Query 045675
Match_columns 382
No_of_seqs 138 out of 1523
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 07:12:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045675.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045675hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.5 1.9E-12 6.6E-17 118.0 24.3 214 104-338 41-283 (315)
2 3ii7_A Kelch-like protein 7; p 99.5 6.8E-13 2.3E-17 120.4 20.4 216 104-340 51-280 (306)
3 2xn4_A Kelch-like protein 2; s 99.5 1.7E-12 5.8E-17 117.5 22.6 213 105-339 58-283 (302)
4 2woz_A Kelch repeat and BTB do 99.5 2.2E-12 7.5E-17 117.8 23.3 215 103-338 51-293 (318)
5 3ii7_A Kelch-like protein 7; p 99.5 1.1E-12 3.7E-17 119.0 21.1 234 109-362 12-255 (306)
6 1zgk_A Kelch-like ECH-associat 99.5 2.6E-12 8.9E-17 116.8 20.6 214 104-340 66-295 (308)
7 2vpj_A Kelch-like protein 12; 99.5 1.3E-11 4.6E-16 111.5 25.2 212 104-339 58-285 (301)
8 4asc_A Kelch repeat and BTB do 99.5 1E-11 3.4E-16 113.2 22.3 221 122-361 14-250 (315)
9 2vpj_A Kelch-like protein 12; 99.5 1E-11 3.5E-16 112.3 21.7 220 120-363 30-262 (301)
10 2xn4_A Kelch-like protein 2; s 99.5 7.2E-12 2.5E-16 113.4 20.5 223 120-363 29-260 (302)
11 1zgk_A Kelch-like ECH-associat 99.4 5.3E-12 1.8E-16 114.7 19.0 222 120-363 38-271 (308)
12 2woz_A Kelch repeat and BTB do 99.4 6.5E-11 2.2E-15 107.9 23.3 234 108-364 15-263 (318)
13 2uvk_A YJHT; unknown function, 99.4 2.7E-11 9.3E-16 112.3 19.0 242 104-364 15-326 (357)
14 2zwa_A Leucine carboxyl methyl 99.2 1.5E-09 5.2E-14 109.4 21.0 217 107-341 396-644 (695)
15 2uvk_A YJHT; unknown function, 99.2 2.6E-09 8.7E-14 98.9 20.8 223 103-340 60-350 (357)
16 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 2.6E-11 9E-16 79.1 4.0 46 5-50 5-50 (53)
17 2e31_A FBS1, F-box only protei 99.1 7.2E-11 2.5E-15 104.5 5.2 51 6-56 48-99 (297)
18 3v7d_B Cell division control p 99.0 3.4E-06 1.2E-10 80.2 33.4 43 9-51 15-58 (464)
19 1k3i_A Galactose oxidase precu 98.8 3.6E-08 1.2E-12 98.9 15.2 217 108-339 197-504 (656)
20 2ovr_B FBW7, F-BOX/WD repeat p 98.8 3.9E-06 1.3E-10 79.6 28.2 281 7-337 17-313 (445)
21 1p22_A F-BOX/WD-repeat protein 98.7 2.3E-06 7.9E-11 81.0 22.3 45 9-53 11-59 (435)
22 2zwa_A Leucine carboxyl methyl 98.6 6.9E-07 2.4E-11 90.0 16.9 174 177-363 410-616 (695)
23 1k3i_A Galactose oxidase precu 98.5 3E-07 1E-11 92.2 11.0 195 123-338 168-384 (656)
24 3l2o_B F-box only protein 4; s 98.0 1.9E-06 6.5E-11 75.4 2.6 51 8-58 4-54 (312)
25 2ast_B S-phase kinase-associat 97.6 2.6E-05 8.8E-10 71.0 3.3 44 5-48 5-48 (336)
26 2p1m_B Transport inhibitor res 97.0 0.00026 8.8E-09 69.6 3.0 36 7-42 4-40 (594)
27 2z2n_A Virginiamycin B lyase; 96.6 0.16 5.6E-06 44.0 17.9 191 103-336 104-299 (299)
28 3ogk_B Coronatine-insensitive 96.6 0.00078 2.7E-08 66.2 2.5 34 9-42 13-47 (592)
29 1l0q_A Surface layer protein; 96.2 0.44 1.5E-05 43.2 19.1 188 110-338 3-195 (391)
30 1l0q_A Surface layer protein; 96.1 0.73 2.5E-05 41.7 19.8 190 109-337 86-280 (391)
31 3bws_A Protein LP49; two-domai 95.8 0.88 3E-05 41.8 19.2 196 106-338 178-396 (433)
32 3dsm_A Uncharacterized protein 95.7 1 3.6E-05 40.0 23.0 198 108-340 2-221 (328)
33 3ei3_B DNA damage-binding prot 95.5 1.4 4.7E-05 39.8 21.1 184 120-335 95-285 (383)
34 3m0c_C LDL receptor, low-densi 95.3 2.8 9.5E-05 42.5 24.1 175 155-359 475-658 (791)
35 3mbr_X Glutamine cyclotransfer 95.2 1.3 4.4E-05 37.8 17.1 114 208-340 25-142 (243)
36 1npe_A Nidogen, entactin; glyc 95.1 1.4 4.9E-05 37.6 21.4 195 105-340 44-247 (267)
37 4gga_A P55CDC, cell division c 95.0 2.1 7.2E-05 39.3 19.0 195 106-338 114-316 (420)
38 3u4y_A Uncharacterized protein 94.9 1.8 6.3E-05 37.9 19.8 191 106-335 7-210 (331)
39 1rwi_B Serine/threonine-protei 94.8 1.6 5.4E-05 37.0 18.9 192 103-338 29-228 (270)
40 3scy_A Hypothetical bacterial 94.8 2.1 7.1E-05 38.3 24.3 116 211-339 219-346 (361)
41 3nol_A Glutamine cyclotransfer 94.6 1.5 5.2E-05 37.8 15.2 113 209-340 48-164 (262)
42 2qc5_A Streptogramin B lactona 94.5 2.1 7E-05 36.8 18.6 193 103-341 67-268 (300)
43 3g4e_A Regucalcin; six bladed 94.4 2.3 7.9E-05 37.0 21.3 200 107-341 23-239 (297)
44 1nir_A Nitrite reductase; hemo 94.2 4.2 0.00014 39.1 19.9 194 107-338 147-361 (543)
45 2z2n_A Virginiamycin B lyase; 93.8 2.9 9.8E-05 35.8 20.3 192 103-340 20-220 (299)
46 1q7f_A NHL, brain tumor CG1071 93.7 3 0.0001 35.8 24.2 203 106-341 38-247 (286)
47 3v65_B Low-density lipoprotein 93.7 4.1 0.00014 37.2 22.0 210 106-359 125-344 (386)
48 3dsm_A Uncharacterized protein 93.6 3.6 0.00012 36.4 21.8 194 107-336 52-257 (328)
49 3jrp_A Fusion protein of prote 93.6 3.6 0.00012 36.4 20.0 137 179-334 79-242 (379)
50 3jro_A Fusion protein of prote 93.5 2.4 8.3E-05 42.6 16.6 183 120-334 30-240 (753)
51 2iwa_A Glutamine cyclotransfer 93.4 3.5 0.00012 35.6 16.5 110 214-341 32-145 (266)
52 2qc5_A Streptogramin B lactona 93.4 3.4 0.00012 35.3 20.5 191 103-339 25-224 (300)
53 2dg1_A DRP35, lactonase; beta 93.3 4 0.00014 35.8 22.4 208 106-341 53-272 (333)
54 2aq5_A Coronin-1A; WD40 repeat 93.2 4.8 0.00016 36.5 20.8 195 120-339 103-308 (402)
55 3v64_C Agrin; beta propeller, 93.1 4.7 0.00016 36.2 23.5 212 106-358 82-300 (349)
56 3no2_A Uncharacterized protein 93.1 3.9 0.00013 35.3 19.6 177 120-337 14-200 (276)
57 3v65_B Low-density lipoprotein 92.9 5.4 0.00018 36.4 21.0 189 108-338 87-283 (386)
58 1gxr_A ESG1, transducin-like e 92.9 4.4 0.00015 35.2 22.4 193 106-338 60-261 (337)
59 3hfq_A Uncharacterized protein 92.8 3.5 0.00012 36.4 15.1 114 213-338 50-178 (347)
60 3q7m_A Lipoprotein YFGL, BAMB; 92.7 4.1 0.00014 36.6 15.7 109 208-337 48-167 (376)
61 3p5b_L Low density lipoprotein 92.5 6.4 0.00022 36.1 23.6 177 153-359 161-346 (400)
62 1rwi_B Serine/threonine-protei 92.4 4.4 0.00015 34.2 19.8 185 106-334 75-266 (270)
63 2hqs_A Protein TOLB; TOLB, PAL 92.4 6.5 0.00022 36.1 20.3 187 121-341 203-396 (415)
64 3jrp_A Fusion protein of prote 92.3 5.6 0.00019 35.2 18.2 188 120-339 78-295 (379)
65 1gxr_A ESG1, transducin-like e 92.3 5.2 0.00018 34.7 20.0 178 120-338 118-302 (337)
66 3u4y_A Uncharacterized protein 92.3 5.4 0.00018 34.8 17.3 199 105-339 47-259 (331)
67 1ri6_A Putative isomerase YBHE 92.1 5.5 0.00019 34.6 22.9 145 179-339 151-317 (343)
68 3mbr_X Glutamine cyclotransfer 92.0 5.2 0.00018 34.0 19.2 158 152-341 22-189 (243)
69 3q7m_A Lipoprotein YFGL, BAMB; 91.9 4.9 0.00017 36.1 15.2 132 180-338 64-213 (376)
70 3nok_A Glutaminyl cyclase; bet 91.8 5.3 0.00018 34.4 14.1 109 210-340 61-173 (268)
71 3e5z_A Putative gluconolactona 91.7 5.9 0.0002 34.1 23.1 192 120-342 49-256 (296)
72 2ojh_A Uncharacterized protein 91.6 5.5 0.00019 33.6 17.9 185 120-339 21-213 (297)
73 3v64_C Agrin; beta propeller, 91.6 7.3 0.00025 34.9 21.4 187 108-338 44-240 (349)
74 4e54_B DNA damage-binding prot 91.4 2.5 8.4E-05 39.1 12.7 185 120-335 141-330 (435)
75 4gqb_B Methylosome protein 50; 91.3 7.6 0.00026 34.6 18.7 195 108-338 93-295 (344)
76 2pm9_A Protein WEB1, protein t 91.3 7.4 0.00025 35.0 15.8 185 120-334 135-339 (416)
77 4g56_B MGC81050 protein; prote 91.3 7.8 0.00027 34.6 17.1 188 106-333 148-344 (357)
78 1ijq_A LDL receptor, low-densi 90.7 8.2 0.00028 34.0 24.6 214 105-359 38-264 (316)
79 3nol_A Glutamine cyclotransfer 90.7 7.4 0.00025 33.4 16.4 136 179-340 65-210 (262)
80 3dwl_C Actin-related protein 2 90.4 5.1 0.00018 35.7 13.6 182 120-335 32-239 (377)
81 3vgz_A Uncharacterized protein 90.4 8.7 0.0003 33.6 25.6 202 106-337 98-308 (353)
82 3hfq_A Uncharacterized protein 90.1 9.3 0.00032 33.6 24.8 162 153-339 143-326 (347)
83 2hqs_A Protein TOLB; TOLB, PAL 89.8 12 0.0004 34.3 21.6 185 121-339 159-351 (415)
84 3nok_A Glutaminyl cyclase; bet 89.6 9.4 0.00032 32.9 14.4 135 180-341 76-220 (268)
85 4g56_B MGC81050 protein; prote 89.5 11 0.00038 33.6 15.4 194 108-338 105-307 (357)
86 3sjl_D Methylamine dehydrogena 89.5 5.2 0.00018 36.6 12.7 121 212-341 236-373 (386)
87 3bws_A Protein LP49; two-domai 89.2 13 0.00043 33.8 21.7 183 120-331 233-431 (433)
88 1q7f_A NHL, brain tumor CG1071 89.1 9.7 0.00033 32.4 23.0 189 106-332 86-280 (286)
89 3vgz_A Uncharacterized protein 89.0 11 0.00038 32.9 21.4 180 120-337 68-267 (353)
90 1pjx_A Dfpase, DIISOPROPYLFLUO 88.7 11 0.00037 32.4 18.5 194 120-340 45-265 (314)
91 1ri6_A Putative isomerase YBHE 88.7 11 0.00038 32.6 15.5 100 230-339 151-271 (343)
92 4aez_A CDC20, WD repeat-contai 87.6 16 0.00054 33.0 24.4 178 120-337 112-298 (401)
93 1n7d_A LDL receptor, low-densi 87.5 4.5 0.00015 40.4 11.8 136 179-337 475-619 (699)
94 3odt_A Protein DOA1; ubiquitin 87.2 13 0.00045 31.6 18.3 184 108-337 29-219 (313)
95 1ijq_A LDL receptor, low-densi 86.7 16 0.00054 32.1 21.2 176 122-338 11-201 (316)
96 3dm0_A Maltose-binding peripla 86.6 26 0.00088 34.4 19.5 95 230-337 541-637 (694)
97 2dg1_A DRP35, lactonase; beta 86.2 11 0.00037 32.9 12.6 113 212-338 54-177 (333)
98 1yfq_A Cell cycle arrest prote 86.1 16 0.00055 31.6 19.3 180 120-337 78-287 (342)
99 1qks_A Cytochrome CD1 nitrite 85.9 26 0.00089 33.8 21.1 194 108-337 166-378 (567)
100 3fm0_A Protein CIAO1; WDR39,SG 85.9 18 0.00061 31.9 16.9 179 120-330 37-223 (345)
101 3sov_A LRP-6, low-density lipo 85.8 18 0.00061 31.9 22.9 208 108-359 46-264 (318)
102 3m0c_C LDL receptor, low-densi 85.6 33 0.0011 34.7 23.4 108 213-339 482-596 (791)
103 3odt_A Protein DOA1; ubiquitin 85.2 17 0.00056 30.9 20.2 93 230-337 205-301 (313)
104 3o4h_A Acylamino-acid-releasin 84.5 28 0.00097 33.2 15.7 185 109-337 123-319 (582)
105 3e5z_A Putative gluconolactona 84.4 18 0.00063 30.8 18.3 199 103-338 74-292 (296)
106 3k26_A Polycomb protein EED; W 84.3 20 0.00069 31.2 16.8 189 109-334 85-320 (366)
107 2p4o_A Hypothetical protein; p 84.3 17 0.00057 31.6 12.8 105 212-334 41-149 (306)
108 3i2n_A WD repeat-containing pr 84.1 20 0.0007 31.1 17.4 184 120-334 43-245 (357)
109 3zwl_B Eukaryotic translation 84.0 21 0.00071 31.1 21.3 186 120-338 53-255 (369)
110 4e54_B DNA damage-binding prot 84.0 25 0.00086 32.1 17.5 55 280-337 377-435 (435)
111 3vl1_A 26S proteasome regulato 83.9 24 0.00081 31.7 24.2 184 120-340 118-332 (420)
112 4a11_B DNA excision repair pro 83.3 24 0.00082 31.3 17.7 106 213-335 256-368 (408)
113 3dr2_A Exported gluconolactona 83.0 22 0.00075 30.7 19.5 202 111-342 59-277 (305)
114 3p5b_L Low density lipoprotein 83.0 28 0.00094 31.8 21.9 180 122-339 93-284 (400)
115 1r5m_A SIR4-interacting protei 82.8 26 0.00087 31.2 19.8 95 230-338 227-325 (425)
116 2ojh_A Uncharacterized protein 82.7 20 0.00068 29.9 20.1 199 106-339 50-265 (297)
117 3v9f_A Two-component system se 82.2 43 0.0015 33.4 22.4 184 121-340 427-619 (781)
118 1k8k_C P40, ARP2/3 complex 41 81.8 26 0.00088 30.6 22.5 180 120-336 29-237 (372)
119 1nir_A Nitrite reductase; hemo 81.5 38 0.0013 32.3 17.3 110 213-336 334-462 (543)
120 3s94_A LRP-6, low-density lipo 81.4 42 0.0014 32.7 22.8 188 105-335 48-246 (619)
121 3k26_A Polycomb protein EED; W 81.3 26 0.0009 30.4 17.4 62 263-332 299-366 (366)
122 2mad_H Methylamine dehydrogena 81.1 31 0.0011 31.1 13.6 55 283-338 298-356 (373)
123 2z3z_A Dipeptidyl aminopeptida 81.0 43 0.0015 32.7 20.1 192 120-335 234-438 (706)
124 2fp8_A Strictosidine synthase; 80.9 27 0.00093 30.3 13.2 138 121-290 165-313 (322)
125 1r5m_A SIR4-interacting protei 80.8 30 0.001 30.7 20.1 185 107-331 216-424 (425)
126 2bkl_A Prolyl endopeptidase; m 79.8 48 0.0017 32.5 22.8 190 121-339 202-404 (695)
127 3s94_A LRP-6, low-density lipo 79.5 48 0.0016 32.3 25.3 209 105-356 357-573 (619)
128 1jmx_B Amine dehydrogenase; ox 79.5 25 0.00087 30.3 12.3 106 211-334 8-136 (349)
129 3mkq_A Coatomer beta'-subunit; 79.4 52 0.0018 32.6 22.0 179 120-336 34-221 (814)
130 3hrp_A Uncharacterized protein 79.1 17 0.00058 33.3 11.2 108 212-338 140-255 (409)
131 3jro_A Fusion protein of prote 78.5 56 0.0019 32.5 16.0 184 120-333 76-286 (753)
132 4a11_B DNA excision repair pro 78.4 35 0.0012 30.1 17.4 57 120-190 121-177 (408)
133 1vyh_C Platelet-activating fac 78.4 39 0.0013 30.6 21.7 52 280-334 317-371 (410)
134 2ovr_B FBW7, F-BOX/WD repeat p 78.2 40 0.0014 30.6 22.6 132 179-333 299-443 (445)
135 4a0p_A LRP6, LRP-6, low-densit 77.9 54 0.0019 32.0 22.4 175 122-336 16-201 (628)
136 4gqb_B Methylosome protein 50; 77.8 37 0.0013 30.0 18.4 188 108-335 138-334 (344)
137 2ad6_A Methanol dehydrogenase 77.7 23 0.00078 34.2 12.2 110 207-337 56-190 (571)
138 4a0p_A LRP6, LRP-6, low-densit 77.5 56 0.0019 31.9 23.6 188 105-335 45-240 (628)
139 4ery_A WD repeat-containing pr 77.5 33 0.0011 29.3 22.9 179 120-337 44-228 (312)
140 3ow8_A WD repeat-containing pr 76.7 37 0.0013 29.5 22.5 178 120-337 101-284 (321)
141 1k8k_C P40, ARP2/3 complex 41 76.6 38 0.0013 29.5 18.5 66 262-338 213-282 (372)
142 1yiq_A Quinohemoprotein alcoho 76.4 24 0.00082 34.9 12.1 112 208-337 65-197 (689)
143 4aow_A Guanine nucleotide-bind 76.3 36 0.0012 29.2 21.5 130 179-334 195-339 (340)
144 3dr2_A Exported gluconolactona 76.3 23 0.00077 30.6 10.8 107 213-339 55-185 (305)
145 2ghs_A AGR_C_1268P; regucalcin 76.1 39 0.0013 29.5 13.5 101 214-338 61-174 (326)
