AMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
L+D L K +++A + + E G R +
Sbjct: 832 NKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHA 867
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 235/471 (49%), Gaps = 18/471 (3%)
Query: 132 RLFTWAARQKKY---------------SHNLECYISLIDCLALCGDVDRVRLVFNELKEK 176
RLF+ A+ K+Y +H++ +I+C C + ++ +
Sbjct: 93 RLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL 152
Query: 177 GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL-VNSMFIES 235
G+ N+L+ V E L + M E G +P+L T N L+NGL +N ++
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 236 SELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
L+ +++E G P+ VTY ++ CK G+T AME R ME RN++ D + Y +I
Sbjct: 213 VVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
+G D+ +L++EM+ KG + YN +IGG C G+ +G + MI+R P
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
NV ++ LIDS+ K G + EA + + M G+ P+ +TY +I G CK RLEEA+Q
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
+ + G + M ++ LI+G KA R+D+ ELF EM +G ++ YN L+ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 476 GKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 535
GKL+ A LF+ M + +Y IL++G+ E+AL+++ + + +
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 536 RALSIGLCLSGKVARACKILDELAPKGI-IPETAFEDMITCLCKTGRIKEA 585
+ G+C + KV A + L KG+ + A+ MI+ LC+ + +A
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 191/393 (48%), Gaps = 1/393 (0%)
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYC 263
++R M ++ P++ +N L + + + E + K ME+ + + T + MI +C
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 264 KVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSH 323
+ K A + +PD + + TL+ LE L L M E G +
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 324 AYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERM 383
N ++ GLC GK + + + M+ G QPN Y +++ K G A+ + +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 384 KYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRV 443
+ ++ D V Y +II GLCK+ L+ A F G + + Y++LI G AGR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 444 DEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTIL 503
D+ +L +M+++ + ++VLID+ K GKL EA L K M G TY L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 504 INGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI 563
I+G KE+R EEA+++ D+MI KG P +F L G C + ++ ++ E++ +G+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 564 IPET-AFEDMITCLCKTGRIKEACKLADGIVDR 595
I T + ++ C++G+++ A KL +V R
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 200/438 (45%), Gaps = 42/438 (9%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFL---MTVSAANSLIKSFGGLGMVEELLWVWRSM 208
+L++ L L G V ++ + + E GF +T +++ G + ELL R M
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL---RKM 254
Query: 209 KENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
+E I+ Y+ +++GL ++++ +F ME D++TYNT+I G+C G+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
+ R M R + P+ +T+ LI + EG L EM ++GI + YN +
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGV 388
I G CK + E + + MI +GC P++ + LI+ Y K +++ + +F M GV
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 389 -----------------------------------EPDEVTYGVIISGLCKNERLEEAMQ 413
PD V+Y +++ GLC N LE+A++
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 414 YFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALA 473
F + + ++ Y +I G+ A +VD+A +LF + KG D+ YN++I L
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 474 KCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAA 533
+ L +A LF++M +EG TY ILI + A +L + M G P
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADV 613
Query: 534 SFRALSIGLCLSGKVARA 551
S + I + SG++ ++
Sbjct: 614 STVKMVINMLSSGELDKS 631
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 177/356 (49%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +ID L G +D +FNE++ KGF + N+LI F G ++ + R M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
+ I P++ T++ L++ V + ++ + K M + P+ +TYN++I G+CK + +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
+A++ M ++ PD +T+ LI D L L+ EM +G+ + YN ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
G C+ GK +F+ M+ R +P++ Y L+D G + +A+ IF +++ +E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
D Y +II G+C ++++A F GV ++A Y+ +I L + + +A+ L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
F +M E+G D YN+LI A A L + M+ G V T ++IN
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 154/307 (50%), Gaps = 1/307 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
++K S N+ + LID G + + E+ ++G NSLI F +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
E + + M G +P + T+N L+NG + I+ +F+ M V + VTYNT++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIE 319
+G+C+ GK + A + F+ M +R V+PD ++Y L+ G+ + L ++ ++++ +E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 320 IPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
+ Y ++I G+C K + +F S+ +G + + Y +I + S+++A +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
F +M EG PDE+TY ++I ++ A + E +++G + +I+ L
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS- 624
Query: 440 AGRVDEA 446
+G +D++
Sbjct: 625 SGELDKS 631
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 247/495 (49%), Gaps = 11/495 (2%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
SH+L Y I+C + V ++ + G+ + +SL+ + + + +
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 204 VWRSMKENGIEPSLYTYNFLMNGL-VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G +P +T+ L++GL +++ E+ LV ++++ G PD+VTY T++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGL 233
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK G A+ + ME ++ D + Y T+I D L+L+ EMD KGI
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Y+ +I LC G+ + + MI R PNV ++ALID++ K G + EA +++
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M ++PD TY +I+G C ++RL+EA FE + N + YS+LI G KA R
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
V+E ELF EM ++G ++ Y LI + D A +FK+M G + TY I
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
L++G+ K + +A+ +++ + + P ++ + G+C +GKV ++ L+ KG
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 563 IIPET-AFEDMITCLCKTGRIKEACKLADGIVDRERE---IPGK-IRTALINALRKAGNA 617
+ P A+ MI+ C+ G +E AD ++ + +E +P LI A + G+
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEE----ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 618 DLAIKLMHSKIGVGY 632
+ + +L+ G+
Sbjct: 590 EASAELIKEMRSCGF 604
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 229/503 (45%), Gaps = 16/503 (3%)
Query: 98 LDSFCRKFLIKLS-------------PNFVSF--VLRNHDVSKRPNVGLRLFTWAARQKK 142
++ FCR+ + L+ P+ V+ +L + SKR + + L +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-EMG 183
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
Y + + +LI L L + +++ ++G + +++ G ++ L
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ + M++ IE + YN +++GL ++ + +F M+N + PDV TY+++I
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
C G+ A M R + P+ +T+ LI A EG LY EM ++ I+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Y+ +I G C + E +FE MI + C PNV Y+ LI + K + E + +F
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M G+ + VTY +I G + + A F+ + GV N + Y+ L+DGL K G+
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
+ +A +FE + D Y YN++I+ + K GK+++ LF + +G V Y
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
+I+G ++ EEA L M + G P + ++ L G + +++ E+ G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 563 IIPETAFEDMITCLCKTGRIKEA 585
+ + ++T + GR+ ++
Sbjct: 604 FAGDASTIGLVTNMLHDGRLDKS 626
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 176/357 (49%), Gaps = 6/357 (1%)
Query: 215 PSLYTYNFLMNGLVNSMFIESSELVFKV---MENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
PS+ +N L++ + + ELV + M+ + D+ TY+ I +C+ + A
Sbjct: 81 PSIVEFNKLLSAVAK---MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
+ M +PD +T +L+ ++L +M E G + + + +I G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPD 391
L K E A+ + M++RGCQP++ Y +++ K G ++ A+++ ++M+ +E D
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 392 EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE 451
V Y II GLCK + +++A+ F G+ + YSSLI L GR +A L
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 452 EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEH 511
+M+E+ + ++ LIDA K GKL EA L+ M D ++TY+ LING
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 512 RNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA 568
R +EA ++++MI K P ++ L G C + +V ++ E++ +G++ T
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 186/410 (45%), Gaps = 1/410 (0%)
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L N L + + ++ + +F M + P +V +N ++ K+ K + + M+
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
+ D TY I L++ +M + G E + ++ G C + +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
A+ + M+ G +P+ +T LI +EA+ + ++M G +PD VTYG +++GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
CK ++ A+ + + + + Y+++IDGL K +D+A LF EM KG D
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
+ Y+ LI L G+ +A L M + + V T++ LI+ KE + EA KL+D
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGR 581
MI + I P ++ +L G C+ ++ A + + + K P + +I CK R
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 582 IKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
++E +L + R T LI+ +A + D A + + VG
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 229/447 (51%), Gaps = 3/447 (0%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
SHNL Y +I+CL + + ++ + G+ ++ NSL+ F + E +
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLV-NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G +P T+ L++GL ++ E+ LV +++ G PD+VTY +I G
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGL 215
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK G+ A+ ME ++ D + Y T+I + D L+L+ EMD KGI
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Y+ +I LC G+ + + M+ R PNV + +LID++AK G + EA +F+
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M ++P+ VTY +I+G C ++RL+EA Q F + + + Y++LI+G KA +
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
V + ELF +M +G ++ Y LI + D A +FK+M +G + TY
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
L++G+ K + E+A+ +++ + + P ++ +S G+C +GKV + L+ KG
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 563 IIPET-AFEDMITCLCKTGRIKEACKL 588
+ P+ A+ MI+ CK G +EA L
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 217/461 (47%), Gaps = 27/461 (5%)
Query: 134 FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAAN---SLIK 190
++ ++K S N ++ L + + L G++ + R F + E L++ A L+
Sbjct: 27 LSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSR-PFPSIVEFSKLLSAIAKMKKFDLVI 85
Query: 191 SFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKV-- 248
SFG M+ G+ +LYTYN ++N L S+L F + GK+
Sbjct: 86 SFG------------EKMEILGVSHNLYTYNIMINCLC-----RRSQLSFALAILGKMMK 128
Query: 249 ---GPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDS 305
GP +VT N+++ G+C + +A+ M QPD +T+ TL+ +
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 188
Query: 306 CLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALID 365
++L M KG + Y VI GLCK G+ + M + + +V IY+ +ID
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 366 SYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV 425
S K +++A+N+F M +G+ PD TY +IS LC R +A + +
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 426 NAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF 485
N + ++SLID K G++ EAE+LF+EM+++ + YN LI+ +LDEA +F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 486 KRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
M + C V TY LING K + + ++L+ M +G+ ++ L G +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 546 GKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEA 585
A + ++ G+ P + ++ LCK G++++A
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 192/366 (52%), Gaps = 2/366 (0%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
+L Y ++I+ L G+ D + N++++ V +++I S V++ L ++
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 206 RSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCK 264
M GI P ++TY+ L++ L N + ++S L+ ++E K+ P+VVT+N++I + K
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAK 322
Query: 265 VGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
GK +A + F M R++ P+ +TY +LI + D ++ M K
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMK 384
YN +I G CK K ++G +F M RRG N YT LI + + + A +F++M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 385 YEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVD 444
+GV P+ +TY ++ GLCKN +LE+AM FE+ + + + + Y+ + +G+ KAG+V+
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 445 EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILI 504
+ +LF + KG D YN +I K G +EA LF +M+++G TY LI
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 505 NGMFKE 510
++
Sbjct: 563 RAHLRD 568
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 185/384 (48%)
Query: 202 LWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKG 261
L + M++ IE + Y+ +++ L ++ + +F M+N + PDV TY+++I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 262 YCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIP 321
C G+ A M R + P+ +T+ +LI A EG L+ EM ++ I+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 322 SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFE 381
YN +I G C + E IF M+ + C P+V Y LI+ + K + + + +F
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 382 RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAG 441
M G+ + VTY +I G + + A F+ ++GV N M Y++L+DGL K G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 442 RVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYT 501
++++A +FE + + D Y YN++ + + K GK+++ LF + +G V Y
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPK 561
+I+G K+ EEA L+ M + G P + ++ L G A + +++ E+
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 562 GIIPETAFEDMITCLCKTGRIKEA 585
+ + ++T + GR+ +
Sbjct: 585 RFAGDASTYGLVTDMLHDGRLDKG 608
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 188/393 (47%), Gaps = 2/393 (0%)
Query: 90 GSSDMEANLDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLEC 149
G D+ NL + K I+ S V+ + + + L LFT K ++
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT-EMDNKGIRPDVFT 277
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y SLI CL G + +++ E+ V NSLI +F G + E ++ M
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
+ I+P++ TYN L+NG ++ ++ +F +M + PDVVTYNT+I G+CK K
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
ME FR M R + + +TY TLI + D D+ ++ +M G+ YN ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
GLCK GK + +FE + + +P++ Y + + K G + + ++F + +GV+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
PD + Y +ISG CK EEA F + +G ++ Y++LI + G + EL
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEAL 482
+EM D+ Y ++ D L G+LD+
Sbjct: 578 IKEMRSCRFAGDASTYGLVTDMLHD-GRLDKGF 609
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 5/295 (1%)
Query: 337 KCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYG 396
K E +F M++ P++ ++ L+ + AK+ + I+ E+M+ GV + TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 397 VIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEK 456
++I+ LC+ +L A+ G + + +SL++G R+ EA L ++MVE
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 457 GCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEA 516
G D+ + L+ L + K EA+AL +RM +GC + TY +ING+ K + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 517 LKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITC 575
L L + M I + + LC V A + E+ KGI P+ + +I+C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 576 LCKTGRIKEACKLADGIVDREREIPGKIRT--ALINALRKAGNADLAIKLMHSKI 628
LC GR +A +L ++ ER+I + T +LI+A K G A KL I
Sbjct: 285 LCNYGRWSDASRLLSDML--ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 228/448 (50%), Gaps = 7/448 (1%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +LI L+ C V+ + E+ G + N +I + E + M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
G P TY +LMNGL +++++ +F + P++V +NT+I G+ G+
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLD 370
Query: 270 KAMEKFRAM-EARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
A M + + PD TY +LI + EG L + H+M KG + ++Y ++
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGV 388
+ G CK+GK E + + M G +PN + LI ++ K + EA+ IF M +G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 389 EPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEE 448
+PD T+ +ISGLC+ + ++ A+ + GV N + Y++LI+ + G + EA +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 449 LFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMF 508
L EMV +G P D YN LI L + G++D+A +LF++M +G + + ILING+
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 509 KEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET- 567
+ EEA++ M+ +G TP +F +L GLC +G++ + +L +GI P+T
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 568 AFEDMITCLCKTGRIKEACKLAD-GIVD 594
F +++ LCK G + +AC L D GI D
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIED 698
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 238/508 (46%), Gaps = 7/508 (1%)
Query: 128 NVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANS 187
+ + LF+W Q Y H+ + Y LI L G+ + + ++K++G + S S
Sbjct: 92 STSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFIS 151
Query: 188 LIKSFGGLGMVEELLWVWRSMKE-NGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENG 246
+++ + G + + M+ EP+ +YN ++ LV+ + + VF M +
Sbjct: 152 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR 211
Query: 247 KVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSC 306
K+ P + T+ ++K +C V + A+ R M P+ + Y TLI + +
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 307 LSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDS 366
L L EM G + +N VI GLCK + E + M+ RG P+ Y L++
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 367 YAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF-EFCRANGVAV 425
K+G ++ A ++F R+ +P+ V + +I G + RL++A + + G+
Sbjct: 332 LCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 426 NAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF 485
+ Y+SLI G K G V A E+ +M KGC + Y Y +L+D K GK+DEA +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 486 KRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
M +G + LI+ KEHR EA++++ M KG P +F +L GLC
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 546 GKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIR 604
++ A +L ++ +G++ T + +I + G IKEA KL + +V + +
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 605 TALINALRKAGNADLAIKLMHSKIGVGY 632
+LI L +AG D A L + G+
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 5/390 (1%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y L++ L G VD + +F + + ++ N+LI F G +++ V M
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 210 EN-GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
+ GI P + TYN L+ G + + V M N P+V +Y ++ G+CK+GK
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
+A M A ++P+ + + LI A E + ++ EM KG + + +N +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGV 388
I GLC+V + + MI G N Y LI+++ + G + EA + M ++G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 389 EPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEE 448
DE+TY +I GLC+ +++A FE +G A + + + LI+GL ++G V+EA E
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 449 LFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMF 508
+EMV +G D +N LI+ L + G++++ L +F++++ EG T+ L++ +
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 509 KEHRNEEALKLWDMMIDKGITPTAASFRAL 538
K +A L D I+ G P ++ L
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 181/360 (50%), Gaps = 1/360 (0%)
Query: 152 SLIDCLALCGDVDRVRLVFNEL-KEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKE 210
+LI G +D + V +++ G + V NSLI + G+V L V M+
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 211 NGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQK 270
G +P++Y+Y L++G I+ + V M + P+ V +N +I +CK + +
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 271 AMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIG 330
A+E FR M + +PD T+ +LI + L L +M +G+ + YN +I
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 331 GLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEP 390
+ G+ E + M+ +G + Y +LI + G +++A ++FE+M +G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 391 DEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELF 450
++ ++I+GLC++ +EEA+++ + G + + ++SLI+GL +AGR+++ +F
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 451 EEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKE 510
++ +G P D+ +N L+ L K G + +A L ++G T++IL+ + +
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 158/311 (50%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
V ++++ KG V + L+ F LG ++E V M +G++P+ +N L++
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 229 NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKI 288
I + +F+ M PDV T+N++I G C+V + + A+ R M + V + +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 289 TYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESM 348
TY TLI A G+ L +EM +G + YN +I GLC+ G+ + ++FE M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 349 IRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERL 408
+R G P+ LI+ + G + EA+ + M G PD VT+ +I+GLC+ R+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 409 EEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVL 468
E+ + F +A G+ + + +++L+ L K G V +A L +E +E G + +++L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 469 IDALAKCGKLD 479
+ ++ LD
Sbjct: 711 LQSIIPQETLD 721
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 146/299 (48%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
R K N+ Y L+D G +D V NE+ G N LI +F +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
E + ++R M G +P +YT+N L++GL I+ + + + M + V + VTYNT+
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I + + G+ ++A + M + D+ITY +LI+ G+ D SL+ +M G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
+ + N++I GLC+ G E + M+ RG P++ + +LI+ + G + + +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGL 437
+F +++ EG+ PD VT+ ++S LCK + +A + +G N +S L+ +
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 250/511 (48%), Gaps = 9/511 (1%)
Query: 132 RLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKS 191
++F A + + S+I+ A GD D V + + ++ + ++ + + ++
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRA 121
Query: 192 FGGLGMVEELLWVWRSM-KENGIEPSLYTYNFLMNGLVNSMF----IESSELVFKVMENG 246
+G + ++ + ++ M E + S+ ++N ++N ++N +E + V N
Sbjct: 122 YGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM 181
Query: 247 KVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSC 306
+ P+ +++N +IK CK+ +A+E FR M R PD TY TL+ E D
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 307 LSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDS 366
+ L EM +G YN++I GLCK G + ++M +GC PN Y LI
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 367 YAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVN 426
G +++A+++ ERM P++VTYG +I+GL K R +A++ G +N
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 427 AMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFK 486
YS LI GL K G+ +EA L+ +M EKGC + Y+VL+D L + GK +EA +
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 487 RMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSG 546
RM GC YTY+ L+ G FK EEA+++W M G + + L GLC G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 547 KVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRE--REIPGKI 603
+V A + ++ GI P+T A+ +I LC G + A KL ++ +E + P +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 604 R-TALINALRKAGNADLAIKLMHSKIGVGYD 633
L++ L + A+ L++S + G D
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 211/440 (47%), Gaps = 18/440 (4%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +L+D L +D L+ +E++ +G + N LI G + + + +M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
G P+ TYN L++GL ++ + + + M + K P+ VTY T+I G K +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A+ +ME R ++ Y LI + EG + +SL+ +M EKG + Y++++
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
GLC+ GK E I MI GC PN Y++L+ + K G EA+ +++ M G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
++ Y V+I GLC R++EAM + G+ + + YSS+I GL G +D A +L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 450 FEEMVEKGCPR---DSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
+ EM+ + P+ D YN+L+D L + A+ L M D GCD V T +N
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE 566
+ ++ + DKG + L + L +V+ AC I++ + K + P+
Sbjct: 585 LSEKSNS----------CDKG----RSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPK 630
Query: 567 TAFEDMITC-LCKTGRIKEA 585
T+ MI +CK +I A
Sbjct: 631 TSTWAMIVREICKPKKINAA 650
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 17/236 (7%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
N Y SL+ G + V+ E+ + G + LI G+G V+E + VW
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVM---ENGKVGPDVVTYNTMIKGY 262
M GI+P Y+ ++ GL ++++ ++ M E K PDVVTYN ++ G
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
C +A++ +M R PD IT T + L +SC ++E + +
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT--LSEKSNSCDKGRSFLEELVVRLLK 608
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
+ G C I E M+ + P + + ++ K +N AI+
Sbjct: 609 RQR---VSGAC---------TIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 211/416 (50%), Gaps = 38/416 (9%)
Query: 212 GIEPSLYTYNFLMNGL-VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQK 270
G EP T+N L+ GL + E+ LV +++ENG PDVVTYN+++ G C+ G T
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSL 211
Query: 271 AMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIG 330
A++ R ME RNV+ D TY T+I + +G D+ +SL+ EM+ KGI+ YN ++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 331 GLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEP 390
GLCK GK +G + + M+ R PNV + L+D + K G + EA +++ M G+ P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 391 DEVTYGVIISGLCKNERLEEA-----------------------------------MQYF 415
+ +TY ++ G C RL EA M+ F
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
G+ NA+ YS L+ G ++G++ AEELF+EMV G D Y +L+D L
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 476 GKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 535
GKL++AL +F+ ++ D + YT +I GM K + E+A L+ + KG+ P ++
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 536 RALSIGLCLSGKVARACKILDELAPKGIIP-ETAFEDMITCLCKTGRIKEACKLAD 590
+ GLC G ++ A +L ++ G P + + +I + G + + KL +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 220/443 (49%)
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
Y + + +LI L L G V ++ + + E G V NS++ G L
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ R M+E ++ ++TY+ +++ L I+++ +FK ME + VVTYN++++G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK GK + M +R + P+ IT+ L+ EG LY EM +GI
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
YN ++ G C + E + + + M+R C P++ +T+LI Y + +++ + +F
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
+ G+ + VTY +++ G C++ +++ A + F+ ++GV + M Y L+DGL G+
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
+++A E+FE++ + Y +I+ + K GK+++A LF + +G V TYT+
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
+I+G+ K+ EA L M + G P ++ L G + + K+++E+ G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 563 IIPETAFEDMITCLCKTGRIKEA 585
+ + M+ + +G + ++
Sbjct: 574 FSADASSIKMVIDMLLSGELDKS 596
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 189/387 (48%), Gaps = 1/387 (0%)
Query: 241 KVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLE 300
K +E + ++ T N MI +C+ KT A + +PD T+ TLI+ +LE
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 301 GDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIY 360
G + L M E G + YN ++ G+C+ G + M R + +V Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 361 TALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRA 420
+ +IDS + G ++ AI++F+ M+ +G++ VTY ++ GLCK + + + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 421 NGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDE 480
+ N + ++ L+D K G++ EA EL++EM+ +G + YN L+D +L E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 481 ALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSI 540
A + M C + T+T LI G R ++ +K++ + +G+ A ++ L
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 541 GLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREI 599
G C SGK+ A ++ E+ G++P+ + ++ LC G++++A ++ + + + ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 600 PGKIRTALINALRKAGNADLAIKLMHS 626
+ T +I + K G + A L S
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 182/422 (43%), Gaps = 8/422 (1%)
Query: 213 IEPSLYTYNFLMNGLVNSM--FIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQK 270
I+P L L L+ ++ F S E F + NG V + ++ K
Sbjct: 17 IQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNV-----CFRERLRSGIVDIKKDD 71
Query: 271 AMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIG 330
A+ F+ M P + + A F+ L +++ GI + N++I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 331 GLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEP 390
C+ K +++ +++ G +P+ + LI G ++EA+ + +RM G +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 391 DEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELF 450
D VTY I++G+C++ A+ V + YS++ID L + G +D A LF
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 451 EEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKE 510
+EM KG YN L+ L K GK ++ L K M V T+ +L++ KE
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 511 HRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAF 569
+ +EA +L+ MI +GI+P ++ L G C+ +++ A +LD + P+ F
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 570 EDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIG 629
+I C R+ + K+ I R + L+ ++G LA +L +
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 630 VG 631
G
Sbjct: 432 HG 433
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 44/303 (14%)
Query: 109 LSPNFVSF--VLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRV 166
+SPN +++ ++ + + R + + R K S ++ + SLI + VD
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 167 RLVFNELKEKGFLMTVSAANSLIKSF---GGLGMVEELLWVWRSMKENGIEPSLYTYNFL 223
VF + ++G + + L++ F G + + EEL ++ M +G+ P + TY L
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL---FQEMVSHGVLPDVMTYGIL 444
Query: 224 MNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV 283
++GL ++ +E + +F+ ++ K+ +V Y T+I+G CK GK + A F ++ + V
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 284 QPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343
+P+ +TY ++I GLCK G E +
Sbjct: 505 KPNVMTY-----------------------------------TVMISGLCKKGSLSEANI 529
Query: 344 IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLC 403
+ M G PN Y LI ++ + G + + + E MK G D + ++I L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Query: 404 KNE 406
E
Sbjct: 590 SGE 592
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 211/426 (49%)
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
Y N+ SL++ + + +++ G+ N+LI E +
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M G +P L TY ++NGL + + + ME GK+ P V+ YNT+I G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK A+ F+ ME + ++P+ +TY +LI G + L +M E+ I
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
++ +I K GK +E +++ M++R P++ Y++LI+ + ++EA +FE
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M + PD VTY +I G CK +R+EE M+ F G+ N + Y+ LI GL +AG
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
D A+E+F+EMV G P + YN L+D L K GKL++A+ +F+ ++ + T+YTY I
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
+I GM K + E+ L+ + KG+ P ++ + G C G A + E+ G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 563 IIPETA 568
+P +
Sbjct: 567 TLPNSG 572
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 242/519 (46%), Gaps = 37/519 (7%)
Query: 103 RKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGD 162
R F K S ++ + RN + + + LF + + + +E + L+ +A
Sbjct: 38 RAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNK 96
Query: 163 VDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNF 222
D V + +++ G + LI F + L V M + G EP++ T +
Sbjct: 97 FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L+NG +S I + + M P+ VT+NT+I G K +AM M A+
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
QPD +TY ++ GD D +L ++M++ +E YN +I GLCK +
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 343 AIFESMIRRGCQPNVAIY-----------------------------------TALIDSY 367
+F+ M +G +PNV Y +ALID++
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 368 AKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNA 427
K G + EA +++ M ++P VTY +I+G C ++RL+EA Q FEF + +
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 428 MFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKR 487
+ Y++LI G K RV+E E+F EM ++G ++ YN+LI L + G D A +FK
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 488 MEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGK 547
M +G + TY L++G+ K + E+A+ +++ + + PT ++ + G+C +GK
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 548 VARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEA 585
V + L+ KG+ P+ A+ MI+ C+ G +EA
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 205/443 (46%)
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
Y N + +LI L L + + + KG + ++ G +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M++ +EP + YN +++GL ++ + +FK ME + P+VVTY+++I
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
C G+ A M R + PD T+ LI A EG LY EM ++ I+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Y+ +I G C + E +FE M+ + C P+V Y LI + K + E + +F
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M G+ + VTY ++I GL + + A + F+ ++GV N M Y++L+DGL K G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
+++A +FE + Y YN++I+ + K GK+++ LF + +G V Y
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
+I+G ++ EEA L+ M + G P + + L G + +++ E+ G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 563 IIPETAFEDMITCLCKTGRIKEA 585
+ + ++T + GR+ ++
Sbjct: 602 FAGDASTIGLVTNMLHDGRLDKS 624
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 193/396 (48%), Gaps = 1/396 (0%)
Query: 111 PNFVSFVLRNHDVSKRPNVGLRL-FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLV 169
P+ V++ + + + KR + L Q K + Y ++ID L +D +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 170 FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVN 229
F E++ KG V +SLI G + + M E I P ++T++ L++ V
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 230 SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKIT 289
+ +E ++ M + P +VTY+++I G+C + +A + F M +++ PD +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 290 YMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMI 349