146 3hrp_A Uncharacterized protein 75.5 48 0.0016 30.2 21.3 196 106-339 139-361 (409)
147 4ery_A WD repeat-containing pr 75.4 38 0.0013 28.9 21.1 176 120-337 86-273 (312)
148 3bg1_A Protein SEC13 homolog; 74.3 42 0.0014 28.9 15.0 60 280-339 237-301 (316)
149 1kv9_A Type II quinohemoprotei 74.1 33 0.0011 33.7 12.4 111 207-337 60-192 (668)
150 2fp8_A Strictosidine synthase; 74.0 43 0.0015 29.0 17.5 99 230-342 165-279 (322)
151 1kb0_A Quinohemoprotein alcoho 73.9 43 0.0015 33.0 13.2 111 208-337 72-204 (677)
152 3iuj_A Prolyl endopeptidase; h 73.8 71 0.0024 31.4 20.7 113 211-339 289-412 (693)
153 2pm7_B Protein transport prote 73.8 41 0.0014 28.6 18.4 58 280-338 228-292 (297)
154 1yr2_A Prolyl oligopeptidase; 73.3 75 0.0026 31.4 24.1 162 155-338 272-447 (741)
155 4hw6_A Hypothetical protein, I 73.2 57 0.002 30.0 13.9 112 208-335 142-262 (433)
156 3sfz_A APAF-1, apoptotic pepti 72.9 99 0.0034 32.6 24.8 189 107-338 625-834 (1249)
157 3bg1_A Protein SEC13 homolog; 71.9 48 0.0016 28.5 13.8 53 280-332 188-247 (316)
158 3tc9_A Hypothetical hydrolase; 71.9 61 0.0021 29.8 15.4 110 213-338 149-263 (430)
159 4ggc_A P55CDC, cell division c 71.5 46 0.0016 28.1 22.0 67 106-190 34-100 (318)
160 4aez_A CDC20, WD repeat-contai 71.1 57 0.002 29.1 22.1 109 213-338 228-342 (401)
161 4a2l_A BT_4663, two-component 71.0 88 0.003 31.2 21.1 137 180-335 378-529 (795)
162 3pe7_A Oligogalacturonate lyas 70.9 55 0.0019 28.8 16.9 114 120-248 167-283 (388)
163 2ecf_A Dipeptidyl peptidase IV 70.8 83 0.0028 30.8 16.3 189 122-337 264-464 (741)
164 1flg_A Protein (quinoprotein e 70.8 40 0.0014 32.6 11.9 113 208-338 63-199 (582)
165 1evh_A WH1 domain, protein (ME 70.6 8.8 0.0003 28.2 5.5 42 121-171 11-52 (112)
166 1got_B GT-beta; complex (GTP-b 69.9 55 0.0019 28.5 25.1 186 108-335 66-260 (340)
167 3iz6_a 40S ribosomal protein R 68.7 63 0.0022 28.7 15.3 98 230-337 180-285 (380)
168 2iwa_A Glutamine cyclotransfer 68.4 56 0.0019 27.9 21.4 158 153-340 23-190 (266)
169 2ghs_A AGR_C_1268P; regucalcin 68.2 60 0.0021 28.2 21.2 198 106-341 58-269 (326)
170 2hz6_A Endoplasmic reticulum t 68.2 1.7 5.8E-05 39.5 1.4 30 208-244 4-35 (369)
171 3scy_A Hypothetical bacterial 67.4 63 0.0022 28.2 18.4 187 123-338 31-248 (361)
172 3lrv_A PRE-mRNA-splicing facto 67.2 48 0.0016 28.8 11.0 93 230-334 149-246 (343)
173 3ow8_A WD repeat-containing pr 66.7 63 0.0022 27.9 21.9 94 230-337 144-242 (321)
174 3fvz_A Peptidyl-glycine alpha- 66.5 65 0.0022 27.9 22.5 207 106-332 99-322 (329)
175 1n7d_A LDL receptor, low-densi 65.9 31 0.0011 34.3 10.1 137 107-271 463-603 (699)
176 1p22_A F-BOX/WD-repeat protein 65.0 80 0.0027 28.5 19.6 169 120-334 192-367 (435)
177 2pm9_A Protein WEB1, protein t 64.9 75 0.0026 28.1 13.6 185 120-336 88-298 (416)
178 3mkq_A Coatomer beta'-subunit; 64.8 1.1E+02 0.0038 30.1 25.6 178 120-337 76-264 (814)
179 3c5m_A Oligogalacturonate lyas 64.4 74 0.0025 27.9 17.6 199 120-340 167-392 (396)
180 3azo_A Aminopeptidase; POP fam 64.2 1E+02 0.0036 29.6 18.6 190 121-339 161-376 (662)
181 1pby_B Quinohemoprotein amine 64.0 67 0.0023 27.3 13.2 97 230-337 11-129 (337)
182 1npe_A Nidogen, entactin; glyc 63.3 65 0.0022 26.8 20.0 159 105-303 87-248 (267)
183 1egx_A VAsp, vasodilator-stimu 62.8 15 0.0005 27.1 5.4 44 121-172 11-54 (115)
184 1ddw_A GLGF-domain protein hom 62.0 20 0.00067 26.7 5.9 40 121-171 11-51 (120)
185 3f3f_A Nucleoporin SEH1; struc 60.4 77 0.0026 26.8 13.9 96 230-334 33-145 (351)
186 2vdu_B TRNA (guanine-N(7)-)-me 60.4 1E+02 0.0034 28.0 20.3 97 230-336 171-275 (450)
187 3hxj_A Pyrrolo-quinoline quino 60.3 80 0.0027 26.9 11.1 127 179-338 117-250 (330)
188 3v9f_A Two-component system se 59.7 1.4E+02 0.0049 29.6 24.2 197 107-339 322-531 (781)
189 3zwl_B Eukaryotic translation 59.6 84 0.0029 27.0 20.9 186 120-337 95-309 (369)
190 3lrv_A PRE-mRNA-splicing facto 59.6 87 0.003 27.1 18.1 197 102-337 88-299 (343)
191 1w6s_A Methanol dehydrogenase 58.5 72 0.0025 30.9 11.0 110 207-337 56-196 (599)
192 2ymu_A WD-40 repeat protein; u 57.9 1.2E+02 0.0042 28.3 21.6 95 230-339 448-546 (577)
193 3g4e_A Regucalcin; six bladed 57.2 90 0.0031 26.5 18.9 158 154-335 16-185 (297)
194 2oiz_A Aromatic amine dehydrog 55.7 1.1E+02 0.0037 27.0 15.4 74 262-339 265-341 (361)
195 3c75_H MADH, methylamine dehyd 55.7 1.3E+02 0.0043 27.8 13.0 74 262-337 330-407 (426)
196 3dm0_A Maltose-binding peripla 54.6 1.6E+02 0.0054 28.6 21.9 141 120-291 493-633 (694)
197 2vdu_B TRNA (guanine-N(7)-)-me 54.5 1.2E+02 0.0043 27.4 26.1 190 120-338 170-399 (450)
198 2ynn_A Coatomer subunit beta'; 54.5 1E+02 0.0034 26.2 22.4 178 120-338 76-265 (304)
199 3vl1_A 26S proteasome regulato 53.7 1.2E+02 0.0041 26.8 21.6 93 230-332 313-419 (420)
200 4aow_A Guanine nucleotide-bind 53.5 1E+02 0.0035 26.1 20.4 94 230-336 195-290 (340)
201 3dwl_C Actin-related protein 2 52.6 1.2E+02 0.004 26.4 16.1 68 262-337 216-286 (377)
202 2pm7_B Protein transport prote 52.2 1.1E+02 0.0037 25.9 20.0 54 280-333 179-239 (297)
203 1erj_A Transcriptional repress 52.1 1.3E+02 0.0043 26.7 21.9 193 107-336 133-345 (393)
204 2aq5_A Coronin-1A; WD40 repeat 52.0 1.3E+02 0.0043 26.7 25.0 184 120-334 56-256 (402)
205 1i2h_A PSD-ZIP45(homer-1C/VESL 51.7 32 0.0011 27.2 5.8 40 121-171 16-56 (168)
206 3fm0_A Protein CIAO1; WDR39,SG 51.4 1.2E+02 0.0041 26.3 19.1 141 178-337 37-186 (345)
207 3ei3_B DNA damage-binding prot 51.0 1.3E+02 0.0043 26.4 21.1 153 153-332 76-236 (383)
208 1jmx_B Amine dehydrogenase; ox 50.7 98 0.0033 26.4 9.9 65 262-337 10-79 (349)
209 2xzm_R RACK1; ribosome, transl 50.4 1.2E+02 0.0042 26.1 18.2 93 230-335 194-288 (343)
210 2ymu_A WD-40 repeat protein; u 49.5 1.7E+02 0.0057 27.3 24.2 176 120-339 324-505 (577)
211 1sq9_A Antiviral protein SKI8; 49.4 1.3E+02 0.0046 26.2 23.5 55 280-337 206-272 (397)
212 3no2_A Uncharacterized protein 49.2 1.2E+02 0.0041 25.6 17.5 140 177-340 13-163 (276)
213 3sre_A PON1, serum paraoxonase 48.2 1.5E+02 0.0051 26.4 17.8 192 120-332 82-298 (355)
214 3mmy_A MRNA export factor; mRN 47.8 1.3E+02 0.0045 25.6 21.2 183 120-337 107-309 (368)
215 1pgu_A Actin interacting prote 47.5 1.8E+02 0.0062 27.2 19.6 133 178-332 466-614 (615)
216 3frx_A Guanine nucleotide-bind 47.2 1.3E+02 0.0046 25.6 24.1 192 106-335 74-270 (319)
217 2oaj_A Protein SNI1; WD40 repe 47.1 2.5E+02 0.0084 28.6 23.0 176 120-337 38-247 (902)
218 1erj_A Transcriptional repress 47.1 1.5E+02 0.0052 26.2 14.9 105 213-336 134-242 (393)
219 4h5i_A Guanine nucleotide-exch 46.6 1.5E+02 0.0052 26.0 20.3 194 106-334 142-345 (365)
220 2jp2_A Spred-2, sprouty-relate 46.6 29 0.00098 26.0 4.7 43 121-171 20-65 (126)
221 3tc9_A Hypothetical hydrolase; 45.9 1.8E+02 0.006 26.6 20.1 195 107-339 148-377 (430)
222 2pbi_B Guanine nucleotide-bind 45.0 1.6E+02 0.0053 25.7 22.5 172 120-329 175-354 (354)
223 1pby_B Quinohemoprotein amine 44.2 1.4E+02 0.0049 25.1 17.4 149 178-337 10-168 (337)
224 4a2l_A BT_4663, two-component 44.1 2.5E+02 0.0086 27.8 23.5 198 108-339 367-578 (795)
225 3azo_A Aminopeptidase; POP fam 43.0 2.3E+02 0.0078 27.1 21.1 211 108-339 90-332 (662)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 42.8 1.5E+02 0.0051 24.8 17.9 94 230-333 198-300 (314)
227 3f3f_A Nucleoporin SEH1; struc 42.5 1.5E+02 0.0052 24.8 20.5 34 306-339 309-345 (351)
228 1pgu_A Actin interacting prote 41.6 2.2E+02 0.0076 26.5 22.1 154 154-335 164-331 (615)
229 3v7d_B Cell division control p 39.7 2.1E+02 0.0072 25.7 26.6 66 261-337 278-346 (464)
230 4h5i_A Guanine nucleotide-exch 38.5 2E+02 0.0069 25.1 11.9 66 262-337 144-211 (365)
231 1yfq_A Cell cycle arrest prote 38.2 1.8E+02 0.0062 24.5 17.5 175 120-333 32-226 (342)
232 1got_B GT-beta; complex (GTP-b 38.1 1.9E+02 0.0066 24.8 22.9 170 120-329 163-340 (340)
233 3sov_A LRP-6, low-density lipo 38.1 2E+02 0.0068 24.9 18.8 138 105-271 87-227 (318)
234 3ott_A Two-component system se 38.1 3E+02 0.01 27.0 13.4 130 181-332 495-626 (758)
235 2kwv_A RAD30 homolog B, DNA po 37.9 16 0.00053 21.8 1.5 16 10-25 22-37 (48)
236 3i2n_A WD repeat-containing pr 37.3 1.9E+02 0.0065 24.5 19.9 140 178-334 138-293 (357)
237 3fvz_A Peptidyl-glycine alpha- 36.5 2E+02 0.007 24.6 22.9 186 121-338 69-283 (329)
238 3syx_A Sprouty-related, EVH1 d 36.2 61 0.0021 24.3 5.0 19 120-138 17-35 (130)
239 3hxj_A Pyrrolo-quinoline quino 36.2 2E+02 0.0067 24.3 12.4 95 210-331 104-203 (330)
240 1xod_A Spred1; sprouty, EVH1, 35.3 58 0.002 24.0 4.8 41 121-171 11-56 (118)
241 3sfz_A APAF-1, apoptotic pepti 34.9 4.2E+02 0.014 27.7 21.4 181 120-336 678-875 (1249)
242 2qe8_A Uncharacterized protein 34.5 1.9E+02 0.0066 25.0 9.2 62 208-270 70-139 (343)
243 2w18_A PALB2, fancn, partner a 34.3 1.3E+02 0.0043 27.0 7.7 34 262-303 52-85 (356)
244 3vu4_A KMHSV2; beta-propeller 33.7 2.4E+02 0.0081 24.5 11.1 50 280-333 80-129 (355)
245 2p4o_A Hypothetical protein; p 33.4 2.2E+02 0.0076 24.1 27.2 193 107-338 41-247 (306)
246 3vu4_A KMHSV2; beta-propeller 33.2 2.4E+02 0.0082 24.4 20.0 62 262-334 206-273 (355)
247 2xe4_A Oligopeptidase B; hydro 32.9 3.7E+02 0.013 26.5 17.5 116 213-339 330-465 (751)
248 2hes_X YDR267CP; beta-propelle 31.8 2.4E+02 0.0083 24.0 18.1 59 280-338 220-286 (330)
249 4hw6_A Hypothetical protein, I 31.5 3E+02 0.01 25.0 19.2 192 108-338 152-379 (433)
250 4hvt_A Ritya.17583.B, post-pro 31.5 3.9E+02 0.013 26.4 16.2 120 210-338 296-435 (711)
251 2xdw_A Prolyl endopeptidase; a 30.9 3.8E+02 0.013 26.0 26.2 164 155-338 237-422 (710)
252 1mda_H Methylamine dehydrogena 30.8 2.7E+02 0.0092 24.8 9.5 44 294-337 304-351 (368)
253 3iz6_a 40S ribosomal protein R 29.6 2.8E+02 0.0097 24.2 20.3 180 120-334 179-377 (380)
254 2xyi_A Probable histone-bindin 29.3 3.1E+02 0.011 24.5 15.1 184 120-336 203-414 (430)
255 2hes_X YDR267CP; beta-propelle 28.6 2.7E+02 0.0094 23.7 17.6 52 280-332 270-328 (330)
256 3mmy_A MRNA export factor; mRN 27.8 2.8E+02 0.0095 23.4 16.9 154 153-338 42-205 (368)
257 1sq9_A Antiviral protein SKI8; 27.7 3E+02 0.01 23.8 19.5 98 230-336 91-220 (397)
258 2be1_A Serine/threonine-protei 27.4 2.3E+02 0.0077 25.1 8.2 25 314-338 111-136 (339)
259 1vyh_C Platelet-activating fac 26.5 3.4E+02 0.012 24.0 25.4 132 120-291 129-266 (410)
260 2xdw_A Prolyl endopeptidase; a 26.3 4.5E+02 0.015 25.4 17.1 198 121-340 151-377 (710)
261 3ju4_A Endo-N-acetylneuraminid 25.9 3.2E+02 0.011 25.1 8.6 64 208-271 343-406 (670)
262 3q6k_A 43.2 kDa salivary prote 23.8 2.8E+02 0.0094 25.0 8.1 62 229-297 122-197 (381)
263 2z3z_A Dipeptidyl aminopeptida 23.7 4.9E+02 0.017 24.9 23.6 104 229-338 234-350 (706)
264 2ecf_A Dipeptidyl peptidase IV 23.7 5E+02 0.017 25.0 23.8 99 231-338 264-374 (741)
265 2hz6_A Endoplasmic reticulum t 22.8 1.2E+02 0.0042 26.8 5.7 130 179-337 59-197 (369)
266 3gre_A Serine/threonine-protei 22.2 4E+02 0.014 23.4 18.9 107 214-338 182-298 (437)
267 4ggc_A P55CDC, cell division c 22.0 3.3E+02 0.011 22.4 17.2 144 120-291 171-316 (318)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.54 E-value=1.9e-12 Score=117.97 Aligned_cols=214 Identities=13% Similarity=0.031 Sum_probs=142.7
Q ss_pred eeccCceEEEeeCC-----C--C--ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEee-
Q 045675 104 VGSCNGLLCLDVSS-----A--F--GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF- 173 (382)
Q Consensus 104 ~~s~~Gll~~~~~~-----~--~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~- 173 (382)
....+|.|++..+. . . ...++++||.|++|..+|++|..+.. ++.... .+...|++....
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--------~~~~~~--~~~lyv~GG~~~~ 110 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL--------FGLGEA--LNSIYVVGGREIK 110 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES--------CEEEEE--TTEEEEECCEESS
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc--------eeEEEE--CCEEEEEeCCcCC
Confidence 44457777655441 1 0 23489999999999999988764321 111111 233333333221
Q ss_pred -cCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCC
Q 045675 174 -QARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELP 251 (382)
Q Consensus 174 -~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~ 251 (382)
.......+++|+..+++|+.++.++.++.. +.++.++|++|.+++..........+.+||+.+++|+.+ ++|..+
T Consensus 111 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 187 (315)
T 4asc_A 111 DGERCLDSVMCYDRLSFKWGESDPLPYVVYG---HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR 187 (315)
T ss_dssp TTCCBCCCEEEEETTTTEEEECCCCSSCCBS---CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred CCCcccceEEEECCCCCcEeECCCCCCcccc---eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch
Confidence 122345899999999999999887655443 678889999999998733323456899999999999998 566554
Q ss_pred CCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCcEEEEEc--------
Q 045675 252 TDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSKIIMKSV-------- 322 (382)
Q Consensus 252 ~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------- 322 (382)
.....+..+|+|++++.. .. ....-.+|.++-... |+.+..++.........+ -++.|++...