Y TLI+ + + ++ EM ++G+ + YN++I GL + G C IF+ M+
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 350 RRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLE 409
G PN+ Y L+D K G + +A+ +FE ++ +EP TY ++I G+CK ++E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 410 EAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLI 469
+ F GV + + Y+++I G + G +EA+ LF+EM E G +S CYN LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 470 DALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
A + G + + L K M G T ++ N
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 11/301 (3%)
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
A+F M++ P++ ++ L+ + AK+ + I++ E+M+ G+ + TY ++I+
Sbjct: 67 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 126
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
C+ +L A+ G N + SSL++G + R+ EA L ++M G ++
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
+N LI L K EA+AL RM +GC + TY +++NG+ K + A L +
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGR 581
M + P + + GLC + A + E+ KGI P + +I+CLC GR
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 582 IKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKRR 641
+A +L +++R+ +ALI+A K G A KL YD M +KR
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL--------YDEM--VKRS 356
Query: 642 V 642
+
Sbjct: 357 I 357
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 211/402 (52%), Gaps = 3/402 (0%)
Query: 186 NSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL-VNSMFIESSELVFKVME 244
++L+ F G V E + + M E P L T + L+NGL + E+ L+ +++E
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 245 NGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFD 304
G PD VTY ++ CK G + A++ FR ME RN++ + Y +I + +G FD
Sbjct: 204 YG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 305 SCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALI 364
LSL++EM+ KGI+ Y+ +IGGLC GK +G + MI R P+V ++ALI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 365 DSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVA 424
D + K G + EA ++ M G+ PD +TY +I G CK L EA Q F+ + G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 425 VNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALAL 484
+ + YS LI+ KA RVD+ LF E+ KG ++ YN L+ + GKL+ A L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 485 FKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCL 544
F+ M G +V TY IL++G+ +AL++++ M +T + + G+C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 545 SGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEA 585
+ KV A + L+ KG+ P+ + MI LCK G + EA
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 215/432 (49%), Gaps = 11/432 (2%)
Query: 201 LLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENG---KVG--PDVVTY 255
+L + M+ NGIE +YT ++N + +L+F G K+G PD +T+
Sbjct: 89 VLGFCKGMELNGIEHDMYTMTIMIN-----CYCRKKKLLFAFSVLGRAWKLGYEPDTITF 143
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
+T++ G+C G+ +A+ M +PD +T TLI L+G L L M E
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
G + Y V+ LCK G +F M R + +V Y+ +IDS K GS ++
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
A+++F M+ +G++ D VTY +I GLC + + ++ + + + + +S+LID
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
K G++ EA+EL+ EM+ +G D+ YN LID K L EA +F M +GC+
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
+ TY+ILIN K R ++ ++L+ + KG+ P ++ L +G C SGK+ A ++
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 556 DELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKA 614
E+ +G+ P + ++ LC G + +A ++ + + + I +I+ + A
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 615 GNADLAIKLMHS 626
D A L S
Sbjct: 504 SKVDDAWSLFCS 515
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 198/387 (51%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
+LI+ L L G V ++ + + E GF ++ G L ++R M+E
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
I+ S+ Y+ +++ L + + +F ME + DVVTY+++I G C GK
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
+ R M RN+ PD +T+ LI EG LY+EM +GI + YN +I G
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPD 391
CK E + +F+ M+ +GC+P++ Y+ LI+SY K +++ + +F + +G+ P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 392 EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE 451
+TY ++ G C++ +L A + F+ + GV + + Y L+DGL G +++A E+FE
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 452 EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEH 511
+M + YN++I + K+D+A +LF + D+G V TY ++I G+ K+
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 512 RNEEALKLWDMMIDKGITPTAASFRAL 538
EA L+ M + G TP ++ L
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 1/360 (0%)
Query: 267 KTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYN 326
K A++ F +M P I + L A +D L M+ GIE +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 327 LVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYE 386
++I C+ K + ++ + G +P+ ++ L++ + G ++EA+ + +RM
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 387 GVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEA 446
PD VT +I+GLC R+ EA+ + G + + Y +++ L K+G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
+LF +M E+ Y+++ID+L K G D+AL+LF ME +G V TY+ LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE 566
+ + + ++ K+ MI + I P +F AL GK+ A ++ +E+ +GI P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 567 T-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMH 625
T + +I CK + EA ++ D +V + E + LIN+ KA D ++L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 245/511 (47%), Gaps = 18/511 (3%)
Query: 132 RLFTWAARQKKY---------------SHNLECYISLIDCLALCGDVDRVRLVFNELKEK 176
RLF+ AR K+Y +HNL +I+C C + ++ +
Sbjct: 77 RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL 136
Query: 177 GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL-VNSMFIES 235
G+ ++LI G V E L + M E G +P+L T N L+NGL +N ++
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 236 SELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
L+ +++E G P+ VTY ++K CK G+T AME R ME R ++ D + Y +I
Sbjct: 197 VLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
+G D+ +L++EM+ KG + Y +I G C G+ +G + MI+R P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
+V ++ALID + K G + EA + + M G+ PD VTY +I G CK +L++A
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
+ + G N ++ LI+G KA +D+ ELF +M +G D+ YN LI +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 476 GKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 535
GKL+ A LF+ M + +Y IL++G+ E+AL++++ + + +
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 536 RALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVD 594
+ G+C + KV A + L KG+ P+ + MI LCK G + EA L + +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 595 REREIPGKIRTALINALRKAGNADLAIKLMH 625
G LI A G+A + KL+
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 209/434 (48%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
+L++ L L G V L+ + + E GF ++K G + + R M+E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
I+ Y+ +++GL ++++ +F ME D++ Y T+I+G+C G+
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
+ R M R + PD + + LI EG L+ EM ++GI + Y +I G
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPD 391
CK + + + + + M+ +GC PN+ + LI+ Y K +++ + +F +M GV D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 392 EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE 451
VTY +I G C+ +LE A + F+ + V + + Y L+DGL G ++A E+FE
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 452 EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEH 511
++ + D YN++I + K+D+A LF + +G V TY I+I G+ K+
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Query: 512 RNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFED 571
EA L+ M + G +P ++ L G ++ K+++E+ G + +
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 572 MITCLCKTGRIKEA 585
M+ + GR+K++
Sbjct: 602 MVVDMLSDGRLKKS 615
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 177/393 (45%), Gaps = 36/393 (9%)
Query: 239 VFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACY 298
+F+ M + P ++ ++ + + + ++ + ME + + + T +I C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 299 LEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVA 358
S ++ + G E + ++ +I GLC G+ E + + M+ G +P +
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 359 IYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYG---------------------- 396
AL++ G +++A+ + +RM G +P+EVTYG
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 397 -------------VIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRV 443
+II GLCK+ L+ A F G + + Y++LI G AGR
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 444 DEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTIL 503
D+ +L +M+++ D ++ LID K GKL EA L K M G TYT L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 504 INGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI 563
I+G KE++ ++A + D+M+ KG P +F L G C + + ++ +++ +G+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 564 IPET-AFEDMITCLCKTGRIKEACKLADGIVDR 595
+ +T + +I C+ G+++ A +L +V R
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 188/414 (45%), Gaps = 15/414 (3%)
Query: 224 MNGLVNSMFIESSEL-----------VFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAM 272
M GL+ + +E+ L VF + +GK V+Y ++ K A+
Sbjct: 1 MRGLIQTRLLETGTLRTALFLSCYGRVFSSVSDGK---GKVSYRERLRSGIVDIKEDDAV 57
Query: 273 EKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGL 332
+ F+ M +P I + L +D L L +M+ KGI + +++I
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 333 CKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDE 392
C+ K + +I+ G +P+ ++ LI+ G ++EA+ + +RM G +P
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 393 VTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEE 452
+T +++GLC N ++ +A+ + G N + Y ++ + K+G+ A EL +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 453 MVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHR 512
M E+ D+ Y+++ID L K G LD A LF ME +G + YT LI G R
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 513 NEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFED 571
++ KL MI + ITP +F AL GK+ A ++ E+ +GI P+T +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 572 MITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMH 625
+I CK ++ +A + D +V + + LIN KA D ++L
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 1/342 (0%)
Query: 141 KKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEE 200
K + ++ Y +LI G D + ++ ++ V A ++LI F G + E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 201 LLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIK 260
+ + M + GI P TY L++G ++ + + +M + GP++ T+N +I
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 261 GYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEI 320
GYCK +E FR M R V D +TY TLIQ G + L+ EM + +
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 321 PSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIF 380
+Y +++ GLC G+ + IFE + + + ++ IY +I +++A ++F
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 381 ERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKA 440
+ +GV+PD TY ++I GLCK L EA F +G + N Y+ LI
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 441 GRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEAL 482
G ++ +L EE+ G D+ +++D L+ G+L ++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKSF 616
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 157/307 (51%), Gaps = 1/307 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
++K + ++ + +LIDC G + + E+ ++G SLI F ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
+ + M G P++ T+N L+NG + I+ +F+ M V D VTYNT+I
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIE 319
+G+C++GK + A E F+ M +R V+PD ++Y L+ G+ + L ++ ++++ +E
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 320 IPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
+ YN++I G+C K + +F S+ +G +P+V Y +I K GS++EA +
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
F +M+ +G P+ TY ++I ++ + E + G +V+A ++D L
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Query: 440 AGRVDEA 446
GR+ ++
Sbjct: 610 -GRLKKS 615
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 208/412 (50%), Gaps = 1/412 (0%)
Query: 170 FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVN 229
F L+ KGF +++ A N+LI S +G VE V++ + +G+ ++YT N ++N L
Sbjct: 188 FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCK 247
Query: 230 SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKIT 289
+E ++ V PD+VTYNT+I Y G ++A E AM + P T
Sbjct: 248 DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 290 YMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMI 349
Y T+I G ++ ++ EM G+ S Y ++ CK G +E +F M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 350 RRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLE 409
R P++ +++++ + + G++++A+ F +K G+ PD V Y ++I G C+ +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 410 EAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLI 469
AM G A++ + Y++++ GL K + EA++LF EM E+ DSY +LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 470 DALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGIT 529
D K G L A+ LF++M+++ V TY L++G K + A ++W M+ K I
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 530 PTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAF-EDMITCLCKTG 580
PT S+ L LC G +A A ++ DE+ K I P MI C++G
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 237/511 (46%), Gaps = 7/511 (1%)
Query: 129 VGLRLFTWAARQK--KYSHNLECYISLIDCLALC--GDVDRVRLVFNELKEKGFLMTVSA 184
+G W Q+ + + Y I ALC G +++V ++++EKG +
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272
Query: 185 ANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVME 244
N+LI ++ G++EE + +M G P +YTYN ++NGL E ++ VF M
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 245 NGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFD 304
+ PD TY +++ CK G + + F M +R+V PD + + +++ G+ D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 305 SCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALI 364
L ++ + E G+ + Y ++I G C+ G + M+++GC +V Y ++
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 365 DSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVA 424
K + EA +F M + PD T ++I G CK L+ AM+ F+ + +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 425 VNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALAL 484
++ + Y++L+DG GK G +D A+E++ +MV K Y++L++AL G L EA +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 485 FKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCL 544
+ M + TV +I G + + + MI +G P S+ L G
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 545 SGKVARACKILDELAPK--GIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPG 601
+++A ++ ++ + G++P+ + ++ C+ ++KEA + +++R
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 602 KIRTALINALRKAGNADLAIKLMHSKIGVGY 632
T +IN N A ++ + G+
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 1/451 (0%)
Query: 183 SAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKV 242
S + LI+++ + E + ++ G S+ N L+ LV ++E + V++
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 243 MENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGD 302
+ VG +V T N M+ CK GK +K ++ + V PD +TY TLI A +G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 303 FDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTA 362
+ L + M KG + YN VI GLCK GK +F M+R G P+ Y +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 363 LIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANG 422
L+ K G + E +F M+ V PD V + ++S ++ L++A+ YF + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 423 VAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEAL 482
+ + + Y+ LI G + G + A L EM+++GC D YN ++ L K L EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 483 ALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGL 542
LF M + YT TILI+G K + A++L+ M +K I ++ L G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 543 CLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPG 601
G + A +I ++ K I+P ++ ++ LC G + EA ++ D ++ + +
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 602 KIRTALINALRKAGNADLAIKLMHSKIGVGY 632
I ++I ++GNA + I G+
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 33/392 (8%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
R + +L C+ S++ G++D+ + FN +KE G + LI+ + GM+
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ + M + G + TYN +++GL + ++ +F M + PD T +
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I G+CK+G Q AME F+ M+ + ++ D +TY TL+ GD D+ ++ +M K I
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
+Y++++ LC G E +++ MI + +P V I ++I Y + G+ ++ +
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
E+M EG PD ++Y +I G + E + +A
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAF-------------------------- 640
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY 498
G V + EE + G D + YN ++ + ++ EA + ++M + G +
Sbjct: 641 --GLVKKMEE-----EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 499 TYTILINGMFKEHRNEEALKLWDMMIDKGITP 530
TYT +ING + EA ++ D M+ +G +P
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 172/373 (46%), Gaps = 1/373 (0%)
Query: 249 GPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLS 308
G + ++ +I+ Y + K ++A E F + ++ LI + G +
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 309 LYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYA 368
+Y E+ G+ I + N+++ LCK GK + + +G P++ Y LI +Y+
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 369 KLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAM 428
G M EA + M +G P TY +I+GLCK+ + E A + F +G++ ++
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 429 FYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRM 488
Y SL+ K G V E E++F +M + D C++ ++ + G LD+AL F +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 489 EDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKV 548
++ G YTILI G ++ A+ L + M+ +G ++ + GLC +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 549 ARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTAL 607
A K+ +E+ + + P++ +I CK G ++ A +L + ++ + L
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 608 INALRKAGNADLA 620
++ K G+ D A
Sbjct: 522 LDGFGKVGDIDTA 534
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 18/312 (5%)
Query: 98 LDSFCRKFLIKLSPNFVSFVLRN-------------HDVSKRPNVGL--RLFTWAARQKK 142
+ +CRK +I ++ N + +L+ H + KR +G +LF +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
+ + I LID G++ +F ++KEK + V N+L+ FG +G ++
Sbjct: 477 FPDSYTLTI-LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+W M I P+ +Y+ L+N L + + + V+ M + + P V+ N+MIKGY
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE-KGIEIP 321
C+ G M + PD I+Y TLI E + L +M+E +G +P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 322 S-HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIF 380
YN ++ G C+ + E + MI RG P+ + YT +I+ + ++ EA I
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 381 ERMKYEGVEPDE 392
+ M G PD+
Sbjct: 716 DEMLQRGFSPDD 727
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 151/342 (44%), Gaps = 23/342 (6%)
Query: 313 MDEKGIEIP-----SHAYNLVIGGLCKVGKCIEGHAIFESMIRRG--------------- 352
+D+ G P S + + +I L + G+ + + MIRR
Sbjct: 99 VDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTF 158
Query: 353 --CQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEE 410
C N +++ LI +Y + + EA F ++ +G +I L + +E
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 411 AMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLID 470
A ++ +GV +N + +++ L K G++++ ++ EKG D YN LI
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 471 ALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITP 530
A + G ++EA L M +G VYTY +ING+ K + E A +++ M+ G++P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 531 TAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLA 589
+ ++R+L + C G V K+ ++ + ++P+ F M++ ++G + +A
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 590 DGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
+ + + I T LI + G +A+ L + + G
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 241/507 (47%), Gaps = 21/507 (4%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
N+ Y LID L ++ R + ++ EKG + V N+LI + GM+E+ + V
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKV 265
M+ + P+ TYN L+ G S ++ ++ K++E KV PDVVTYN++I G C+
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRS 475
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
G A M R + PD+ TY ++I + + L+ +++KG+ Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKY 385
+I G CK GK E H + E M+ + C PN + ALI G + EA + E+M
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
G++P T ++I L K+ + A F+ ++G +A Y++ I + GR+ +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 446 AEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
AE++ +M E G D + Y+ LI G+ + A + KRM D GC+ + +T+ LI
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 506 GMF-----KEHRNEEAL-------------KLWDMMIDKGITPTAASFRALSIGLCLSGK 547
+ K+ +E L +L + M++ +TP A S+ L +G+C G
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 548 VARACKILDELA-PKGIIP-ETAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRT 605
+ A K+ D + +GI P E F +++C CK + EA K+ D ++ +
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 606 ALINALRKAGNADLAIKLMHSKIGVGY 632
LI L K G + + + + GY
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQCGY 862
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 248/566 (43%), Gaps = 64/566 (11%)
Query: 109 LSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCL---ALCGDVDR 165
+SP+ VS + + P L W ++ +Y H++ Y SL+ L G V +
Sbjct: 88 ISPSHVSSLF---SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFK 144
Query: 166 VRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYT-----Y 220
+RL+ +IKS +G +L + R M ++ Y Y
Sbjct: 145 IRLL------------------MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCY 186
Query: 221 NFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEA 280
N L+N L ++ + V+ M KV P++ TYN M+ GYCK+G ++A + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 281 RNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIE 340
+ PD TY +LI D DS +++EM KG AY +I GLC + E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 341 GHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIIS 400
+F M C P V YT LI S +EA+N+ + M+ G++P+ TY V+I
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 401 GLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE--------- 451
LC + E+A + G+ N + Y++LI+G K G +++A ++ E
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 452 -------------------------EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFK 486
+M+E+ D YN LID + G D A L
Sbjct: 427 NTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 487 RMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSG 546
M D G +TYT +I+ + K R EEA L+D + KG+ P + AL G C +G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 547 KVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRT 605
KV A +L+++ K +P + F +I LC G++KEA L + +V + T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 606 ALINALRKAGNADLAIKLMHSKIGVG 631
LI+ L K G+ D A + G
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSG 632
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 202/446 (45%), Gaps = 19/446 (4%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
++K ++ Y SLID G+ D + + + ++G + S+I S VE
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
E ++ S+++ G+ P++ Y L++G + ++ + L+ + M + P+ +T+N +I
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIE 319
G C GK ++A M +QP T LI +GDFD S + +M G +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 320 IPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
+H Y I C+ G+ ++ + M G P++ Y++LI Y LG N A ++
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
+RM+ G EP + T+ +I L + + ++ E C + N M + +++
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS----NMMEFDTVV----- 745
Query: 440 AGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRME-DEGCDQTVY 498
EL E+MVE ++ Y LI + + G L A +F M+ +EG +
Sbjct: 746 --------ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 499 TYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDEL 558
+ L++ K ++ EA K+ D MI G P S + L GL G+ R + L
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 559 APKGIIP-ETAFEDMITCLCKTGRIK 583
G E A++ +I + K G ++
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVE 883
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 172/402 (42%), Gaps = 20/402 (4%)
Query: 124 SKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVS 183
SKR LF + QK + N+ Y +LID G VD L+ ++ K L
Sbjct: 510 SKRVEEACDLFD-SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 184 AANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVM 243
N+LI G ++E + M + G++P++ T L++ L+ + + F+ M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 244 ENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDF 303
+ PD TY T I+ YC+ G+ A + M V PD TY +LI+ G
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 304 DSCLSLYHEMDEKGIEIPSHAYNLVIGGL---------------CKVGKCIEGHAI---F 345
+ + M + G E H + +I L C + +E +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 346 ESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERM-KYEGVEPDEVTYGVIISGLCK 404
E M+ PN Y LI ++G++ A +F+ M + EG+ P E+ + ++S CK
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 405 NERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYC 464
++ EA + + G LI GL K G + +F+ +++ G D
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 465 YNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
+ ++ID + K G ++ LF ME GC + TY++LI G
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 245/534 (45%), Gaps = 50/534 (9%)
Query: 128 NVGLRLFTWAARQKKYSHNLECYISLIDCLA---LCGDVDRVRLVFNELKEKGFLMTVSA 184
NV ++ F WA +++ + H+ Y++LI CL L G++ R E+ ++ +VS
Sbjct: 107 NVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYR---TIQEVVRNTYV-SVSP 162
Query: 185 A--NSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKV 242
A + L+K+ G MV + L V+ K +P+ TYN ++ L+ E V+
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 243 MEN-GKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEG 301
M N G PD +TY+ +I Y K+G+ A+ F M+ +QP + Y TL+ + G
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 302 DFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYT 361
+ L L+ EM G + Y +I GL K G+ E + ++ M+R G P+V
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 362 ALIDSYAKLGSMNEAINI------------------------------------FERMKY 385
L++ K+G + E N+ F++MK
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
+ V P E TY ++I G CK R+E+A+ E G Y SLI+ LGKA R +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 446 AEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
A ELF+E+ E S Y V+I KCGKL EA+ LF M+++G VY Y L++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 506 GMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIP 565
GM K EA L M + G S + G +G RA ++ + + GI P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 566 E-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNAD 618
+ + ++ C G +EA ++ + D+ E +++++A+ GN D
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVD 633
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 232/478 (48%), Gaps = 36/478 (7%)
Query: 182 VSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFK 241
V + ++I F G ++ + M + GI P + TYN ++ L + ++ + V
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 242 VMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEG 301
M V PD +TYN+++ GYC G+ ++A+ + M + V+PD +TY L+ G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 302 DFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYT 361
++ M ++G++ Y ++ G G +E H + + M+R G P+ +++
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 362 ALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFE----- 416
LI +YAK G +++A+ +F +M+ +G+ P+ VTYG +I LCK+ R+E+AM YFE
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 417 ---------------FCRAN---------------GVAVNAMFYSSLIDGLGKAGRVDEA 446
C N G+ +N +F++S+ID K GRV E+
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 495
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
E+LFE MV G + YN LI+ GK+DEA+ L M G TY+ LING
Sbjct: 496 EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI-IP 565
K R E+AL L+ M G++P ++ + GL + + A A ++ + G I
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 566 ETAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKL 623
+ + ++ LCK +A ++ + + ++ + +I+AL K G D A L
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 218/439 (49%), Gaps = 9/439 (2%)
Query: 158 ALCGD---VDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN--- 211
LC D D + +V + E G + V + N L+K +E L + M ++
Sbjct: 131 GLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
G P + +Y ++NG + + + M + + PDVVTYN++I CK KA
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
ME M V PD +TY +++ G + +M G+E Y+L++
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPD 391
LCK G+C+E IF+SM +RG +P + Y L+ YA G++ E + + M G+ PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 392 EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE 451
+ ++I K ++++AM F R G+ NA+ Y ++I L K+GRV++A FE
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 452 EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG-CDQTVYTYTILINGMFKE 510
+M+++G + YN LI L C K + A L M D G C T++ + +I+ KE
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKE 489
Query: 511 HRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AF 569
R E+ KL+++M+ G+ P ++ L G CL+GK+ A K+L + G+ P T +
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Query: 570 EDMITCLCKTGRIKEACKL 588
+I CK R+++A L
Sbjct: 550 STLINGYCKISRMEDALVL 568
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 208/486 (42%), Gaps = 35/486 (7%)
Query: 134 FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFG 193
F R ++ Y L+D L G R +F+ + ++G ++ +L++ +
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347
Query: 194 GLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVV 253
G + E+ + M NGI P Y ++ L+ ++ + LVF M + P+ V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 254 TYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM 313
TY +I CK G+ + AM F M + P I Y +LI ++ L EM
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 314 DEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSM 373
++GI + + +N +I CK G+ IE +FE M+R G +PNV Y LI+ Y G M
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 374 NEAINI-----------------------------------FERMKYEGVEPDEVTYGVI 398
+EA+ + F+ M+ GV PD +TY +I
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 399 ISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGC 458
+ GL + R A + + +G + Y+ ++ GL K D+A ++F+ +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 459 PRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALK 518
++ +N++IDAL K G+ DEA LF G +TY ++ + + EE +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 519 LWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMITCLCK 578
L+ M D G T + + L G++ RA L + K E + + L
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 767
Query: 579 TGRIKE 584
G+ +E
Sbjct: 768 GGKYQE 773
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 197/461 (42%), Gaps = 77/461 (16%)
Query: 247 KVGPDVVTYNTMI-----------------------------------KGYCKVGKTQKA 271
+V PD+ TY +I KG C +T A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 272 ME-KFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM-DEKGIEIPSH------ 323
M+ R M P+ +Y L++ E L L H M D++G P
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 324 -------------------------------AYNLVIGGLCKVGKCIEGHAIFESMIRRG 352
YN +I LCK + + +M++ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 353 CQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAM 412
P+ Y +++ Y G EAI ++M+ +GVEPD VTY +++ LCKN R EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 413 QYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDAL 472
+ F+ G+ Y +L+ G G + E L + MV G D Y +++LI A
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 473 AKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTA 532
AK GK+D+A+ +F +M +G + TY +I + K R E+A+ ++ MID+G++P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 533 ASFRALSIGLCLSGKVARACKILDELAPKGIIPETA-FEDMITCLCKTGRIKEACKLADG 591
+ +L GLC K RA +++ E+ +GI T F +I CK GR+ E+ KL +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 592 IVDREREIPGKIR-TALINALRKAGNADLAIKLMHSKIGVG 631
+V R P I LIN AG D A+KL+ + VG
Sbjct: 502 MV-RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 11/255 (4%)
Query: 340 EGHAIFESMIRRGCQPNV-AIYTALIDSYAKLGSMNEAINIFERMKYEG---VEPDEVTY 395
+ +F+ ++RRG ++ + AL D S A++ + RM G V PD TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALAD--VARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 396 GVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL-FEEMV 454
G++I C+ RL+ G V+A+ ++ L+ GL R +A ++ M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 455 EKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDE---GCDQTVYTYTILINGMFKEH 511
E GC + + YN+L+ L + EAL L M D+ G V +YT +ING FKE
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 512 RNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFE 570
+++A + M+D+GI P ++ ++ LC + + +A ++L+ + G++P+ +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 571 DMITCLCKTGRIKEA 585
++ C +G+ KEA
Sbjct: 271 SILHGYCSSGQPKEA 285
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 207/419 (49%), Gaps = 1/419 (0%)
Query: 168 LVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL 227
+VF E E G V++ N +I LG ++E + M+ G P + +Y+ ++NG
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 228 VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
++ + +VM+ + P+ Y ++I C++ K +A E F M + + PD
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
+ Y TLI GD + ++EM + I Y +I G C++G +E +F
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M +G +P+ +T LI+ Y K G M +A + M G P+ VTY +I GLCK
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
L+ A + G+ N Y+S+++GL K+G ++EA +L E G D+ Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
L+DA K G++D+A + K M +G T+ T+ +L+NG E+ KL + M+ KG
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEA 585
I P A +F +L C+ + A I ++ +G+ P+ +E+++ CK +KEA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 186/402 (46%), Gaps = 2/402 (0%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
++K N Y S+I L + F+E+ +G L +LI F G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNT 257
+ M I P + TY +++G +E+ +L ++ G + PD VT+
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTE 426
Query: 258 MIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKG 317
+I GYCK G + A M P+ +TY TLI EGD DS L HEM + G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 318 IEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAI 377
++ YN ++ GLCK G E + G + YT L+D+Y K G M++A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 378 NIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGL 437
I + M +G++P VT+ V+++G C + LE+ + + A G+A NA ++SL+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 438 GKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTV 497
+ A ++++M +G D Y L+ K + EA LF+ M+ +G +V
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 498 YTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALS 539
TY++LI G K + EA +++D M +G+ F S
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 37/393 (9%)
Query: 195 LGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSEL-VFKVMENGKVGPDVV 253
G++ E V+ M G+ S+ + N + L + ++ + VF+ V +V
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 254 TYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM 313
+YN +I C++G+ ++A ME + PD I+Y T
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST--------------------- 286
Query: 314 DEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSM 373
V+ G C+ G+ + + E M R+G +PN IY ++I ++ +
Sbjct: 287 --------------VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 374 NEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSL 433
EA F M +G+ PD V Y +I G CK + A ++F + + + + Y+++
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 434 IDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGC 493
I G + G + EA +LF EM KG DS + LI+ K G + +A + M GC
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 494 DQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACK 553
V TYT LI+G+ KE + A +L M G+ P ++ ++ GLC SG + A K
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 554 ILDELAPKGIIPET-AFEDMITCLCKTGRIKEA 585
++ E G+ +T + ++ CK+G + +A
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%)
Query: 134 FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFG 193
F + + + ++ Y ++I GD+ +F+E+ KG LI +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 194 GLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVV 253
G +++ V M + G P++ TY L++GL ++S+ + M + P++
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 254 TYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM 313
TYN+++ G CK G ++A++ EA + D +TY TL+ A G+ D + EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 314 DEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSM 373
KG++ +N+++ G C G +G + M+ +G PN + +L+ Y ++
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 374 NEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSL 433
A I++ M GV PD TY ++ G CK ++EA F+ + G +V+ YS L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 434 IDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLD 479
I G K + EA E+F++M +G D ++ D K + D
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 156/337 (46%), Gaps = 38/337 (11%)
Query: 289 TYMT-LIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
Y+T L + CY + + ++ E E G+ +YN+VI +C++G+ E H +
Sbjct: 215 VYLTRLSKDCYKTA---TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M +G P+V Y+ +++ Y + G +++ + E MK +G++P+ YG II LC+ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
L EA + F G+ + + Y++LIDG K G + A + F EM + D Y
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
+I + G + EA LF M +G + T+T LING K ++A ++ + MI G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMITCLCKTGRIKEACK 587
+P ++ L GLC G + A ++L E+ G+ P
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF------------------- 492
Query: 588 LADGIVDREREIPGKIRTALINALRKAGNADLAIKLM 624
+++N L K+GN + A+KL+
Sbjct: 493 ---------------TYNSIVNGLCKSGNIEEAVKLV 514
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 26/378 (6%)
Query: 98 LDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNV--------GLRLFTWAARQKKYSHNLEC 149
+D FC++ I+ + F + + + D++ P+V G K H + C
Sbjct: 358 IDGFCKRGDIRAASKFF-YEMHSRDIT--PDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 150 ---------YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSF---GGLGM 197
+ LI+ G + V N + + G V +LI G L
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 198 VEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNT 257
ELL M + G++P+++TYN ++NGL S IE + + E + D VTY T
Sbjct: 475 ANELL---HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 258 MIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKG 317
++ YCK G+ KA E + M + +QP +T+ L+ L G + L + M KG
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 318 IEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAI 377
I + +N ++ C AI++ M RG P+ Y L+ + K +M EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 378 NIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGL 437
+F+ MK +G TY V+I G K ++ EA + F+ R G+A + + D
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 438 GKAGRVDEAEELFEEMVE 455
K R D + +E++E
Sbjct: 712 YKGKRPDTIVDPIDEIIE 729
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 8/284 (2%)
Query: 352 GCQPNV--AIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKN-ERL 408
G P V + L+D G + EA +FE+M G+ + V ++ L K+ +
Sbjct: 172 GSDPRVFDVFFQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 409 EEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVL 468
A+ F GV N Y+ +I + + GR+ EA L M KG D Y+ +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 469 IDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGI 528
++ + G+LD+ L + M+ +G Y Y +I + + + EA + + MI +GI
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 529 TPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACK 587
P + L G C G + A K E+ + I P+ + +I+ C+ G + EA K
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 588 LADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
L + + E T LIN KAG+ A ++ + I G
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 217/414 (52%), Gaps = 14/414 (3%)
Query: 240 FKVMEN----GKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
FK +EN G V PD++ T+I+G+C++GKT+KA + +E PD ITY +I
Sbjct: 122 FKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
G+ ++ LS+ +D + YN ++ LC GK + + + M++R C P
Sbjct: 181 GYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
+V YT LI++ + + A+ + + M+ G PD VTY V+++G+CK RL+EA+++
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
++G N + ++ ++ + GR +AE+L +M+ KG +N+LI+ L +
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 476 GKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 535
G L A+ + ++M GC +Y L++G KE + + A++ + M+ +G P ++
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 536 RALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGIVD 594
+ LC GKV A +IL++L+ KG P + +I L K G+ +A KL D +
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 595 REREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKRRVKFRSLV 648
++ + ++L+ L + G D AIK H ++RMG V F S++
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-----FERMGIRPNAVTFNSIM 526
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 215/481 (44%), Gaps = 33/481 (6%)
Query: 178 FLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSE 237
F + +N+ ++ G +EE +M +G P + L+ G +
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 238 LVFKVMENGKVGPDVVTYNTMIKGYCKV-------------------------------- 265
+ +++E PDV+TYN MI GYCK
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS 217
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
GK ++AME M R+ PD ITY LI+A + + L EM ++G Y
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKY 385
N+++ G+CK G+ E M GCQPNV + ++ S G +A + M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
+G P VT+ ++I+ LC+ L A+ E +G N++ Y+ L+ G K ++D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 446 AEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
A E E MV +GC D YN ++ AL K GK+++A+ + ++ +GC + TY +I+
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 506 GMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIP 565
G+ K + +A+KL D M K + P ++ +L GL GKV A K E GI P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 566 E-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLM 624
F ++ LCK+ + A +++R + T LI L G A A++L+
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 625 H 625
+
Sbjct: 578 N 578
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%)
Query: 182 VSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFK 241
V N++++S G +++ + V M + P + TY L+ + + +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 242 VMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEG 301
M + PDVVTYN ++ G CK G+ +A++ M + QP+ IT+ ++++ G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 302 DFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYT 361
+ L +M KG +N++I LC+ G I E M + GCQPN Y
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 362 ALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRAN 421
L+ + K M+ AI ERM G PD VTY +++ LCK+ ++E+A++ +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 422 GVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEA 481
G + + Y+++IDGL KAG+ +A +L +EM K D+ Y+ L+ L++ GK+DEA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 482 LALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIG 541
+ F E G T+ ++ G+ K + + A+ MI++G P S+ L G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 542 LCLSGKVARACKILDELAPKGIIPETAFEDM 572
L G A ++L+EL KG++ +++ E +
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 185/408 (45%), Gaps = 4/408 (0%)
Query: 64 DVSDLVSCPQNLNPSPWV---RQILNLLDGSSDMEANLDSFCRKFLIKLSPNFVSFVLRN 120
++++ +S ++ SP V IL L S ++ ++ R P+ +++ +
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 121 HDVSKRPNVGLRL-FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFL 179
+ VG + R + + ++ Y L++ + G +D N++ G
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 180 MTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELV 239
V N +++S G + + M G PS+ T+N L+N L + + +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 240 FKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYL 299
+ M P+ ++YN ++ G+CK K +A+E M +R PD +TY T++ A
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 300 EGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAI 359
+G + + + +++ KG YN VI GL K GK + + + M + +P+
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 360 YTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCR 419
Y++L+ ++ G ++EAI F + G+ P+ VT+ I+ GLCK+ + + A+ + F
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 420 ANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
G N Y+ LI+GL G EA EL E+ KG + S V
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 221/461 (47%), Gaps = 37/461 (8%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
SHNL Y LI+C + V ++ + G+ + NSL+ F + + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLV-NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G +P +T+N L++GL ++ E+ LV +++ G PD+VTY ++ G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGL 231
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK G A+ + ME ++P + Y T+I A + + L+L+ EMD KGI
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
YN +I LC G+ + + MI R PNV ++ALID++ K G + EA +++
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M ++PD TY +I+G C ++RL+EA FE + N + Y++LI G KA R
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 443 VDEAEELFEEMVEKG--------------------CPR---------------DSYCYNV 467
VDE ELF EM ++G C D Y++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
L+D L GK++ AL +F+ ++ + +YTY I+I GM K + E+ L+ + KG
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA 568
+ P ++ + G C G A + E+ +G +P++
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 206/441 (46%), Gaps = 3/441 (0%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
+ L+ +A D V + +++ G + + LI F + L V M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFI-ESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
+ G EP + T N L+NG + I ++ LV +++E G PD T+NT+I G + +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRA 202
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
+A+ M + QPD +TY ++ GD D LSL +M++ IE YN +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGV 388
I LC + +F M +G +PNV Y +LI G ++A + M +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 389 EPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEE 448
P+ VT+ +I K +L EA + ++ + + YSSLI+G R+DEA+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 449 LFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMF 508
+FE M+ K C + YN LI K ++DE + LF+ M G TYT LI+G F
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 509 KEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET- 567
+ + A ++ M+ G+ P ++ L GLC +GKV A + + L + P+
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 568 AFEDMITCLCKTGRIKEACKL 588
+ MI +CK G++++ L
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDL 523
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 194/390 (49%)
Query: 196 GMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTY 255
G ++ L + + M++ IEP + YN +++ L N + + +F M+N + P+VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
N++I+ C G+ A M R + P+ +T+ LI A EG LY EM +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
+ I+ Y+ +I G C + E +FE MI + C PNV Y LI + K ++E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
+ +F M G+ + VTY +I G + + A F+ ++GV + M YS L+D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
GL G+V+ A +FE + D Y YN++I+ + K GK+++ LF + +G
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
V TYT +++G ++ EEA L+ M ++G P + ++ L G A + +++
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 556 DELAPKGIIPETAFEDMITCLCKTGRIKEA 585
E+ + + + ++T + GR+ ++
Sbjct: 595 REMRSCRFVGDASTIGLVTNMLHDGRLDKS 624
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 1/379 (0%)
Query: 111 PNFVSFVLRNHDVSKRPNVGLRL-FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLV 169
P+ V++ + + + KR ++ L L Q K + Y ++ID L +V+ +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 170 FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVN 229
F E+ KG V NSLI+ G + + M E I P++ T++ L++ V
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 230 SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKIT 289
+ +E ++ M + PD+ TY+++I G+C + +A F M +++ P+ +T
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 290 YMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMI 349
Y TLI+ D + L+ EM ++G+ + Y +I G + +C +F+ M+
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 350 RRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLE 409
G P++ Y+ L+D G + A+ +FE ++ +EPD TY ++I G+CK ++E
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 410 EAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLI 469
+ F GV N + Y++++ G + G +EA+ LF EM E+G DS YN LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 470 DALAKCGKLDEALALFKRM 488
A + G + L + M
Sbjct: 579 RAHLRDGDKAASAELIREM 597
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 186/366 (50%), Gaps = 2/366 (0%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
+L Y +++ L GD+D + ++++ V N++I + V + L ++
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 206 RSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCK 264
M GI P++ TYN L+ L N + ++S L+ ++E K+ P+VVT++ +I + K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVK 338
Query: 265 VGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
GK +A + + M R++ PD TY +LI + D ++ M K
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMK 384
YN +I G CK + EG +F M +RG N YT LI + + + A +F++M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 385 YEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVD 444
+GV PD +TY +++ GLC N ++E A+ FE+ + + + + Y+ +I+G+ KAG+V+
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 445 EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILI 504
+ +LF + KG + Y ++ + G +EA ALF+ M++EG TY LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 505 NGMFKE 510
++
Sbjct: 579 RAHLRD 584
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 182/413 (44%), Gaps = 4/413 (0%)
Query: 218 YTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRA 277
Y Y + +N + ++ + +F M + P +V ++ ++ K+ K +
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 278 MEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGK 337
M+ + + TY LI L++ +M + G E N ++ G C +
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 338 CIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGV 397
+ ++ M+ G QP+ + LI + +EA+ + +RM +G +PD VTYG+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 398 IISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKG 457
+++GLCK ++ A+ + + + Y+++ID L V++A LF EM KG
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 458 CPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEAL 517
+ YN LI L G+ +A L M + + V T++ LI+ KE + EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 518 KLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCL 576
KL+D MI + I P ++ +L G C+ ++ A + + + K P + +I
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 577 CKTGRIKEACKLADGIVDREREIPGKIRTALINAL---RKAGNADLAIKLMHS 626
CK R+ E +L + R T LI+ R+ NA + K M S
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 43/343 (12%)
Query: 108 KLSPNFVSF-VLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRV 166
K++PN V+F L + V + V ++ ++ Y SLI+ + +D
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 167 RLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNG 226
+ +F + K V N+LIK F V+E + ++R M + G+ + TY L++G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 227 LVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPD 286
+ +++++VFK M + V PD++TY+ ++ G C GK + A+ F ++ ++PD
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 287 KITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFE 346
TY N++I G+CK GK +G +F
Sbjct: 501 IYTY-----------------------------------NIMIEGMCKAGKVEDGWDLFC 525
Query: 347 SMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKN- 405
S+ +G +PNV YT ++ + + G EA +F MK EG PD TY +I ++
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 406 --ERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEA 446
E ++ CR G A L+ + GR+D++
Sbjct: 586 DKAASAELIREMRSCRFVGDASTI----GLVTNMLHDGRLDKS 624
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 198/383 (51%)
Query: 186 NSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMEN 245
N+LI E + + M G +P L+TY ++NGL I+ + + K ME
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 246 GKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDS 305
GK+ DVV Y T+I C A+ F M+ + ++P+ +TY +LI+ G +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 306 CLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALID 365
L +M E+ I ++ +I K GK +E +++ MI+R P++ Y++LI+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 366 SYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV 425
+ ++EA ++FE M + P+ VTY +I G CK +R+EE M+ F G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 426 NAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF 485
N + Y++LI GL +AG D A+++F++MV G P D Y++L+D L K GKL++AL +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 486 KRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
+ ++ + +YTY I+I GM K + E+ L+ + KG+ P + + G C
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 546 GKVARACKILDELAPKGIIPETA 568
G A + E+ G +P +
Sbjct: 549 GLKEEADALFREMKEDGTLPNSG 571
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 160/576 (27%), Positives = 252/576 (43%), Gaps = 84/576 (14%)
Query: 127 PNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAAN 186
P LR ++A Y L + L+D L L VD +F E+ + L ++ N
Sbjct: 31 PLFSLRGVYFSAASYDYREKLSRNV-LLD-LKLDDAVD----LFGEMVQSRPLPSIVEFN 84
Query: 187 SLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMN---------------GLVNSM 231
L+ + + + ++ + M+ I LY+YN L+N G + +
Sbjct: 85 KLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 144
Query: 232 FIESSELVFKVMENG--------------------KVGPDVVTYNTMIKGYCKVGKTQKA 271
E + + NG + P+ VT+NT+I G K +A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSL---------------------- 309
+ M AR QPD TY T++ GD D LSL
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 310 -------------YHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPN 356
+ EMD KGI YN +I LC G+ + + MI R PN
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 357 VAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFE 416
V ++ALID++ K G + EA +++ M ++PD TY +I+G C ++RL+EA FE
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 417 FCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCG 476
+ N + Y++LI G KA RV+E ELF EM ++G ++ YN LI L + G
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 477 KLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFR 536
D A +FK+M +G + TY+IL++G+ K + E+AL +++ + + P ++
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 537 ALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKL-----AD 590
+ G+C +GKV + L+ KG+ P + MI+ C+ G +EA L D
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 591 GIVDREREIPGKIRTALINALRKAGNADLAIKLMHS 626
G + IR L + KA +A+L IK M S
Sbjct: 565 GTLPNSGTYNTLIRARLRDG-DKAASAEL-IKEMRS 598
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 213/444 (47%)
Query: 142 KYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEEL 201
+Y N + +LI L L + + + +G + +++ G ++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 202 LWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKG 261
L + + M++ IE + Y +++ L N + + +F M+N + P+VVTYN++I+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 262 YCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIP 321
C G+ A M R + P+ +T+ LI A EG LY EM ++ I+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 322 SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFE 381
Y+ +I G C + E +FE MI + C PNV Y LI + K + E + +F
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 382 RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAG 441
M G+ + VTY +I GL + + A + F+ ++GV + + YS L+DGL K G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 442 RVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYT 501
++++A +FE + + D Y YN++I+ + K GK+++ LF + +G V YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPK 561
+I+G ++ EEA L+ M + G P + ++ L G A + +++ E+
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 562 GIIPETAFEDMITCLCKTGRIKEA 585
G + + + M+ + GR++++
Sbjct: 600 GFVGDASTISMVINMLHDGRLEKS 623
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 201/461 (43%), Gaps = 14/461 (3%)
Query: 177 GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNF---LMNGLVNSMFI 233
G + + S SL K F L L + G+ S +Y++ L ++ + +
Sbjct: 8 GIVASQSKKMSLAKRFAQLRKASPLFSL------RGVYFSAASYDYREKLSRNVLLDLKL 61
Query: 234 ESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTL 293
+ + +F M + P +V +N ++ K+ K + M+ + D +Y L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 294 IQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGC 353
I L++ +M + G E + ++ G C + E A+ + M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 354 QPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQ 413
QPN + LI +EA+ + +RM G +PD TYG +++GLCK ++ A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 414 YFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALA 473
+ + + + Y+++ID L V++A LF EM KG + YN LI L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 474 KCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAA 533
G+ +A L M + + V T++ LI+ KE + EA KL+D MI + I P
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 534 SFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGI 592
++ +L G C+ ++ A + + + K P + +I CK R++E +L +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 593 VDREREIPGKIRT--ALINALRKAGNADLAIKLMHSKIGVG 631
+R + G T LI L +AG+ D+A K+ + G
Sbjct: 422 --SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 1/307 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
++K + N+ + +LID G + +++E+ ++ + +SLI F ++
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
E ++ M P++ TYN L+ G + +E +F+ M + + VTYNT+I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIE 319
+G + G A + F+ M + V PD ITY L+ G + L ++ + + +E
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 320 IPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
+ YN++I G+CK GK +G +F S+ +G +PNV IYT +I + + G EA +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
F MK +G P+ TY +I ++ + + + R+ G +A S +I+ L
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 616
Query: 440 AGRVDEA 446
GR++++
Sbjct: 617 DGRLEKS 623
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 111 PNFVSFVLRNHDVSKRPNVGLRLFTWAARQK-KYSHNLECYISLIDCLALCGDVDRVRLV 169
P+ +++ + + K + L + QK K ++ Y +I+ + G V+ +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 170 FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNG-LV 228
F L KG V ++I F G+ EE ++R MKE+G P+ TYN L+ L
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 229 NSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
+ S+EL+ ++ G VG D T + +I
Sbjct: 583 DGDKAASAELIKEMRSCGFVG-DASTISMVI 612
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 235/483 (48%), Gaps = 1/483 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
++K ++ + LI+ L G ++ + ++++ G+ T+ N+++ + G +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
+ + MK G++ + TYN L++ L S I L+ + M + P+ VTYNT+I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIE 319
G+ GK A + M + + P+ +T+ LI EG+F L +++ M+ KG+
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 320 IPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
+Y +++ GLCK + + M R G YT +ID K G ++EA+ +
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
M +G++PD VTY +I+G CK R + A + G++ N + YS+LI +
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 440 AGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYT 499
G + EA ++E M+ +G RD + +NVL+ +L K GK+ EA + M +G +
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 500 YTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDEL- 558
+ LING +A ++D M G PT ++ +L GLC G + A K L L
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 559 APKGIIPETAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNAD 618
A + + ++T +CK+G + +A L +V R T+LI+ L + G
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 619 LAI 621
+AI
Sbjct: 666 IAI 668
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 223/512 (43%), Gaps = 71/512 (13%)
Query: 183 SAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKV 242
S + LI+ + GM+++ L ++R M G PS+YT N ++ +V S S K
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 243 MENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGD 302
M K+ PDV T+N +I C G +K+ + ME P +TY T++ +G
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 303 FDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRR----------- 351
F + + L M KG++ YN++I LC+ + +G+ + M +R
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 352 ------------------------GCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEG 387
G PN + ALID + G+ EA+ +F M+ +G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 388 VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
+ P EV+YGV++ GLCKN + A ++ + NGV V + Y+ +IDGL K G +DEA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 448 ELFEEMVEKGCPRDSYCYNVLIDALAKCGK------------------------------ 477
L EM + G D Y+ LI+ K G+
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 478 -----LDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTA 532
L EA+ +++ M EG + +T+ +L+ + K + EA + M GI P
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 533 ASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADG 591
SF L G SG+ +A + DE+ G P + ++ LCK G ++EA K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 592 IVDREREIPGKIRTALINALRKAGNADLAIKL 623
+ + + L+ A+ K+GN A+ L
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 209/466 (44%), Gaps = 43/466 (9%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
+ + +K KG V N LI + + + R M++ I P+ TYN L+NG
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 229 N-SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPD- 286
N + +S+L+ +++ G + P+ VT+N +I G+ G ++A++ F MEA+ + P
Sbjct: 310 NEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Query: 287 ----------------------------------KITYMTLIQACYLEGDFDSCLSLYHE 312
+ITY +I G D + L +E
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 313 MDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGS 372
M + GI+ Y+ +I G CKVG+ I + R G PN IY+ LI + ++G
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 373 MNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSS 432
+ EAI I+E M EG D T+ V+++ LCK ++ EA ++ ++G+ N + +
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 433 LIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG 492
LI+G G +G +A +F+EM + G + Y L+ L K G L EA K +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 493 CDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARAC 552
Y L+ M K +A+ L+ M+ + I P + ++ +L GLC GK A
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 553 KILDELAPKG-IIPETAFEDMITCLCKTGRIKEACKLADGIVDRER 597
E +G ++P M TC G K A + GI RE+
Sbjct: 669 LFAKEAEARGNVLPNKV---MYTCFVD-GMFK-AGQWKAGIYFREQ 709
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 197/478 (41%), Gaps = 37/478 (7%)
Query: 121 HDVSKRPNVGLRLFTWAARQKKYSH-NLECYISLIDCLALCGDVDRVRLVFNELKEKGFL 179
HD+ + + +K+ H N Y +LI+ + G V + NE+ G
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 180 MTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELV 239
N+LI G +E L ++ M+ G+ PS +Y L++GL + + +
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 240 FKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKIT---------- 289
+ M+ V +TY MI G CK G +A+ M + PD +T
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450
Query: 290 -------------------------YMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
Y TLI C G + +Y M +G
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMK 384
+N+++ LCK GK E M G PN + LI+ Y G +A ++F+ M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 385 YEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVD 444
G P TYG ++ GLCK L EA ++ + A AV+ + Y++L+ + K+G +
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 445 EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG-CDQTVYTYTIL 503
+A LF EMV++ DSY Y LI L + GK A+ K E G YT
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 504 INGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPK 561
++GMFK + + + + M + G TP + A+ G GK+ + +L E+ +
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 195/427 (45%), Gaps = 4/427 (0%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLG-MVEELLWVWRSM 208
Y +L+ + G++ + +F E+ ++ L SLI G V +L+ +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 209 KENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
+ P+ Y ++G+ + ++ + M+N PD+VT N MI GY ++GK
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
+K + M +N P+ TY L+ D + LY + GI + +
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGV 388
+ G+C+ G I ++ I RG + + + LI G +N A ++ + M G+
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 389 EPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEE 448
D+ T ++S L +N R +E+ G++ + Y LI+GL + G + A
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 449 LFEEMV-EKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGM 507
+ EEM+ K CP + + ++ ALAKCGK DEA L + M T+ ++T L++
Sbjct: 916 VKEEMIAHKICPPN-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974
Query: 508 FKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE- 566
K EAL+L +M + G+ S+ L GLC G +A A ++ +E+ G +
Sbjct: 975 CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034
Query: 567 TAFEDMI 573
T ++ +I
Sbjct: 1035 TTYKALI 1041
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 199/466 (42%), Gaps = 2/466 (0%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
VF+E+ + G T SL+K G + E +S+ YN L+ +
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 229 NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEAR-NVQPDK 287
S + + +F M + PD TY ++I G C+ GKT A+ + EAR NV P+K
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
+ Y + + G + + + +MD G N +I G ++GK + + +
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 744
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M + PN+ Y L+ Y+K ++ + ++ + G+ PD++T ++ G+C++
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
LE ++ + GV V+ ++ LI G ++ A +L + M G D +
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
++ L + + E+ + M +G Y LING+ + + A + + MI
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA-FEDMITCLCKTGRIKEAC 586
I P + A+ L GK A +L + ++P A F ++ CK G + EA
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 587 KLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGY 632
+L + + ++ LI L G+ LA +L G G+
Sbjct: 985 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 141/327 (43%)
Query: 182 VSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFK 241
+ N++I + +G +E+ + M P+L TYN L++G + +S L+++
Sbjct: 719 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778
Query: 242 VMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEG 301
+ + PD +T ++++ G C+ + ++ +A R V+ D+ T+ LI C G
Sbjct: 779 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838
Query: 302 DFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYT 361
+ + L M GI + + ++ L + + E + M ++G P Y
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Query: 362 ALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRAN 421
LI+ ++G + A + E M + P V ++ L K + +EA F
Sbjct: 899 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958
Query: 422 GVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEA 481
+ +++L+ K G V EA EL M G D YNVLI L G + A
Sbjct: 959 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018
Query: 482 LALFKRMEDEGCDQTVYTYTILINGMF 508
L++ M+ +G TY LI G+
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGLL 1045
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 3/372 (0%)
Query: 202 LWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKG 261
++ M G P + T N +++G IE + + M N GP++ TYN ++ G
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 262 YCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIP 321
Y K + +R++ + PDK+T +L+ + L + +G+E+
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 322 SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFE 381
+ +N++I C G+ + + M G + A++ + E+ +
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 883
Query: 382 RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAG 441