T Consensus 188 --~~~~~~~~~~~iyv~GG~--~~---~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~ 259 (315)
T 4asc_A 188 --SLFGATVHDGRIIVAAGV--TD---TGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-LVGTLYAIGGFATLETES 259 (315)
T ss_dssp --BSCEEEEETTEEEEEEEE--CS---SSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTT
T ss_pred --hceEEEEECCEEEEEecc--CC---CCccceEEEEECCCCeEEECCCCCCcccceeEEE-ECCEEEEECCccccCcCC
Confidence 456677889999999987 31 122346777765534 999876654443333333 3566766543
Q ss_pred --------CeEEEEeCCCCcEEEE
Q 045675 323 --------DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 323 --------~~~~~yd~~t~~~~~v 338 (382)
+.+..||+++++|+.+
T Consensus 260 ~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 260 GELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp SCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ccccccccCcEEEecCCCChhhhh
Confidence 1588999999999999
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.53 E-value=6.8e-13 Score=120.41 Aligned_cols=216 Identities=10% Similarity=0.014 Sum_probs=142.8
Q ss_pred eeccCceEEEeeCCC--CceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEE
Q 045675 104 VGSCNGLLCLDVSSA--FGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIA 181 (382)
Q Consensus 104 ~~s~~Gll~~~~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 181 (382)
....+|.|++..+.. ....+.++||.|++|..+|+++..... . ... .+ .+...|++...........+
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~---~~~--~~---~~~iyv~GG~~~~~~~~~~~ 120 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS--L---AAC--AA---EGKIYTSGGSEVGNSALYLF 120 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS--C---EEE--EE---TTEEEEECCBBTTBSCCCCE
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc--e---eEE--EE---CCEEEEECCCCCCCcEeeeE
Confidence 344577777665531 146789999999999999887754321 1 111 11 22233333221112234589
Q ss_pred EEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccc---cccEEEEEECCCceeeEe-CCCCCCCCCeee
Q 045675 182 EVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLV---NEKFVVSYDMNLELFWRT-AMPELPTDCYVK 257 (382)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~---~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~ 257 (382)
++|++.+++|+.++.++..+.. +.++.++|++|.+++...... ....+.+||+.+++|+.+ ++|..+ ....
T Consensus 121 ~~~d~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~ 195 (306)
T 3ii7_A 121 ECYDTRTESWHTKPSMLTQRCS---HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR--KNHG 195 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBS---CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC--BSCE
T ss_pred EEEeCCCCceEeCCCCcCCcce---eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh--hcce
Confidence 9999999999999887655443 578889999999988643221 145799999999999999 566554 4566
Q ss_pred EEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEEEe
Q 045675 258 ALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFLFN 329 (382)
Q Consensus 258 l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~yd 329 (382)
++..+|+|++++.. .. ....-.+|.++-.. .|+.+..++.........+ -++.|++... +.+..||
T Consensus 196 ~~~~~~~i~v~GG~--~~---~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 196 LVFVKDKIFAVGGQ--NG---LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA-VGSIVYVLAGFQGVGRLGHILEYN 269 (306)
T ss_dssp EEEETTEEEEECCE--ET---TEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE-ETTEEEEEECBCSSSBCCEEEEEE
T ss_pred EEEECCEEEEEeCC--CC---CCCCceEEEeeCCCCcEEECCCCCCCccceeEEE-ECCEEEEEeCcCCCeeeeeEEEEc
Confidence 77889999999886 21 11122456665443 3998876654333333333 3667877764 2799999
Q ss_pred CCCCcEEEEee
Q 045675 330 PKTKRNFILPI 340 (382)
Q Consensus 330 ~~t~~~~~v~~ 340 (382)
+++++|+.+..
T Consensus 270 ~~~~~W~~~~~ 280 (306)
T 3ii7_A 270 TETDKWVANSK 280 (306)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEeCCC
Confidence 99999999953
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.53 E-value=1.7e-12 Score=117.53 Aligned_cols=213 Identities=13% Similarity=0.026 Sum_probs=141.7
Q ss_pred eccCceEEEeeCCC---CceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEE
Q 045675 105 GSCNGLLCLDVSSA---FGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIA 181 (382)
Q Consensus 105 ~s~~Gll~~~~~~~---~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 181 (382)
...+|.|++..+.. ....+.++||.|++|..+|+++..... . +.... .+...|++... .......+
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~------~~~~~--~~~iyv~GG~~-~~~~~~~~ 126 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST--L------GAAVL--NGLLYAVGGFD-GSTGLSSV 126 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS--C------EEEEE--TTEEEEEEEEC-SSCEEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc--e------EEEEE--CCEEEEEcCCC-CCccCceE
Confidence 44577777665521 145789999999999999987764321 1 11111 23333333332 12223489
Q ss_pred EEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeeccccc-ccccEEEEEECCCceeeEe-CCCCCCCCCeeeEE
Q 045675 182 EVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVL-VNEKFVVSYDMNLELFWRT-AMPELPTDCYVKAL 259 (382)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~ 259 (382)
++|++.+++|+.++.++..+.. +.++.++|++|.+++..... .....+..||+.+++|+.+ ++|..+ ....++
T Consensus 127 ~~~d~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~ 201 (302)
T 2xn4_A 127 EAYNIKSNEWFHVAPMNTRRSS---VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR--SGAGVG 201 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBS---CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC--BSCEEE
T ss_pred EEEeCCCCeEeecCCCCCcccC---ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc--ccccEE
Confidence 9999999999999877654433 57888999999998764321 1235799999999999998 566554 456677
Q ss_pred EeCCeEEEEEecCCCccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEcC-------eEEEEeCC
Q 045675 260 SYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSVD-------QFFLFNPK 331 (382)
Q Consensus 260 ~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~-------~~~~yd~~ 331 (382)
..+|+|++++.. .. ....-.+|.++-.. .|+.+..++.......+.+ .++.|++.... .+..||++
T Consensus 202 ~~~~~iyv~GG~--~~---~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 202 VLNNLLYAVGGH--DG---PLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EETTEEEEECCB--SS---SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EECCEEEEECCC--CC---CcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCC
Confidence 889999999886 21 11122456665443 3999876654433323333 36677777642 69999999
Q ss_pred CCcEEEEe
Q 045675 332 TKRNFILP 339 (382)
Q Consensus 332 t~~~~~v~ 339 (382)
+++|+.+.
T Consensus 276 ~~~W~~~~ 283 (302)
T 2xn4_A 276 TDKWTVVS 283 (302)
T ss_dssp TTEEEECS
T ss_pred CCeEEECC
Confidence 99999985
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.53 E-value=2.2e-12 Score=117.78 Aligned_cols=215 Identities=11% Similarity=0.041 Sum_probs=141.7
Q ss_pred eeeccCceEEEeeCCC-----C----ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEee
Q 045675 103 IVGSCNGLLCLDVSSA-----F----GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF 173 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~~-----~----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~ 173 (382)
.+...+|.|++..+.. . ...++++||.|++|..+|++|..... + +.... .+...|++....
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~------~~~~~--~~~iyv~GG~~~ 120 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL--F------GLGEV--DDKIYVVAGKDL 120 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS--C------EEEEE--TTEEEEEEEEBT
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc--c------ceEEE--CCEEEEEcCccC
Confidence 3445677777665521 0 12388999999999999987764321 1 11111 233333333321
Q ss_pred -cCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCC
Q 045675 174 -QARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELP 251 (382)
Q Consensus 174 -~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~ 251 (382)
.......+++|++.+++|+.++.++..+.. +.++.++|++|.+++..........+..||+.+++|+.+ ++|..+
T Consensus 121 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 197 (318)
T 2woz_A 121 QTEASLDSVLCYDPVAAKWSEVKNLPIKVYG---HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR 197 (318)
T ss_dssp TTCCEEEEEEEEETTTTEEEEECCCSSCEES---CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCcccceEEEEeCCCCCEeECCCCCCcccc---cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc
Confidence 111234899999999999999877655544 578889999999987643222345799999999999999 556554
Q ss_pred CCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCcEEEEEc--------
Q 045675 252 TDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSKIIMKSV-------- 322 (382)
Q Consensus 252 ~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------- 322 (382)
.....+..+|+|++++.. .. ....-.+|.++-... |+++..++.......+.+ .++.|++..+
T Consensus 198 --~~~~~~~~~~~iyv~GG~--~~---~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~ 269 (318)
T 2woz_A 198 --SMFGVAIHKGKIVIAGGV--TE---DGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAMIQLES 269 (318)
T ss_dssp --BSCEEEEETTEEEEEEEE--ET---TEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCCBC---
T ss_pred --ccceEEEECCEEEEEcCc--CC---CCccceEEEEECCCCeEEECCCCCCcccceEEEE-ECCEEEEECCeeccCCCC
Confidence 445677889999999986 21 122345666664433 999876665433333333 3567776642
Q ss_pred --------CeEEEEeCCCCcEEEE
Q 045675 323 --------DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 323 --------~~~~~yd~~t~~~~~v 338 (382)
+.++.||+++++|+++
T Consensus 270 ~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 270 KEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp -CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ceeccceeeeEEEEeCCCCEehhh
Confidence 2689999999999999
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.53 E-value=1.1e-12 Score=119.05 Aligned_cols=234 Identities=12% Similarity=0.017 Sum_probs=148.0
Q ss_pred ceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC
Q 045675 109 GLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST 188 (382)
Q Consensus 109 Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t 188 (382)
+.|++..+......+.++||.+++|..+++++..... . +.... .+. ++.+..........+++|+..+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~------~~~~~--~~~--lyv~GG~~~~~~~~~~~~d~~~ 79 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD--A------ACVFW--DNV--VYILGGSQLFPIKRMDCYNVVK 79 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS--C------EEEEE--TTE--EEEECCBSSSBCCEEEEEETTT
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce--e------EEEEE--CCE--EEEEeCCCCCCcceEEEEeCCC
Confidence 4454444422245789999999999999987764321 1 11111 222 3333222222346899999999
Q ss_pred CCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeCCeEEE
Q 045675 189 GKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYDQSLAL 267 (382)
Q Consensus 189 ~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~ 267 (382)
++|+..+.++..+.. +.++.++|.+|.+++..........+..||+.+++|+.+ ++|..+ .....+..+|+|++
T Consensus 80 ~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv 154 (306)
T 3ii7_A 80 DSWYSKLGPPTPRDS---LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR--CSHGMVEANGLIYV 154 (306)
T ss_dssp TEEEEEECCSSCCBS---CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEE
T ss_pred CeEEECCCCCccccc---eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc--ceeEEEEECCEEEE
Confidence 999999887654443 578889999999988652323456799999999999998 566554 45566778999999
Q ss_pred EEecCCCccCCC-CCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEEE
Q 045675 268 AVYPGLGFRSRL-SNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 268 ~~~~~~~~~~~~-~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~v 338 (382)
++.. ...... ...-.+|.++-.. .|+++..++......... ..++.|++... +.+..||+++++|+.+
T Consensus 155 ~GG~--~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 155 CGGS--LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp ECCE--ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred ECCC--CCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence 9886 211000 0023455555432 499987665433333333 33667777653 2799999999999999
Q ss_pred eeeCCCCCeEEEEEEeeceeecCC
Q 045675 339 PIDSGMGYSYKVFTYVDSIVAVNG 362 (382)
Q Consensus 339 ~~~~~~~~~~~~~~y~~SLv~~~~ 362 (382)
.......+...+..+...|.-+.+
T Consensus 232 ~~~p~~r~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 232 SPMPWKGVTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp CCCSCCBSCCEEEEETTEEEEEEC
T ss_pred CCCCCCccceeEEEECCEEEEEeC
Confidence 643322223445555555555544
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.49 E-value=2.6e-12 Score=116.77 Aligned_cols=214 Identities=15% Similarity=0.064 Sum_probs=141.1
Q ss_pred eeccCceEEEeeCC----C---CceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCC
Q 045675 104 VGSCNGLLCLDVSS----A---FGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQAR 176 (382)
Q Consensus 104 ~~s~~Gll~~~~~~----~---~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~ 176 (382)
....+|.|++..+. . ....++++||.|++|..+|+++..... . +.... .+...|++... ...
T Consensus 66 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~------~~~~~--~~~iyv~GG~~-~~~ 134 (308)
T 1zgk_A 66 GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR--I------GVGVI--DGHIYAVGGSH-GCI 134 (308)
T ss_dssp EEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT--C------EEEEE--TTEEEEECCEE-TTE
T ss_pred EEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc--c------EEEEE--CCEEEEEcCCC-CCc
Confidence 34557777766542 1 134689999999999999987764321 1 11111 22233333222 122
Q ss_pred CCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCe
Q 045675 177 YDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCY 255 (382)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~ 255 (382)
....+++|+..+++|+.++.++..+.. +.++.++|++|.+++..... ....+..||+.+++|+.+ ++|..+ ..
T Consensus 135 ~~~~~~~yd~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r--~~ 208 (308)
T 1zgk_A 135 HHNSVERYEPERDEWHLVAPMLTRRIG---VGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERNEWRMITAMNTIR--SG 208 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBS---CEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEECCCCSSCC--BS
T ss_pred ccccEEEECCCCCeEeECCCCCccccc---eEEEEECCEEEEEeCCCCCC-cCceEEEEeCCCCeEeeCCCCCCcc--cc
Confidence 345899999999999999877554433 57888899999998765322 245799999999999998 555544 44
Q ss_pred eeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEE
Q 045675 256 VKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFL 327 (382)
Q Consensus 256 ~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~ 327 (382)
...+..+++|++++.. .. ....-.+|.++-.. .|+++..++.........+ .++.|++... +.+..
T Consensus 209 ~~~~~~~~~iyv~GG~--~~---~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~ 282 (308)
T 1zgk_A 209 AGVCVLHNCIYAAGGY--DG---QDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVEC 282 (308)
T ss_dssp CEEEEETTEEEEECCB--CS---SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEE
T ss_pred ceEEEECCEEEEEeCC--CC---CCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEE
Confidence 5667789999999886 21 11233455555432 3998876654433223333 3667777654 17999
Q ss_pred EeCCCCcEEEEee
Q 045675 328 FNPKTKRNFILPI 340 (382)
Q Consensus 328 yd~~t~~~~~v~~ 340 (382)
||+++++|+++.-
T Consensus 283 yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 283 YDPDTDTWSEVTR 295 (308)
T ss_dssp EETTTTEEEEEEE
T ss_pred EcCCCCEEeecCC
Confidence 9999999999954
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.49 E-value=1.3e-11 Score=111.51 Aligned_cols=212 Identities=10% Similarity=0.014 Sum_probs=140.6
Q ss_pred eeccCceEEEeeCCC---CceeEEEEcccccc---eeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEee-cCC
Q 045675 104 VGSCNGLLCLDVSSA---FGMAFVLWNPATNE---FKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF-QAR 176 (382)
Q Consensus 104 ~~s~~Gll~~~~~~~---~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~-~~~ 176 (382)
....+|.|++..+.. ....++++||.|++ |..+|+++..... . +.... .+ +++.+... ...
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~--~------~~~~~--~~--~lyv~GG~~~~~ 125 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL--A------GATTL--GD--MIYVSGGFDGSR 125 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS--C------EEEEE--TT--EEEEECCBCSSC
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc--e------eEEEE--CC--EEEEEcccCCCc
Confidence 344577776665421 14579999999999 9999887764321 1 11111 12 23333221 122
Q ss_pred CCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCe
Q 045675 177 YDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCY 255 (382)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~ 255 (382)
....+++|++.+++|+.++.++..+.. +.++.++|++|.+++..... ....+.+||+.+++|+.+ ++|..+ ..
T Consensus 126 ~~~~~~~~d~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r--~~ 199 (301)
T 2vpj_A 126 RHTSMERYDPNIDQWSMLGDMQTAREG---AGLVVASGVIYCLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKR--SG 199 (301)
T ss_dssp BCCEEEEEETTTTEEEEEEECSSCCBS---CEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCC--BS
T ss_pred ccceEEEEcCCCCeEEECCCCCCCccc---ceEEEECCEEEEECCCCCCc-ccceEEEEeCCCCcEEeCCCCCccc--cc
Confidence 345899999999999999877554433 57888899999998754321 345799999999999998 556554 45
Q ss_pred eeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEcC-------eEEE
Q 045675 256 VKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSVD-------QFFL 327 (382)
Q Consensus 256 ~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~-------~~~~ 327 (382)
..++..+++|++++.. .. ....-.+|.++-.. .|+.+..++.........+ .++.|++.... .+..
T Consensus 200 ~~~~~~~~~i~v~GG~--~~---~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~ 273 (301)
T 2vpj_A 200 AGVALLNDHIYVVGGF--DG---TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIEC 273 (301)
T ss_dssp CEEEEETTEEEEECCB--CS---SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEE
T ss_pred ceEEEECCEEEEEeCC--CC---CcccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccccEEE
Confidence 6677889999999886 21 11123455555432 4998876654443333333 36677776641 7899
Q ss_pred EeCCCCcEEEEe
Q 045675 328 FNPKTKRNFILP 339 (382)
Q Consensus 328 yd~~t~~~~~v~ 339 (382)
||+++++|+.+.
T Consensus 274 yd~~~~~W~~~~ 285 (301)
T 2vpj_A 274 YDPIIDSWEVVT 285 (301)
T ss_dssp EETTTTEEEEEE
T ss_pred EcCCCCeEEEcC
Confidence 999999999985
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.46 E-value=1e-11 Score=113.21 Aligned_cols=221 Identities=12% Similarity=0.052 Sum_probs=138.4
Q ss_pred eEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecC-C--C--CCEEEEEECCCCCeeeecC
Q 045675 122 AFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQA-R--Y--DAIAEVYSTSTGKWKEVAA 196 (382)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~-~--~--~~~~~vyss~t~~W~~~~~ 196 (382)
.+.++||.|++|.. ++++....+ ..++. ....+...|++...... . . ...+++|+..+++|+.++.
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r------~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPK------NHVSL--VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCS------SEEEE--ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred ceEEECCCCCeEec-CCCCCCCCc------cceEE--EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 78999999999986 333321111 11122 22344555555542111 1 1 1258999999999999987
Q ss_pred CCCeeEEeCCcceEEECceEEEEeeccc--ccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeCCeEEEEEecCC
Q 045675 197 GTGSCVIYGGQDAVAVKGVLHWIANGIG--VLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYDQSLALAVYPGL 273 (382)
Q Consensus 197 ~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~~~~ 273 (382)
++.++.. +.++.++|.+|.+++... .......+..||+.+++|+.+ ++|..+ .....+..+|+|++++..
T Consensus 85 ~p~~r~~---~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~-- 157 (315)
T 4asc_A 85 LPSPRCL---FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSHMDLVYVIGGK-- 157 (315)
T ss_dssp BSSCEES---CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCB--
T ss_pred CCcchhc---eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--cceeEEEECCEEEEEeCC--
Confidence 7655544 688889999999988531 122345799999999999998 666654 456677899999999886
Q ss_pred CccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEcC-------eEEEEeCCCCcEEEEeeeCCCC
Q 045675 274 GFRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSVD-------QFFLFNPKTKRNFILPIDSGMG 345 (382)
Q Consensus 274 ~~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~-------~~~~yd~~t~~~~~v~~~~~~~ 345 (382)
... ....-.+|.++-.. .|+++..++......... ..++.|++.... .+..||+++++|+.+.......
T Consensus 158 ~~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 234 (315)
T 4asc_A 158 GSD--RKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER 234 (315)
T ss_dssp CTT--SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC
T ss_pred CCC--CcccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 211 12223455555443 399987665443333333 346677776542 7999999999999996432222
Q ss_pred CeEEEEEEeeceeecC
Q 045675 346 YSYKVFTYVDSIVAVN 361 (382)
Q Consensus 346 ~~~~~~~y~~SLv~~~ 361 (382)
+...+..+...|.-+.
T Consensus 235 ~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 235 SSLSLVSLVGTLYAIG 250 (315)
T ss_dssp BSCEEEEETTEEEEEE
T ss_pred cceeEEEECCEEEEEC
Confidence 1233444444444443
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.46 E-value=1e-11 Score=112.27 Aligned_cols=220 Identities=12% Similarity=0.007 Sum_probs=142.6
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEee-cCCCCCEEEEEECCCCC---eeeec
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF-QARYDAIAEVYSTSTGK---WKEVA 195 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~-~~~~~~~~~vyss~t~~---W~~~~ 195 (382)
...++++||.|++|..+|+++..... . +.... .+ +++.+... .......+++|+..+++ |+.++
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~--~------~~~~~--~~--~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~ 97 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRY--V------ASVSL--HD--RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA 97 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBS--C------EEEEE--TT--EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhcc--c------cEEEE--CC--EEEEEcCCCCCccCceEEEEECCCCCCCeeEECC
Confidence 45789999999999999977754321 1 11111 12 23333221 12234589999999999 99998
Q ss_pred CCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeCCeEEEEEecCCC
Q 045675 196 AGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYDQSLALAVYPGLG 274 (382)
Q Consensus 196 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~~~~~ 274 (382)
.++..+.. +.++.++|++|.+++..... ....+..||+.+++|+.+ ++|..+ .....+..+|+|++++.. .
T Consensus 98 ~~p~~r~~---~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~--~ 169 (301)
T 2vpj_A 98 PMNVRRGL---AGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQTAR--EGAGLVVASGVIYCLGGY--D 169 (301)
T ss_dssp CCSSCCBS---CEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSSCC--BSCEEEEETTEEEEECCB--C
T ss_pred CCCCCccc---eeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCCCc--ccceEEEECCEEEEECCC--C
Confidence 77655443 57888999999998765321 245899999999999998 566554 455667789999999886 2
Q ss_pred ccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEEEeeeCCCCC
Q 045675 275 FRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFILPIDSGMGY 346 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~v~~~~~~~~ 346 (382)
. ....-.+|.++-.. .|+++..++..... ...+..++.|++... +.+..||+++++|+.+.......+
T Consensus 170 ~---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 170 G---LNILNSVEKYDPHTGHWTNVTPMATKRSG-AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC 245 (301)
T ss_dssp S---SCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred C---CcccceEEEEeCCCCcEEeCCCCCccccc-ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc
Confidence 1 11223455555432 49998766543322 233334667777664 279999999999999964322222
Q ss_pred eEEEEEEeeceeecCCC
Q 045675 347 SYKVFTYVDSIVAVNGE 363 (382)
Q Consensus 347 ~~~~~~y~~SLv~~~~~ 363 (382)
...+..+...|.-+.+.
T Consensus 246 ~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 246 YVGATVLRGRLYAIAGY 262 (301)
T ss_dssp SCEEEEETTEEEEECCB
T ss_pred ceeEEEECCEEEEEcCc
Confidence 34455555566555543
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.45 E-value=7.2e-12 Score=113.38 Aligned_cols=223 Identities=13% Similarity=0.061 Sum_probs=142.7
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.++||.+++|..++++|..... . +.... .+...|++... .......+++|+..+++|+.++.++.
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~------~--~~~~~--~~~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~~~p~ 97 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCR------A--GMVYM--AGLVFAVGGFN-GSLRVRTVDSYDPVKDQWTSVANMRD 97 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBS------C--EEEEE--TTEEEEESCBC-SSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred CCcEEEEcCcCCcEeEcccCCccccc------c--eEEEE--CCEEEEEeCcC-CCccccceEEECCCCCceeeCCCCCc
Confidence 34688999999999999877764321 1 11111 12222222211 12234589999999999999988765
Q ss_pred eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeCCeEEEEEecCCCccCC
Q 045675 200 SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYDQSLALAVYPGLGFRSR 278 (382)
Q Consensus 200 ~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~ 278 (382)
.+.. +.++.++|.+|.+++..... ....+..||+.+++|+.+ ++|..+ .....+..+|+|++++.. ... .
T Consensus 98 ~r~~---~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~--~~~-~ 168 (302)
T 2xn4_A 98 RRST---LGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNTRR--SSVGVGVVGGLLYAVGGY--DVA-S 168 (302)
T ss_dssp CCBS---CEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCE--ETT-T
T ss_pred cccc---eEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCCcc--cCceEEEECCEEEEEeCC--CCC-C
Confidence 5443 57888999999998865321 245799999999999998 556544 456677889999999886 210 0
Q ss_pred CCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEEEeeeCCCCCeEEE
Q 045675 279 LSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFILPIDSGMGYSYKV 350 (382)
Q Consensus 279 ~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~v~~~~~~~~~~~~ 350 (382)
....-.+|.++-.. .|+++..++......... ..++.||+... +.+..||+++++|+.+...........+
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEE-EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE
Confidence 00122355555433 399987665443333333 34667777753 2799999999999999643222223445
Q ss_pred EEEeeceeecCCC
Q 045675 351 FTYVDSIVAVNGE 363 (382)
Q Consensus 351 ~~y~~SLv~~~~~ 363 (382)
..+...|.-+.+.
T Consensus 248 ~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 248 CAVNGLLYVVGGD 260 (302)
T ss_dssp EEETTEEEEECCB
T ss_pred EEECCEEEEECCc
Confidence 5555566655543
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.44 E-value=5.3e-12 Score=114.71 Aligned_cols=222 Identities=11% Similarity=0.005 Sum_probs=142.7
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEe---ecCCCCCEEEEEECCCCCeeeecC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVN---FQARYDAIAEVYSTSTGKWKEVAA 196 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~---~~~~~~~~~~vyss~t~~W~~~~~ 196 (382)
...+.++||.+++|..++++|..... . +.... .+...|++... ........+++|+..+++|+.++.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~------~--~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSG------L--AGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP 107 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBS------C--EEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC
T ss_pred cceEEEEcCCCCeEeECCCCCccccc------c--eEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC
Confidence 45789999999999999877764321 1 11111 23333333331 111223579999999999999987
Q ss_pred CCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeCCeEEEEEecCCCc
Q 045675 197 GTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYDQSLALAVYPGLGF 275 (382)
Q Consensus 197 ~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~ 275 (382)
++..+.. +.++.++|++|.+++..... ....+..||+.+++|+.+ ++|..+ .....+..+++|++++.. ..
T Consensus 108 ~p~~r~~---~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~--~~ 179 (308)
T 1zgk_A 108 MSVPRNR---IGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLTRR--IGVGVAVLNRLLYAVGGF--DG 179 (308)
T ss_dssp CSSCCBT---CEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCB--CS
T ss_pred CCcCccc---cEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCccc--cceEEEEECCEEEEEeCC--CC
Confidence 7554433 57888899999998754321 235799999999999998 566554 445667789999999886 21
Q ss_pred cCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEEEeeeCCCCCe
Q 045675 276 RSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFILPIDSGMGYS 347 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~v~~~~~~~~~ 347 (382)
..... .+|.++-.. .|+.+..++.........+ .++.||+... +.+..||+++++|+.+.......+.
T Consensus 180 -~~~~~--~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 180 -TNRLN--SAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA 255 (308)
T ss_dssp -SCBCC--CEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred -CCcCc--eEEEEeCCCCeEeeCCCCCCccccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc
Confidence 11123 345554432 4998876654433333333 3667777664 2799999999999998633222223
Q ss_pred EEEEEEeeceeecCCC
Q 045675 348 YKVFTYVDSIVAVNGE 363 (382)
Q Consensus 348 ~~~~~y~~SLv~~~~~ 363 (382)
..+..+...|.-+.+.
T Consensus 256 ~~~~~~~~~i~v~GG~ 271 (308)
T 1zgk_A 256 LGITVHQGRIYVLGGY 271 (308)
T ss_dssp CEEEEETTEEEEECCB
T ss_pred eEEEEECCEEEEEcCc
Confidence 4455555566555543
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.40 E-value=6.5e-11 Score=107.92 Aligned_cols=234 Identities=14% Similarity=0.080 Sum_probs=143.7
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEee-cCC----CCCEEE
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF-QAR----YDAIAE 182 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~-~~~----~~~~~~ 182 (382)
++.|++..+. ...++||.|++|...|.+...+ + ..++. ....+...|++.... ... ....++
T Consensus 15 ~~~i~~~GG~----~~~~yd~~~~~W~~~~~~~~~~-r------~~~~~--~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 81 (318)
T 2woz_A 15 KDLILLVNDT----AAVAYDPMENECYLTALAEQIP-R------NHSSI--VTQQNQVYVVGGLYVDEENKDQPLQSYFF 81 (318)
T ss_dssp EEEEEEECSS----EEEEEETTTTEEEEEEECTTSC-S------SEEEE--ECSSSCEEEEESSCC-------CCCBEEE
T ss_pred cchhhhcccc----ceEEECCCCCceecccCCccCC-c------cceEE--EEECCEEEEECCcccCccccCCCccccEE
Confidence 4556555553 5789999999999854321111 1 11111 122334444443110 001 123589
Q ss_pred EEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeeccc-ccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEE
Q 045675 183 VYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIG-VLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALS 260 (382)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~ 260 (382)
+|+..+++|+.++.++..+.. +.++.++|++|.+++... .......+.+||+.+++|+.+ ++|..+ .....+.
T Consensus 82 ~~d~~~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~ 156 (318)
T 2woz_A 82 QLDNVSSEWVGLPPLPSARCL---FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV--YGHNVIS 156 (318)
T ss_dssp EEETTTTEEEECSCBSSCBCS---CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE--ESCEEEE
T ss_pred EEeCCCCcEEECCCCCccccc---cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc--cccEEEE
Confidence 999999999999877655433 578889999999998642 112345799999999999998 566554 3455667
Q ss_pred eCCeEEEEEecCCCccCCCCCeEEEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEc-------CeEEEEeCCC
Q 045675 261 YDQSLALAVYPGLGFRSRLSNRFELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-------DQFFLFNPKT 332 (382)
Q Consensus 261 ~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-------~~~~~yd~~t 332 (382)
.+|+|++++.. ... ....-.+|.++-.. .|+++..++.........+ .++.||+... +.+..||+++
T Consensus 157 ~~~~iyv~GG~--~~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 157 HNGMIYCLGGK--TDD--KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp ETTEEEEECCE--ESS--SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred ECCEEEEEcCC--CCC--CCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCC
Confidence 89999999885 211 11122455655443 3999876654332333333 4667777653 1688999999
Q ss_pred CcEEEEeeeCCCCCeEEEEEEeeceeecCCCC
Q 045675 333 KRNFILPIDSGMGYSYKVFTYVDSIVAVNGEN 364 (382)
Q Consensus 333 ~~~~~v~~~~~~~~~~~~~~y~~SLv~~~~~~ 364 (382)
++|+.+...........+..+...|.-+.+..
T Consensus 232 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 232 NKWEVMTEFPQERSSISLVSLAGSLYAIGGFA 263 (318)
T ss_dssp CCEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CeEEECCCCCCcccceEEEEECCEEEEECCee
Confidence 99999964332222345555666666655443
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.37 E-value=2.7e-11 Score=112.29 Aligned_cols=242 Identities=10% Similarity=0.032 Sum_probs=145.3
Q ss_pred eeccCceEEEeeCCCCceeEEEEccc--ccceeccCCCC-CccccccceeEEEEEEEeeCCCCCeEEEEEEee--c--CC
Q 045675 104 VGSCNGLLCLDVSSAFGMAFVLWNPA--TNEFKGLPTPS-LTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF--Q--AR 176 (382)
Q Consensus 104 ~~s~~Gll~~~~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~--~--~~ 176 (382)
.+..+|.|++..+.. ...++++||. +++|..+|++| ..+.. . ..+ .+ .+...|++.... . ..
T Consensus 15 ~~~~~~~iyv~GG~~-~~~~~~~d~~~~~~~W~~~~~~p~~~R~~--~---~~~--~~---~~~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSA-GTAWYKLDTQAKDKKWTALAAFPGGPRDQ--A---TSA--FI---DGNLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp EEEETTEEEEECGGG-TTCEEEEETTSSSCCEEECCCCTTCCCBS--C---EEE--EE---TTEEEEECCEEECTTSCEE
T ss_pred EEEECCEEEEEeCcC-CCeEEEEccccCCCCeeECCCCCCCcCcc--c---eEE--EE---CCEEEEEcCCCCCCCccce
Confidence 334488887766532 3478999998 59999999877 33211 1 111 11 233444443311 0 11
Q ss_pred CCCEEEEEECCCCCeeeecCCC-CeeEEeCCcceEEECceEEEEeeccccc-----------------------------
Q 045675 177 YDAIAEVYSTSTGKWKEVAAGT-GSCVIYGGQDAVAVKGVLHWIANGIGVL----------------------------- 226 (382)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~~~~-~~~~~~~~~~~v~~~G~lywl~~~~~~~----------------------------- 226 (382)
....+++|++.+++|+.++.++ ..+.. +.++.++|++|.+++.....
T Consensus 84 ~~~~v~~yd~~~~~W~~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 84 VFNDVHKYNPKTNSWVKLMSHAPMGMAG---HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp ECCCEEEEETTTTEEEECSCCCSSCCSS---EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred eeccEEEEeCCCCcEEECCCCCCccccc---ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 2358999999999999998875 33322 46677999999999864211
Q ss_pred ----ccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEEC--CCCC-eeEEE
Q 045675 227 ----VNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMN--EGKG-WTRTF 298 (382)
Q Consensus 227 ----~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~--~~~~-W~~~~ 298 (382)
.....+.+||+.+++|+.+ ++|.... ....++..+++|++++.. ... ....-++|.++ .... |+++.
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~-~~~~~~~~~~~iyv~GG~--~~~--~~~~~~v~~~d~d~~~~~W~~~~ 235 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWYGT-AGAAVVNKGDKTWLINGE--AKP--GLRTDAVFELDFTGNNLKWNKLA 235 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSCCC-BSCEEEEETTEEEEECCE--EET--TEECCCEEEEECC---CEEEECC
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCCCc-ccccEEEECCEEEEEeee--cCC--CcccCceEEEEecCCCCcEEecC
Confidence 0125899999999999998 5665431 236777889999999875 210 11123455543 2323 99887
Q ss_pred EeecCC-cccceEEeeCCcEEEEEc------------------------CeEEEEeCCCCcEEEEeeeCCCCCeEEEEEE
Q 045675 299 NTAFER-IAWPVGSFRDSKIIMKSV------------------------DQFFLFNPKTKRNFILPIDSGMGYSYKVFTY 353 (382)
Q Consensus 299 ~i~~~~-~~~~~~~~~~g~l~l~~~------------------------~~~~~yd~~t~~~~~v~~~~~~~~~~~~~~y 353 (382)
.++... ......+..++.|++... ..+.+||+++++|+++...........+..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 236 PVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW 315 (357)
T ss_dssp CSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE
T ss_pred CCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe
Confidence 664332 122223444667777664 1578999999999999643322223444555
Q ss_pred eeceeecCCCC
Q 045675 354 VDSIVAVNGEN 364 (382)
Q Consensus 354 ~~SLv~~~~~~ 364 (382)
...|.-+.+.+
T Consensus 316 ~~~i~v~GG~~ 326 (357)
T 2uvk_A 316 NNSLLIIGGET 326 (357)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEeeeC
Confidence 55666555544
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.18 E-value=1.5e-09 Score=109.37 Aligned_cols=217 Identities=9% Similarity=0.098 Sum_probs=136.9
Q ss_pred cCceEEEeeCCC--CceeEEEEcccccceeccC-CC-----CCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCC
Q 045675 107 CNGLLCLDVSSA--FGMAFVLWNPATNEFKGLP-TP-----SLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYD 178 (382)
Q Consensus 107 ~~Gll~~~~~~~--~~~~~~V~NP~T~~~~~LP-~~-----~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 178 (382)
.+|.|++..+.+ ....++++||.|++|..++ +. +..+ ..++.......+...|++.........
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R--------~~hs~~~~~~~~~lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR--------MCHTFTTISRNNQLLLIGGRKAPHQGL 467 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC--------BSCEEEEETTTTEEEEECCBSSTTCBC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc--------cceEEEEEccCCEEEEEcCCCCCCCcc
Confidence 577777665531 2457899999999999998 52 2211 111222221122333333222111123
Q ss_pred CEEEEEECCCCCeeeecCCCCeeEEeCCcceEEE-CceEEEEeecccccccccEEEEEECCCceeeEeC----CCCCCCC
Q 045675 179 AIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV-KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTA----MPELPTD 253 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~----~P~~~~~ 253 (382)
..+++|+..+++|+.++.++.++.. +.++.+ +|++|.+++..... .+..||+.+++|+.+. +|..+
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~---h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r-- 538 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFR---HSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNS-- 538 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBS---CEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSC--
T ss_pred ccEEEEeCCCCcEEECCCCCCCccc---ceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcc--
Confidence 5899999999999999887655544 567775 99999998865321 7999999999999985 55544
Q ss_pred CeeeEEEeC---CeEEEEEecCCCccCCCCCeEEEEEECCCCC-----eeEEEEee-cCCcccceEEeeCCcEEEEEc--
Q 045675 254 CYVKALSYD---QSLALAVYPGLGFRSRLSNRFELWVMNEGKG-----WTRTFNTA-FERIAWPVGSFRDSKIIMKSV-- 322 (382)
Q Consensus 254 ~~~~l~~~~---g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-----W~~~~~i~-~~~~~~~~~~~~~g~l~l~~~-- 322 (382)
.....++++ |+|+++++.... +......+.+|.+..... |.++..++ .........+.+++.||+..+
T Consensus 539 ~~~~a~v~~~~~~~iyv~GG~~~~-~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 539 LVSAGLEFDPVSKQGIILGGGFMD-QTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CBSCEEEEETTTTEEEEECCBCTT-SSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred cceeEEEEeCCCCEEEEECCcCCC-CCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 233334444 899999886111 011245677777776631 88887754 222233344444377877664
Q ss_pred --------CeEEEEeCCCCcEEEEeee
Q 045675 323 --------DQFFLFNPKTKRNFILPID 341 (382)
Q Consensus 323 --------~~~~~yd~~t~~~~~v~~~ 341 (382)
+.+..||+++++|+.+.+.
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 1699999999999976553
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.18 E-value=2.6e-09 Score=98.89 Aligned_cols=223 Identities=13% Similarity=0.058 Sum_probs=133.2
Q ss_pred eeeccCceEEEeeCC-C-------CceeEEEEcccccceeccCCCC-CccccccceeEEEEEEEeeCCCCCeEEEEEEee
Q 045675 103 IVGSCNGLLCLDVSS-A-------FGMAFVLWNPATNEFKGLPTPS-LTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNF 173 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~-~-------~~~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~ 173 (382)
..+..+|.|++..+. . ....++++||.|++|..+++++ ..... . .... ..+...|++....