M +G+ P+ Y +I+GLC+ ++ A E A+ + + S+++ L K G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 442 RVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYT 501
+ DEA L M++ + L+ K G + EAL L M + G + +Y
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVA--RACKILDELA 559
+LI G+ + A +L++ M G A +++AL GL L+ + A A IL +L
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL-LARETAFSGADIILKDLL 1062
Query: 560 PKGIIPETAFED 571
+G I +
Sbjct: 1063 ARGFITSMSLSQ 1074
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 11/318 (3%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
NL Y L+ + DV L++ + G L +SL+ M+E L +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 206 RSMKENGIEPSLYTYNFLM-----NGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIK 260
++ G+E YT+N L+ NG +N F +LV KVM + + D T + M+
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAF----DLV-KVMTSLGISLDKDTCDAMVS 867
Query: 261 GYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEI 320
+ + Q++ M + + P+ Y+ LI GD + + EM I
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 321 PSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIF 380
P+ A + ++ L K GK E + M++ P +A +T L+ K G++ EA+ +
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987
Query: 381 ERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDG-LGK 439
M G++ D V+Y V+I+GLC + A + +E + +G NA Y +LI G L +
Sbjct: 988 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047
Query: 440 AGRVDEAEELFEEMVEKG 457
A+ + ++++ +G
Sbjct: 1048 ETAFSGADIILKDLLARG 1065
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 351 RGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEE 410
R C N ++Y LI Y + G + +++ IF M G P T I+ + K+
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 411 AMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLID 470
+ + + + ++ LI+ L G +++ L ++M + G YN ++
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 471 ALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITP 530
K G+ A+ L M+ +G D V TY +LI+ + + +R + L M + I P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 531 TAASFRALSIGLCLSGKVARACKILDELAPKGIIP-ETAFEDMITCLCKTGRIKEACKL 588
++ L G GKV A ++L+E+ G+ P F +I G KEA K+
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 220/466 (47%), Gaps = 2/466 (0%)
Query: 176 KGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIES 235
KG+ V LIK F L + + + V +++ G +P ++ YN L+NG I+
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDD 176
Query: 236 SELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
+ V M + PD VTYN MI C GK A++ + + N QP ITY LI+
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
A LEG D L L EM +G++ YN +I G+CK G + ++ +GC+P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
+V Y L+ + G E + +M E +P+ VTY ++I+ LC++ ++EEAM
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
+ + G+ +A Y LI + GR+D A E E M+ GC D YN ++ L K
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 476 GKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASF 535
GK D+AL +F ++ + GC +Y + + ++ AL + M+ GI P ++
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 536 RALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMITC-LCKTGRIKEACKLADGIVD 594
++ LC G V A ++L ++ P +++ CK RI++A + + +V
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 595 REREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKR 640
T LI + AG A++L + + + S KR
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR 582
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 202/421 (47%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +LI+ +D V + ++ K F N +I S G ++ L V +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
+ +P++ TY L+ + ++ + + M + + PD+ TYNT+I+G CK G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
+A E R +E + +PD I+Y L++A +G ++ L +M + + Y+++I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
LC+ GK E + + M +G P+ Y LI ++ + G ++ AI E M +G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
PD V Y +++ LCKN + ++A++ F G + N+ Y+++ L +G A +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
EM+ G D YN +I L + G +DEA L M +V TY I++ G K
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 510 EHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAF 569
HR E+A+ + + M+ G P ++ L G+ +G A A ++ ++L I E +F
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSF 580
Query: 570 E 570
+
Sbjct: 581 K 581
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 184/386 (47%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
R K +S + Y +I L G +D V N+L TV LI++ G V
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
+E L + M G++P ++TYN ++ G+ ++ + + + +E PDV++YN +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
++ GK ++ + M + P+ +TY LI +G + ++L M EKG+
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
+++Y+ +I C+ G+ E+MI GC P++ Y ++ + K G ++A+
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
IF ++ G P+ +Y + S L + A+ +NG+ + + Y+S+I L
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY 498
+ G VDEA EL +M YN+++ K ++++A+ + + M GC
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 499 TYTILINGMFKEHRNEEALKLWDMMI 524
TYT+LI G+ EA++L + ++
Sbjct: 545 TYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 37/327 (11%)
Query: 333 CKVGKCIEGHAIFESMIRRG-------C---------------------------QPNVA 358
C+ G IE + E+M+R+G C QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 359 IYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFC 418
Y ALI+ + K+ +++A + +RM+ + PD VTY ++I LC +L+ A++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 419 RANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKL 478
++ + Y+ LI+ G VDEA +L +EM+ +G D + YN +I + K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 479 DEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRAL 538
D A + + +E +GC+ V +Y IL+ + + + EE KL M + P ++ L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 539 SIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRER 597
LC GK+ A +L + KG+ P+ +++ +I C+ GR+ A + + ++ +
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS-DG 398
Query: 598 EIPGKIR-TALINALRKAGNADLAIKL 623
+P + ++ L K G AD A+++
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEI 425
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 223/447 (49%), Gaps = 3/447 (0%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
SHNL Y LI+C + + ++ + G+ ++ +SL+ + + + +
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 204 VWRSMKENGIEPSLYTYNFLMNGL-VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G P T+ L++GL +++ E+ LV ++++ G P++VTY ++ G
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGL 160
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK G A MEA ++ D + + T+I + D L+L+ EM+ KGI
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Y+ +I LC G+ + + MI + PN+ + ALID++ K G EA + +
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M ++PD TY +I+G C ++RL++A Q FEF + + Y++LI G K+ R
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
V++ ELF EM +G D+ Y LI L G D A +FK+M +G + TY+I
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
L++G+ + E+AL+++D M I + + G+C +GKV + L+ KG
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 563 IIPE-TAFEDMITCLCKTGRIKEACKL 588
+ P + MI+ LC ++EA L
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYAL 487
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 202/405 (49%), Gaps = 1/405 (0%)
Query: 164 DRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFL 223
D V LV +++ E G+ +LI E + + M + G +P+L TY +
Sbjct: 98 DAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 224 MNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV 283
+NGL I+ + + ME K+ DVV +NT+I CK A+ F+ ME + +
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 284 QPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343
+P+ +TY +LI G + L +M EK I +N +I K GK +E
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 344 IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLC 403
+ + MI+R P++ Y +LI+ + +++A +FE M + PD TY +I G C
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 404 KNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSY 463
K++R+E+ + F G+ + + Y++LI GL G D A+++F++MV G P D
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 464 CYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMM 523
Y++L+D L GKL++AL +F M+ +Y YT +I GM K + ++ L+ +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 524 IDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA 568
KG+ P ++ + GLC + A +L ++ G +P++
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 214/435 (49%), Gaps = 3/435 (0%)
Query: 186 NSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIE-SSELVFKVME 244
N L+ + + + ++ + M+ GI +LYTYN L+N I + L+ K+M+
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 245 NGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFD 304
G P +VT ++++ GYC + A+ M +PD IT+ TLI +L
Sbjct: 74 LG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 305 SCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALI 364
++L M ++G + Y +V+ GLCK G + M + +V I+ +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 365 DSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVA 424
DS K +++A+N+F+ M+ +G+ P+ VTY +IS LC R +A Q +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 425 VNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALAL 484
N + +++LID K G+ EAE+L ++M+++ D + YN LI+ +LD+A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 485 FKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCL 544
F+ M + C + TY LI G K R E+ +L+ M +G+ ++ L GL
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 545 SGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKI 603
G A K+ ++ G+ P+ + ++ LC G++++A ++ D + E ++ I
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 604 RTALINALRKAGNAD 618
T +I + KAG D
Sbjct: 433 YTTMIEGMCKAGKVD 447
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 194/372 (52%), Gaps = 2/372 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
Q+ NL Y +++ L GD+D + N+++ V N++I S V+
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ L +++ M+ GI P++ TY+ L++ L + + ++S+L+ ++E K+ P++VT+N +
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNAL 261
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I + K GK +A + M R++ PD TY +LI + D ++ M K
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
YN +I G CK + +G +F M RG + YT LI G + A
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
+F++M +GV PD +TY +++ GLC N +LE+A++ F++ + + + ++ Y+++I+G+
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY 498
KAG+VD+ +LF + KG + YN +I L L EA AL K+M+++G
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 499 TYTILINGMFKE 510
TY LI ++
Sbjct: 502 TYNTLIRAHLRD 513
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 189/390 (48%)
Query: 196 GMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTY 255
G ++ + M+ IE + +N +++ L ++ + +FK ME + P+VVTY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
+++I C G+ A + M + + P+ +T+ LI A EG F L+ +M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
+ I+ YN +I G C + + +FE M+ + C P++ Y LI + K + +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
+F M + G+ D VTY +I GL + + A + F+ ++GV + M YS L+D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
GL G++++A E+F+ M + D Y Y +I+ + K GK+D+ LF + +G
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
V TY +I+G+ + +EA L M + G P + ++ L G A + +++
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Query: 556 DELAPKGIIPETAFEDMITCLCKTGRIKEA 585
E+ + + + ++ + GR+ ++
Sbjct: 524 REMRSCRFVGDASTIGLVANMLHDGRLDKS 553
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 161/308 (52%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
N+ Y SLI CL G + +++ EK + N+LI +F G E +
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKV 265
M + I+P ++TYN L+NG ++ ++ +F+ M + PD+ TYNT+IKG+CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
+ + E FR M R + D +TY TLIQ + +GD D+ ++ +M G+ Y
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKY 385
++++ GLC GK + +F+ M + + ++ IYT +I+ K G +++ ++F +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
+GV+P+ VTY +ISGLC L+EA + + +G ++ Y++LI + G
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 446 AEELFEEM 453
+ EL EM
Sbjct: 519 SAELIREM 526
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 1/380 (0%)
Query: 110 SPNFVSFVLRNHDVSKRPNVGLRL-FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRL 168
PN V++ + + + KR ++ L K ++ + ++ID L VD
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
+F E++ KG V +SLI G + + M E I P+L T+N L++ V
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 229 NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKI 288
+E + M + PD+ TYN++I G+C + KA + F M +++ PD
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 289 TYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESM 348
TY TLI+ + L+ EM +G+ + Y +I GL G C +F+ M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 349 IRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERL 408
+ G P++ Y+ L+D G + +A+ +F+ M+ ++ D Y +I G+CK ++
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 409 EEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVL 468
++ F GV N + Y+++I GL + EA L ++M E G DS YN L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 469 IDALAKCGKLDEALALFKRM 488
I A + G + L + M
Sbjct: 507 IRAHLRDGDKAASAELIREM 526
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M++ P++ + L+ + AK+ + I++ E+M+ G+ + TY ++I+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
+ A+ G + + SSL++G R+ +A L ++MVE G D+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
LI L K EA+AL RM GC + TY +++NG+ K + A L + M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEAC 586
I F + LC V A + E+ KGI P + +I+CLC GR +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 587 KLADGIVDREREIPGKIRTALINALRKAG 615
+L +++++ ALI+A K G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEG 269
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 222/459 (48%), Gaps = 42/459 (9%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELK-EKGFLMT--VSAANSLIKSFGGLGMVEELL---- 202
Y SLID GD+ LV L+ GF+ + + NSL F + M++E+
Sbjct: 94 YNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG 153
Query: 203 ---------------WV---------------WRSMKENGIEPSLYTYNFLMNGLVNSMF 232
W+ + SMK + + P++ T+ L++G +
Sbjct: 154 VMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGD 213
Query: 233 IESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMT 292
+E + ++K M ++ +VVTY +I G+CK G+ Q+A E + M V+P+ + Y T
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 293 LIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRG 352
+I + GD D+ + +M +G+ + AY ++I GLC GK E I E M +
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 353 CQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAM 412
P++ I+T ++++Y K G M A+N++ ++ G EPD V +I G+ KN +L EA+
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Query: 413 QYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDAL 472
YF +AN V Y+ LID L K G E E LF ++ E G D + Y I L
Sbjct: 394 VYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 473 AKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTA 532
K G L +A L RM EG + YT LI G+ + EA +++D M++ GI+P +
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 533 ASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFED 571
A F L G +A A +L ++ +G++ + D
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDAD 547
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 230/492 (46%), Gaps = 47/492 (9%)
Query: 173 LKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMF 232
L +G+ S+ NS++ LG V+ + SM G EP + +YN L++G +
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 233 IESSELV------------------FKVMENGK-------------------VGPDVVTY 255
I S+ LV F + NG P+VVTY
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTY 166
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
+T I +CK G+ Q A++ F +M+ + P+ +T+ LI GD + +SLY EM
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
+ + Y +I G CK G+ ++ M+ +PN +YT +ID + + G +
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
A+ +M +G+ D YGVIISGLC N +L+EA + E + + + + ++++++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF--KRMEDEGC 493
K+GR+ A ++ +++E+G D + +ID +AK G+L EA+ F ++ D
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND--- 403
Query: 494 DQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACK 553
YT+LI+ + KE E +L+ + + G+ P + + GLC G + A K
Sbjct: 404 ----VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 554 ILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALR 612
+ + +G++ + A+ +I L G + EA ++ D +++ + LI A
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 613 KAGNADLAIKLM 624
K GN A L+
Sbjct: 520 KEGNMAAASDLL 531
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 183/386 (47%), Gaps = 10/386 (2%)
Query: 110 SPNFVSFVLRNHDVSKRPNVGLRLFTW-AARQKKYSHNLECYISLIDCLALCGDVDRVRL 168
SPN V++ K + L L ++ + ++ S N+ + LID GD++
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
++ E++ + V +LI F G ++ ++ M E+ +EP+ Y +++G
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 229 NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKI 288
+++ M N + D+ Y +I G C GK ++A E ME ++ PD +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 289 TYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESM 348
+ T++ A + G + +++YH++ E+G E A + +I G+ K G+ E F
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--- 396
Query: 349 IRRGC--QPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNE 406
C + N +YT LID+ K G E +F ++ G+ PD+ Y I+GLCK
Sbjct: 397 ----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 407 RLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYN 466
L +A + G+ ++ + Y++LI GL G + EA ++F+EM+ G DS ++
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512
Query: 467 VLIDALAKCGKLDEALALFKRMEDEG 492
+LI A K G + A L M+ G
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 15/319 (4%)
Query: 324 AYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERM 383
++N V+ +CK+G+ I SM R GC+P+V Y +LID + + G + A + E +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 384 KYEG---VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV-----NAMFYSSLID 435
+ +PD V++ + +G K + L+E Y GV + N + YS+ ID
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYM------GVMLKCCSPNVVTYSTWID 171
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
K+G + A + F M + + LID K G L+ A++L+K M
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
V TYT LI+G K+ + A +++ M++ + P + + + G G A K L
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 556 DELAPKGI-IPETAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKA 614
++ +G+ + TA+ +I+ LC G++KEA ++ + + + I T ++NA K+
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 615 GNADLAIKLMHSKIGVGYD 633
G A+ + H I G++
Sbjct: 352 GRMKAAVNMYHKLIERGFE 370
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 115/295 (38%), Gaps = 38/295 (12%)
Query: 375 EAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLI 434
EA+ R++ PD T I L + ++++ + + G + ++S++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 435 DGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFK-------- 486
+ K G+V AE++ M GC D YN LID + G + A + +
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 487 -------------------RMEDE----------GCDQTVYTYTILINGMFKEHRNEEAL 517
+M DE C V TY+ I+ K + AL
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 518 KLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDEL-APKGIIPETAFEDMITCL 576
K + M ++P +F L G C +G + A + E+ + + + +I
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 577 CKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
CK G ++ A ++ +V+ E + T +I+ + G++D A+K + + G
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 217/441 (49%), Gaps = 1/441 (0%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
+L+ Y SL+ L D+D V + E++ G V I+ G G + E +
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKV 265
+ M + G P + TY L++ L + ++ ++ VF+ M+ G+ PD VTY T++ +
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
+ + ME PD +T+ L+ A G+F M ++GI H Y
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKY 385
N +I GL +V + + +F +M G +P Y ID Y K G A+ FE+MK
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
+G+ P+ V + L K R EA Q F + G+ +++ Y+ ++ K G +DE
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 446 AEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
A +L EM+E GC D N LI+ L K ++DEA +F RM++ TV TY L+
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 506 GMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIP 565
G+ K + +EA++L++ M+ KG P +F L LC + +V A K+L ++ G +P
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 566 ET-AFEDMITCLCKTGRIKEA 585
+ + +I L K G++KEA
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEA 662
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 263/560 (46%), Gaps = 10/560 (1%)
Query: 40 LASFTSNPRSANSFPPPEW-VEPFNDVSDLVSCPQNLNPSPWVRQILNLLDGSSDMEANL 98
L+S R SFP + F V+ ++ ++ + L + DG + A +
Sbjct: 82 LSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRV-DGKLEEMAYV 140
Query: 99 DSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKK---YSHNLECYISLID 155
+K +IK N + ++ V GL+ +A R+ + + N Y LI
Sbjct: 141 FDLMQKRIIKRDTNTYLTIFKSLSVKG----GLKQAPYALRKMREFGFVLNAYSYNGLIH 196
Query: 156 CLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEP 215
L V+ + +GF ++ +SL+ G ++ ++ + + M+ G++P
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 216 SLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKF 275
++YT+ + L + I + + K M++ GPDVVTY +I C K A E F
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 276 RAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKV 335
M+ +PD++TY+TL+ D DS + EM++ G + +++ LCK
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 336 GKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTY 395
G E + M +G PN+ Y LI ++ +++A+ +F M+ GV+P TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 396 GVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVE 455
V I K+ A++ FE + G+A N + ++ + L KAGR EA+++F + +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 456 KGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEE 515
G DS YN+++ +K G++DEA+ L M + GC+ V LIN ++K R +E
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 516 ALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMIT 574
A K++ M + + PT ++ L GL +GK+ A ++ + + KG P T F +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 575 CLCKTGRIKEACKLADGIVD 594
CLCK + A K+ ++D
Sbjct: 617 CLCKNDEVTLALKMLFKMMD 636
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 181/332 (54%), Gaps = 2/332 (0%)
Query: 209 KENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
K+ G++P L TYN L+ GL+ + IE ++ VF +++ PDV TYN ++ Y K GK
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHE-MDEKGIEIPSHAYNL 327
+ E ++ M + + IT+ +I G+ D L LY++ M ++ + Y
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 328 VIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEG 387
+I GL K G+ E +FE M+ GC+PN AIY LI+ + K G + A +F+RM EG
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 388 VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
V PD TY V++ LC R++E + YF+ + +G+ + + Y+ +I+GLGK+ R++EA
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 448 ELFEEM-VEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
LF EM +G D Y YN LI L G ++EA ++ ++ G + V+T+ LI G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRAL 538
+ E A ++ M+ G +P ++ L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 213/446 (47%), Gaps = 3/446 (0%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y LID L +D + VF ++K +L+ F ++ + W M+
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
++G P + T+ L++ L + + VM + + P++ TYNT+I G +V +
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A+E F ME+ V+P TY+ I GD S L + +M KGI A N +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
L K G+ E IF + G P+ Y ++ Y+K+G ++EAI + M G E
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
PD + +I+ L K +R++EA + F + + + Y++L+ GLGK G++ EA EL
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
FE MV+KGCP ++ +N L D L K ++ AL + +M D GC V+TY +I G+ K
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 510 EHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDE-LAPKGIIPETA 568
+ +EA+ + M K + P + L G+ + + A KI+ L P
Sbjct: 656 NGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 569 F-EDMITCLCKTGRIKEACKLADGIV 593
F ED+I + I A ++ +V
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLV 740
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 228/547 (41%), Gaps = 116/547 (21%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
SLI+ L VD +F +KE TV N+L+ G G ++E + ++ M +
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 212 GIEPSLYTYNFLMN---------------------GLVNSMFIESSELVFKVMENGKVG- 249
G P+ T+N L + G V +F ++ ++F +++NG+V
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT-IIFGLVKNGQVKE 661
Query: 250 -------------PDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV-QPDKITYMTLIQ 295
PD VT T++ G K + A + QP + + LI
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG 721
Query: 296 ACYLEGDFDSCLSLYHEMDEKGI------------------------------------- 318
+ E D+ +S + GI
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 319 --EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEA 376
++P+ YNL+IGGL + +F + GC P+VA Y L+D+Y K G ++E
Sbjct: 782 QPKLPT--YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 377 INIFERMKYEGVE------------------------------------PDEVTYGVIIS 400
+++ M E P TYG +I
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 401 GLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPR 460
GL K+ RL EA Q FE G N Y+ LI+G GKAG D A LF+ MV++G
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 461 DSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLW 520
D Y+VL+D L G++DE L FK +++ G + V Y ++ING+ K HR EEAL L+
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 521 -DMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCK 578
+M +GITP ++ +L + L ++G V A KI +E+ G+ P F +I
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 579 TGRIKEA 585
+G+ + A
Sbjct: 1080 SGKPEHA 1086
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 220/513 (42%), Gaps = 72/513 (14%)
Query: 157 LALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPS 216
LA G + +F LK+ G + N ++K + +G ++E + + M ENG EP
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 217 LYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFR 276
+ N L+N L + ++ + +F M+ K+ P VVTYNT++ G K GK Q+A+E F
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 277 AMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVG 336
M + P+ IT+ TL + L + +M + G YN +I GL K G
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 337 KCIEGHAIFESMIR---------------------------------RGC--QPNVAIYT 361
+ E F M + C QP +
Sbjct: 658 QVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 362 ALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGV-IISGLCKNERLEEAMQYFE-FCR 419
LI S ++ A++ ER+ G+ D + V II CK+ + A FE F +
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 420 ANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLD 479
GV Y+ LI GL +A ++ A+++F ++ GC D YN L+DA K GK+D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 480 EALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLW-DMMIDKGITPTAASFRAL 538
E L+K M C+ T+ I+I+G+ K ++AL L+ D+M D+ +PTA ++ L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 539 SIGLCLSGKVARACKILDELAPKGIIPETAFEDMITCLCKTGRIKEACKLADGIVDRERE 598
I L K+GR+ EA +L +G++D
Sbjct: 898 ----------------------------------IDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 599 IPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
I LIN KAG AD A L + G
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 219/499 (43%), Gaps = 1/499 (0%)
Query: 134 FTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFG 193
F A H E +++ L + G ++ + VF+ ++++ + ++ KS
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164
Query: 194 GLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVV 253
G +++ + R M+E G + Y+YN L++ L+ S F + V++ M P +
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 254 TYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM 313
TY++++ G K M + ME ++P+ T+ I+ G + + M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 314 DEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSM 373
D++G Y ++I LC K +FE M +P+ Y L+D ++ +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 374 NEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSL 433
+ + M+ +G PD VT+ +++ LCK EA + R G+ N Y++L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 434 IDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGC 493
I GL + R+D+A ELF M G +Y Y V ID K G AL F++M+ +G
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 494 DQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACK 553
+ + + K R+ EA +++ + D G+ P + ++ + G++ A K
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 554 ILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALR 612
+L E+ G P+ +I L K R+ EA K+ + + + + L+ L
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 613 KAGNADLAIKLMHSKIGVG 631
K G AI+L + G
Sbjct: 585 KNGKIQEAIELFEGMVQKG 603
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 150/323 (46%), Gaps = 2/323 (0%)
Query: 248 VGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCL 307
V P + TYN +I G + + A + F +++ PD TY L+ A G D
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 308 SLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIF-ESMIRRGCQPNVAIYTALIDS 366
LY EM E + +N+VI GL K G + ++ + M R P Y LID
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 367 YAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVN 426
+K G + EA +FE M G P+ Y ++I+G K + A F+ GV +
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 427 AMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFK 486
YS L+D L GRVDE F+E+ E G D CYN++I+ L K +L+EAL LF
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 487 RME-DEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
M+ G +YTY LI + EEA K+++ + G+ P +F AL G LS
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 546 GKVARACKILDELAPKGIIPETA 568
GK A + + G P T
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTG 1103
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 150/302 (49%), Gaps = 2/302 (0%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
VF ++K G + V+ N L+ ++G G ++EL +++ M + E + T+N +++GLV
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 229 NSMFIESS-ELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
+ ++ + +L + +M + P TY +I G K G+ +A + F M +P+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
Y LI G+ D+ +L+ M ++G+ Y++++ LC VG+ EG F+
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYE-GVEPDEVTYGVIISGLCKNE 406
+ G P+V Y +I+ K + EA+ +F MK G+ PD TY +I L
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 407 RLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYN 466
+EEA + + + G+ N +++LI G +G+ + A +++ MV G ++ Y
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Query: 467 VL 468
L
Sbjct: 1107 QL 1108
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
N Y LI+ G+ D +F + ++G + + L+ +G V+E L +
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGK-VGPDVVTYNTMIKGYCK 264
+ +KE+G+ P + YN ++NGL S +E + ++F M+ + + PD+ TYN++I
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 265 VGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
G ++A + + ++ ++P+ T+ LI+ L G P HA
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK------------------PEHA 1086
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTAL 363
Y A++++M+ G PN Y L
Sbjct: 1087 Y-----------------AVYQTMVTGGFSPNTGTYEQL 1108
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 109 LSPNFVSF--VLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRV 166
L+P+ V + ++ S R L LF + + +L Y SLI L + G V+
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 167 RLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMN 225
++NE++ G V N+LI+ + G E V+++M G P+ TY L N
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 220/453 (48%), Gaps = 8/453 (1%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
NL Y I L G++D + L E+G V N+LI +E
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSE-LVFKVMENGKVGPDVVTYNTMIKGYCK 264
M G+EP YTYN L+ G ++ +E +V + NG V PD TY ++I G C
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCH 368
Query: 265 VGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
G+T +A+ F + ++P+ I Y TLI+ +G L +EM EKG+
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMK 384
+N+++ GLCK+G + + + MI +G P++ + LI Y+ M A+ I + M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 385 YEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVD 444
GV+PD TY +++GLCK + E+ M+ ++ G A N ++ L++ L + ++D
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 445 EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDE-GCDQTVYTYTIL 503
EA L EEM K D+ + LID K G LD A LF++ME+ + TY I+
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 504 INGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI 563
I+ ++ A KL+ M+D+ + P ++R + G C +G V K L E+ G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 564 IPE-TAFEDMITCLCKTGRIKEACKLADGIVDR 595
IP T +I CLC R+ EA GI+ R
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAA----GIIHR 697
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 241/508 (47%), Gaps = 5/508 (0%)
Query: 109 LSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRL 168
L P V+ V++ K P L +F ++ + H L Y S+I+ L G + +
Sbjct: 5 LLPKHVTAVIK---CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEE 61
Query: 169 VFNELKEK-GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL 227
V +++E G M +K++G G V+E + V+ M EP++++YN +M+ L
Sbjct: 62 VLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVL 121
Query: 228 VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
V+S + + + V+ M + + PDV ++ +K +CK + A+ M ++ + +
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 181
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
+ Y T++ Y E L+ +M G+ + +N ++ LCK G E + +
Sbjct: 182 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
+I+RG PN+ Y I + G ++ A+ + + +G +PD +TY +I GLCKN +
Sbjct: 242 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
+EA Y G+ ++ Y++LI G K G V AE + + V G D + Y
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
LID L G+ + ALALF +G V Y LI G+ + EA +L + M +KG
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEAC 586
+ P +F L GLC G V+ A ++ + KG P+ F +I +++ A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 587 KLADGIVDREREIPGKIRTALINALRKA 614
++ D ++D + +L+N L K