T Consensus 60 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~------~--~~~~--~~~~iyv~GG~~~ 129 (357)
T 2uvk_A 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG------H--VTFV--HNGKAYVTGGVNQ 129 (357)
T ss_dssp EEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS------E--EEEE--ETTEEEEEECCCH
T ss_pred eEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc------c--eEEE--ECCEEEEEeCcCC
Confidence 344557887766543 1 1356899999999999998876 32111 1 1111 1233333333221
Q ss_pred cC---------------------------------CCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEe
Q 045675 174 QA---------------------------------RYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIA 220 (382)
Q Consensus 174 ~~---------------------------------~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~ 220 (382)
.. .....+++|+..+++|+.++.++..... . +.++.++|.+|.++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~-~-~~~~~~~~~iyv~G 207 (357)
T 2uvk_A 130 NIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA-G-AAVVNKGDKTWLIN 207 (357)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCB-S-CEEEEETTEEEEEC
T ss_pred CcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcc-c-ccEEEECCEEEEEe
Confidence 00 1235899999999999999776532211 1 47888999999998
Q ss_pred ecccccccccEEEEEEC--CCceeeEe-CCCCCCCCCeeeEEEeCCeEEEEEecCCCcc--------------CCCCCeE
Q 045675 221 NGIGVLVNEKFVVSYDM--NLELFWRT-AMPELPTDCYVKALSYDQSLALAVYPGLGFR--------------SRLSNRF 283 (382)
Q Consensus 221 ~~~~~~~~~~~i~~fD~--~~~~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~--------------~~~~~~~ 283 (382)
+..........+..||+ .+++|+.+ .+|.........++..+|+|++++.. ... ......-
T Consensus 208 G~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~--~~~~~~~~~~~g~~~~~~~~~~~~ 285 (357)
T 2uvk_A 208 GEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGA--GFKGSRENYQNGKNYAHEGLKKSY 285 (357)
T ss_dssp CEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCE--ECTTHHHHHHTTCSSTTTTCCCEE
T ss_pred eecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCc--cccCCcccccccceecccccccee
Confidence 75422112346777876 89999998 44443322345578899999999885 110 0011123
Q ss_pred EEEEECCCC-CeeEEEEeecCCcccceEEeeCCcEEEEEcC--------eEEEEeCCCCcEEEEee
Q 045675 284 ELWVMNEGK-GWTRTFNTAFERIAWPVGSFRDSKIIMKSVD--------QFFLFNPKTKRNFILPI 340 (382)
Q Consensus 284 ~iW~l~~~~-~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~--------~~~~yd~~t~~~~~v~~ 340 (382)
.+|.++-.. .|+++..++..... ..++..++.|++.... .++.|++++++|.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY-GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS-SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCccc-ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 455555432 49999877654433 3334446777766641 68899999999988753
No 16
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.14 E-value=2.6e-11 Score=79.07 Aligned_cols=46 Identities=17% Similarity=0.292 Sum_probs=39.4
Q ss_pred CCCCCCCCCHHHHHHHHhcCChhhhhhhhccchhhHhhcCCHHHHH
Q 045675 5 DTTTVSSVPLVIITDILLQLPIKSIVRFKCVSKSWLLLIKSSEFVT 50 (382)
Q Consensus 5 ~~~~~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~sp~F~~ 50 (382)
+...+..||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 4567899999999999999999999999999999999999988743
No 17
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.08 E-value=7.2e-11 Score=104.49 Aligned_cols=51 Identities=16% Similarity=0.316 Sum_probs=47.6
Q ss_pred CCCCCCCCHHHHHHHHhcCChhhhh-hhhccchhhHhhcCCHHHHHHHHccC
Q 045675 6 TTTVSSVPLVIITDILLQLPIKSIV-RFKCVSKSWLLLIKSSEFVTAHLNCS 56 (382)
Q Consensus 6 ~~~~~~LP~dll~~IL~rLp~~sl~-r~r~VcK~W~~li~sp~F~~~~~~~~ 56 (382)
...+..||+||+.+||+|||+++|+ ||++|||+|+.++++|.|.+.++.+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 3577899999999999999999999 99999999999999999999988775
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.97 E-value=3.4e-06 Score=80.24 Aligned_cols=43 Identities=23% Similarity=0.416 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHHhcCChhhhhhhhccchhhHhhcCC-HHHHHH
Q 045675 9 VSSVPLVIITDILLQLPIKSIVRFKCVSKSWLLLIKS-SEFVTA 51 (382)
Q Consensus 9 ~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~s-p~F~~~ 51 (382)
+..||+|++.+||+.||+++|.++.+|||+|+.++.+ +..-+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4579999999999999999999999999999999998 665444
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.85 E-value=3.6e-08 Score=98.90 Aligned_cols=217 Identities=12% Similarity=0.011 Sum_probs=129.8
Q ss_pred CceEEEeeCCCC---------ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCC
Q 045675 108 NGLLCLDVSSAF---------GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYD 178 (382)
Q Consensus 108 ~Gll~~~~~~~~---------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 178 (382)
+|.|++..+... ...+.++||.|++|..++.++..+.. ...+..+.. .+. ++.+... ..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~------~~~~~~~~~-~g~--lyv~GG~---~~ 264 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM------FCPGISMDG-NGQ--IVVTGGN---DA 264 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC------SSCEEEECT-TSC--EEEECSS---ST
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC------ccccccCCC-CCC--EEEeCCC---CC
Confidence 788877643210 23688999999999998876543221 111222221 122 3333221 22
Q ss_pred CEEEEEECCCCCeeeecCCCCeeEEeCCcceEEE-CceEEEEeecccccccccEEEEEECCCceeeEeC------CCCCC
Q 045675 179 AIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV-KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTA------MPELP 251 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~------~P~~~ 251 (382)
..+++|++.+++|.+++.++..+.. +.++.+ +|++|.+++..........+..||+.+++|+.++ +|...
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~---~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGY---QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSS---CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC
T ss_pred CceEEecCcCCceeECCCCCccccc---cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc
Confidence 3799999999999999877554433 466777 9999999984322113357899999999999862 33221
Q ss_pred C-------CC-----------------------------------------------eeeEEE----eCCeEEEEEecCC
Q 045675 252 T-------DC-----------------------------------------------YVKALS----YDQSLALAVYPGL 273 (382)
Q Consensus 252 ~-------~~-----------------------------------------------~~~l~~----~~g~L~~~~~~~~ 273 (382)
. +. ....++ .+|+|++++....
T Consensus 342 ~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 342 KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 0 00 011222 3789998887511
Q ss_pred CccCCCCC-eEEEEEECCCC-CeeEEE--EeecCCcccceEEeeCCcEEEEEc-------------CeEEEEeCCCCcEE
Q 045675 274 GFRSRLSN-RFELWVMNEGK-GWTRTF--NTAFERIAWPVGSFRDSKIIMKSV-------------DQFFLFNPKTKRNF 336 (382)
Q Consensus 274 ~~~~~~~~-~~~iW~l~~~~-~W~~~~--~i~~~~~~~~~~~~~~g~l~l~~~-------------~~~~~yd~~t~~~~ 336 (382)
..+..... ...|+..+... .|.++. .|+.........+..+|.||+... ..+.+||+++++|+
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~ 501 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY 501 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE
T ss_pred CCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCcee
Confidence 10001112 22455555432 398876 565544334444445778877664 16899999999999
Q ss_pred EEe
Q 045675 337 ILP 339 (382)
Q Consensus 337 ~v~ 339 (382)
.+.
T Consensus 502 ~~~ 504 (656)
T 1k3i_A 502 KQN 504 (656)
T ss_dssp ECC
T ss_pred ecC
Confidence 885
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.83 E-value=3.9e-06 Score=79.55 Aligned_cols=281 Identities=12% Similarity=0.120 Sum_probs=142.1
Q ss_pred CCCCCCCHHHHHHHHhcCChhhhhhhhccchhhHhhcCCHHHHHHHHccCCCc-eeeEEE--eecc-CCCCceeeeeecC
Q 045675 7 TTVSSVPLVIITDILLQLPIKSIVRFKCVSKSWLLLIKSSEFVTAHLNCSIRN-HSLIVR--YYNH-AFGNDSGLMLLRS 82 (382)
Q Consensus 7 ~~~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~sp~F~~~~~~~~~~~-~~~~~~--~~~~-~~~~~~~~~~~~~ 82 (382)
-.+..||+|++..||+.|++++|.++.+|||+|+.++.++.+-+......... ...... .... .....|.......
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~ 96 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQ 96 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhh
Confidence 35678999999999999999999999999999999999998877655432111 000000 0000 0000000000000
Q ss_pred ---CCcce--eecCCC-CCCCCCC-CeeeeccCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEE
Q 045675 83 ---DLKQH--QVELPP-LEGLSTF-PKIVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSL 154 (382)
Q Consensus 83 ---~~~~~--~~~~p~-~~~~~~~-~~~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~ 154 (382)
...+. ...... ....... ...+...+.+|+.... ...+.|||..+++... ++.... ...
T Consensus 97 ~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~---dg~i~vwd~~~~~~~~~~~~h~~----------~v~ 163 (445)
T 2ovr_B 97 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSD---DNTLKVWSAVTGKCLRTLVGHTG----------GVW 163 (445)
T ss_dssp HHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEET---TSCEEEEETTTCCEEEECCCCSS----------CEE
T ss_pred hhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEEC---CCcEEEEECCCCcEEEEEcCCCC----------CEE
Confidence 00000 000000 0011111 1223334555554444 5689999998887543 332111 122
Q ss_pred EEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEE
Q 045675 155 GFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVS 234 (382)
Q Consensus 155 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~ 234 (382)
.+.+++ .+-+.+ . .+..+.+++..++.-...-.... ... .++..+|.....+..+ ..|..
T Consensus 164 ~~~~~~---~~l~s~--~----~dg~i~vwd~~~~~~~~~~~~h~-~~v----~~~~~~~~~l~s~s~d------g~i~~ 223 (445)
T 2ovr_B 164 SSQMRD---NIIISG--S----TDRTLKVWNAETGECIHTLYGHT-STV----RCMHLHEKRVVSGSRD------ATLRV 223 (445)
T ss_dssp EEEEET---TEEEEE--E----TTSCEEEEETTTTEEEEEECCCS-SCE----EEEEEETTEEEEEETT------SEEEE
T ss_pred EEEecC---CEEEEE--e----CCCeEEEEECCcCcEEEEECCCC-CcE----EEEEecCCEEEEEeCC------CEEEE
Confidence 444442 332222 1 33578899988763221111100 111 2334445544444333 48899
Q ss_pred EECCCceeeE-eCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC-CcccceEEe
Q 045675 235 YDMNLELFWR-TAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE-RIAWPVGSF 312 (382)
Q Consensus 235 fD~~~~~~~~-i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~-~~~~~~~~~ 312 (382)
+|+.+.+... +.... ........+|.+.++... ...+.+|.+... ..+..+... .....+.+
T Consensus 224 wd~~~~~~~~~~~~~~----~~v~~~~~~~~~l~~~~~--------dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~- 287 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHV----AAVRCVQYDGRRVVSGAY--------DFMVKVWDPETE---TCLHTLQGHTNRVYSLQF- 287 (445)
T ss_dssp EESSSCCEEEEEECCS----SCEEEEEECSSCEEEEET--------TSCEEEEEGGGT---EEEEEECCCSSCEEEEEE-
T ss_pred EECCCCcEEEEEcCCc----ccEEEEEECCCEEEEEcC--------CCEEEEEECCCC---cEeEEecCCCCceEEEEE-
Confidence 9998765433 22211 122223347776666654 678899987765 334444311 11222222
Q ss_pred eCCc-EEEEEcC-eEEEEeCCCCcEEE
Q 045675 313 RDSK-IIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 313 ~~g~-l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
++. ++....+ .+.+||+++++...
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred -CCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 455 4444444 89999998887543
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.71 E-value=2.3e-06 Score=80.96 Aligned_cols=45 Identities=22% Similarity=0.357 Sum_probs=39.9
Q ss_pred CCCCCHH----HHHHHHhcCChhhhhhhhccchhhHhhcCCHHHHHHHH
Q 045675 9 VSSVPLV----IITDILLQLPIKSIVRFKCVSKSWLLLIKSSEFVTAHL 53 (382)
Q Consensus 9 ~~~LP~d----ll~~IL~rLp~~sl~r~r~VcK~W~~li~sp~F~~~~~ 53 (382)
+..||+| |+..||+.|++++|.++.+|||+|+.++.++.+-+...
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~ 59 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLI 59 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 4569999 99999999999999999999999999999877666543
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.64 E-value=6.9e-07 Score=89.98 Aligned_cols=174 Identities=10% Similarity=-0.035 Sum_probs=115.2
Q ss_pred CCCEEEEEECCCCCeeeec-C-----CCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEe-CC
Q 045675 177 YDAIAEVYSTSTGKWKEVA-A-----GTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AM 247 (382)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~-~-----~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~ 247 (382)
....+.+|+..+++|+.++ . ++..+.. +.++.+ +|.+|.+++..........+..||+.+++|+.+ ++
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~---hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC---HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL 486 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS---CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCccccc---eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC
Confidence 3457999999999999988 4 2333333 688888 999999998654322245689999999999998 56
Q ss_pred CCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEE---eecCCcccceEEee-C-CcEEEE
Q 045675 248 PELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFN---TAFERIAWPVGSFR-D-SKIIMK 320 (382)
Q Consensus 248 P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~---i~~~~~~~~~~~~~-~-g~l~l~ 320 (382)
|..+ .....+.. +|+|+++++. . ... .+|.++-... |+.+.. ++.........+.+ + +.||+.
T Consensus 487 p~~R--~~h~~~~~~~~~iyv~GG~--~-----~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 487 SHTR--FRHSACSLPDGNVLILGGV--T-----EGP-AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp SBCC--BSCEEEECTTSCEEEECCB--C-----SSC-SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCCc--ccceEEEEcCCEEEEECCC--C-----CCC-CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 6554 44556664 9999999987 3 111 6677665433 998865 44333333323323 2 557766
Q ss_pred Ec---------CeEEEEeCCCCc------EEEEeee-CCCCCeEEEEEEe-eceeecCCC
Q 045675 321 SV---------DQFFLFNPKTKR------NFILPID-SGMGYSYKVFTYV-DSIVAVNGE 363 (382)
Q Consensus 321 ~~---------~~~~~yd~~t~~------~~~v~~~-~~~~~~~~~~~y~-~SLv~~~~~ 363 (382)
.+ +.+..||+++++ |+.+... ....+...+..+. ..|.-+++.
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 53 169999999999 8888542 1122234555666 566666553
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=3e-07 Score=92.22 Aligned_cols=195 Identities=8% Similarity=0.015 Sum_probs=114.0
Q ss_pred EEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecC-C----CCCEEEEEECCCCCeeeecCC
Q 045675 123 FVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQA-R----YDAIAEVYSTSTGKWKEVAAG 197 (382)
Q Consensus 123 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~-~----~~~~~~vyss~t~~W~~~~~~ 197 (382)
+..+||.+++|..++++|.... ...+.+..+...|++...... . ....+.+|+..+++|+....+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~~----------~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~ 237 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVPA----------AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT 237 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCCS----------EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE
T ss_pred cccCCCCCCeeeeeccCCCCce----------eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc
Confidence 3446899999998877765321 122233233333333322100 0 113789999999999988766
Q ss_pred CCeeEEeCCcc-eEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEe-CCeEEEEEecCCC
Q 045675 198 TGSCVIYGGQD-AVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSY-DQSLALAVYPGLG 274 (382)
Q Consensus 198 ~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~ 274 (382)
+..... .... ++..+|++|.+++... ..+..||+.+++|..+ ++|..+ .....+.+ +|+|++++.. .
T Consensus 238 ~~~~~~-~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R--~~~s~~~~~dg~iyv~GG~--~ 307 (656)
T 1k3i_A 238 VTKHDM-FCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVAR--GYQSSATMSDGRVFTIGGS--W 307 (656)
T ss_dssp ECSCCC-SSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCC--SSCEEEECTTSCEEEECCC--C
T ss_pred CCCCCC-ccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccc--cccceEEecCCeEEEEeCc--c
Confidence 332211 1112 3346899999988652 3699999999999998 556554 45667777 9999999984 2
Q ss_pred ccCCCCCeEEEEEECCCCCeeEEEE-----eecCCc-------ccceEE-eeCCcEEEEEc-CeEEEEeCCCCcEEEE
Q 045675 275 FRSRLSNRFELWVMNEGKGWTRTFN-----TAFERI-------AWPVGS-FRDSKIIMKSV-DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~W~~~~~-----i~~~~~-------~~~~~~-~~~g~l~l~~~-~~~~~yd~~t~~~~~v 338 (382)
.+......+++|-.... .|+.+.. ++.... .....+ ..+|.++.... +.+..||+++++|...
T Consensus 308 ~~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~ 384 (656)
T 1k3i_A 308 SGGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKS 384 (656)
T ss_dssp CSSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEE
T ss_pred cCCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeec
Confidence 21123456677666543 5998632 211110 001111 11233332222 2789999999997754
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.01 E-value=1.9e-06 Score=75.40 Aligned_cols=51 Identities=14% Similarity=0.213 Sum_probs=46.8
Q ss_pred CCCCCCHHHHHHHHhcCChhhhhhhhccchhhHhhcCCHHHHHHHHccCCC
Q 045675 8 TVSSVPLVIITDILLQLPIKSIVRFKCVSKSWLLLIKSSEFVTAHLNCSIR 58 (382)
Q Consensus 8 ~~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~sp~F~~~~~~~~~~ 58 (382)
.+..||+|++..||+.|++++|.|+.+|||+||.+.+++..-+.++.+..+
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 466899999999999999999999999999999999999999988887643
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.61 E-value=2.6e-05 Score=71.02 Aligned_cols=44 Identities=18% Similarity=0.325 Sum_probs=38.6
Q ss_pred CCCCCCCCCHHHHHHHHhcCChhhhhhhhccchhhHhhcCCHHH
Q 045675 5 DTTTVSSVPLVIITDILLQLPIKSIVRFKCVSKSWLLLIKSSEF 48 (382)
Q Consensus 5 ~~~~~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~sp~F 48 (382)
+...|..||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 34678999999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.02 E-value=0.00026 Score=69.64 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=29.5
Q ss_pred CCCCCCCHHHHHHHHhcCC-hhhhhhhhccchhhHhh
Q 045675 7 TTVSSVPLVIITDILLQLP-IKSIVRFKCVSKSWLLL 42 (382)
Q Consensus 7 ~~~~~LP~dll~~IL~rLp-~~sl~r~r~VcK~W~~l 42 (382)
-.++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4578999999999999999 99999999999999988
No 27
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.61 E-value=0.16 Score=43.99 Aligned_cols=191 Identities=8% Similarity=-0.011 Sum_probs=98.2
Q ss_pred eeeccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEE
Q 045675 103 IVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAE 182 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 182 (382)
+.-..+|.|.+.... ...++++|| +++...+..+.... ...++.+|+... ..+ . . .....+.
T Consensus 104 i~~~~~g~l~v~~~~--~~~i~~~d~-~g~~~~~~~~~~~~--------~~~~i~~~~~g~-l~v--~-~---~~~~~i~ 165 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMN--GNRIGRITD-DGKIREYELPNKGS--------YPSFITLGSDNA-LWF--T-E---NQNNAIG 165 (299)
T ss_dssp EEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSSTTC--------CEEEEEECTTSC-EEE--E-E---TTTTEEE
T ss_pred eEECCCCCEEEEecC--CceEEEECC-CCCEEEecCCCCCC--------CCceEEEcCCCC-EEE--E-e---CCCCEEE
Confidence 333446777665532 347889999 77665543221110 133666776542 211 1 1 1224677
Q ss_pred EEECCCCCeeeecCCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE
Q 045675 183 VYSTSTGKWKEVAAGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS 260 (382)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~ 260 (382)
+|+. ++............. ..++.+ +|.+|+..... ..|..||+ +.++..+.+|.... ....+..
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~ 232 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASG----PVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIPTPNA-RPHAITA 232 (299)
T ss_dssp EECT-TCCEEEEECSSTTCC----EEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC-CEEEEEE
T ss_pred EEcC-CCcEEEeeCCCCCCc----ceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECCCCCC-CceeEEE
Confidence 7877 666655322211000 122333 57876544322 48999999 77777776653221 2334444
Q ss_pred -eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC-CcccceEEeeCCcEEEEEc-CeEEEEeCCCCcEE
Q 045675 261 -YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE-RIAWPVGSFRDSKIIMKSV-DQFFLFNPKTKRNF 336 (382)
Q Consensus 261 -~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~-~~~~~~~~~~~g~l~l~~~-~~~~~yd~~t~~~~ 336 (382)
-+|.|++.... ...+.+|.. . +=...+.++.. .....+.+ .+|.|++... +.+..||+++++++
T Consensus 233 ~~~g~l~v~~~~--------~~~i~~~d~--~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 233 GAGIDLWFTEWG--------ANKIGRLTS--N-NIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp CSTTCEEEEETT--------TTEEEEEET--T-TEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred CCCCCEEEeccC--------CceEEEECC--C-CceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 36788776643 455665554 2 31112222211 11333445 6778888874 49999999887653
No 28
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.58 E-value=0.00078 Score=66.19 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=31.8
Q ss_pred CCCCCHHHHHHHHhcC-ChhhhhhhhccchhhHhh
Q 045675 9 VSSVPLVIITDILLQL-PIKSIVRFKCVSKSWLLL 42 (382)
Q Consensus 9 ~~~LP~dll~~IL~rL-p~~sl~r~r~VcK~W~~l 42 (382)
...||||++.+||++| |.+++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3479999999999999 899999999999999987
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.24 E-value=0.44 Score=43.19 Aligned_cols=188 Identities=10% Similarity=-0.000 Sum_probs=98.4
Q ss_pred eEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC
Q 045675 110 LLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG 189 (382)
Q Consensus 110 ll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~ 189 (382)
++++.... ...+.+||..+++....-.... ...++.+++... +-++.. . .+..+.+++..++
T Consensus 3 ~l~vs~~~--d~~v~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~-~l~~~~-~----~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 3 FAYIANSE--SDNISVIDVTSNKVTATIPVGS----------NPMGAVISPDGT-KVYVAN-A----HSNDVSIIDTATN 64 (391)
T ss_dssp EEEEEETT--TTEEEEEETTTTEEEEEEECSS----------SEEEEEECTTSS-EEEEEE-G----GGTEEEEEETTTT
T ss_pred EEEEEcCC--CCEEEEEECCCCeEEEEeecCC----------CcceEEECCCCC-EEEEEC-C----CCCeEEEEECCCC
Confidence 44444443 5589999999887654221111 123566666543 222221 1 2348899998877
Q ss_pred CeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEE-eCCeEEE
Q 045675 190 KWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALS-YDQSLAL 267 (382)
Q Consensus 190 ~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~-~~g~L~~ 267 (382)
.-...-.... ... .-...-+|...++++.. ...|..+|+.+.+.... .... ....+.. -+|+..+
T Consensus 65 ~~~~~~~~~~-~v~---~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 65 NVIATVPAGS-SPQ---GVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLY 131 (391)
T ss_dssp EEEEEEECSS-SEE---EEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEE
T ss_pred eEEEEEECCC-Ccc---ceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEE
Confidence 5432211111 111 01122246544444332 24799999998766433 3222 2233333 3566443
Q ss_pred EEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC--eEEEEeCCCCcEEEE
Q 045675 268 AVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD--QFFLFNPKTKRNFIL 338 (382)
Q Consensus 268 ~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t~~~~~v 338 (382)
+... ....+.+|.+... ..+..+....-...+.+..+|. |++.... .+..||+++++....
T Consensus 132 ~~~~-------~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 132 VTNN-------GDKTVSVINTVTK---AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp EEET-------TTTEEEEEETTTT---EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeC-------CCCEEEEEECCCC---cEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 3443 2678999987765 2333333332234455566676 4455433 899999998875543
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.10 E-value=0.73 Score=41.69 Aligned_cols=190 Identities=12% Similarity=0.027 Sum_probs=100.2
Q ss_pred ceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC
Q 045675 109 GLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST 188 (382)
Q Consensus 109 Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t 188 (382)
..|++.... ...+.+||+.+++....-.... ...++.+++..+ +.++.. .....+.+|+..+
T Consensus 86 ~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~-~l~~~~-----~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 86 KQVYVTNMA--SSTLSVIDTTSNTVAGTVKTGK----------SPLGLALSPDGK-KLYVTN-----NGDKTVSVINTVT 147 (391)
T ss_dssp SEEEEEETT--TTEEEEEETTTTEEEEEEECSS----------SEEEEEECTTSS-EEEEEE-----TTTTEEEEEETTT
T ss_pred CEEEEEECC--CCEEEEEECCCCeEEEEEeCCC----------CcceEEECCCCC-EEEEEe-----CCCCEEEEEECCC
Confidence 344444432 4589999999987654322221 123566766543 322221 1345899999888
Q ss_pred CCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEE-eCCeEE
Q 045675 189 GKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALS-YDQSLA 266 (382)
Q Consensus 189 ~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~-~~g~L~ 266 (382)
++....-.... ... .-...-+|...++.... ...|..+|+.+.+.... .... ....+.. -+|+..
T Consensus 148 ~~~~~~~~~~~-~~~---~~~~~~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l 214 (391)
T 1l0q_A 148 KAVINTVSVGR-SPK---GIAVTPDGTKVYVANFD-----SMSISVIDTVTNSVIDTVKVEA----APSGIAVNPEGTKA 214 (391)
T ss_dssp TEEEEEEECCS-SEE---EEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECSS----EEEEEEECTTSSEE
T ss_pred CcEEEEEecCC-Ccc---eEEECCCCCEEEEEeCC-----CCEEEEEECCCCeEEEEEecCC----CccceEECCCCCEE
Confidence 75443221110 001 11222356544444433 24799999988765433 2211 1222332 255544
Q ss_pred EEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEc-C-eEEEEeCCCCcEEE
Q 045675 267 LAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSV-D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~-~-~~~~yd~~t~~~~~ 337 (382)
++... . .....+.+|.++.. ..+..++...-...+.+..+|+ |++... + .+.+||+++++...
T Consensus 215 ~~~~~--~---~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 215 YVTNV--D---KYFNTVSMIDTGTN---KITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp EEEEE--C---SSCCEEEEEETTTT---EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEec--C---cCCCcEEEEECCCC---eEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 43332 0 02678889988765 4445554433233355566776 545544 3 89999999987654
No 31
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.82 E-value=0.88 Score=41.80 Aligned_cols=196 Identities=12% Similarity=0.032 Sum_probs=103.0
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+.+|.+++.... ...+.+||+.+++... ++.... ...++.+++..+ +.++.. .....+.+|
T Consensus 178 ~~~~~~~~s~~~--d~~v~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~l~~~~-----~~~~~i~~~ 239 (433)
T 3bws_A 178 PEHNELWVSQMQ--ANAVHVFDLKTLAYKATVDLTGK----------WSKILLYDPIRD-LVYCSN-----WISEDISVI 239 (433)
T ss_dssp GGGTEEEEEEGG--GTEEEEEETTTCCEEEEEECSSS----------SEEEEEEETTTT-EEEEEE-----TTTTEEEEE
T ss_pred cCCCEEEEEECC--CCEEEEEECCCceEEEEEcCCCC----------CeeEEEEcCCCC-EEEEEe-----cCCCcEEEE
Confidence 345655554442 4578999988866443 332111 133566777543 222221 123479999
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccc--cccEEEEEECCCceeeEe-CCCCCCCCCeeeEEE-
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLV--NEKFVVSYDMNLELFWRT-AMPELPTDCYVKALS- 260 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~--~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~- 260 (382)
+..++.....-..... .. .-.+.-+|...+.+..+.... ....|..+|+.+.+.... ..+. ....+..
T Consensus 240 d~~~~~~~~~~~~~~~-~~---~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~~~~~~ 311 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGL-PR---GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG----NKRHIVSG 311 (433)
T ss_dssp ETTTTEEEEECCCCSE-EE---EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE----CEEEEEEC
T ss_pred ECCCCcEEEEecCCCC-ce---EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC----CcceEEEC
Confidence 9887754332221111 11 112223565555555321100 134888999987755433 2121 1122222
Q ss_pred eCCe-EEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC---------------
Q 045675 261 YDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD--------------- 323 (382)
Q Consensus 261 ~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~--------------- 323 (382)
-+|+ |++.... ...+.+|.++.. ..+..++...-...+.+..+|. |++...+
T Consensus 312 ~~g~~l~~~~~~--------~~~v~v~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 312 NTENKIYVSDMC--------CSKIEVYDLKEK---KVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp SSTTEEEEEETT--------TTEEEEEETTTT---EEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSC
T ss_pred CCCCEEEEEecC--------CCEEEEEECCCC---cEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccc
Confidence 2554 5554443 678999988754 3444454333344566666776 5555542
Q ss_pred -eEEEEeCCCCcEEEE
Q 045675 324 -QFFLFNPKTKRNFIL 338 (382)
Q Consensus 324 -~~~~yd~~t~~~~~v 338 (382)
.+..||+++++....
T Consensus 381 g~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 381 GKVYVIDTTTDTVKEF 396 (433)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred eEEEEEECCCCcEEEE
Confidence 799999998875543
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.72 E-value=1 Score=40.04 Aligned_cols=198 Identities=9% Similarity=0.000 Sum_probs=108.0
Q ss_pred CceEEEeeCC-CC-ceeEEEEcccccceec-cCCC--CCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEE
Q 045675 108 NGLLCLDVSS-AF-GMAFVLWNPATNEFKG-LPTP--SLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAE 182 (382)
Q Consensus 108 ~Gll~~~~~~-~~-~~~~~V~NP~T~~~~~-LP~~--~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 182 (382)
+|+..+..+. +. ...+.++||.|++... ++.. ..... . ...++.++. ....+.. . ....+.
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg---~---~~~~i~~~~---~~lyv~~-~----~~~~v~ 67 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLG---D---VAQSMVIRD---GIGWIVV-N----NSHVIF 67 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCB---S---CEEEEEEET---TEEEEEE-G----GGTEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccC---c---cceEEEEEC---CEEEEEE-c----CCCEEE
Confidence 4555555441 11 4589999999998754 2110 00000 0 112344442 2222221 1 234799
Q ss_pred EEECCCCCe-eeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceee-EeCCCCCCC--CCeeeE
Q 045675 183 VYSTSTGKW-KEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELPT--DCYVKA 258 (382)
Q Consensus 183 vyss~t~~W-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~~--~~~~~l 258 (382)
+++..+++- ++++....+. .-++.-+|.+|...... ..|.++|+.+.+.. .++.+.... .....+
T Consensus 68 viD~~t~~~~~~i~~~~~p~-----~i~~~~~g~lyv~~~~~------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 68 AIDINTFKEVGRITGFTSPR-----YIHFLSDEKAYVTQIWD------YRIFIINPKTYEITGYIECPDMDMESGSTEQM 136 (328)
T ss_dssp EEETTTCCEEEEEECCSSEE-----EEEEEETTEEEEEEBSC------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCE
T ss_pred EEECcccEEEEEcCCCCCCc-----EEEEeCCCeEEEEECCC------CeEEEEECCCCeEEEEEEcCCccccCCCcceE
Confidence 999988765 2332221111 11223688888776332 48999999998765 456554110 012234
Q ss_pred EEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEc------------CeEE
Q 045675 259 LSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSV------------DQFF 326 (382)
Q Consensus 259 ~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~------------~~~~ 326 (382)
+..+|+|++.... ....+.++-++.. ..+.+++......-+.+..+|.+++... ..++
T Consensus 137 ~~~~~~lyv~~~~-------~~~~v~viD~~t~---~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 137 VQYGKYVYVNCWS-------YQNRILKIDTETD---KVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp EEETTEEEEEECT-------TCCEEEEEETTTT---EEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred EEECCEEEEEcCC-------CCCEEEEEECCCC---eEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 4478899888652 1456666655544 3334454433233455666788877764 3699
Q ss_pred EEeCCCCcEEE-Eee
Q 045675 327 LFNPKTKRNFI-LPI 340 (382)
Q Consensus 327 ~yd~~t~~~~~-v~~ 340 (382)
.+|++++++.+ +.+
T Consensus 207 ~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 207 RIDAETFTVEKQFKF 221 (328)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCeEEEEEec
Confidence 99999998763 444
No 33
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.47 E-value=1.4 Score=39.76 Aligned_cols=184 Identities=11% Similarity=0.052 Sum_probs=98.8
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.|||..+++....-..... .. ....+.+.|..+.+-+.+- .+..+.+++..+...+.......
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h-----~~--~v~~~~~~~~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~ 161 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGP-----GD--AITGMKFNQFNTNQLFVSS------IRGATTLRDFSGSVIQVFAKTDS 161 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCST-----TC--BEEEEEEETTEEEEEEEEE------TTTEEEEEETTSCEEEEEECCCC
T ss_pred CCeEEEEeCCCcccceeeecCCc-----CC--ceeEEEeCCCCCCEEEEEe------CCCEEEEEECCCCceEEEeccCC
Confidence 44789999988776554322111 11 2345666664333333332 33578999988766555443311
Q ss_pred -eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCe-EEEEEecCCCcc
Q 045675 200 -SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQS-LALAVYPGLGFR 276 (382)
Q Consensus 200 -~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~ 276 (382)
.... . .-...-+|.....+..+ ..|..+|+..+....+..... ....+... +|. +.+....
T Consensus 162 ~~~~v-~-~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~----- 225 (383)
T 3ei3_B 162 WDYWY-C-CVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKA---KVTHAEFNPRCDWLMATSSV----- 225 (383)
T ss_dssp SSCCE-E-EEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSS---CEEEEEECSSCTTEEEEEET-----
T ss_pred CCCCe-E-EEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCC---cEEEEEECCCCCCEEEEEeC-----
Confidence 0111 0 12223355555444433 488899997665555543221 22333322 455 5554443
Q ss_pred CCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEee-CCcEEEEE-cC-eEEEEeCCCCcE
Q 045675 277 SRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFR-DSKIIMKS-VD-QFFLFNPKTKRN 335 (382)
Q Consensus 277 ~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~-~g~l~l~~-~~-~~~~yd~~t~~~ 335 (382)
...+.+|.+..... -..+..+........+.+.. +|..++.. .+ .+.+||+++.+.
T Consensus 226 ---d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 226 ---DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp ---TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred ---CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 67899999886422 23344444333355566666 77755444 34 899999988653
No 34
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.35 E-value=2.8 Score=42.49 Aligned_cols=175 Identities=15% Similarity=0.068 Sum_probs=92.0
Q ss_pred EEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccE
Q 045675 155 GFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKF 231 (382)
Q Consensus 155 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~ 231 (382)
|+++|...+...+.- .....++++++.+..-+.+....... ..++.+ +|.|||..... ...
T Consensus 475 GLAvD~~~~~LY~tD------~~~~~I~v~~ldG~~~~~l~~~~l~~-----P~gIaVDp~~g~LYwtD~g~-----~~~ 538 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTD------SVLGTVSVADTKGVKRKTLFRENGSK-----PRAIVVDPVHGFMYWTDWGT-----PAK 538 (791)
T ss_dssp EEEEETTTTEEEEEE------TTTTEEEEEETTSSSEEEEEECTTCC-----EEEEEEETTTTEEEEEECSS-----SCE
T ss_pred eeeeeecCCcEEEEe------cCCCeEEEEeCCCCeEEEEEeCCCCC-----cceEEEecCCCCEEEecCCC-----CCe
Confidence 677777654322221 13347888888765544432211111 134444 58999987543 248
Q ss_pred EEEEECCCceeeEeCCCCCCCCCeeeEEEe--CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccc
Q 045675 232 VVSYDMNLELFWRTAMPELPTDCYVKALSY--DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWP 308 (382)
Q Consensus 232 i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~ 308 (382)
|.++++....-+.+.. ... .....|++. +|+||++... ...|++..++.. -.++. +.. ..+..|
T Consensus 539 I~~~~~dG~~~~~lv~-~~l-~~P~GLavD~~~~~LYwaD~~--------~~~I~~~d~dG~--~~~~v-~~~~~~l~~P 605 (791)
T 3m0c_C 539 IKKGGLNGVDIYSLVT-ENI-QWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGG--NRKTI-LEDEKRLAHP 605 (791)
T ss_dssp EEEEETTSCCEEEEEC-SSC-SCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSC--SCEEE-EECTTTTSSE
T ss_pred EEEEecCCCceEEEEe-CCC-CCceEEEEecCCCeEEEEeCC--------CCcEEEEecCCC--ceEEE-ecCCCccCCC
Confidence 9999998765544421 111 133445554 7899998764 444444444333 12221 221 234567
Q ss_pred eEEeeCC-cEEEEEcC--eEEEEeCCCCcEEEEeeeCCCCCeEEEEEEeeceee
Q 045675 309 VGSFRDS-KIIMKSVD--QFFLFNPKTKRNFILPIDSGMGYSYKVFTYVDSIVA 359 (382)
Q Consensus 309 ~~~~~~g-~l~l~~~~--~~~~yd~~t~~~~~v~~~~~~~~~~~~~~y~~SLv~ 359 (382)
+++.-.+ .||+.... .|..+|..+++-..+-..+ ...-+.+.+|.+..-|
T Consensus 606 ~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~-l~~P~~i~v~h~~~Qp 658 (791)
T 3m0c_C 606 FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAEN-LLSPEDMVLFHNLTQP 658 (791)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECS-CSCCCCEEEESGGGSC
T ss_pred CEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecC-CCCceeEeeeccccCC
Confidence 6665433 46666654 8999998777533322211 1112445566665544
No 35
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.20 E-value=1.3 Score=37.79 Aligned_cols=114 Identities=11% Similarity=0.060 Sum_probs=74.7
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEE
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELW 286 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW 286 (382)
.-.+.+|.+|.-++..+ ...|..+|+.+.+. ..+++|... ....++..+++|+++... ...+.++
T Consensus 25 GL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~--fgeGi~~~~~~ly~ltw~--------~~~v~v~ 90 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPY--FGAGIVAWRDRLIQLTWR--------NHEGFVY 90 (243)
T ss_dssp EEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESS--------SSEEEEE
T ss_pred cEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCc--ceeEEEEeCCEEEEEEee--------CCEEEEE
Confidence 44456677777655542 24899999998766 556777654 345567779999998654 4555544
Q ss_pred EECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC-eEEEEeCCCCcE-EEEee
Q 045675 287 VMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD-QFFLFNPKTKRN-FILPI 340 (382)
Q Consensus 287 ~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~-~~~~yd~~t~~~-~~v~~ 340 (382)
-.+.. .++.+++... .+.++..++. |++.... ++..+|++|.+. +.+.+
T Consensus 91 D~~tl---~~~~ti~~~~--~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 91 DLATL---TPRARFRYPG--EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp ETTTT---EEEEEEECSS--CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ECCcC---cEEEEEeCCC--CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 44443 6777777654 3455555555 6666554 999999999764 44544
No 36
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.08 E-value=1.4 Score=37.64 Aligned_cols=195 Identities=8% Similarity=-0.049 Sum_probs=101.6
Q ss_pred eccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+..+|.|+..+.. ...+.++++.+++...+-..... ...++.+|+..+...+.- .....+.++
T Consensus 44 d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~---------~p~~ia~d~~~~~lyv~d------~~~~~I~~~ 106 (267)
T 1npe_A 44 DCVDKVVYWTDIS--EPSIGRASLHGGEPTTIIRQDLG---------SPEGIALDHLGRTIFWTD------SQLDRIEVA 106 (267)
T ss_dssp ETTTTEEEEEETT--TTEEEEEESSSCCCEEEECTTCC---------CEEEEEEETTTTEEEEEE------TTTTEEEEE
T ss_pred ecCCCEEEEEECC--CCEEEEEecCCCCcEEEEECCCC---------CccEEEEEecCCeEEEEE------CCCCEEEEE
Confidence 3446777766653 45788888877654333211111 134777887654333221 123477888
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
+.....-+.........+ .++.+ +|.+||...... ...|.++++.......+... .. .....++..