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 228/507 (44%), Gaps = 8/507 (1%)
Query: 119 RNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGF 178
R V + NV R+ + +S+N +++ L G D+ V+ ++++G
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYN-----AIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 179 LMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMF-IESSE 237
V + +KSF L + +M G E ++ Y ++ G F E E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 238 LVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQAC 297
L K++ +G V + T+N +++ CK G ++ + + R V P+ TY IQ
Sbjct: 203 LFGKMLASG-VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 298 YLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNV 357
G+ D + + + E+G + YN +I GLCK K E M+ G +P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 358 AIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEF 417
Y LI Y K G + A I + G PD+ TY +I GLC A+ F
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 418 CRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGK 477
G+ N + Y++LI GL G + EA +L EM EKG + +N+L++ L K G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 478 LDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRA 537
+ +A L K M +G ++T+ ILI+G + + E AL++ D+M+D G+ P ++ +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 538 LSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRE 596
L GLC + K + + KG P F ++ LC+ ++ EA L + + ++
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 597 REIPGKIRTALINALRKAGNADLAIKL 623
LI+ K G+ D A L
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 198/404 (49%), Gaps = 12/404 (2%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
VFN GF+ SLI G L ++ GI+P++ YN L+ GL
Sbjct: 348 VFN-----GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 229 NS-MFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
N M +E+++L ++ E G + P+V T+N ++ G CK+G A + M ++ PD
Sbjct: 403 NQGMILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
T+ LI + ++ L + M + G++ + YN ++ GLCK K + +++
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M+ +GC PN+ + L++S + ++EA+ + E MK + V PD VT+G +I G CKN
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 408 LEEAMQYF-EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYN 466
L+ A F + A V+ + Y+ +I + V AE+LF+EMV++ D Y Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 467 VLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDK 526
+++D K G ++ M + G ++ T +IN + E R EA + M+ K
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 527 GITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFE 570
G+ P A + +I +VA +L++L K I A+E
Sbjct: 702 GLVPEAVN----TICDVDKKEVAAPKLVLEDLLKKSCITYYAYE 741
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 6/294 (2%)
Query: 358 AIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEF 417
+Y + +Y + G + EA+N+FERM + EP +Y I+S L + ++A + +
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 418 CRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGK 477
R G+ + ++ + K R A L M +GC + Y ++ +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 478 LDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRA 537
E LF +M G + T+ L+ + K+ +E KL D +I +G+ P ++
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 538 LSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRE 596
GLC G++ A +++ L +G P+ + ++I LCK + +EA +V+
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 597 REIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKRRVKFRSLVES 650
E LI K G LA +++ + G+ + + +RSL++
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF-----VPDQFTYRSLIDG 365
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 10/230 (4%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
+K + NL + L++ L +D + E+K K +LI F G ++
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 200 ELLWVWRSMKEN-GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
++R M+E + S TYN +++ + + +E +F+ M + +GPD TY M
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
+ G+CK G + M P T +I +E + H M +KG+
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Query: 319 EIPSHAYNLVIGGLCKVGK--CIEGHAIFESMIRRGCQPNVAIYTALIDS 366
+P + +C V K + E ++++ C A Y L D
Sbjct: 704 -VPE-----AVNTICDVDKKEVAAPKLVLEDLLKKSCITYYA-YELLFDG 746
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 241/516 (46%), Gaps = 23/516 (4%)
Query: 126 RPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAA 185
RP+V + L+ ++ N+ + LI C C + F +L + GF V
Sbjct: 121 RPDVAISLYR-KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179
Query: 186 NSLI----------KSFGGLG-MVE----ELLWVWRSMKENGIEPSLYTYNFLMNGL-VN 229
N+L+ ++ G MVE E + ++ M E G+ P + T+N L+NGL +
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 230 SMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKIT 289
+E++ LV K++ G + DVVTY T++ G CK+G T+ A+ ME +++PD +
Sbjct: 240 GRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 290 YMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMI 349
Y +I +G L+ EM EKGI YN +I G C G+ + + MI
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 350 RRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLE 409
R P+V + ALI + K G + EA + + M + + PD VTY +I G CK+ R +
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 410 EAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLI 469
+A F+ + V ++++ID +A RVDE +L E+ +G ++ YN LI
Sbjct: 419 DAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 470 DALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGIT 529
+ L+ A LF+ M G T IL+ G + + EEAL+L++++ I
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 530 PTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKL 588
++ + G+C KV A + L G+ P+ + MI+ C I +A L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 589 ADGIVDREREIPGKIRTALINALRKAGNADLAIKLM 624
+ D E LI KAG D +I+L+
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 194/421 (46%), Gaps = 35/421 (8%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
+LI+ L L G V + N++ KG + V +++ +G + L + M+E
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
I+P + Y+ +++ L ++ +F M + P+V TYN MI G+C G+ A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
R M R + PD +T+ LI A EG L EM + I + YN +I G
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 332 LCK-------------------------------VGKCIEGHAIFESMIRRGCQPNVAIY 360
CK + EG + + RRG N Y
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 361 TALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRA 420
LI + ++ ++N A ++F+ M GV PD +T +++ G C+NE+LEEA++ FE +
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 421 NGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGK--L 478
+ + ++ + Y+ +I G+ K +VDEA +LF + G D YNV+I CGK +
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF--CGKSAI 588
Query: 479 DEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRAL 538
+A LF +M+D G + TY LI G K +++++L M G + A + + +
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Query: 539 S 539
+
Sbjct: 649 A 649
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 210/472 (44%), Gaps = 40/472 (8%)
Query: 181 TVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVF 240
T N +I F + + + ++R M+ I ++Y++N L+ F + +L F
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI-----KCFCDCHKLSF 159
Query: 241 KVMENGKVG-----PDVVTYNTMIKGYCKVGKTQKAMEKFRAM------EAR-------- 281
+ GK+ PDVVT+NT++ G C + +A+ F M EA
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 282 -NVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIE 340
+ P IT+ TLI LEG +L ++M KG+ I Y ++ G+CK+G
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 341 GHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIIS 400
+ M +P+V IY+A+ID K G ++A +F M +G+ P+ TY +I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 401 GLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPR 460
G C R +A + + + + +++LI K G++ EAE+L +EM+ +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 461 DSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLW 520
D+ YN +I K + D+A K M D V T+ +I+ + R +E ++L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 521 DMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMITC----- 575
+ +G+ ++ L G C + A + E+ G+ P+T ITC
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT-----ITCNILLY 510
Query: 576 -LCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHS 626
C+ +++EA +L + I + ++ +I+ + K D A L S
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y ++ID L G + +F+E+ EKG V N +I F G + + R M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 210 ENGIEPSLYTYNFLMNGLV---------------------------NSMF--------IE 234
E I P + T+N L++ V NSM +
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 235 SSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLI 294
++ +F +M PDVVT+NT+I YC+ + + M+ R + R + + TY TLI
Sbjct: 419 DAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 295 QACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQ 354
+ ++ L+ EM G+ + N+++ G C+ K E +FE +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 355 PNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQY 414
+ Y +I K ++EA ++F + GVEPD TY V+ISG C + +A
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 415 FEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAK 474
F + NG + Y++LI G KAG +D++ EL EM G D++ ++ D +
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD 654
Query: 475 CGKLDEALA 483
G+LD++ +
Sbjct: 655 -GRLDKSFS 662
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
L++A+ +F++ + A+ + +I + R D A L+ +M + P + Y +N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEAL---------- 517
LI C KL +L+ F ++ G V T+ L++G+ E R EAL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 518 -----KLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI-IPETAFED 571
L+D M++ G+TP +F L GLCL G+V A +++++ KG+ I +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 572 MITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGN 616
++ +CK G K A L + + + I +A+I+ L K G+
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 200/377 (53%), Gaps = 6/377 (1%)
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
++ M+ GI LY+YN ++N L S F+ + +V K+M+ G PDVVT +++I G+
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG-YEPDVVTVSSLINGF 149
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
C+ + A++ ME +PD + Y T+I G + + L+ M+ G+ +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
YN ++ GLC G+ + + M+ R PNV +TA+ID + K G +EA+ ++E
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M V+PD TY +I+GLC + R++EA Q + G + + Y++LI+G K+ R
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
VDE +LF EM ++G D+ YN +I + G+ D A +F RM+ + TY+I
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSI 386
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
L+ G+ R E+AL L++ M I ++ + G+C G V A + L+ KG
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 563 IIPE-TAFEDMITCLCK 578
+ P+ ++ MI+ C+
Sbjct: 447 LKPDVVSYTTMISGFCR 463
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 4/441 (0%)
Query: 91 SSDMEANLDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQK-KYSHNLEC 149
S ++E +D FC+ + P+ V F ++K N L + + + H+L
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +I+CL C V ++ + G+ V +SLI F V + + + M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
E G P + YN +++G + + +F ME V D VTYN+++ G C G+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A R M R++ P+ IT+ +I EG F + LY EM + ++ YN +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
GLC G+ E + + M+ +GC P+V Y LI+ + K ++E +F M G+
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
D +TY II G + R + A + F + N YS L+ GL RV++A L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVL 403
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
FE M + D YN++I + K G +++A LF+ + +G V +YT +I+G +
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 510 EHRNEEALKLWDMMIDKGITP 530
+ + +++ L+ M + G+ P
Sbjct: 464 KRQWDKSDLLYRKMQEDGLLP 484
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 33/375 (8%)
Query: 285 PDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAI 344
P + + ++ ++D +SL+H M+ GI ++YN+VI LC+ + + ++
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 345 FESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCK 404
M++ G +P+V ++LI+ + + + +AI++ +M+ G PD V Y II G CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 405 NERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYC 464
+ +A++ F+ +GV +A+ Y+SL+ GL +GR +A L +MV + +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 465 YNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMI 524
+ +ID K GK EA+ L++ M D V+TY LING+ R +EA ++ D+M+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 525 DKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET----------------- 567
KG P ++ L G C S +V K+ E+A +G++ +T
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 568 ----------------AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINAL 611
+ ++ LC R+++A L + + E E+ +I+ +
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 612 RKAGNADLAIKLMHS 626
K GN + A L S
Sbjct: 427 CKIGNVEDAWDLFRS 441
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 214/428 (50%), Gaps = 3/428 (0%)
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLVNSMFIESS-ELVFKVMENGKVGPDVVTYNTMIKGY 262
V+ M + G+ ++ T+N L+NG +E + ++ +++ KV PD VTYNT++K
Sbjct: 191 VFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAM 250
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
K G+ E M+ + P+++TY L+ G + M + +
Sbjct: 251 SKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
YN++I GLC G EG + ++M QP+V Y LID +LG EA + E+
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF-EFCRANGVAVNAMFYSSLIDGLGKAG 441
M+ +GV+ ++VT+ + + LCK E+ E + E +G + + + Y +LI K G
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 442 RVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYT 501
+ A E+ EM +KG ++ N ++DAL K KLDEA L G TY
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPK 561
LI G F+E + E+AL++WD M ITPT ++F +L GLC GK A + DELA
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 562 GIIP-ETAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLA 620
G++P ++ F +I CK GR+++A + + + + L+N L K G + A
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 621 IKLMHSKI 628
+ ++ I
Sbjct: 611 LNFFNTLI 618
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 138/560 (24%), Positives = 247/560 (44%), Gaps = 43/560 (7%)
Query: 126 RPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGD--VDRVRLVFNELKEKGFLMTVS 183
+P+V L++F R K + L C LI + + R VF+++ + G + V
Sbjct: 146 KPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQ 205
Query: 184 AANSLIKSF-------GGLGMVEELLWVWR-----------------------------S 207
N L+ + LGM+E ++ ++
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 208 MKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGK 267
MK+NG+ P+ TYN L+ G ++ + + ++M+ V PD+ TYN +I G C G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 268 TQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNL 327
++ +E AM++ +QPD +TY TLI C+ G L +M+ G++ +N+
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 328 VIGGLCKVGKC-IEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYE 386
+ LCK K + E + G P++ Y LI +Y K+G ++ A+ + M +
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 387 GVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEA 446
G++ + +T I+ LCK +L+EA G V+ + Y +LI G + +V++A
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
E+++EM + +N LI L GK + A+ F + + G T+ +I G
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE 566
KE R E+A + ++ I P + L GLC G +A + L + +
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT 625
Query: 567 TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHS 626
+ MI+ CK ++KEA L + ++ E + I+ L + G +L+
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Query: 627 KIGVGYDRMGSIKRRVKFRS 646
G + GS+KR ++ +
Sbjct: 686 FSG----KFGSMKRDLQVET 701
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 205/450 (45%), Gaps = 13/450 (2%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
+Q +L Y LI+ L G + + + +K V N+LI LG+
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIES-SELVFKVMENGKVGPDVVTYNT 257
E + M+ +G++ + T+N + L E+ + V ++++ PD+VTY+T
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 258 MIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKG 317
+IK Y KVG A+E R M + ++ + IT T++ A E D +L + ++G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 318 IEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAI 377
+ Y +I G + K + +++ M + P V+ + +LI G A+
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 378 NIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGL 437
F+ + G+ PD+ T+ II G CK R+E+A +++ + + + L++GL
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 438 GKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTV 497
K G ++A F ++E+ D+ YN +I A K KL EA L ME++G +
Sbjct: 602 CKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 498 YTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDE 557
+TY I+ + ++ + E D ++ K + R L + + K + +E
Sbjct: 661 FTYNSFISLLMEDGKLSET----DELLKKFSGKFGSMKRDLQVE---TEKNPATSESKEE 713
Query: 558 LAPKGIIPETAFEDMITCLCKTGRIKEACK 587
L + I A+ D+I LC GR+KE +
Sbjct: 714 LNTEAI----AYSDVIDELCSRGRLKEHSR 739
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 160/353 (45%), Gaps = 12/353 (3%)
Query: 67 DLVSCPQNLNPSPWVRQILNLLDGSSDMEANLDSFCRKFLIKLSPNFVSFVLRNHDVS-- 124
+L+ ++L P V L+DG ++ +L++ RK + ++ + V H++S
Sbjct: 331 ELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA--RKLMEQMENDGVKANQVTHNISLK 388
Query: 125 ------KRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGF 178
KR V R +S ++ Y +LI GD+ + E+ +KG
Sbjct: 389 WLCKEEKREAVT-RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 179 LMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSEL 238
M N+++ + ++E + S + G TY L+ G +E +
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 239 VFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACY 298
++ M+ K+ P V T+N++I G C GKT+ AMEKF + + PD T+ ++I
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 299 LEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVA 358
EG + Y+E + + ++ N+++ GLCK G + F ++I + +
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTV 626
Query: 359 IYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEA 411
Y +I ++ K + EA ++ M+ +G+EPD TY IS L ++ +L E
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 355 PNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQY 414
P+ A++ + +Y G + A+ IF++M ++P+ +T ++ GL +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR---------- 178
Query: 415 FEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAK 474
Y S + + A E+F++MV+ G + +NVL++
Sbjct: 179 ---------------YPS-------SFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCL 216
Query: 475 CGKLDEALALFKRMEDE-GCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAA 533
GKL++AL + +RM E + TY ++ M K+ R + +L M G+ P
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV 276
Query: 534 SFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGI 592
++ L G C G + A +I++ + ++P+ + +I LC G ++E +L D +
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 232/506 (45%), Gaps = 42/506 (8%)
Query: 109 LSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRL 168
LSP V +L++ K P LF A R Y+H+ Y ++ L+ V+ V
Sbjct: 8 LSPKHVLKLLKS---EKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKE-NGIEPSLYTYNFLMNGL 227
+ ++ + A S+IK++G M ++ L V++ M+E G EP++ +YN L+N
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 228 VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
V + E +F E V P++ TYN +IK CK + +KA M +PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
+Y T+I G D L L+ EM E+G+ YN++I G K +++
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 348 MIR-RGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNE 406
++ PNV + +I +K G +++ + I+ERMK E D TY +I GLC
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC--- 301
Query: 407 RLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYN 466
AG VD+AE +F E+ E+ D YN
Sbjct: 302 --------------------------------DAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 467 VLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDK 526
++ +CGK+ E+L L++ ME + V +Y ILI G+ + + +EA +W +M K
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSVNIV-SYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 527 GITPTAASFRALSIGLCLSGKVARACKILDEL-APKGIIPETAFEDMITCLCKTGRIKEA 585
G ++ GLC++G V +A ++ E+ + G + A+ +I CLCK R++EA
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 586 CKLADGIVDREREIPGKIRTALINAL 611
L + E+ + ALI L
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGL 474
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 221/495 (44%), Gaps = 40/495 (8%)
Query: 109 LSPNFVSFVLRNHDVSK--RPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRV 166
P+ S+ +D++K + + L LF ++ + ++ CY LID D
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFD-EMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 167 RLVFNELKEKGFLM-TVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMN 225
+++ L E + V N +I G V++ L +W MK+N E LYTY+ L++
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 226 GLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQP 285
GL ++ ++ +E VF ++ K DVVTYNTM+ G+C+ GK ++++E +R ME +N
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SV 357
Query: 286 DKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIF 345
+ ++Y LI+ G D ++ M KG Y + I GLC G + +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 346 ESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKN 405
+ + G +V Y ++ID K + EA N+ + M GVE + +I GL ++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 406 ERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCY 465
RL EA + NG + Y+ LI GL KAG+ EA +EM+E G D Y
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 466 -----------------------------------NVLIDALAKCGKLDEALALFKRMED 490
N+LI L GKLD+A+ + ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 491 EGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVAR 550
C + TY L+ G FK + A +W M G+ P S+ + GLC+ V+
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 551 ACKILDELAPKGIIP 565
A + D+ GI P
Sbjct: 658 AMEFFDDARNHGIFP 672
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 231/477 (48%), Gaps = 3/477 (0%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
NL+ Y LI + ++ R + + ++GF V + +++I G +++ L ++
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESS-ELVFKVMENGKVGPDVVTYNTMIKGYCK 264
M E G+ P + YN L++G + +++ EL +++E+ V P+V T+N MI G K
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK 267
Query: 265 VGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
G+ ++ + M+ + D TY +LI G+ D S+++E+DE+ I
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMK 384
YN ++GG C+ GK E ++ M + N+ Y LI + G ++EA I+ M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 385 YEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVD 444
+G D+ TYG+ I GLC N + +A+ + ++G ++ Y+S+ID L K R++
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 445 EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILI 504
EA L +EM + G +S+ N LI L + +L EA + M GC TV +Y ILI
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 505 NGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGII 564
G+ K + EA M++ G P ++ L GLC K+ A ++ + G+
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 565 PETAFED-MITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLA 620
+ + +I LC G++ +A + + R L+ K G+++ A
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 193/400 (48%), Gaps = 1/400 (0%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
+Q + +L Y SLI L G+VD+ VFNEL E+ + V N+++ F G +
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
+E L +WR M E+ ++ +YN L+ GL+ + I+ + +++++M D TY
Sbjct: 342 KESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I G C G KA+ + +E+ D Y ++I + + +L EM + G+
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
E+ SH N +IGGL + + E M + GC+P V Y LI K G EA
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
+ M G +PD TY +++ GLC++ +++ A++ + +G+ + M ++ LI GL
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY 498
G++D+A + M + C + YN L++ K G + A ++ M G +
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 499 TYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRAL 538
+Y ++ G+ A++ +D + GI PT ++ L
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 3/283 (1%)
Query: 352 GCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEA 411
GC+P + Y L++++ + + ++F + GV P+ TY V+I CK + E+A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 412 MQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDA 471
+ ++ G + YS++I+ L KAG++D+A ELF+EM E+G D CYN+LID
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 472 LAKCGKLDEALALFKR-MEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITP 530
K A+ L+ R +ED V T+ I+I+G+ K R ++ LK+W+ M
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 531 TAASFRALSIGLCLSGKVARACKILDELAP-KGIIPETAFEDMITCLCKTGRIKEACKLA 589
++ +L GLC +G V +A + +EL K I + M+ C+ G+IKE+ +L
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 590 DGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGY 632
I++ + + LI L + G D A + GY
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 142/338 (42%)
Query: 136 WAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGL 195
W + K S N+ Y LI L G +D +++ + KG+ + I
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 196 GMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTY 255
G V + L V + ++ +G +Y Y +++ L +E + + K M V +
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
N +I G + + +A R M +P ++Y LI G F + EM E
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
G + Y++++ GLC+ K ++ ++ G + +V ++ LI +G +++
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
A+ + M++ + VTY ++ G K A + + G+ + + Y++++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALA 473
GL V A E F++ G Y +N+L+ A+
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 36.6 bits (83), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
NL Y +L++ GD +R +++ + + G + + N+++K V + +
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 206 RSMKENGIEPSLYTYNFLMNGLVN 229
+ +GI P++YT+N L+ +VN
Sbjct: 663 DDARNHGIFPTVYTWNILVRAVVN 686
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 238/505 (47%), Gaps = 60/505 (11%)
Query: 98 LDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCL 157
+D FCR+ + + +F+ ++ + GL+L + Y SLI+
Sbjct: 409 IDMFCRRGKLDTALSFLGEMV---------DTGLKLSVYP------------YNSLINGH 447
Query: 158 ALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSL 217
GD+ E+ K TV SL+ + G + + L ++ M GI PS+
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 218 YTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRA 277
YT+ L++GL + I + +F M V P+ VTYN MI+GYC+ G KA E +
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 278 MEARNVQPDKITYMTLIQA---------------------------CYL--------EGD 302
M + + PD +Y LI CY EG
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 303 FDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTA 362
+ LS+ EM ++G+++ Y ++I G K + + M RG +P+ IYT+
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 363 LIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANG 422
+ID+ +K G EA I++ M EG P+EVTY +I+GLCK + EA +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 423 VAVNAMFYSSLIDGLGKAGRVD--EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDE 480
N + Y +D L K G VD +A EL ++ KG ++ YN+LI + G+++E
Sbjct: 748 SVPNQVTYGCFLDILTK-GEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEE 805
Query: 481 ALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSI 540
A L RM +G TYT +IN + + + ++A++LW+ M +KGI P ++ L
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 541 GLCLSGKVARACKILDELAPKGIIP 565
G C++G++ +A ++ +E+ +G+IP
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLIP 890
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 231/471 (49%), Gaps = 8/471 (1%)
Query: 168 LVFNELKEKGFLM----TVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFL 223
LVF + K L+ T+SA + F G+ EL + M GI P +Y Y +
Sbjct: 177 LVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL---FNDMVSVGIRPDVYIYTGV 233
Query: 224 MNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV 283
+ L + ++ + ME ++V YN +I G CK K +A+ + + +++
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 284 QPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343
+PD +TY TL+ +F+ L + EM A + ++ GL K GK E
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 344 IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLC 403
+ + ++ G PN+ +Y ALIDS K +EA +F+RM G+ P++VTY ++I C
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 404 KNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSY 463
+ +L+ A+ + G+ ++ Y+SLI+G K G + AE EM+ K
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 464 CYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMM 523
Y L+ GK+++AL L+ M +G ++YT+T L++G+F+ +A+KL++ M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 524 IDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRI 582
+ + P ++ + G C G +++A + L E+ KGI+P+T ++ +I LC TG+
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 583 KEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYD 633
EA DG+ E+ T L++ + G + A+ + + G D
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 230/529 (43%), Gaps = 77/529 (14%)
Query: 183 SAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKV 242
+A +SL++ G +EE L + + + + G+ P+L+ YN L++ L +EL+F
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 243 MENGKVG--PDVVTY-----------------------------------NTMIKGYCKV 265
M GK+G P+ VTY N++I G+CK
Sbjct: 393 M--GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
G A M + ++P +TY +L+ +G + L LYHEM KGI + +
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKY 385
++ GL + G + +F M +PN Y +I+ Y + G M++A + M
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
+G+ PD +Y +I GLC + EA + + +N + Y+ L+ G + G+++E
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 446 AEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILIN 505
A + +EMV++G D CY VLID K L K M D G YT +I+
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 506 GMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAP----- 560
K +EA +WD+MI++G P ++ A+ GLC +G V A + ++ P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 561 ------------------------------KGIIPETAFEDM-ITCLCKTGRIKEACKLA 589
KG++ TA +M I C+ GRI+EA +L
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 590 DGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKI--GVGYDRMG 636
++ T +IN L + + AI+L +S G+ DR+
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 35/252 (13%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
Q+ +L CY LID D + E+ ++G S+I + G +
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELV-------------------F 240
E +W M G P+ TY ++NGL + F+ +E++
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 241 KVMENGKVG----------------PDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQ 284
++ G+V + TYN +I+G+C+ G+ ++A E M V
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 285 PDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAI 344
PD ITY T+I D + L++ M EKGI AYN +I G C G+ + +
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Query: 345 FESMIRRGCQPN 356
M+R+G PN
Sbjct: 880 RNEMLRQGLIPN 891
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 161 GDVDRVRLV-FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYT 219
G+VD + V + KG L + N LI+ F G +EE + M +G+ P T
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 220 YNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAME 279
Y ++N L ++ + ++ M + PD V YNT+I G C G+ KA E M
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 280 ARNVQPDKITYMT 292
+ + P+ T T
Sbjct: 885 RQGLIPNNKTSRT 897
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 202/405 (49%), Gaps = 1/405 (0%)
Query: 164 DRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFL 223
D V LV +++ E G+ +LI E + + M + G +P+L TY +
Sbjct: 173 DAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 224 MNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV 283
+NGL + + + ME K+ DVV +NT+I CK A+ F+ ME + +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 284 QPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343
+P+ +TY +LI G + L +M EK I +N +I K GK +E
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 344 IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLC 403
+++ MI+R P++ Y +L++ + +++A +FE M + PD VTY +I G C
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 404 KNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSY 463
K++R+E+ + F G+ + + Y++LI GL G D A+++F++MV G P D
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 464 CYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMM 523
Y++L+D L GKL++AL +F M+ +Y YT +I GM K + ++ L+ +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 524 IDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA 568
KG+ P ++ + GLC + A +L ++ G +P +
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 216/442 (48%), Gaps = 3/442 (0%)
Query: 179 LMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESS-E 237
L ++ N L+ + + + ++ + M+ I LYTYN L+N I +
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 238 LVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQAC 297
L+ K+M+ G P +VT ++++ GYC + A+ M +PD IT+ TLI
Sbjct: 142 LLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 298 YLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNV 357
+L ++L M ++G + Y +V+ GLCK G + M + +V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 358 AIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEF 417
I+ +IDS K +++A+N+F+ M+ +G+ P+ VTY +IS LC R +A Q
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 418 CRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGK 477
+ N + +++LID K G+ EAE+L+++M+++ D + YN L++ +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 478 LDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRA 537
LD+A +F+ M + C V TY LI G K R E+ +L+ M +G+ ++
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 538 LSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRE 596
L GL G A K+ ++ G+ P+ + ++ LC G++++A ++ D + E
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 597 REIPGKIRTALINALRKAGNAD 618
++ I T +I + KAG D
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVD 522
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 225/476 (47%), Gaps = 8/476 (1%)
Query: 117 VLRN--HDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELK 174
+LRN HD+ +GL F + + +E + L+ +A D V + +++
Sbjct: 56 ILRNGLHDMKLDDAIGL--FGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 175 EKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFI- 233