T Consensus 107 ~~~g~~~~~~~~~~~~~P-----~~i~vd~~~g~lyv~~~~~~----~~~I~~~~~dg~~~~~~~~~-~~-~~P~gia~d 175 (267)
T 1npe_A 107 KMDGTQRRVLFDTGLVNP-----RGIVTDPVRGNLYWTDWNRD----NPKIETSHMDGTNRRILAQD-NL-GLPNGLTFD 175 (267)
T ss_dssp ETTSCSCEEEECSSCSSE-----EEEEEETTTTEEEEEECCSS----SCEEEEEETTSCCCEEEECT-TC-SCEEEEEEE
T ss_pred EcCCCCEEEEEECCCCCc-----cEEEEeeCCCEEEEEECCCC----CcEEEEEecCCCCcEEEEEC-CC-CCCcEEEEc
Confidence 876543222211110111 22333 689999875421 24788999876554443211 11 123344443
Q ss_pred --CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEee-CCcEEEEEcC--eEEEEeCCCCcE-
Q 045675 262 --DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFR-DSKIIMKSVD--QFFLFNPKTKRN- 335 (382)
Q Consensus 262 --~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~~~--~~~~yd~~t~~~- 335 (382)
++.|+++... ...+.+..++.. .....++ ....|.++.. ++.||+.... ++..+|+++++.
T Consensus 176 ~~~~~lyv~d~~--------~~~I~~~~~~g~---~~~~~~~--~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 176 AFSSQLCWVDAG--------THRAECLNPAQP---GRRKVLE--GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp TTTTEEEEEETT--------TTEEEEEETTEE---EEEEEEE--CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCEEEEEECC--------CCEEEEEecCCC---ceEEEec--CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCce
Confidence 5678887765 445554444322 1111222 2344555543 4457777654 999999998764
Q ss_pred EEEee
Q 045675 336 FILPI 340 (382)
Q Consensus 336 ~~v~~ 340 (382)
+.+..
T Consensus 243 ~~i~~ 247 (267)
T 1npe_A 243 DTFHP 247 (267)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 44443
No 37
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.02 E-value=2.1 Score=39.30 Aligned_cols=195 Identities=10% Similarity=0.109 Sum_probs=97.0
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
|.+++|.+..+ ..++|||..|++...+-...... . ....+.|.+. +.|-+++- .+..+.+++
T Consensus 114 S~~n~lAvgld----~tV~lWd~~tg~~~~~~~~~~~~----~---~V~sv~fspd-g~~lasgs------~Dg~v~iWd 175 (420)
T 4gga_A 114 SSGNVLAVALD----NSVYLWSASSGDILQLLQMEQPG----E---YISSVAWIKE-GNYLAVGT------SSAEVQLWD 175 (420)
T ss_dssp CTTSEEEEEET----TEEEEEETTTCCEEEEEECCSTT----C---CEEEEEECTT-SSEEEEEE------TTSCEEEEE
T ss_pred CCCCEEEEEeC----CEEEEEECCCCCEEEEEEecCCC----C---cEEEEEECCC-CCEEEEEE------CCCeEEEEE
Confidence 45677755433 38999999999876543322111 1 2345677764 34544432 334789999
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE-EeCCe
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL-SYDQS 264 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~-~~~g~ 264 (382)
..++.-...-.... .. -.++..+|.+...+..+ ..+..+|..+.......+..... ....+. ..+|.
T Consensus 176 ~~~~~~~~~~~~h~-~~----v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~~-~~~~~~~~~~g~ 243 (420)
T 4gga_A 176 VQQQKRLRNMTSHS-AR----VGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGR 243 (420)
T ss_dssp TTTTEEEEEECCCS-SC----EEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSS
T ss_pred cCCCcEEEEEeCCC-Cc----eEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccccc-ceeeeeecCCCC
Confidence 88764221111111 01 13344556554444333 47777887664433222211111 122222 22555
Q ss_pred EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe-ecCCcccceEEeeCC-cEEEE-Ec--C-eEEEEeCCCCcEEE
Q 045675 265 LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT-AFERIAWPVGSFRDS-KIIMK-SV--D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 265 L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i-~~~~~~~~~~~~~~g-~l~l~-~~--~-~~~~yd~~t~~~~~ 337 (382)
+.+.... ...+.||.....+. +..+... .....+..+.+...+ .++.. .. + .+.+||+++++...
T Consensus 244 ~l~s~~~--------D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 244 HLASGGN--------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp EEEEEET--------TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred eeeeeec--------cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 5554444 67888998876533 3222222 111123333333333 34433 22 2 78888888876544
Q ss_pred E
Q 045675 338 L 338 (382)
Q Consensus 338 v 338 (382)
.
T Consensus 316 ~ 316 (420)
T 4gga_A 316 A 316 (420)
T ss_dssp E
T ss_pred e
Confidence 3
No 38
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.88 E-value=1.8 Score=37.90 Aligned_cols=191 Identities=11% Similarity=0.068 Sum_probs=101.9
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
...+.+++.... ...+.++|+.|++....-..+.. .. ++.+++..+ +.++. .. ....+.+++
T Consensus 7 ~~~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~---------~~-~~~~s~dg~-~l~~~-~~----~~~~i~~~d 68 (331)
T 3u4y_A 7 TTSNFGIVVEQH--LRRISFFSTDTLEILNQITLGYD---------FV-DTAITSDCS-NVVVT-SD----FCQTLVQIE 68 (331)
T ss_dssp CCCCEEEEEEGG--GTEEEEEETTTCCEEEEEECCCC---------EE-EEEECSSSC-EEEEE-ES----TTCEEEEEE
T ss_pred CCCCEEEEEecC--CCeEEEEeCcccceeeeEEccCC---------cc-eEEEcCCCC-EEEEE-eC----CCCeEEEEE
Confidence 334555555443 45899999999987553222211 23 677777654 22222 11 234888999
Q ss_pred CCCCCe--eeecCCCCeeEEeCCc-ceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-
Q 045675 186 TSTGKW--KEVAAGTGSCVIYGGQ-DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS- 260 (382)
Q Consensus 186 s~t~~W--~~~~~~~~~~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~- 260 (382)
..++.- +.......+ . . -.+.-+|...+...... ....|..+|+.+.+... ++... ....+..
T Consensus 69 ~~~~~~~~~~~~~~~~~--~---~~~~~s~dg~~l~~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~s 136 (331)
T 3u4y_A 69 TQLEPPKVVAIQEGQSS--M---ADVDITPDDQFAVTVTGLN---HPFNMQSYSFLKNKFISTIPIPY----DAVGIAIS 136 (331)
T ss_dssp CSSSSCEEEEEEECSSC--C---CCEEECTTSSEEEECCCSS---SSCEEEEEETTTTEEEEEEECCT----TEEEEEEC
T ss_pred CCCCceeEEecccCCCC--c---cceEECCCCCEEEEecCCC---CcccEEEEECCCCCeEEEEECCC----CccceEEC
Confidence 887764 111111110 0 1 12223465333333220 11279999998876543 33322 2233443
Q ss_pred eCCe-EEEEEecCCCccCCCCCe-EEEEEECCCCC--eeE-EEEeecCCcccceEEeeCCc-EEEEEcC--eEEEEeCCC
Q 045675 261 YDQS-LALAVYPGLGFRSRLSNR-FELWVMNEGKG--WTR-TFNTAFERIAWPVGSFRDSK-IIMKSVD--QFFLFNPKT 332 (382)
Q Consensus 261 ~~g~-L~~~~~~~~~~~~~~~~~-~~iW~l~~~~~--W~~-~~~i~~~~~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t 332 (382)
-+|+ |++.... ... +.+|.++.. + ... ...++...-...+.+..+|+ +++.... .+.+||+++
T Consensus 137 pdg~~l~~~~~~--------~~~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 137 PNGNGLILIDRS--------SANTVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp TTSSCEEEEEET--------TTTEEEEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEecC--------CCceEEEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3665 5555554 455 999999865 4 222 12222222234455667787 6666643 899999998
Q ss_pred CcE
Q 045675 333 KRN 335 (382)
Q Consensus 333 ~~~ 335 (382)
++.
T Consensus 208 ~~~ 210 (331)
T 3u4y_A 208 PEN 210 (331)
T ss_dssp TTS
T ss_pred Ccc
Confidence 875
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.84 E-value=1.6 Score=37.01 Aligned_cols=192 Identities=10% Similarity=0.051 Sum_probs=96.1
Q ss_pred eeeccCceEEE-eeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEE
Q 045675 103 IVGSCNGLLCL-DVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIA 181 (382)
Q Consensus 103 ~~~s~~Gll~~-~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 181 (382)
+.-+.+|-|.+ .+.. ...+.++|+.+++...++...... ..++.+|+... ..|. . . ...+
T Consensus 29 i~~~~~g~l~v~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~---------p~~i~~~~~g~-l~v~---~--~--~~~i 89 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGM--YGRVVKLATGSTGTTVLPFNGLYQ---------PQGLAVDGAGT-VYVT---D--F--NNRV 89 (270)
T ss_dssp EEECTTCCEEEEECSS--SCEEEEECC-----EECCCCSCCS---------CCCEEECTTCC-EEEE---E--T--TTEE
T ss_pred eEECCCCCEEEEccCC--CCcEEEecCCCcccceEeeCCcCC---------cceeEECCCCC-EEEE---c--C--CCEE
Confidence 33344676666 4332 457889999887766554332111 12566676533 2222 1 1 3478
Q ss_pred EEEECCCCCeeeecCCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE
Q 045675 182 EVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL 259 (382)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~ 259 (382)
.+|+..+..-..........+ .++.+ +|.+|+..... ..|..+|..+.......... . .....++
T Consensus 90 ~~~d~~~~~~~~~~~~~~~~p-----~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~-~-~~p~~i~ 156 (270)
T 1rwi_B 90 VTLAAGSNNQTVLPFDGLNYP-----EGLAVDTQGAVYVADRGN------NRVVKLAAGSKTQTVLPFTG-L-NDPDGVA 156 (270)
T ss_dssp EEECTTCSCCEECCCCSCSSE-----EEEEECTTCCEEEEEGGG------TEEEEECTTCCSCEECCCCS-C-CSCCCEE
T ss_pred EEEeCCCceEeeeecCCcCCC-----cceEECCCCCEEEEECCC------CEEEEEECCCceeEeecccc-C-CCceeEE
Confidence 888877664433321110111 22222 68877654432 47888887765544332111 1 1223344
Q ss_pred Ee-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccc--eEEeeCCcEEEEEcC--eEEEEeCCCCc
Q 045675 260 SY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWP--VGSFRDSKIIMKSVD--QFFLFNPKTKR 334 (382)
Q Consensus 260 ~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~--~~~~~~g~l~l~~~~--~~~~yd~~t~~ 334 (382)
.. +|+|++.... ...+.+|..+.. . ... .....+..| +++..+|.|++.... .+..||++++.
T Consensus 157 ~~~~g~l~v~~~~--------~~~i~~~~~~~~-~--~~~-~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 157 VDNSGNVYVTDTD--------NNRVVKLEAESN-N--QVV-LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp ECTTCCEEEEEGG--------GTEEEEECTTTC-C--EEE-CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred EeCCCCEEEEECC--------CCEEEEEecCCC-c--eEe-ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 43 6888776654 445665554433 1 111 112222333 444456778887753 89999998876
Q ss_pred EEEE
Q 045675 335 NFIL 338 (382)
Q Consensus 335 ~~~v 338 (382)
....
T Consensus 225 ~~~~ 228 (270)
T 1rwi_B 225 STVL 228 (270)
T ss_dssp CEEC
T ss_pred ceee
Confidence 5543
No 40
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.82 E-value=2.1 Score=38.25 Aligned_cols=116 Identities=14% Similarity=0.058 Sum_probs=68.2
Q ss_pred EECceEEEEeecccccccccEEEEEECCCceeeEe----CCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCC-CCeEE
Q 045675 211 AVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT----AMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRL-SNRFE 284 (382)
Q Consensus 211 ~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i----~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~-~~~~~ 284 (382)
.-+|...++.... ...|..||+.+.++..+ ..|.... ....+.. -+|+..++... . ...+.
T Consensus 219 spdg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~-~~~~i~~spdg~~l~v~~~-------~~~~~i~ 285 (361)
T 3scy_A 219 NSDGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQ-GSGDIHLSPDGKYLYASNR-------LKADGVA 285 (361)
T ss_dssp CTTSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCC-CEEEEEECTTSSEEEEEEC-------SSSCEEE
T ss_pred cCCCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCC-CcccEEECCCCCEEEEECC-------CCCCEEE
Confidence 3367644444422 24788888887766544 2232211 2223433 37775444443 2 57899
Q ss_pred EEEECCCCC-eeEEEEeecCCcccceEEeeCCc-EEEEEcC----eEEEEeCCCCcEEEEe
Q 045675 285 LWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSK-IIMKSVD----QFFLFNPKTKRNFILP 339 (382)
Q Consensus 285 iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~----~~~~yd~~t~~~~~v~ 339 (382)
||.++...+ +..+..++......-+.+..+|+ |++...+ .++.+|.++++.+.+.
T Consensus 286 v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 999984334 77777676533344566777887 5555533 4555788899988774
No 41
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.63 E-value=1.5 Score=37.76 Aligned_cols=113 Identities=7% Similarity=0.043 Sum_probs=71.9
Q ss_pred eEEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEE
Q 045675 209 AVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWV 287 (382)
Q Consensus 209 ~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~ 287 (382)
-.+.+|.+|.=++..+ ...|..+|+.+.+. ..+++|... ....+...+++|+++... ...+.++-
T Consensus 48 L~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~~g~~ly~ltw~--------~~~v~v~D 113 (262)
T 3nol_A 48 FFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRY--FGEGISDWKDKIVGLTWK--------NGLGFVWN 113 (262)
T ss_dssp EEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESS--------SSEEEEEE
T ss_pred EEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCcc--ceeEEEEeCCEEEEEEee--------CCEEEEEE
Confidence 3455787777665542 24899999998766 555776543 334467788999988765 45555444
Q ss_pred ECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC-eEEEEeCCCCcEE-EEee
Q 045675 288 MNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD-QFFLFNPKTKRNF-ILPI 340 (382)
Q Consensus 288 l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~-~~~~yd~~t~~~~-~v~~ 340 (382)
.+.. ..+.+|+... ...++..++. |++.... ++..+|++|.+.. .+.+
T Consensus 114 ~~t~---~~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 114 IRNL---RQVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TTTC---CEEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred CccC---cEEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 4443 6677777644 3344445555 5555434 8999999987644 4544
No 42
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.50 E-value=2.1 Score=36.78 Aligned_cols=193 Identities=13% Similarity=0.082 Sum_probs=100.5
Q ss_pred eeeccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEE
Q 045675 103 IVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAE 182 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 182 (382)
+....+|-+.+.... ...++++||. ++...++.+.... ...++.+|+.. ...|. . .....+.
T Consensus 67 i~~~~~g~l~v~~~~--~~~v~~~d~~-g~~~~~~~~~~~~--------~~~~i~~~~~g-~l~v~---~---~~~~~i~ 128 (300)
T 2qc5_A 67 LIVSSLGDIWFTENG--ANKIGKLSKK-GGFTEYPLPQPDS--------GPYGITEGLNG-DIWFT---Q---LNGDRIG 128 (300)
T ss_dssp EEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSSTTC--------CEEEEEECSTT-CEEEE---E---TTTTEEE
T ss_pred EEECCCCCEEEEecC--CCeEEEECCC-CCeEEecCCCCCC--------CCccceECCCC-CEEEE---c---cCCCeEE
Confidence 333456776665542 3478899998 6655443221111 13366667643 22221 1 1123667
Q ss_pred EEECCCCCeeeecCC-CCeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE
Q 045675 183 VYSTSTGKWKEVAAG-TGSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL 259 (382)
Q Consensus 183 vyss~t~~W~~~~~~-~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~ 259 (382)
.|+.. +........ ....+ .++. -+|.+|+..... ..|..||. +.++..+..|.... ....+.
T Consensus 129 ~~~~~-g~~~~~~~~~~~~~~-----~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~ 194 (300)
T 2qc5_A 129 KLTAD-GTIYEYDLPNKGSYP-----AFITLGSDNALWFTENQN------NSIGRITN-TGKLEEYPLPTNAA-APVGIT 194 (300)
T ss_dssp EECTT-SCEEEEECSSTTCCE-----EEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC-CEEEEE
T ss_pred EECCC-CCEEEccCCCCCCCc-----eeEEECCCCCEEEEecCC------CeEEEECC-CCcEEEeeCCCCCC-CcceEE
Confidence 77766 544433211 11111 2222 357866654322 47999999 66676666654332 233444
Q ss_pred Ee-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccc--eEEeeCCcEEEEEc--CeEEEEeCCCC
Q 045675 260 SY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWP--VGSFRDSKIIMKSV--DQFFLFNPKTK 333 (382)
Q Consensus 260 ~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~--~~~~~~g~l~l~~~--~~~~~yd~~t~ 333 (382)
.. +|.|++.... ...+.++ +.. + +.. ..++. ....| +.+..+|.|++... +.+..||+ ++
T Consensus 195 ~d~~g~l~v~~~~--------~~~i~~~--~~~-g~~~~-~~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 260 (300)
T 2qc5_A 195 SGNDGALWFVEIM--------GNKIGRI--TTT-GEISE-YDIPT-PNARPHAITAGKNSEIWFTEWGANQIGRITN-DN 260 (300)
T ss_dssp ECTTSSEEEEETT--------TTEEEEE--CTT-CCEEE-EECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TS
T ss_pred ECCCCCEEEEccC--------CCEEEEE--cCC-CcEEE-EECCC-CCCCceEEEECCCCCEEEeccCCCeEEEECC-CC
Confidence 43 7888877654 3444444 433 3 332 22321 22334 44445677888874 38999999 56
Q ss_pred cEEEEeee
Q 045675 334 RNFILPID 341 (382)
Q Consensus 334 ~~~~v~~~ 341 (382)
++....+.
T Consensus 261 ~~~~~~~~ 268 (300)
T 2qc5_A 261 TIQEYQLQ 268 (300)
T ss_dssp CEEEEECC
T ss_pred cEEEEECC
Confidence 66655443
No 43
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.41 E-value=2.3 Score=37.00 Aligned_cols=200 Identities=10% Similarity=-0.012 Sum_probs=103.6
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
.+|.|+..+.. ...++.+||.+++...+.... ...++.+++..+ + +++. ...+.+|+.