+ + N LI F + L + M + G EPS+ T + L+NG + I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 234 ESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTL 293
++ LV +++E G PD +T+ T+I G K +A+ M R QP+ +TY +
Sbjct: 173 DAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 294 IQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGC 353
+ GD D L+L ++M+ IE +N +I LCK + +F+ M +G
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 354 QPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQ 413
+PNV Y++LI G ++A + M + + P+ VT+ +I K + EA +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 414 YFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALA 473
++ + + Y+SL++G R+D+A+++FE MV K C D YN LI
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 474 KCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAA 533
K ++++ LF+ M G TYT LI G+F + + A K++ M+ G+ P
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 534 SFRALSIGLCLSGKVARACKILDELAPKGI-IPETAFEDMITCLCKTGRIKEACKL 588
++ L GLC +GK+ +A ++ D + I + + MI +CK G++ + L
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 194/372 (52%), Gaps = 2/372 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
Q+ NL Y +++ L GD D + N+++ V N++I S V+
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ L +++ M+ GI P++ TY+ L++ L + + ++S+L+ ++E K+ P++VT+N +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNAL 336
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I + K GK +A + + M R++ PD TY +L+ + D ++ M K
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
YN +I G CK + +G +F M RG + YT LI G + A
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
+F++M +GV PD +TY +++ GLC N +LE+A++ F++ + + + ++ Y+++I+G+
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY 498
KAG+VD+ +LF + KG + YN +I L L EA AL K+M+++G
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 499 TYTILINGMFKE 510
TY LI ++
Sbjct: 577 TYNTLIRAHLRD 588
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 189/390 (48%)
Query: 196 GMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTY 255
G + L + M+ IE + +N +++ L ++ + +FK ME + P+VVTY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
+++I C G+ A + M + + P+ +T+ LI A EG F LY +M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
+ I+ YN ++ G C + + +FE M+ + C P+V Y LI + K + +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
+F M + G+ D VTY +I GL + + A + F+ ++GV + M YS L+D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
GL G++++A E+F+ M + D Y Y +I+ + K GK+D+ LF + +G
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
V TY +I+G+ + +EA L M + G P + ++ L G A + +++
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 556 DELAPKGIIPETAFEDMITCLCKTGRIKEA 585
E+ + + + ++ + GR+ ++
Sbjct: 599 REMRSCRFVGDASTIGLVANMLHDGRLDKS 628
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 188/411 (45%), Gaps = 2/411 (0%)
Query: 222 FLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEAR 281
L NGL + M ++ + +F M + P +V +N ++ K+ K + M+
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 282 NVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEG 341
+ TY LI L+L +M + G E + ++ G C + +
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 342 HAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISG 401
A+ + M+ G +P+ +T LI +EA+ + +RM G +P+ VTYGV+++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 402 LCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRD 461
LCK + A+ A + + + ++++ID L K VD+A LF+EM KG +
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 462 SYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWD 521
Y+ LI L G+ +A L M ++ + + T+ LI+ KE + EA KL+D
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 522 MMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTG 580
MI + I P ++ +L G C+ ++ +A ++ + + K P+ + +I CK+
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 581 RIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
R+++ +L + R T LI L G+ D A K+ + G
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 236/474 (49%), Gaps = 7/474 (1%)
Query: 117 VLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEK 176
+LRN S + N L LFT + ++ + L++ +A D V + + L+
Sbjct: 43 ILRNGLHSLQFNEALDLFTHMVESRPLPSIID-FTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 177 GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL-VNSMFIES 235
G + N L+ F M + G EP + T+ L+NG + + E+
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 236 SELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQ 295
+V +++E G + PDVV Y T+I CK G A+ F ME ++PD + Y +L+
Sbjct: 162 MSMVNQMVEMG-IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQP 355
G + SL M ++ I+ +N +I K GK ++ ++ MIR P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 356 NVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYF 415
N+ YT+LI+ + G ++EA +F M+ +G PD V Y +I+G CK +++++AM+ F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 416 EFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKC 475
G+ N + Y++LI G G+ G+ + A+E+F MV +G P + YNVL+ L
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 476 GKLDEALALFKRM---EDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTA 532
GK+ +AL +F+ M E +G ++TY +L++G+ + E+AL +++ M + +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 533 ASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEA 585
++ + G+C +GKV A + L KG+ P + MI+ L + G EA
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 193/383 (50%), Gaps = 3/383 (0%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
+ SLI+ L ++ + N++ E G V ++I S G V L ++ M+
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
GI P + Y L+NGL NS ++ + + M K+ PDV+T+N +I + K GK
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A E + M ++ P+ TY +LI +EG D +++ M+ KG AY +I
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
G CK K + IF M ++G N YT LI + ++G N A +F M GV
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRA---NGVAVNAMFYSSLIDGLGKAGRVDEA 446
P+ TY V++ LC N ++++A+ FE + +GVA N Y+ L+ GL G++++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
+FE+M ++ Y ++I + K GK+ A+ LF + +G V TYT +I+G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 507 MFKEHRNEEALKLWDMMIDKGIT 529
+F+E EA L+ M + G++
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 230/499 (46%), Gaps = 10/499 (2%)
Query: 75 LNPSPWVRQILN----LLDGSSDMEAN--LDSFCRKFLIKLSPNFVSFVLRNHDVSKRPN 128
L+ S WVR N L +G ++ N LD F + P+ + F + ++K
Sbjct: 28 LDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKK 87
Query: 129 VGLRLFTWAARQ-KKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANS 187
+ + Q SH+L L++C ++ + GF + S
Sbjct: 88 FDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTS 147
Query: 188 LIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGK 247
LI F +EE + + M E GI+P + Y +++ L + + + +F MEN
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 248 VGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCL 307
+ PDVV Y +++ G C G+ + A R M R ++PD IT+ LI A EG F
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 308 SLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSY 367
LY+EM I Y +I G C G E +F M +GC P+V YT+LI+ +
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 368 AKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNA 427
K +++A+ IF M +G+ + +TY +I G + + A + F + GV N
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 428 MFYSSLIDGLGKAGRVDEAEELFEEMVEK---GCPRDSYCYNVLIDALAKCGKLDEALAL 484
Y+ L+ L G+V +A +FE+M ++ G + + YNVL+ L GKL++AL +
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 485 FKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCL 544
F+ M D + TYTI+I GM K + + A+ L+ + KG+ P ++ + GL
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Query: 545 SGKVARACKILDELAPKGI 563
G A + ++ G+
Sbjct: 508 EGLKHEAHVLFRKMKEDGV 526
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 209/434 (48%), Gaps = 10/434 (2%)
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGK---VGPDVVTYN 256
E L ++ M E+ PS+ + L+N + ++ ++V + ++ + V D+ T N
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAK---MKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 257 TMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEK 316
++ +C+ + A M +PD +T+ +LI L + +S+ ++M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 317 GIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEA 376
GI+ Y +I LCK G ++F+ M G +P+V +YT+L++ G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 377 INIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDG 436
++ M ++PD +T+ +I K + +A + + +A N Y+SLI+G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 437 LGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQT 496
G VDEA ++F M KGC D Y LI+ KC K+D+A+ +F M +G
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 497 VYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILD 556
TYT LI G + + A +++ M+ +G+ P ++ L LC +GKV +A I +
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 557 ELAPK---GIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALR 612
++ + G+ P + ++ LC G++++A + + + RE +I T +I +
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 613 KAGNADLAIKLMHS 626
KAG A+ L S
Sbjct: 472 KAGKVKNAVNLFCS 485
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 217/427 (50%), Gaps = 4/427 (0%)
Query: 170 FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVN 229
FNE+ + GF+ + N L+ G + W + + ++ + +Y++ L+ G
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQW-WSFFNENKSKVVLDVYSFGILIKGCCE 175
Query: 230 SMFIESS-ELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKI 288
+ IE S +L+ ++ E G P+VV Y T+I G CK G+ +KA + F M + ++
Sbjct: 176 AGEIEKSFDLLIELTEFG-FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 289 TYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESM 348
TY LI + G +Y +M E G+ + YN V+ LCK G+ + +F+ M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 349 IRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERL 408
RG N+ Y LI + +NEA + ++MK +G+ P+ +TY +I G C +L
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 409 EEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVL 468
+A+ ++ G++ + + Y+ L+ G + G A ++ +EM E+G Y +L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 469 IDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGI 528
ID A+ +++A+ L ME+ G V+TY++LI+G + + EA +L+ M++K
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 529 TPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA-FEDMITCLCKTGRIKEACK 587
P + + +G C G RA K+L E+ K + P A + MI LCK + KEA +
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 588 LADGIVD 594
L + ++D
Sbjct: 535 LVEKMID 541
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 200/407 (49%), Gaps = 5/407 (1%)
Query: 170 FNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVN 229
FNE K K ++ V + LIK G +E+ + + E G P++ Y L++G
Sbjct: 152 FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 230 SMFIESSELVFKVMENGKVG--PDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
IE ++ +F E GK+G + TY +I G K G ++ E + M+ V P+
Sbjct: 211 KGEIEKAKDLF--FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
TY ++ +G ++ EM E+G+ YN +IGGLC+ K E + + +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M G PN+ Y LID + +G + +A+++ +K G+ P VTY +++SG C+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
A + + G+ + + Y+ LID ++ +++A +L M E G D + Y+V
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
LI G+++EA LFK M ++ C+ Y +I G KE + ALKL M +K
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFEDMIT 574
+ P AS+R + LC K A ++++++ GI P T+ +I+
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 188/397 (47%), Gaps = 35/397 (8%)
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
+S N+ Y +LID G++++ + +F E+ + G + LI G+ ++
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
++ M+E+G+ P+LYTYN +MN L + + VF M V ++VTYNT+I G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
C+ K +A + M++ + P+ ITY TLI G LSL ++ +G+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
YN+++ G C+ G + + M RG +P+ YT LID++A+ +M +AI +
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M+ G+ PD TY V+I G C ++ EA + F
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF--------------------------- 466
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
+ MVEK C + YN +I K G AL L K ME++ V +Y
Sbjct: 467 --------KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALS 539
+I + KE +++EA +L + MID GI P+ + +S
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 35/301 (11%)
Query: 359 IYTALIDSYAKLGSMNEAINIFERMKYEGVEP---------------------------- 390
+Y +I+SY + S+N +I+ F M G P
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 391 ------DEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVD 444
D ++G++I G C+ +E++ G + N + Y++LIDG K G ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 445 EAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILI 504
+A++LF EM + G + Y VLI+ L K G + ++++M+++G +YTY ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 505 NGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGII 564
N + K+ R ++A +++D M ++G++ ++ L GLC K+ A K++D++ GI
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 565 PE-TAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKL 623
P + +I C G++ +A L + R L++ + G+ A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 624 M 624
+
Sbjct: 396 V 396
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
R++ S N+ Y +LI L ++ V +++K G + N+LI F G+G +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ L + R +K G+ PSL TYN L++G + + K ME + P VTY +
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I + + +KA++ +ME + PD TY LI ++G + L+ M EK
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
E YN +I G CK G + + M + PNVA Y +I+ K EA
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 379 IFERMKYEGVEPDEVTYGVI 398
+ E+M G++P +I
Sbjct: 535 LVEKMIDSGIDPSTSILSLI 554
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 242/495 (48%), Gaps = 13/495 (2%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
SH+L Y I+C + V ++ + G+ + +SL+ + + + +
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 204 VWRSMKENGIEPSLYTYNFLMNGL-VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G +P +T+ L++GL +++ E+ LV ++++ G PD+VTY T++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGL 233
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK G A+ MEA ++ + + + T+I + + + L+ EM+ KGI
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
YN +I LC G+ + + +M+ + PNV + ALID++ K G + EA + E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M ++PD +TY ++I+G C + RL+EA Q F+F + N Y++LI+G K R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTI 502
V++ ELF EM ++G ++ Y +I + G D A +FK+M + TY+I
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 503 LINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKG 562
L++G+ + + AL ++ + + + + G+C +GKV A + L+ K
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK- 532
Query: 563 IIPE-TAFEDMITCLCKTGRIKEACKL-----ADGIVDREREIPGKIRTALINALRKAGN 616
P+ + MI+ LC ++EA L DG + IR L + R A +
Sbjct: 533 --PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR-AAS 589
Query: 617 ADLAIKLMHSKIGVG 631
A+L IK M S VG
Sbjct: 590 AEL-IKEMRSSGFVG 603
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 212/464 (45%), Gaps = 2/464 (0%)
Query: 164 DRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFL 223
D V L + +K + F ++ N L+ + + E ++ + M+ GI LYTY+
Sbjct: 66 DAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 224 MNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV 283
+N + + V M PD+VT ++++ GYC + A+ M
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 284 QPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343
+PD T+ TLI +L ++L +M ++G + Y V+ GLCK G
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 344 IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLC 403
+ M + NV I+ +IDS K + A+++F M+ +G+ P+ VTY +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 404 KNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSY 463
R +A + + N + +++LID K G++ EAE+L EEM+++ D+
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 464 CYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMM 523
YN+LI+ +LDEA +FK M + C + TY LING K R E+ ++L+ M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 524 IDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRI 582
+G+ ++ + G +G A + ++ + + + ++ LC G++
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 583 KEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHS 626
A + + E E+ I +I + KAG A L S
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 5/401 (1%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
Q+ +L Y ++++ L GD+D + N+++ V N++I S VE
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ ++ M+ GI P++ TYN L+N L N + ++S L+ ++E K+ P+VVT+N +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNAL 334
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I + K GK +A + M R++ PD ITY LI + D ++ M K
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
YN +I G CK + +G +F M +RG N YT +I + + G + A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
+F++M V D +TY +++ GLC +L+ A+ F++ + + + +N Y+++I+G+
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY 498
KAG+V EA +LF + K D YN +I L L EA LF++M+++G
Sbjct: 515 KAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 499 TYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALS 539
TY LI ++ + +L M G A++ ++
Sbjct: 572 TYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVT 612
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 204/436 (46%), Gaps = 3/436 (0%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
+ +LI L L + +++ ++G + +++ G ++ L + M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
I+ ++ +N +++ L +E + +F ME + P+VVTYN++I C G+
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A M + + P+ +T+ LI A + EG L+ EM ++ I+ + YNL+I
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
G C + E +F+ M+ + C PN+ Y LI+ + K + + + +F M G+
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
+ VTY II G + + A F+ +N V + M YS L+ GL G++D A +
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
F+ + + + + YN +I+ + K GK+ EA LF + V TY +I+G+
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCS 547
Query: 510 EHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAF 569
+ +EA L+ M + G P + ++ L A + +++ E+ G + + +
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Query: 570 EDMITCLCKTGRIKEA 585
++T + GR+ ++
Sbjct: 608 ISLVTNMLHDGRLDKS 623
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 181/399 (45%), Gaps = 1/399 (0%)
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L N L + + ++ + +F M + P +V +N ++ K+ K + + M+
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
+ D TY I L++ +M + G E + ++ G C + +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
A+ + M+ G +P+ +T LI +EA+ + ++M G +PD VTYG +++GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
CK ++ A+ A + N + ++++ID L K V+ A +LF EM KG +
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
YN LI+ L G+ +A L M ++ + V T+ LI+ FKE + EA KL +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGR 581
MI + I P ++ L G C+ ++ A ++ + K +P + +I CK R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 582 IKEACKLADGIVDREREIPGKIRTALINALRKAGNADLA 620
+++ +L + R T +I +AG+ D A
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 180/358 (50%)
Query: 208 MKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGK 267
M + G EP L T+ L+NG + IE + +F + P+VVTY T+I+ CK
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 268 TQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNL 327
A+E F M +P+ +TY L+ G + L +M ++ IE +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 328 VIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEG 387
+I KVGK +E ++ MI+ P+V Y +LI+ G ++EA +F M+ G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 388 VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
P+EV Y +I G CK++R+E+ M+ F GV N + Y+ LI G GR D A+
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 448 ELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGM 507
E+F +M + P D YNVL+D L GK+++AL +F+ M D + TYTI+I GM
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 508 FKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIP 565
K + E+A L+ + KG+ P ++ + G C G + A + ++ G +P
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 220/498 (44%), Gaps = 24/498 (4%)
Query: 45 SNPRSANSFPPPE---WVEPFNDVSDLVSCPQNLNPSPWVRQILNLLDGSSDMEAN--LD 99
SNPR+A S W+ F+ R+IL +G +++ N LD
Sbjct: 28 SNPRTAASLSLCGFCFWIRAFSSY----------------RKILR--NGLHNLQFNDALD 69
Query: 100 SFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLI-DCLA 158
F R + P+ + F ++K + + + Q L C +++ C+
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC 129
Query: 159 LCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLY 218
L R ++ + GF + SL+ + +E+ + ++ + G +P++
Sbjct: 130 LSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 219 TYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAM 278
TY L+ L + + + +F M P+VVTYN ++ G C++G+ A R M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 279 EARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKC 338
R ++P+ IT+ LI A G LY+ M + + Y +I GLC G
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 339 IEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVI 398
E +F M R GC PN IYT LI + K + + + IF M +GV + +TY V+
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 399 ISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGC 458
I G C R + A + F + + Y+ L+DGL G+V++A +FE M ++
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 459 PRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALK 518
+ Y ++I + K GK+++A LF + +G V TYT +I+G + EA
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 519 LWDMMIDKGITPTAASFR 536
L+ M + G P + ++
Sbjct: 490 LFKKMKEDGFLPNESVYK 507
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 190/410 (46%), Gaps = 2/410 (0%)
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L NGL N F ++ +L F M + + P ++ + ++ K+ + + F M+
Sbjct: 55 LRNGLHNLQFNDALDL-FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
+ P T ++ L +M + G E + ++ G C + +
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
A+F+ ++ G +PNV YT LI K +N A+ +F +M G P+ VTY +++GL
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
C+ R +A + N + +++LID K G++ EA+EL+ M++ D
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
+ Y LI+ L G LDEA +F ME GC YT LI+G K R E+ +K++
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGR 581
M KG+ ++ L G CL G+ A ++ ++++ + P+ + ++ LC G+
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 582 IKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVG 631
+++A + + + RE +I T +I + K G + A L S G
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 208/440 (47%), Gaps = 9/440 (2%)
Query: 147 LECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWR 206
+ Y +++D + D + +VF LKE GF TV LI + +G + + L V R
Sbjct: 449 IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 207 SMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVG 266
MKE G++ +L TY+ ++NG V ++ VF+ M + PDV+ YN +I +C +G
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 267 KTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYN 326
+A++ + M+ +P T+M +I GD L ++ M G H +N
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 327 LVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYE 386
+I GL + + + I + M G N YT ++ YA +G +A F R++ E
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 387 GVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEA 446
G++ D TY ++ CK+ R++ A+ + A + N+ Y+ LIDG + G V EA
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
+L ++M ++G D + Y I A +K G ++ A + ME G + TYT LI G
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARA------CKILDELAP 560
+ E+AL ++ M GI P A + L L +A A I E+
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVE 868
Query: 561 KGIIPE--TAFEDMITCLCK 578
G+I + TA CLCK
Sbjct: 869 AGLIVDMGTAVH-WSKCLCK 887
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 203/463 (43%), Gaps = 36/463 (7%)
Query: 161 GDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTY 220
GD+ R R F ++ +G T SLI ++ ++E L R MKE GIE SL TY
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 221 NFLMNGLVNSMFIESSELVF-----------------------------------KVMEN 245
+ ++ G + E+++ F + ME
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 246 GKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDS 305
+ + Y+TM+ GY V +K + F+ ++ P +TY LI G
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 306 CLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALID 365
L + M E+G++ Y+++I G K+ A+FE M++ G +P+V +Y +I
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 366 SYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV 425
++ +G+M+ AI + M+ P T+ II G K+ + +++ F+ R G
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 426 NAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF 485
++ LI+GL + ++++A E+ +EM G + + Y ++ A G +A F
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 486 KRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
R+++EG D ++TY L+ K R + AL + M + I + + L G
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 546 GKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACK 587
G V A ++ ++ +G+ P+ + I+ K G + A +
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 214/507 (42%), Gaps = 71/507 (14%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEEL-LW----- 203
Y SLI A+ D+D ++KE+G M++ + ++ F G E W
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 204 -----------------------------VWRSMKENGIEPSLYTYNFLMNGLVNSMFIE 234
+ R M+E GI+ + Y+ +M+G +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 235 SSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLI 294
+VFK ++ P VVTY +I Y KVGK KA+E R M+ V+ + TY +I
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 295 QACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGK----------------- 337
D+ + +++ +M ++G++ YN +I C +G
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 338 --------CIEGHA----------IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINI 379
I G+A +F+ M R GC P V + LI+ + M +A+ I
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 380 FERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGK 439
+ M GV +E TY I+ G +A +YF + G+ V+ Y +L+ K
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 440 AGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYT 499
+GR+ A + +EM + PR+S+ YN+LID A+ G + EA L ++M+ EG ++T
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 500 YTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELA 559
YT I+ K A + + M G+ P ++ L G + +A +E+
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Query: 560 PKGIIPETA-FEDMITCLCKTGRIKEA 585
GI P+ A + ++T L I EA
Sbjct: 827 AMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 35/349 (10%)
Query: 250 PDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSL 309
P + M+K Y + G +A E F M AR + P Y +LI A + D D LS
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 310 YHEMDEKGIEIPSHAYNLVIGGLCKV-------------------------GKCIEGH-- 342
+M E+GIE+ Y++++GG K GK I H
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 343 --------AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVT 394
A+ M G +AIY ++D Y + + + +F+R+K G P VT
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 395 YGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMV 454
YG +I+ K ++ +A++ + GV N YS +I+G K A +FE+MV
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 455 EKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNE 514
++G D YN +I A G +D A+ K M+ T T+ +I+G K
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 515 EALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGI 563
+L+++DMM G PT +F L GL ++ +A +ILDE+ G+
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 160/343 (46%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
+++ HNL+ Y +I+ D VF ++ ++G V N++I +F G+G +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ + + M++ P+ T+ +++G S + S VF +M P V T+N +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I G + + +KA+E M V ++ TY ++Q GD + + +G+
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
++ Y ++ CK G+ A+ + M R N +Y LID +A+ G + EA +
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
+ ++MK EGV+PD TY IS K + A Q E A GV N Y++LI G
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEA 481
+A ++A +EEM G D Y+ L+ +L + EA
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 134/312 (42%), Gaps = 15/312 (4%)
Query: 347 SMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNE 406
S + +P+ + ++ Y + G M+ A FERM+ G+ P Y +I
Sbjct: 299 SAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGR 358
Query: 407 RLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYN 466
++EA+ + G+ ++ + YS ++ G KAG + A+ F+E ++ Y
Sbjct: 359 DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYG 418
Query: 467 VLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDK 526
+I A + ++ A AL + ME+EG D + Y +++G ++ L ++ + +
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 527 GITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEA 585
G TPT ++ L GK+++A ++ + +G+ + MI K A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 586 CKLADGIVDREREIPGKIRTALINALRKAGNADLAI-------KLMHS-------KIGVG 631
+ + +V + + +I+A GN D AI KL H I G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 632 YDRMGSIKRRVK 643
Y + G ++R ++
Sbjct: 599 YAKSGDMRRSLE 610
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 6/275 (2%)
Query: 73 QNLNPSPWVRQILNLLDG---SSDMEANLDSFCRKFLIKLSPNFVSFV-LRNHDVSKRPN 128
Q L P R + ++ G S DM +L+ F P +F L N V KR
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 129 VGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSL 188
S N Y ++ A GD + F L+ +G + + +L
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 189 IKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFI-ESSELVFKVMENGK 247
+K+ G ++ L V + M I + + YN L++G + E+++L+ ++ + G
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG- 759
Query: 248 VGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCL 307
V PD+ TY + I K G +A + MEA V+P+ TY TLI+ + L
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Query: 308 SLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
S Y EM GI+ Y+ ++ L E +
Sbjct: 820 SCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
++ Y S I + GD++R E++ G + +LIK + + E+ L +
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVM 243
MK GI+P Y+ L+ L++ I + + VM
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVM 860
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/612 (26%), Positives = 268/612 (43%), Gaps = 64/612 (10%)
Query: 80 WVRQIL-NLLDGSSDMEANLDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAA 138
W+R+++ N L +E D + L+P +V VL ++ + P + + F W+
Sbjct: 83 WIRKVVHNDLWDDPGLEKLFD-------LTLAPIWVPRVLV--ELKEDPKLAFKFFKWSM 133
Query: 139 RQKKYSHNLECY------------------------ISLIDC------------------ 156
+ + H++E Y +S DC
Sbjct: 134 TRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFG 193
Query: 157 --------LALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSM 208
L G ++ F+++K + N L+ F LG +++ ++ M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 209 KENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
G P+++TYN +++ + +E++ +F+ M+ + PD VTYN+MI G+ KVG+
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
+ F M+ +PD ITY LI G L Y EM G++ +Y+ +
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGV 388
+ CK G + + M R G PN YT+LID+ K+G++++A + M GV
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 389 EPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEE 448
E + VTY +I GLC ER++EA + F GV N Y++LI G KA +D A E
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 449 LFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMF 508
L E+ +G D Y I L K++ A + M++ G YT L++ F
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 509 KEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA 568
K E L L D M + I T +F L GLC + V++A + ++ + A
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 569 --FEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNA--DLAIKLM 624
F MI LCK +++ A L + +V + T+L++ K GN LA++
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 625 HSKIGVGYDRMG 636
++IG+ D +
Sbjct: 674 MAEIGMKLDLLA 685
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 222/466 (47%), Gaps = 41/466 (8%)
Query: 137 AARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLG 196
AR +++N+ +IDC+ GDV+ R +F E+K +G + NS+I FG +G
Sbjct: 257 GARPTVFTYNI-----MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 197 MVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYN 256
+++ + + MK+ EP + TYN L+N + ++ M+ + P+VV+Y+
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 257 TMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEK 316
T++ +CK G Q+A++ + M + P++ TY +LI A G+ L +EM +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 317 GIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEA 376
G+E Y +I GLC + E +F M G PN+A Y ALI + K +M+ A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 377 INIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDG 436
+ + +K G++PD + YG I GLC E++E A + G+ N++ Y++L+D
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 437 LGKAGRVDEAEELFEEMVEK------------------------------------GCPR 460
K+G E L +EM E G
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 461 DSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLW 520
++ + +ID L K +++ A LF++M +G YT L++G FK+ EAL L
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 521 DMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE 566
D M + G+ ++ +L GL ++ +A L+E+ +GI P+
Sbjct: 672 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 163/338 (48%), Gaps = 5/338 (1%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y SLID G++ + NE+ + G V +LI ++E ++ M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
G+ P+L +YN L++G V + ++ + + ++ + PD++ Y T I G C + K +
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A M+ ++ + + Y TL+ A + G+ L L EM E IE+ + ++I
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 330 GGLCKVGKCIEGHAIFESMIRR--GCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEG 387
GLCK K + + + I G Q N AI+TA+ID K + A +FE+M +G
Sbjct: 585 DGLCK-NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 388 VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
+ PD Y ++ G K + EA+ + G+ ++ + Y+SL+ GL ++ +A
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 448 ELFEEMVEKGC-PRDSYCYNVLIDALAKCGKLDEALAL 484
EEM+ +G P + C +VL + G +DEA+ L
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVL-KKHYELGCIDEAVEL 740
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 15/191 (7%)
Query: 85 LNLLDGSS--DMEANLDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKK 142
L+LLD D+E + +FC + + +N VSK + F +
Sbjct: 562 LHLLDEMKELDIEVTVVTFCV---------LIDGLCKNKLVSK----AVDYFNRISNDFG 608
Query: 143 YSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELL 202
N + ++ID L V+ +F ++ +KG + +A SL+ G V E L
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 203 WVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G++ L Y L+ GL + ++ + + M + PD V +++K +
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
Query: 263 CKVGKTQKAME 273
++G +A+E
Sbjct: 729 YELGCIDEAVE 739
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 224/492 (45%), Gaps = 27/492 (5%)
Query: 158 ALCGDVDRVRLVFNELKEKGFLMTVSAA--------NSLIKSFGGLGMVEELLWVWRSMK 209
++CGD D + +L EK + ++A +S + G E+ V R M
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
G P TY+ ++N L N+ +E + L+F+ M+ G + DV TY M+ +CK G +
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
+A + F M P+ +TY LI A L+ M +G Y+ +I
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 330 GGLCKVGKCIEGHAIFESMI----------------RRGCQPNVAIYTALIDSYAKLGSM 373
G CK G+ + IFE M +PNV Y AL+D + K +
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 374 NEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSL 433
EA + + M EG EP+++ Y +I GLCK +L+EA + +G YSSL
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 434 IDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGC 493
ID K R D A ++ +M+E C + Y +ID L K GK DEA L + ME++GC
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 494 DQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACK 553
V TYT +I+G + E L+L + M KG+ P ++R L C +G + A
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835
Query: 554 ILDELAPKGIIPETA-FEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALR 612
+L+E+ TA + +I K E+ L D I + + LI+ L
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLI 893
Query: 613 KAGNADLAIKLM 624
KA ++A++L+
Sbjct: 894 KAQRLEMALRLL 905
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 217/477 (45%), Gaps = 52/477 (10%)
Query: 168 LVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL 227
L+F E+K G + V ++ SF G++E+ + M+E G P++ TY L++
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 228 VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAM--------- 278
+ + + + +F+ M + P++VTY+ +I G+CK G+ +KA + F M
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV 623
Query: 279 -------EARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGG 331
+ + +P+ +TY L+ + L M +G E Y+ +I G
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 332 LCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPD 391
LCKVGK E + M G + Y++LID Y K+ + A + +M P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 392 EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFE 451
V Y +I GLCK + +EA + + G N + Y+++IDG G G+++ EL E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 452 EMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRME---------------------- 489
M KG + Y VLID K G LD A L + M+
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863
Query: 490 -------DE-GCDQT---VYTYTILINGMFKEHRNEEALKLWDMM--IDKGITPTAASFR 536
DE G D T + Y +LI+ + K R E AL+L + + + ++++
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 923
Query: 537 ALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEACKLADGI 592
+L LCL+ KV A ++ E+ KG+IPE +F +I L + +I EA L D I
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 171/719 (23%), Positives = 288/719 (40%), Gaps = 110/719 (15%)
Query: 4 VLRRPFSATLLQSPPKLKLPPYKPGNNVG-----SPRNMGPLASFTSNPRSANSFPPPEW 58
+L R F+ + + + PP P + G SP + + T SF
Sbjct: 26 LLHRVFTCSRYLTARFMSTPP--PDDMFGFDDPFSPSDSREVVDLTKE----YSFLHDSL 79
Query: 59 VEPFNDVSDLVSCPQNLNPSPWVRQILNLLDGSSDMEA-NLDSFCRKFLIKLSPNFVSFV 117
V+ + +V+ P S R I + + G D+ F R+F KLS + V V
Sbjct: 80 VD-YGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEV 138
Query: 118 LRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKG 177
LR + RP+ + F WA RQ Y H Y +L+D + D ++++
Sbjct: 139 LR---LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD 195
Query: 178 FLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSE 237
+ N L++ G L +K+ PS TYN L+ + + ++S+
Sbjct: 196 KEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255
Query: 238 LVFKVMENG-----------------KVG---------------PDVVTYNTMIKGYCKV 265
L+ + M KVG PD V Y +I G C+
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA 315
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
++AM+ M A + P+ +TY TL+ C + C + + M +G +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDS------------------- 366
N ++ C G + + + M++ G P +Y LI S
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 367 YAKL----------------------GSMNEAINIFERMKYEGVEPDEVTYGVIISGLCK 404
Y+++ G +A ++ M +G PD TY +++ LC
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 405 NERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYC 464
++E A FE + G+ + Y+ ++D KAG +++A + F EM E GC +
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 465 YNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMI 524
Y LI A K K+ A LF+ M EGC + TY+ LI+G K + E+A ++++ M
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 525 ----------------DKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIP-ET 567
D P ++ AL G C S +V A K+LD ++ +G P +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 568 AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRT--ALINALRKAGNADLAIKLM 624
++ +I LCK G++ EA ++ + E P + T +LI+ K DLA K++
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEM--SEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 202/460 (43%), Gaps = 55/460 (11%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y ++D G +++ R FNE++E G V +LI ++ V ++ +M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESS----------------ELVFKVMENGKVGPDVV 253
G P++ TY+ L++G + +E + ++ FK ++ P+VV
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 254 TYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM 313
TY ++ G+CK + ++A + AM +P++I Y LI G D + EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 314 DEKGIEIPSHAY------------------------------NLVI-----GGLCKVGKC 338
E G + Y N+VI GLCKVGK
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 339 IEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVI 398
E + + + M +GCQPNV YTA+ID + +G + + + ERM +GV P+ VTY V+
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 399 ISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGC 458
I CKN L+ A E + + Y +I+G K E+ L +E+ +
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDT 878
Query: 459 PRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVY--TYTILINGMFKEHRNEEA 516
Y +LID L K +L+ AL L + + Y TY LI + ++ E A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 517 LKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILD 556
+L+ M KG+ P SF +L GL + K++ A +LD
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 204/492 (41%), Gaps = 21/492 (4%)
Query: 152 SLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKEN 211
S CL G ++ V E+ +GF+ S + ++ +E ++ MK
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 212 GIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKA 271
G+ +YTY +++ + IE + F M P+VVTY +I Y K K A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 272 MEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM----------------DE 315
E F M + P+ +TY LI G + ++ M D+
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
Y ++ G CK + E + ++M GC+PN +Y ALID K+G ++E
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
A + M G TY +I K +R + A + N A N + Y+ +ID
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
GL K G+ DEA +L + M EKGC + Y +ID GK++ L L +RM +G
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
TY +LI+ K + A L + M A +R + G + + + +L
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG--FNKEFIESLGLL 870
Query: 556 DELAPKGIIP-ETAFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRT--ALINALR 612
DE+ P + + +I L K R++ A +L + + + T +LI +L
Sbjct: 871 DEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLC 930
Query: 613 KAGNADLAIKLM 624
A + A +L
Sbjct: 931 LANKVETAFQLF 942
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 167/351 (47%), Gaps = 6/351 (1%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
N+ Y +L+D V+ R + + + +G ++LI +G ++E V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIE-SSELVFKVMENGKVGPDVVTYNTMIKGYCK 264
M E+G +LYTY+ L++ + +S+++ K++EN P+VV Y MI G CK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLCK 756
Query: 265 VGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHA 324
VGKT +A + + ME + QP+ +TY +I + G ++CL L M KG+
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 325 YNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMK 384
Y ++I CK G H + E M + + A Y +I+ + K E++ + + +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874
Query: 385 YEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV--NAMFYSSLIDGLGKAGR 442
+ P Y ++I L K +RLE A++ E + + Y+SLI+ L A +
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGC 493
V+ A +LF EM +KG + + LI L + K+ EAL L + C
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 160/372 (43%), Gaps = 29/372 (7%)
Query: 111 PNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKY--SHNLE-------------------C 149
P+ + + D S+RPNV T+ A + SH +E
Sbjct: 621 PDVDMYFKQYDDNSERPNV----VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +LID L G +D + V E+ E GF T+ +SLI + + + V M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
EN P++ Y +++GL + + + ++ME P+VVTY MI G+ +GK +
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
+E M ++ V P+ +TY LI C G D +L EM + + Y VI
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERM-KYEGV 388
G K + IE + + + + P +++Y LID+ K + A+ + E + +
Sbjct: 857 EGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 389 EPD-EVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
D TY +I LC ++E A Q F GV + SLI GL + ++ EA
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 448 ELFEEMVEKGCP 459
L + + CP
Sbjct: 975 LLLDFISHMVCP 986
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 165/388 (42%), Gaps = 20/388 (5%)
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGD-FDSCLSLYHEMD 314
N +++ +C+ G A+E+ ++ +P + TY LIQA +L+ D DS ++ EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA-FLKADRLDSASLIHREMS 262
Query: 315 EKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMN 374
+ + LCKVGK E + E+ P+ YT LI +
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFE 319
Query: 375 EAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLI 434
EA++ RM+ P+ VTY ++ G ++L + G + ++SL+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 435 DGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALA------KCGKLDEALALFKRM 488
+G A +L ++MV+ G YN+LI ++ C LD A + M
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 489 EDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKV 548
G + + + E+A + MI +G P +++ + LC + K+
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 549 ARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREI---PGKIR 604
A + +E+ G++ + + M+ CK G I++A K + + RE+ P +
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM----REVGCTPNVVT 555
Query: 605 -TALINALRKAGNADLAIKLMHSKIGVG 631
TALI+A KA A +L + + G
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEG 583
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 212/435 (48%), Gaps = 17/435 (3%)
Query: 186 NSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMEN 245
N L+ + L + ++ + + M+ GI LYT+N ++N + + + M
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 246 GKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDS 305
PD VT +++ G+C+ + A+ M +PD + Y +I + +
Sbjct: 149 LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 306 CLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALID 365
+ E++ KGI Y ++ GLC + + + MI++ PNV Y+AL+D
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 366 SYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV 425
++ K G + EA +FE M ++PD VTY +I+GLC ++R++EA Q F+ + G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 426 NAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF 485
+ + Y++LI+G KA RV++ +LF EM ++G ++ YN LI + G +D+A F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 486 KRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
+M+ G ++TY IL+ G+ E+AL +++ M + + ++ + G+C +
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 546 GKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGRIKEA----------------CKL 588
GKV A + L+ KG+ P+ + M++ LC G + E C L
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Query: 589 ADGIVDREREIPGKI 603
+DG + E+ K+
Sbjct: 509 SDGDITLSAELIKKM 523
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 188/389 (48%), Gaps = 1/389 (0%)
Query: 239 VFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACY 298
+F M + P +V +N ++ K+ K + + ME ++ D T+ +I
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 299 LEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVA 358
LS+ +M + G E ++ G C+ + + ++ + M+ G +P++
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 359 IYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFC 418
Y A+IDS K +N+A + F+ ++ +G+ P+ VTY +++GLC + R +A +
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 419 RANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKL 478
+ N + YS+L+D K G+V EA+ELFEEMV D Y+ LI+ L ++
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 479 DEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRAL 538
DEA +F M +GC V +Y LING K R E+ +KL+ M +G+ ++ L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 539 SIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDRER 597
G +G V +A + ++ GI P+ + ++ LC G +++A + + + RE
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 598 EIPGKIRTALINALRKAGNADLAIKLMHS 626
++ T +I + K G + A L S
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 182/410 (44%), Gaps = 42/410 (10%)
Query: 118 LRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKG 177
L+ +DV ++G ++ R Y+ N+ +I+C C V + ++ + G
Sbjct: 98 LKKYDVV--ISLGKKMEVLGIRNDLYTFNI-----VINCFCCCFQVSLALSILGKMLKLG 150
Query: 178 FLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSE 237
+ SL+ F V + + + M E G +P + YN +++ L + + +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 238 LVFKVMENGKVGPDVVTYNTMIKGYC---------------------------------- 263
FK +E + P+VVTY ++ G C
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 264 -KVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
K GK +A E F M ++ PD +TY +LI L D ++ M KG
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
+YN +I G CK + +G +F M +RG N Y LI + + G +++A F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M + G+ PD TY +++ GLC N LE+A+ FE + + ++ + Y+++I G+ K G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 443 VDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG 492
V+EA LF + KG D Y ++ L G L E AL+ +M+ EG
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 162/320 (50%), Gaps = 1/320 (0%)
Query: 267 KTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYN 326
K A++ F M P + + L+ A +D +SL +M+ GI + +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 327 LVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYE 386
+VI C + +I M++ G +P+ +L++ + + +++A+++ ++M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 387 GVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEA 446
G +PD V Y II LCK +R+ +A +F+ G+ N + Y++L++GL + R +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 447 EELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILING 506
L +M++K + Y+ L+DA K GK+ EA LF+ M D + TY+ LING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 507 MFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE 566
+ R +EA +++D+M+ KG S+ L G C + +V K+ E++ +G++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 567 T-AFEDMITCLCKTGRIKEA 585
T + +I + G + +A
Sbjct: 365 TVTYNTLIQGFFQAGDVDKA 384
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 209/422 (49%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
+ ++ +A D V ++++++ G + + LI F + L + M
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
+ G PS+ T L+NG + + + M+ P+VV YNT+I G CK
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A+E F ME + ++ D +TY TLI G + L +M ++ I+ + +I
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
K G +E +++ MIRR PNV Y +LI+ + G + +A +F+ M +G
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
PD VTY +I+G CK++R+E+ M+ F G+ +A Y++LI G +AG+++ A+++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
F MV+ G D YN+L+D L GK+++AL + + ++ D + TY I+I G+ +
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 510 EHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAF 569
+ +EA L+ + KG+ P A ++ + GLC G A K+ + G +P
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 570 ED 571
D
Sbjct: 502 YD 503
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 251/523 (47%), Gaps = 20/523 (3%)
Query: 107 IKLSPNFVSFVLRNHDVSKR---PNVGL-RLFTWAARQKKYSHNLECYISLIDCLALCGD 162
I S + FV R++ + +R P L R F+ A+ Y L + C
Sbjct: 7 IAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELH-------CIK 59
Query: 163 VDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNF 222
D +F E+ + + ++ ++ + + +++++ M+ GI LY++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L++ + + + M P +VT +++ G+C+ + Q+A+ +M+
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
P+ + Y T+I D ++ L +++ M++KGI + YN +I GL G+ +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
+ M++R PNV +TALID++ K G++ EA N+++ M V P+ TY +I+G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
C + L +A F+ + G + + Y++LI G K+ RV++ +LF EM +G D+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
+ YN LI + GKL+ A +F RM D G + TY IL++ + + E+AL + +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGR 581
+ + ++ + GLC + K+ A + L KG+ P+ A+ MI+ LC+ G
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 582 IKEACKLA-----DGIVDREREIPGKIR---TALINALRKAGN 616
+EA KL DG + ER +R T+L L KA +
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAAH 522
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 199/432 (46%), Gaps = 1/432 (0%)
Query: 101 FCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQK-KYSHNLECYISLIDCLAL 159
FC + P+ V F ++K + ++ + + SH+L + LI C
Sbjct: 67 FCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCR 126
Query: 160 CGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYT 219
C + + ++ + GF ++ SL+ F +E + + SM G P++
Sbjct: 127 CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 186
Query: 220 YNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAME 279
YN ++NGL + + ++ VF ME + D VTYNT+I G G+ A R M
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 280 ARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCI 339
R + P+ I + LI EG+ +LY EM + + YN +I G C G
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 340 EGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVII 399
+ +F+ M+ +GC P+V Y LI + K + + + +F M Y+G+ D TY +I
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 400 SGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCP 459
G C+ +L A + F GV+ + + Y+ L+D L G++++A + E++ +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 460 RDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKL 519
D YN++I L + KL EA LF+ + +G Y +I+G+ ++ EA KL
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 520 WDMMIDKGITPT 531
M + G P+
Sbjct: 487 CRRMKEDGFMPS 498
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 218/461 (47%), Gaps = 37/461 (8%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
SHNL Y LI+C + + ++ + G+ ++ +SL+ + + + +
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 204 VWRSMKENGIEPSLYTYNFLMNGL-VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGY 262
+ M E G P T+ L++GL +++ E+ LV ++++ G P++VTY ++ G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGL 235
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPS 322
CK G A MEA ++ + + Y T+I + D L+L+ EM+ KG+
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 323 HAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFER 382
Y+ +I LC + + + MI R PNV + ALID++ K G + EA +++
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 383 MKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGR 442
M ++PD TY +I+G C ++RL+EA FE + N + Y++LI+G KA R
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 443 VDEAEELFEEMVEKGC----------------PRDS-------------------YCYNV 467
+DE ELF EM ++G RD YN
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
L+D L K GKL++A+ +F+ ++ + T+YTY I+I GM K + E+ L+ + KG
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETA 568
+ P + + G C G A + ++ G +P++
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 203/440 (46%), Gaps = 38/440 (8%)
Query: 186 NSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESS-ELVFKVME 244
N L+ + + + ++ + M+ GI +LYTYN L+N I + L+ K+M+
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 245 NGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFD 304
G P +VT ++++ GYC + A+ M +PD IT+ TLI +L
Sbjct: 149 LG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 305 SCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALI 364
++L M ++G + Y +V+ GLCK G + M + NV IY+ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 365 DSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFE-----FCR 419
DS K ++A+N+F M+ +GV P+ +TY +IS LC ER +A +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 420 ANGVAVNAMF------------------------------YSSLIDGLGKAGRVDEAEEL 449
N V NA+ YSSLI+G R+DEA+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
FE M+ K C + YN LI+ K ++DE + LF+ M G TYT LI+G F+
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 510 EHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-A 568
+ A ++ M+ G+ P ++ L GLC +GK+ +A + + L + P
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 569 FEDMITCLCKTGRIKEACKL 588
+ MI +CK G++++ L
Sbjct: 508 YNIMIEGMCKAGKVEDGWDL 527
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 185/354 (52%), Gaps = 2/354 (0%)
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
Q+ NL Y +++ L GD+D + N+++ V +++I S +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVN-SMFIESSELVFKVMENGKVGPDVVTYNTM 258
+ L ++ M+ G+ P++ TY+ L++ L N + ++S L+ ++E K+ P+VVT+N +
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNAL 336
Query: 259 IKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGI 318
I + K GK +A + + M R++ PD TY +LI + D ++ M K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 319 EIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAIN 378
YN +I G CK + EG +F M +RG N YT LI + + + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 379 IFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLG 438
+F++M +GV P+ +TY ++ GLCKN +LE+AM FE+ + + + Y+ +I+G+
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 439 KAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG 492
KAG+V++ +LF + KG D YN +I + G +EA ALF++M ++G
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 181/385 (47%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
+ +LI L L + + + ++G + ++ G ++ + M+
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
IE ++ Y+ +++ L + + +F MEN V P+V+TY+++I C +
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A M R + P+ +T+ LI A EG LY EM ++ I+ Y+ +I
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
G C + E +FE MI + C PNV Y LI+ + K ++E + +F M G+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
+ VTY +I G + + A F+ ++GV N M Y++L+DGL K G++++A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
FE + Y YN++I+ + K GK+++ LF + +G V Y +I+G +
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 510 EHRNEEALKLWDMMIDKGITPTAAS 534
+ EEA L+ M + G P + +
Sbjct: 553 KGLKEEADALFRKMREDGPLPDSGT 577
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 179/408 (43%), Gaps = 5/408 (1%)
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L NGL +SM ++ + +F M + P + +N ++ K+ K + M+
Sbjct: 57 LRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
+ + TY LI L+L +M + G E + ++ G C + +
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
A+ + M+ G +P+ +T LI +EA+ + +RM G +P+ VTYGV+++GL
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
CK ++ A A + N + YS++ID L K D+A LF EM KG +
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
Y+ LI L + +A L M + + V T+ LI+ KE + EA KL+D
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTGR 581
MI + I P ++ +L G C+ ++ A + + + K P + +I CK R
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 582 IKEACKLADGIVDREREIPGKIRTALINAL---RKAGNADLAIKLMHS 626
I E +L + R T LI+ R NA + K M S
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 1/370 (0%)
Query: 255 YNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMD 314
Y +++ K A+ F M P + L+ A FD +SL +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 315 EKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMN 374
GI + YN++I C+ + A+ M++ G +P++ ++L++ Y ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 375 EAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLI 434
+A+ + ++M G PD +T+ +I GL + + EA+ + G N + Y ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 435 DGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCD 494
+GL K G +D A L +M + Y+ +ID+L K D+AL LF ME++G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 495 QTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKI 554
V TY+ LI+ + R +A +L MI++ I P +F AL GK+ A K+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 555 LDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRK 613
DE+ + I P+ + +I C R+ EA + + ++ ++ LIN K
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 614 AGNADLAIKL 623
A D ++L
Sbjct: 413 AKRIDEGVEL 422
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 36/300 (12%)
Query: 130 GLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLI 189
L LFT K N+ Y SLI CL + +++ E+ V N+LI
Sbjct: 279 ALNLFT-EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 190 KSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVG 249
+F G + E ++ M + I+P ++TY+ L+NG ++ ++ +F++M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 250 PDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSL 309
P+VVTYNT+I G+CK + + +E FR M R + + +TY TLI + D D+ +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 310 YHEMDEKGI-----------------------------------EIPSHAYNLVIGGLCK 334
+ +M G+ E + YN++I G+CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 335 VGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVT 394
GK +G +F S+ +G +P+V IY +I + + G EA +F +M+ +G PD T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 209/438 (47%), Gaps = 1/438 (0%)
Query: 94 MEANLDSFCRKFLIKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQK-KYSHNLECYIS 152
++ +LD F + P+ F +SK + ++ W Q HNL
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 153 LIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENG 212
L++C C + ++ + G ++ SL+ F V + L+++ M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 213 IEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAM 272
+P++ YN +++GL S ++++ + ME +GPDVVTYN++I G C G+ A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 273 EKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGL 332
M R + PD T+ LI AC EG Y EM + ++ Y+L+I GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 333 CKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDE 392
C + E +F M+ +GC P+V Y+ LI+ Y K + + +F M GV +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 393 VTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEE 452
VTY ++I G C+ +L A + F GV N + Y+ L+ GL G++++A + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 453 MVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHR 512
M + G D YN++I + K G++ +A ++ + +G ++TYT ++ G++K+
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 513 NEEALKLWDMMIDKGITP 530
EA L+ M + GI P
Sbjct: 482 RREADALFRKMKEDGILP 499
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 179/365 (49%), Gaps = 4/365 (1%)
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L NG+ +S +L F +++ + P + ++ ++ K+ K + + M+
Sbjct: 53 LRNGIRFMKLDDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 283 VQPDKITYMTLIQACYLE-GDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEG 341
+ P + ++ C+ LS +M + G E + ++ G C+ + +
Sbjct: 112 I-PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 342 HAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISG 401
+F+ M+ G +PNV IY +ID K ++ A+++ RM+ +G+ PD VTY +ISG
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 402 LCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRD 461
LC + R +A + + + +++LID K GRV EAEE +EEM+ + D
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 462 SYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWD 521
Y++LI L +LDEA +F M +GC V TY+ILING K + E +KL+
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 522 MMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPE-TAFEDMITCLCKTG 580
M +G+ ++ L G C +GK+ A +I + G+ P + ++ LC G
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 581 RIKEA 585
+I++A
Sbjct: 411 KIEKA 415
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 212/479 (44%), Gaps = 87/479 (18%)
Query: 164 DRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFL 223
D + L F+ ++ + L +++ + L+ + + + ++++W M+ GI +L T N L
Sbjct: 64 DSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 224 MNGLVNSMFIESSELVFKVMENGKV-----GPDVVTYNTMIKGYCKVGKTQKAMEKFRAM 278
+N F S+L + GK+ P +VT+ +++ G+C+ + A+ F M
Sbjct: 123 LN-----CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 279 EARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCK---- 334
+P+ + Y N +I GLCK
Sbjct: 178 VGMGYKPNVVIY-----------------------------------NTIIDGLCKSKQV 202
Query: 335 --------------------------VGKCIEGH-----AIFESMIRRGCQPNVAIYTAL 363
G C G + M +R P+V + AL
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 364 IDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGV 423
ID+ K G ++EA +E M ++PD VTY ++I GLC RL+EA + F F + G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 424 AVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALA 483
+ + YS LI+G K+ +V+ +LF EM ++G R++ Y +LI + GKL+ A
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 484 LFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLC 543
+F+RM G + TY +L++G+ + E+AL + M G+ ++ + G+C
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 544 LSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKL-----ADGIVDRE 596
+G+VA A I L +G++P+ + M+ L K G +EA L DGI+ E
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 163/332 (49%), Gaps = 1/332 (0%)
Query: 255 YNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMD 314
Y M++ + K +++ F M P + L+ A +D + L+ +M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 315 EKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMN 374
GI N+++ C+ + + MI+ G +P++ + +L++ + + +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 375 EAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLI 434
+A+ +F++M G +P+ V Y II GLCK+++++ A+ +G+ + + Y+SLI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 435 DGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCD 494
GL +GR +A + M ++ D + +N LIDA K G++ EA ++ M D
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 495 QTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKI 554
+ TY++LI G+ R +EA +++ M+ KG P ++ L G C S KV K+
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 555 LDELAPKGIIPET-AFEDMITCLCKTGRIKEA 585
E++ +G++ T + +I C+ G++ A
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 182 VSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFK 241
V N+LI + G V E + M ++P + TY+ L+ GL ++ +E +F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 242 VMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEG 301
M + PDVVTY+ +I GYCK K + M+ F M R V + +TY LIQ
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ------ 369
Query: 302 DFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYT 361
G C+ GK IF M+ G PN+ Y
Sbjct: 370 -----------------------------GYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 362 ALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRAN 421
L+ G + +A+ I M+ G++ D VTY +II G+CK + +A +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 422 GVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGC-PRDSY 463
G+ + Y++++ GL K G EA+ LF +M E G P + Y
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECY 503
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 430 YSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRME 489
+S L+ + K + D L+E+M G P + N+L++ +C +L AL+ +M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 490 DEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVA 549
G + ++ T+ L+NG + R +AL ++D M+ G P + + GLC S +V
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 550 RACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALI 608
A +L+ + GI P+ + +I+ LC +GR +A ++ + RE ALI
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 609 NALRKAGNADLA 620
+A K G A
Sbjct: 264 DACVKEGRVSEA 275
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 212/438 (48%), Gaps = 11/438 (2%)
Query: 130 GLRLFTWAARQKKYSHNLECYISLIDC-----LALCGDVDRVRLVFNELKEKGFLMTVSA 184
GLR+F + ++ C + L+ + LC ++ F + + G +TV +
Sbjct: 173 GLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEI------FRRMVDSGVKITVYS 226
Query: 185 ANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVME 244
+++ G VE+ + + GI+P YTYN ++N V E V KVM+
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 245 NGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFD 304
V + VTY +++ K GK A + F M R ++ D Y +LI +G+
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 305 SCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALI 364
L+ E+ EKG+ S+ Y +I G+CKVG+ + M +G ++ LI
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 365 DSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVA 424
D Y + G ++EA I++ M+ +G + D T I S + +R +EA Q+ GV
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 425 VNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALAL 484
++ + Y++LID K G V+EA+ LF EM KG ++ YNV+I A K GK+ EA L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 485 FKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCL 544
ME G D YTYT LI+G +EA++L+ M KG+ + ++ + GL
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 545 SGKVARACKILDELAPKG 562
+GK A + DE+ KG
Sbjct: 587 AGKSDEAFGLYDEMKRKG 604
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 193/412 (46%), Gaps = 1/412 (0%)
Query: 202 LWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKG 261
L ++R M ++G++ ++Y+ ++ GL +E S+ + K + P+ TYNT+I
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 262 YCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIP 321
Y K + M+ V +K+TY L++ G L+ EM E+GIE
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 322 SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFE 381
H Y +I C+ G +F+ + +G P+ Y ALID K+G M A +
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 382 RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAG 441
M+ +GV +V + +I G C+ ++EA ++ G + +++ +
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 442 RVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYT 501
R DEA++ M+E G + Y LID K G ++EA LF M +G TY
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPK 561
++I K+ + +EA KL M G+ P + ++ +L G C++ V A ++ E+ K
Sbjct: 509 VMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 562 GIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALR 612
G+ + + MI+ L K G+ EA L D + + I K+ TALI ++
Sbjct: 569 GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 204/438 (46%), Gaps = 1/438 (0%)
Query: 196 GMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTY 255
GM EE L V+ M + G+ + + I+ +F+ M + V V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 256 NTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDE 315
+++G C+ G+ +K+ + + + ++P+ TY T+I A + DF + M +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 316 KGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNE 375
G+ Y L++ K GK + +F+ M RG + +V +YT+LI + G+M
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 376 AINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLID 435
A +F+ + +G+ P TYG +I G+CK + A ++ GV + + +++LID
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 436 GLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
G + G VDEA +++ M +KG D + N + + + DEA RM + G
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
+ +YT LI+ KE EEA +L+ M KG+ P A ++ + C GK+ A K+
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 556 DELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKA 614
+ G+ P++ + +I C + EA +L + + + T +I+ L KA
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 615 GNADLAIKLMHSKIGVGY 632
G +D A L GY
Sbjct: 588 GKSDEAFGLYDEMKRKGY 605
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 178/390 (45%), Gaps = 35/390 (8%)
Query: 153 LIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENG 212
+++ L G+V++ + + E KG N++I ++ + V + MK++G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 213 IEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAM 272
+ + TY LM V + + +E +F M + DV Y ++I C+ G ++A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 273 EKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGL 332
F + + + P TY LI G+ + L +EM KG+ I +N +I G
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 333 CKVGKCIEGHAIFESMIRRGCQPNV----------------------------------- 357
C+ G E I++ M ++G Q +V
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 358 AIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEF 417
YT LID Y K G++ EA +F M +GV+P+ +TY V+I CK +++EA +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 418 CRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGK 477
ANG+ ++ Y+SLI G A VDEA LF EM KG ++S Y V+I L+K GK
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 478 LDEALALFKRMEDEGCDQTVYTYTILINGM 507
DEA L+ M+ +G YT LI M
Sbjct: 590 SDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 169/353 (47%)
Query: 120 NHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFL 179
N V +R G+ ++ +N Y L++ G + +F+E++E+G
Sbjct: 267 NAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE 326
Query: 180 MTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELV 239
V SLI G ++ ++ + E G+ PS YTY L++G+ + ++E++
Sbjct: 327 SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEIL 386
Query: 240 FKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYL 299
M++ V V +NT+I GYC+ G +A + ME + Q D T T+
Sbjct: 387 MNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Query: 300 EGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAI 359
+D M E G+++ + +Y +I CK G E +F M +G QPN
Sbjct: 447 LKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 360 YTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCR 419
Y +I +Y K G + EA + M+ G++PD TY +I G C + ++EAM+ F
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 420 ANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDAL 472
G+ N++ Y+ +I GL KAG+ DEA L++EM KG D+ Y LI ++
Sbjct: 567 LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 189/410 (46%), Gaps = 38/410 (9%)
Query: 262 YCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIP 321
Y G ++ + F M + + D+ + + + A D CL ++ M + G++I
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 322 SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFE 381
++ +V+ GLC+ G+ + + + +G +P Y +I++Y K + + +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 382 RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAG 441
MK +GV ++VTY +++ KN ++ +A + F+ R G+ + Y+SLI + G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 442 RVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYT 501
+ A LF+E+ EKG SY Y LID + K G++ A L M+ +G + T +
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITP------TAAS---------------FRALSI 540
LI+G ++ +EA ++D+M KG T AS FR +
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 541 GL--------------CLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEA 585
G+ C G V A ++ E++ KG+ P + MI CK G+IKEA
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 586 CKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGV-GYDR 634
KL + + T+LI+ A N D A++L S++G+ G D+
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF-SEMGLKGLDQ 572
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 231/497 (46%), Gaps = 11/497 (2%)
Query: 146 NLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVW 205
N+ Y +LI V E+KE+G + NSLI ++E
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 206 RSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKV 265
M ENG++P+ +TY ++G + + S++ K M V P+ V +I YCK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 266 GKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAY 325
GK +A +R+M + + D TY L+ + D ++ EM KGI +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 326 NLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKY 385
++I G K+G + +IF+ M+ G PNV IY L+ + + G + +A + + M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 386 EGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDE 445
+G+ P+ VTY II G CK+ L EA + F+ + G+ ++ Y++L+DG + V+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 446 AEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ----TVYTYT 501
A +F +KGC + +N LI+ + K GK + + R+ D D+ TY
Sbjct: 751 AITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 502 ILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPK 561
I+I+ + KE E A +L+ M + + PT ++ +L G G+ A + DE
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 562 GIIPE-TAFEDMITCLCKTGRIKEACKLADGI-----VDREREIPGKIRTALINALRKAG 615
GI P+ + +I K G +A L D + VD ++ AL++ K G
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 616 NADLAIKLMHSKIGVGY 632
++A K+M + + + Y
Sbjct: 930 EMEVAEKVMENMVRLQY 946
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 225/497 (45%), Gaps = 20/497 (4%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y LID L + D + + +E+ G + + I G++E+ ++ M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 210 ENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQ 269
+G+ P Y L+ G + + M+ + TY T++KG C G
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 270 KAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVI 329
A + M A +P+ + Y TLI+ F + + EM E+GI YN +I
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 330 GGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVE 389
GL K + E + M+ G +PN Y A I Y + A + M+ GV
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 390 PDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEEL 449
P++V +I+ CK ++ EA + G+ +A Y+ L++GL K +VD+AEE+
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 450 FEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFK 509
F EM KG D + Y VLI+ +K G + +A ++F M +EG V Y +L+ G +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 510 EHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAF 569
E+A +L D M KG+ P A ++ + G C SG +A A ++ DE+ KG++P++
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS-- 732
Query: 570 EDMITCLCKTGRIKEACKLADGIVDREREIPGKIR----------TALINALRKAGNADL 619
T + C+L D V+R I G + ALIN + K G +L
Sbjct: 733 ------FVYTTLVDGCCRLND--VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 620 AIKLMHSKIGVGYDRMG 636
++++ + +DR G
Sbjct: 785 KTEVLNRLMDGSFDRFG 801
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 201/417 (48%), Gaps = 1/417 (0%)
Query: 208 MKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGK 267
M G+ +TY+ L++GL+ ++++ + M + + Y+ I K G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 268 TQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNL 327
+KA F M A + P Y +LI+ E + L EM ++ I I + Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 328 VIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEG 387
V+ G+C G + I + MI GC+PNV IYT LI ++ + +A+ + + MK +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 388 VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
+ PD Y +I GL K +R++EA + NG+ NA Y + I G +A A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 448 ELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGM 507
+ +EM E G + LI+ K GK+ EA + ++ M D+G TYT+L+NG+
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 508 FKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET 567
FK + ++A +++ M KGI P S+ L G G + +A I DE+ +G+ P
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 568 AFEDMIT-CLCKTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKL 623
+M+ C++G I++A +L D + + +I+ K+G+ A +L
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 184/417 (44%), Gaps = 43/417 (10%)
Query: 172 ELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSM 231
E++E G L LI + G V E +RSM + GI TY LMNGL +
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 232 FIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYM 291
++ +E +F+ M + PDV +Y +I G+ K+G QKA F M + P+ I Y
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 292 TLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRR 351
L+ G+ + L EM KG+ + Y +I G CK G E +F+ M +
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 352 GCQPNVAIYTALIDSYAKLGSMNEAINIF--------------------------ERMKY 385
G P+ +YT L+D +L + AI IF +K
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 386 EGV------------EPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSL 433
E + +P++VTY ++I LCK LE A + F + + + Y+SL
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 434 IDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRM----- 488
++G K GR E +F+E + G D Y+V+I+A K G +AL L +M
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 489 EDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
D+GC ++ T L++G K E A K+ + M+ P +A+ L C+S
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/569 (24%), Positives = 242/569 (42%), Gaps = 48/569 (8%)
Query: 107 IKLSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALC--GDVD 164
I+++P V VLR+ V P+ L F W QK L+ + L L LC G +
Sbjct: 58 IEINPEVVLSVLRSKRVDD-PSKLLSFFNWVDSQKVTEQKLDSFSFL--ALDLCNFGSFE 114
Query: 165 RVRLVFNELKEKGFLMTVSAANSLIKS-------------FGGL-------GMVEELLWV 204
+ V + E+ + + +S+++ FG L G +EE ++V
Sbjct: 115 KALSVVERMIERNWPVA-EVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173
Query: 205 WRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCK 264
+ S + P L L++ L+ ++ V+K M V DV TY+ +I +C+
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233
Query: 265 VGKTQ-------KAMEKFR--------------AMEARNVQPDKITYMTLIQACYLEGDF 303
G Q K ++FR +M + + P K TY LI
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 304 DSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTAL 363
+ SL EMD G+ + +H Y+L+I GL K + M+ G +Y
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 364 IDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGV 423
I +K G M +A +F+ M G+ P Y +I G C+ + + + + + +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 424 AVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALA 483
++ Y +++ G+ +G +D A + +EM+ GC + Y LI + + +A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 484 LFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLC 543
+ K M+++G ++ Y LI G+ K R +EA M++ G+ P A ++ A G
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 544 LSGKVARACKILDELAPKGIIPETAF-EDMITCLCKTGRIKEACKLADGIVDREREIPGK 602
+ + A A K + E+ G++P +I CK G++ EAC +VD+ K
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 603 IRTALINALRKAGNADLAIKLMHSKIGVG 631
T L+N L K D A ++ G G
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 230/530 (43%), Gaps = 73/530 (13%)
Query: 141 KKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEE 200
K S ++ + + I+ G V+ +F++++E G V N++I G G +E
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 201 LLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVV------- 253
M E G+EP+L TY+ L+ GL + I + V K M P+V+
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 254 ----------------------------TYNTMIKGYCKVGKTQKAMEKFRAMEA----- 280
TYNT+IKGYCK G+ A + M +
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 281 ------------------------------RNVQPDKITYMTLIQACYLEGDFDSCLSLY 310
RN+ P TLI G L L+
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506
Query: 311 HEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKL 370
+ KG + + N ++ GLC+ GK E I + ++ RGC + Y LI
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566
Query: 371 GSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFY 430
++EA + M G++PD TY ++I GL ++EEA+Q+++ C+ NG+ + Y
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626
Query: 431 SSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMED 490
S +IDG KA R +E +E F+EM+ K ++ YN LI A + G+L AL L + M+
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686
Query: 491 EGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVAR 550
+G TYT LI GM R EEA L++ M +G+ P + AL G G++ +
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746
Query: 551 ACKILDELAPKGIIP-ETAFEDMITCLCKTGRIKEACKLADGIVDREREI 599
+L E+ K + P + + MI + G + EA +L + + RE+ I
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM--REKGI 794
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 216/458 (47%), Gaps = 37/458 (8%)
Query: 202 LWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKG 261
L V+ + G+ PS T N L+ LV + + F V+ G V PDV + T I
Sbjct: 224 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINA 282
Query: 262 YCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIP 321
+CK GK ++A++ F ME V P+ +T+ T+I + G +D +M E+G+E
Sbjct: 283 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 342
Query: 322 SHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFE 381
Y++++ GL + + + + + + M ++G PNV +Y LIDS+ + GS+N+AI I +
Sbjct: 343 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 402
Query: 382 RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNA-------------- 427
M +G+ TY +I G CKN + + A + + + G VN
Sbjct: 403 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 462
Query: 428 MFYS---------------------SLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYN 466
MF S +LI GL K G+ +A EL+ + + KG D+ N
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 467 VLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDK 526
L+ L + GKLDEA + K + GC +Y LI+G + + +EA D M+ +
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 527 GITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEA 585
G+ P ++ L GL KV A + D+ G++P+ + MI CK R +E
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 586 CKLADGIVDREREIPGKIRTALINALRKAGNADLAIKL 623
+ D ++ + + + LI A ++G +A++L
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 224/484 (46%), Gaps = 2/484 (0%)
Query: 109 LSPNFVSFVLRNHDVSKRPNVGLRLFTWAARQKK-YSHNLECYISLIDCLALCGDVDRVR 167
+ P +++ + +++ +G F KK + N+ Y +LID G +++
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 168 LVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGL 227
+ + + KG +T S N+LIK + G + + + M G + ++ ++ L
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 228 VNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDK 287
+ + +S+ M + P T+I G CK GK KA+E + + D
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 288 ITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFES 347
T L+ G D + E+ +G + +YN +I G C K E +
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 348 MIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNER 407
M++RG +P+ Y+ LI + + EAI ++ K G+ PD TY V+I G CK ER
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 408 LEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNV 467
EE ++F+ + V N + Y+ LI ++GR+ A EL E+M KG +S Y
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 468 LIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKG 527
LI ++ +++EA LF+ M EG + V+ YT LI+G K + + L M K
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 528 ITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRIKEAC 586
+ P ++ + G G V A ++L+E+ KGI+P++ +++ I K G + EA
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Query: 587 KLAD 590
K +D
Sbjct: 819 KGSD 822
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 208/480 (43%), Gaps = 39/480 (8%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
VF L KG + + N L+ S ++ + + + G+ P +Y + +N
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 284
Query: 229 NSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKI 288
+E + +F ME V P+VVT+NT+I G G+ +A M R ++P I
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344
Query: 289 TYMTLIQA----------------------------------CYLE-GDFDSCLSLYHEM 313
TY L++ ++E G + + + M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 314 DEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSM 373
KG+ + S YN +I G CK G+ + + M+ G N +T++I
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 374 NEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQ-YFEFCRANGVAVNAMFYSS 432
+ A+ M + P +ISGLCK+ + +A++ +F+F G V+ ++
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN-KGFVVDTRTSNA 523
Query: 433 LIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG 492
L+ GL +AG++DEA + +E++ +GC D YN LI KLDEA M G
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583
Query: 493 CDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARAC 552
YTY+ILI G+F ++ EEA++ WD G+ P ++ + G C + +
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643
Query: 553 KILDELAPKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKIRTALINAL 611
+ DE+ K + P T + +I C++GR+ A +L + + + T+LI +
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 170/357 (47%), Gaps = 19/357 (5%)
Query: 296 ACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVG---KCIEGHAIFESMIRRG 352
CYL L ++ + KG+ N+++ L + KC E + + +G
Sbjct: 219 GCYL------ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV----VCKG 268
Query: 353 CQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAM 412
P+V ++T I+++ K G + EA+ +F +M+ GV P+ VT+ +I GL R +EA
Sbjct: 269 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 328
Query: 413 QYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDAL 472
+ E G+ + YS L+ GL +A R+ +A + +EM +KG P + YN LID+
Sbjct: 329 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 388
Query: 473 AKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTA 532
+ G L++A+ + M +G T TY LI G K + + A +L M+ G
Sbjct: 389 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 448
Query: 533 ASFRALSIGLCLSGKVARACKILDELAPKGIIPETAF-EDMITCLCKTGRIKEACKLADG 591
SF ++ LC A + + E+ + + P +I+ LCK G+ +A +L
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508
Query: 592 IVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYDRMGSIKRRVKFRSLV 648
+++ + + AL++ L +AG D A ++ +G G + RV + +L+
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG-----RGCVMDRVSYNTLI 560
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 103/279 (36%), Gaps = 47/279 (16%)
Query: 160 CGD--VDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSL 217
CG +D + +E+ ++G + LI + VEE + W K NG+ P +
Sbjct: 564 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623
Query: 218 YTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVV------------------------ 253
YTY+ +++G + E + F M + V P+ V
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683
Query: 254 -----------TYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGD 302
TY ++IKG + + ++A F M ++P+ Y LI G
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Query: 303 FDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTA 362
L EM K + Y ++IGG + G E + M +G P+ Y
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803
Query: 363 LIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISG 401
I Y K G + EA ++G DE Y II G
Sbjct: 804 FIYGYLKQGGVLEA--------FKG--SDEENYAAIIEG 832
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 197/412 (47%), Gaps = 15/412 (3%)
Query: 132 RLFTWAARQKKY---------------SHNLECYISLIDCLALCGDVDRVRLVFNELKEK 176
RL T A ++Y SH+L + LI C C + V ++ +
Sbjct: 76 RLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL 135
Query: 177 GFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESS 236
G+ ++ SL+ F + + + + M ++G EP++ YN L++GL + + +
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 237 ELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQA 296
+ ME +G DVVTYNT++ G C G+ A R M R++ PD +T+ LI
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 297 CYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPN 356
+G+ D LY EM + ++ + YN +I GLC G+ + F+ M +GC PN
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 357 VAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFE 416
V Y LI + K ++E + +F+RM EG D TY +I G C+ +L A+ F
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 417 FCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCG 476
+ + V + + + L+ GL G ++ A F++M E YN++I L K
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 477 KLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGI 528
K+++A LF R+ EG TYTI+I G+ K EA +L M ++GI
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 215/436 (49%), Gaps = 15/436 (3%)
Query: 169 VFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLV 228
+F E+ L ++ L+ + L E +++ + M+ GI LY++ L++
Sbjct: 58 LFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH--- 114
Query: 229 NSMFIESSELVFKVMENGKV-----GPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNV 283
F S L F + GK+ P +VT+ +++ G+C V + A M
Sbjct: 115 --CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 284 QPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHA 343
+P+ + Y TLI G+ + L L +EM++KG+ YN ++ GLC G+ +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 344 IFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLC 403
+ M++R P+V +TALID + K G+++EA +++ M V+P+ VTY II+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 404 KNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSY 463
+ RL +A + F+ + G N + Y++LI G K VDE +LF+ M +G D +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 464 CYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMM 523
YN LI + GKL AL +F M + T+ IL++G+ E AL +D M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 524 IDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLCKTGRI 582
+ ++ + GLC + KV +A ++ L +G+ P+ + MI LCK G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 583 KEACKLADGIVDRERE 598
+E AD ++ R +E
Sbjct: 473 RE----ADELIRRMKE 484
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 4/386 (1%)
Query: 188 LIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNG--LVNSMFIESSELVFKVMEN 245
LI F + L V M + G EPS+ T+ L++G LVN + ++ LV ++++
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIG-DAFSLVILMVKS 170
Query: 246 GKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDS 305
G P+VV YNT+I G CK G+ A+E ME + + D +TY TL+ G +
Sbjct: 171 G-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 306 CLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALID 365
+ +M ++ I + +I K G E +++ MI+ PN Y ++I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 366 SYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAV 425
G + +A F+ M +G P+ VTY +ISG CK ++E M+ F+ G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 426 NAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALF 485
+ Y++LI G + G++ A ++F MV + D + +L+ L G+++ AL F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 486 KRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLS 545
M + + Y I+I+G+ K + E+A +L+ + +G+ P A ++ + +GLC +
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 546 GKVARACKILDELAPKGIIPETAFED 571
G A +++ + +GII + ED
Sbjct: 470 GPRREADELIRRMKEEGIICQMNAED 495
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 188/402 (46%), Gaps = 1/402 (0%)
Query: 223 LMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN 282
L G ++S+ E + +F M + + P +V + ++ + + + + + ME
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 283 VQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGH 342
+ D ++ LI LS+ +M + G E + ++ G C V + +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 343 AIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDEVTYGVIISGL 402
++ M++ G +PNV +Y LID K G +N A+ + M+ +G+ D VTY +++GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 403 CKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGCPRDS 462
C + R +A + + + + +++LID K G +DEA+EL++EM++ ++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 463 YCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALKLWDM 522
YN +I+ L G+L +A F M +GC V TY LI+G K +E +KL+
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 523 MIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPETAFE-DMITCLCKTGR 581
M +G ++ L G C GK+ A I + + + P+ ++ LC G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 582 IKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKL 623
I+ A D + + E+ I +I+ L KA + A +L
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 400 SGLCKNERLEEAMQ-YFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAEELFEEMVEKGC 458
+G + R E+A +FE + + + + ++ L+ R + ++M G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLP-SIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102
Query: 459 PRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMFKEHRNEEALK 518
D Y + +LI +C +L AL++ +M G + ++ T+ L++G +R +A
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 519 LWDMMIDKGITPTAASFRALSIGLCLSGKVARACKILDELAPKGIIPET-AFEDMITCLC 577
L +M+ G P + L GLC +G++ A ++L+E+ KG+ + + ++T LC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 578 KTGRIKEACKLADGIVDREREIPGKIRTALINALRKAGNADLAIKLMHSKIGVGYD 633
+GR +A ++ ++ R TALI+ K GN D A +L I D
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 237/471 (50%), Gaps = 18/471 (3%)
Query: 139 RQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMV 198
++ + N+ Y L+ L VD + + E+ KG + ++I S +G+V
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 199 EELLWVWRSMKENGIEPSLYTYNFLMNGLVNSM-FIESSELVFKVMENGKVGPDVVTYNT 257
+E R + E EP + YN L+NGL + + EL+ +++E G + P+V++Y+T
Sbjct: 233 KE----GRELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG-ISPNVISYST 286
Query: 258 MIKGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEK- 316
+I C G+ + A M R P+ T +L++ C+L G L L+++M
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 317 GIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEA 376
G++ AYN ++ G C G ++ ++F M GC PN+ Y +LI+ +AK GS++ A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 377 INIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDG 436
+ I+ +M G P+ V Y ++ LC++ + +EA E A + +++ I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 437 LGKAGRVDEAEELFEEMVEKG-CPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQ 495
L AGR+D AE++F +M ++ CP + YN L+D LAK +++EA L + + G +
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 496 TVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARACKIL 555
+ TY L++G AL+L M+ G +P + + + C GK RA ++L
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 556 DELA--PKGIIPET-AFEDMITCLCKTGRIKEACKLADGIVDREREIPGKI 603
D ++ + P+ ++ ++I LC++ C+ DG++ ER I I
Sbjct: 587 DLVSCGRRKWRPDVISYTNVIWGLCRSN-----CR-EDGVILLERMISAGI 631
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/579 (24%), Positives = 251/579 (43%), Gaps = 93/579 (16%)
Query: 105 FLIKLSPNFVSFVLR-----NHDVSKRPN--------------------VGLRLFTWAAR 139
L+K+ + FVL NH +++ PN + L F A
Sbjct: 9 LLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIAN 68
Query: 140 QKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVE 199
+ H + +I LA+ G VD V+ + ++K +GF + S+I + +G+ E
Sbjct: 69 SNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAE 128
Query: 200 ELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDVVTYNTMI 259
+ ++ +KE G +PS+ YN +++ L+ I+ +V++ M+ P+V TYN ++
Sbjct: 129 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 260 KGYCKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQA-CYL------------------- 299
K CK K A + M + PD ++Y T+I + C +
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV 248
Query: 300 ----------EGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMI 349
E D+ L EM EKGI +Y+ +I LC G+ + M+
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 350 RRGC------------------------------------QPNVAIYTALIDSYAKLGSM 373
+RGC QPNV Y L+ + G++
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 374 NEAINIFERMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSL 433
+A+++F M+ G P+ TYG +I+G K L+ A+ + +G N + Y+++
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 434 IDGLGKAGRVDEAEELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEG- 492
++ L + + EAE L E M ++ C +N I L G+LD A +F++ME +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 493 CDQTVYTYTILINGMFKEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARAC 552
C + TY L++G+ K +R EEA L + +G+ +++++ L G C +G A
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 553 KILDELAPKGIIPETAFEDMIT-CLCKTGRIKEACKLAD 590
+++ ++ G P+ +MI CK G+ + A ++ D
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 169/395 (42%), Gaps = 39/395 (9%)
Query: 150 YISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMK 209
Y +LI+ L D + E+ EKG V + ++LI G +E M
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 210 ENGIEPSLYTYNFLMNG-LVNSMFIESSELVFKVMENGKVGPDVVTYNTMIKGYCKVGKT 268
+ G P++YT + L+ G + ++ +L +++ + P+VV YNT+++G+C G
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 269 QKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLV 328
KA+ F ME P+ TY +LI G D + ++++M G Y +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 329 IGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEG- 387
+ LC+ K E ++ E M + C P+V + A I G ++ A +F +M+ +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 388 VEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGVAVNAMFYSSLIDGLGKAGRVDEAE 447
P+ VTY ++ GL K R+EEA GV ++ Y++L+ G AG A
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 448 ELFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEA-------------------------- 481
+L +M+ G D N++I A K GK + A
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIW 608
Query: 482 -----------LALFKRMEDEGCDQTVYTYTILIN 505
+ L +RM G ++ T+++LIN
Sbjct: 609 GLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 9/312 (2%)
Query: 130 GLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLI 189
L L+ R N+ Y +L+ G++ + VF+ ++E G + SLI
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 190 KSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVG 249
F G ++ +++W M +G P++ Y ++ L + +E + ++M
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 250 PDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARN-VQPDKITYMTLIQACYLEGDFDSCLS 308
P V T+N IKG C G+ A + FR ME ++ P+ +TY L+ +
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 309 LYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMIRRGCQPNVAIYTALIDSYA 368
L E+ +G+E S YN ++ G C G + M+ G P+ +I +Y
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 369 KLGSMNEAINIFE-----RMKYEGVEPDEVTYGVIISGLCKNERLEEAMQYFEFCRANGV 423
K G A + + R K+ PD ++Y +I GLC++ E+ + E + G+
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWR---PDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Query: 424 AVNAMFYSSLID 435
+ +S LI+
Sbjct: 632 VPSIATWSVLIN 643
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 38/262 (14%)
Query: 144 SHNLECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLW 203
S N+ Y SLI+ A G +D ++N++ G V +++++ +E
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 204 VWRSMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMEN-GKVGPDVVTYNTMIKGY 262
+ M + PS+ T+N + GL ++ ++ +E VF+ ME + P++VTYN ++ G
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 263 CKVGKTQKAMEKFRAMEARNVQPDKITYMTLIQACYLEGDFDSCLSLYHEM-------DE 315
K + ++A R + R V+ TY TL+ G L L +M DE
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 316 KGIEIPSHAY------------------------------NLVIGGLCKVGKCIEGHAIF 345
+ + AY VI GLC+ +G +
Sbjct: 564 ITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILL 623
Query: 346 ESMIRRGCQPNVAIYTALIDSY 367
E MI G P++A ++ LI+ +
Sbjct: 624 ERMISAGIVPSIATWSVLINCF 645
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 4/195 (2%)
Query: 111 PNFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVF 170
P F +F+ D + R + ++F +Q + N+ Y L+D LA ++ +
Sbjct: 458 PTFNAFIKGLCD-AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 171 NELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNS 230
E+ +G + S N+L+ G+ L + M +G P T N ++
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 231 MFIESSELVFKVMENG--KVGPDVVTYNTMIKGYCKVGKTQKAMEKFRAMEARNVQPDKI 288
E + + ++ G K PDV++Y +I G C+ + + M + + P
Sbjct: 577 GKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636
Query: 289 TYMTLIQACYLEGDF 303
T+ LI C++ D
Sbjct: 637 TWSVLIN-CFILDDI 650
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,336,228
Number of Sequences: 539616
Number of extensions: 10544623
Number of successful extensions: 38442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 25767
Number of HSP's gapped (non-prelim): 3151
length of query: 650
length of database: 191,569,459
effective HSP length: 124
effective length of query: 526
effective length of database: 124,657,075
effective search space: 65569621450
effective search space used: 65569621450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)