T Consensus 23 ~~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~~~-----------~~~~i~~~~dG~-l-~v~~-------~~~l~~~d~ 80 (297)
T 3g4e_A 23 VSNSLLFVDIP--AKKVCRWDSFTKQVQRVTMDA-----------PVSSVALRQSGG-Y-VATI-------GTKFCALNW 80 (297)
T ss_dssp TTTEEEEEETT--TTEEEEEETTTCCEEEEECSS-----------CEEEEEEBTTSS-E-EEEE-------TTEEEEEET
T ss_pred CCCEEEEEECC--CCEEEEEECCCCcEEEEeCCC-----------ceEEEEECCCCC-E-EEEE-------CCeEEEEEC
Confidence 35556555543 458899999998765543321 123567777654 2 3322 137889999
Q ss_pred CCCCeeeecCCC-C-eeEEeCCcceEEECceEEEEeeccccc-----ccccEEEEEECCCceeeEeCCCCCCCCCeeeEE
Q 045675 187 STGKWKEVAAGT-G-SCVIYGGQDAVAVKGVLHWIANGIGVL-----VNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL 259 (382)
Q Consensus 187 ~t~~W~~~~~~~-~-~~~~~~~~~~v~~~G~lywl~~~~~~~-----~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~ 259 (382)
.++.++...... . .... ...-.+.-+|.+|+-....... .....|..+|.... ...+.- .. ...-.++
T Consensus 81 ~~g~~~~~~~~~~~~~~~~-~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~--~~-~~pngi~ 155 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNR-FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFD--QV-DISNGLD 155 (297)
T ss_dssp TTTEEEEEEECCTTCSSEE-EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEE--EE-SBEEEEE
T ss_pred CCCcEEEEEecCCCCCCCC-CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEee--cc-ccccceE
Confidence 988887654431 1 1111 0011222368866544321100 12347888888643 222210 00 0112233
Q ss_pred Ee-CCe-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe-ecCC---cccceEEeeCCcEEEEEcC--eEEEEeC
Q 045675 260 SY-DQS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT-AFER---IAWPVGSFRDSKIIMKSVD--QFFLFNP 330 (382)
Q Consensus 260 ~~-~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i-~~~~---~~~~~~~~~~g~l~l~~~~--~~~~yd~ 330 (382)
.. +|+ |+++... ...+.+|.++...+ ......+ .+.. ...-+.+..+|.|++.... ++..||+
T Consensus 156 ~spdg~~lyv~~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 156 WSLDHKIFYYIDSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp ECTTSCEEEEEEGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred EcCCCCEEEEecCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 32 564 6666554 56677777752224 3222111 2221 1233445567788888754 7999999
Q ss_pred CCCcE-EEEeee
Q 045675 331 KTKRN-FILPID 341 (382)
Q Consensus 331 ~t~~~-~~v~~~ 341 (382)
++++. ..+..+
T Consensus 228 ~tG~~~~~i~~p 239 (297)
T 3g4e_A 228 VTGKRLQTVKLP 239 (297)
T ss_dssp TTCCEEEEEECS
T ss_pred CCceEEEEEECC
Confidence 97664 455554
No 44
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.20 E-value=4.2 Score=39.13 Aligned_cols=194 Identities=9% Similarity=-0.041 Sum_probs=105.4
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
-+|.+++.... ...+.|+|+.|++... ++.... ..++.++|..+ |-++.- ....+.+|+
T Consensus 147 p~~~~~vs~~~--d~~V~v~D~~t~~~~~~i~~g~~-----------~~~v~~spdg~-~l~v~~------~d~~V~v~D 206 (543)
T 1nir_A 147 LPNLFSVTLRD--AGQIALVDGDSKKIVKVIDTGYA-----------VHISRMSASGR-YLLVIG------RDARIDMID 206 (543)
T ss_dssp GGGEEEEEEGG--GTEEEEEETTTCCEEEEEECSTT-----------EEEEEECTTSC-EEEEEE------TTSEEEEEE
T ss_pred CCCEEEEEEcC--CCeEEEEECCCceEEEEEecCcc-----------cceEEECCCCC-EEEEEC------CCCeEEEEE
Confidence 36777666553 5689999999987543 332111 23566777543 333321 125899999
Q ss_pred C--CCCCeeeecCC-CCeeEEeCCcceEEE----CceEEEEeecccccccccEEEEEECCCcee-eEeCCCCC-CC----
Q 045675 186 T--STGKWKEVAAG-TGSCVIYGGQDAVAV----KGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPEL-PT---- 252 (382)
Q Consensus 186 s--~t~~W~~~~~~-~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~-~~---- 252 (382)
. .+++- +... ....+. +-++.- +|..-+.+... ...|..+|..+.+. ..++.+.. ..
T Consensus 207 ~~~~t~~~--~~~i~~g~~p~---~va~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~ 276 (543)
T 1nir_A 207 LWAKEPTK--VAEIKIGIEAR---SVESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTY 276 (543)
T ss_dssp TTSSSCEE--EEEEECCSEEE---EEEECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCE
T ss_pred CcCCCCcE--EEEEecCCCcc---eEEeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccCcccc
Confidence 8 55432 1111 111111 122222 67655555432 24788899987654 33444211 00
Q ss_pred --C-CeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcE-EEEEc--CeE
Q 045675 253 --D-CYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKI-IMKSV--DQF 325 (382)
Q Consensus 253 --~-~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l-~l~~~--~~~ 325 (382)
+ ....+... +|...++... ....+.+|-..+. +-.++..++......-+++..+|+. +.... +.+
T Consensus 277 ~~~~~v~~i~~s~~~~~~~vs~~-------~~g~i~vvd~~~~-~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v 348 (543)
T 1nir_A 277 HPEPRVAAIIASHEHPEFIVNVK-------ETGKVLLVNYKDI-DNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKV 348 (543)
T ss_dssp ESCCCEEEEEECSSSSEEEEEET-------TTTEEEEEECTTS-SSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEE
T ss_pred ccCCceEEEEECCCCCEEEEEEC-------CCCeEEEEEecCC-CcceeEEeccCcCccCceECCCCCEEEEEecCCCeE
Confidence 0 12233332 3555555554 3677888877664 2122345554445566777788884 44443 389
Q ss_pred EEEeCCCCcEEEE
Q 045675 326 FLFNPKTKRNFIL 338 (382)
Q Consensus 326 ~~yd~~t~~~~~v 338 (382)
.++|.++++....
T Consensus 349 ~v~D~~tg~l~~~ 361 (543)
T 1nir_A 349 AVIDSKDRRLSAL 361 (543)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCeEEEe
Confidence 9999999986653
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.80 E-value=2.9 Score=35.80 Aligned_cols=192 Identities=12% Similarity=0.062 Sum_probs=100.2
Q ss_pred eeeccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEE
Q 045675 103 IVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAE 182 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 182 (382)
+....+|-+.+.... ...+.++||. ++...++.+.... ...++.+|+... ..+. . .....+.
T Consensus 20 i~~d~~g~l~v~~~~--~~~v~~~d~~-~~~~~~~~~~~~~--------~~~~i~~~~~g~-l~v~---~---~~~~~i~ 81 (299)
T 2z2n_A 20 ITVSDKGKVWITQHK--ANMISCINLD-GKITEYPLPTPDA--------KVMCLTISSDGE-VWFT---E---NAANKIG 81 (299)
T ss_dssp EEECTTSCEEEEETT--TTEEEEECTT-CCEEEEECSSTTC--------CEEEEEECTTSC-EEEE---E---TTTTEEE
T ss_pred eEECCCCCEEEEecC--CCcEEEEcCC-CCeEEecCCcccC--------ceeeEEECCCCC-EEEe---C---CCCCeEE
Confidence 444556777666542 3478999998 7766544321110 233566776432 2221 1 0123566
Q ss_pred EEECCCCCeeeecCC-CCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE
Q 045675 183 VYSTSTGKWKEVAAG-TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL 259 (382)
Q Consensus 183 vyss~t~~W~~~~~~-~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~ 259 (382)
.|+.. +..+..... ..... .++.. +|.+|...... ..|..+|+ +.+...+..|.... ....+.
T Consensus 82 ~~~~~-g~~~~~~~~~~~~~~-----~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~~~~~~~-~~~~i~ 147 (299)
T 2z2n_A 82 RITKK-GIIKEYTLPNPDSAP-----YGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYELPNKGS-YPSFIT 147 (299)
T ss_dssp EECTT-SCEEEEECSSTTCCE-----EEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTC-CEEEEE
T ss_pred EECCC-CcEEEEeCCCcCCCc-----eeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEecCCCCCC-CCceEE
Confidence 67664 444443321 11111 22333 57766654332 48999999 66677665553321 233444
Q ss_pred Ee-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccc--eEEeeCCcEEEEEc--CeEEEEeCCCC
Q 045675 260 SY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWP--VGSFRDSKIIMKSV--DQFFLFNPKTK 333 (382)
Q Consensus 260 ~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~--~~~~~~g~l~l~~~--~~~~~yd~~t~ 333 (382)
.. +|.|++.... ...+ +.++.. + ... ..++. ....| +.+..+|.|++... +.+..||+ ++
T Consensus 148 ~~~~g~l~v~~~~--------~~~i--~~~~~~-g~~~~-~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 148 LGSDNALWFTENQ--------NNAI--GRITES-GDITE-FKIPT-PASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp ECTTSCEEEEETT--------TTEE--EEECTT-CCEEE-EECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred EcCCCCEEEEeCC--------CCEE--EEEcCC-CcEEE-eeCCC-CCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 43 6788876543 3344 444442 4 332 22221 12233 44445677888774 38999999 77
Q ss_pred cEEEEee
Q 045675 334 RNFILPI 340 (382)
Q Consensus 334 ~~~~v~~ 340 (382)
++..+..
T Consensus 214 ~~~~~~~ 220 (299)
T 2z2n_A 214 EITEFKI 220 (299)
T ss_dssp CEEEEEC
T ss_pred cEEEEEC
Confidence 7766533
No 46
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.73 E-value=3 Score=35.75 Aligned_cols=203 Identities=9% Similarity=0.072 Sum_probs=104.7
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
+.+|.+++.+.. ...+.++|+..+....++........ .. ...++.+++..+...|... .....+.+|+
T Consensus 38 ~~~g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~~~~~~--~~--~p~~i~~~~~~g~l~v~~~-----~~~~~i~~~d 106 (286)
T 1q7f_A 38 NAQNDIIVADTN--NHRIQIFDKEGRFKFQFGECGKRDSQ--LL--YPNRVAVVRNSGDIIVTER-----SPTHQIQIYN 106 (286)
T ss_dssp CTTCCEEEEEGG--GTEEEEECTTSCEEEEECCBSSSTTC--BS--SEEEEEEETTTTEEEEEEC-----GGGCEEEEEC
T ss_pred CCCCCEEEEECC--CCEEEEECCCCcEEEEecccCCCccc--cc--CceEEEEEcCCCeEEEEcC-----CCCCEEEEEC
Confidence 446666665432 44788999886555555432211100 00 2335666544343322211 0134788888
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCe
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQS 264 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~ 264 (382)
.....-+.........+. .-++.-+|.+|...... ..|..||...+....+..+.... ....++.. +|.
T Consensus 107 ~~g~~~~~~~~~~~~~~~---~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~-~p~~i~~~~~g~ 176 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPR---GVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLE-FPNGVVVNDKQE 176 (286)
T ss_dssp TTSCEEEEECTTTCSCEE---EEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCS-SEEEEEECSSSE
T ss_pred CCCcEEEEecCccCCCce---EEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccC-CcEEEEECCCCC
Confidence 443322223221111111 01122368876654332 48999998877666664332221 23344443 688
Q ss_pred EEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC-cccc--eEEeeCCcEEEEEc--C-eEEEEeCCCCcEEEE
Q 045675 265 LALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER-IAWP--VGSFRDSKIIMKSV--D-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 265 L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-~~~~--~~~~~~g~l~l~~~--~-~~~~yd~~t~~~~~v 338 (382)
|++.... ...+.+|..+.. . +..+.... +..| +++..+|.|++... + .+..||.+.+....+
T Consensus 177 l~v~~~~--------~~~i~~~~~~g~--~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 177 IFISDNR--------AHCVKVFNYEGQ--Y--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL 244 (286)
T ss_dssp EEEEEGG--------GTEEEEEETTCC--E--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEE
T ss_pred EEEEECC--------CCEEEEEcCCCC--E--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEE
Confidence 8776654 567777765322 2 23343222 2334 44455777888774 3 899999887776666
Q ss_pred eee
Q 045675 339 PID 341 (382)
Q Consensus 339 ~~~ 341 (382)
...
T Consensus 245 ~~~ 247 (286)
T 1q7f_A 245 ESK 247 (286)
T ss_dssp EES
T ss_pred ccc
Confidence 543
No 47
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.69 E-value=4.1 Score=37.22 Aligned_cols=210 Identities=10% Similarity=-0.029 Sum_probs=103.9
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
..+|.|+..+.. ...++.+++.++....+-..... ...++.+|+..+...+.-. ....+++++
T Consensus 125 ~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~lY~~d~------~~~~I~~~~ 187 (386)
T 3v65_B 125 HRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDKLYWTDS------GTSRIEVAN 187 (386)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTSCCEEEEECSSCS---------CCCCEEEETTTTEEEEEET------TTTEEEECB
T ss_pred cCCCeEEEEeCC--CCcEEEEecCCCCcEEEEeCCCC---------CccEEEEEeCCCeEEEEcC------CCCeEEEEe
Confidence 346666666543 44677777776654433221111 1125677765544332211 223666666
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEE---ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE--
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVA---VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-- 260 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-- 260 (382)
..+..-+.+.......+ .++. .+|.|||..... ...|..+|+....-..+... .. ...-.|+.
T Consensus 188 ~dg~~~~~l~~~~l~~P-----~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~-~~-~~PnGlavd~ 255 (386)
T 3v65_B 188 LDGAHRKVLLWQSLEKP-----RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADT-HL-FWPNGLTIDY 255 (386)
T ss_dssp TTSCSCEEEECSSCSCE-----EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEECS-SC-SCEEEEEEEG
T ss_pred CCCCceEEeecCCCCCC-----cEEEEEcCCCeEEEeccCC-----CCEEEEEeCCCCCcEEEEEC-CC-CCeeeEEEeC
Confidence 65443222211100111 2232 268999986543 25899999986544443211 11 12344555
Q ss_pred eCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEe-eCCcEEEEEcC--eEEEEeCCCCc-E
Q 045675 261 YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSF-RDSKIIMKSVD--QFFLFNPKTKR-N 335 (382)
Q Consensus 261 ~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~-~~g~l~l~~~~--~~~~yd~~t~~-~ 335 (382)
.+|+|+++... ... |+..+-. | -.+. .+. ..+..|.++. .++.||+.... +|..+|..+++ .
T Consensus 256 ~~~~lY~aD~~--------~~~--I~~~d~d-G~~~~~-~~~-~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 256 AGRRMYWVDAK--------HHV--IERANLD-GSHRKA-VIS-QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp GGTEEEEEETT--------TTE--EEEECTT-SCSCEE-EEC-SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCCEEEEEECC--------CCE--EEEEeCC-CCeeEE-EEE-CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcce
Confidence 37889988765 444 4454432 2 1111 121 2244565554 34457766654 89999955554 4
Q ss_pred EEEeeeCCCCCeEEEEEEeeceee
Q 045675 336 FILPIDSGMGYSYKVFTYVDSIVA 359 (382)
Q Consensus 336 ~~v~~~~~~~~~~~~~~y~~SLv~ 359 (382)
+.+...... -..+.+|.++..|
T Consensus 323 ~~i~~~~~~--p~gi~v~~~~~q~ 344 (386)
T 3v65_B 323 EIIRNKLHF--PMDIHTLHPQRQP 344 (386)
T ss_dssp EEEECSCSC--CCCEEEESGGGSC
T ss_pred EEEccCCCC--CceEEEEchhcCc
Confidence 444432111 1345556555443
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.64 E-value=3.6 Score=36.44 Aligned_cols=194 Identities=8% Similarity=-0.059 Sum_probs=101.4
Q ss_pred cCceEEEeeCCCCceeEEEEcccccce-eccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEF-KGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
.++.+.+.... ...+.++|+.|++. ..+|.... ..++.+++.. ++..... ....+.+++
T Consensus 52 ~~~~lyv~~~~--~~~v~viD~~t~~~~~~i~~~~~-----------p~~i~~~~~g---~lyv~~~----~~~~v~~iD 111 (328)
T 3dsm_A 52 RDGIGWIVVNN--SHVIFAIDINTFKEVGRITGFTS-----------PRYIHFLSDE---KAYVTQI----WDYRIFIIN 111 (328)
T ss_dssp ETTEEEEEEGG--GTEEEEEETTTCCEEEEEECCSS-----------EEEEEEEETT---EEEEEEB----SCSEEEEEE
T ss_pred ECCEEEEEEcC--CCEEEEEECcccEEEEEcCCCCC-----------CcEEEEeCCC---eEEEEEC----CCCeEEEEE
Confidence 35666555442 45899999999987 44653321 1245555432 3333221 245889999
Q ss_pred CCCCCeee-ecCCC--CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceee-EeCCCCCCCCCeeeEE-E
Q 045675 186 TSTGKWKE-VAAGT--GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELPTDCYVKAL-S 260 (382)
Q Consensus 186 s~t~~W~~-~~~~~--~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~-~ 260 (382)
..+++-.. ++... ..... . ...+..+|.+|...... ...|.++|+.+.+.. .++..... ..+. .
T Consensus 112 ~~t~~~~~~i~~g~~~~~~~~-p-~~i~~~~~~lyv~~~~~-----~~~v~viD~~t~~~~~~i~~g~~p----~~i~~~ 180 (328)
T 3dsm_A 112 PKTYEITGYIECPDMDMESGS-T-EQMVQYGKYVYVNCWSY-----QNRILKIDTETDKVVDELTIGIQP----TSLVMD 180 (328)
T ss_dssp TTTTEEEEEEECTTCCTTTCB-C-CCEEEETTEEEEEECTT-----CCEEEEEETTTTEEEEEEECSSCB----CCCEEC
T ss_pred CCCCeEEEEEEcCCccccCCC-c-ceEEEECCEEEEEcCCC-----CCEEEEEECCCCeEEEEEEcCCCc----cceEEc
Confidence 98875321 22111 00001 1 13334677887765421 248999999987664 34443221 1222 3
Q ss_pred eCCeEEEEEecCCCccCC----CCCeEEEEEECCCCCeeEEEEeecC--CcccceEEeeCCcEEEEEcCeEEEEeCCCCc
Q 045675 261 YDQSLALAVYPGLGFRSR----LSNRFELWVMNEGKGWTRTFNTAFE--RIAWPVGSFRDSKIIMKSVDQFFLFNPKTKR 334 (382)
Q Consensus 261 ~~g~L~~~~~~~~~~~~~----~~~~~~iW~l~~~~~W~~~~~i~~~--~~~~~~~~~~~g~l~l~~~~~~~~yd~~t~~ 334 (382)
-+|+|+++... ..... ....+.++-.+.. .....+.+. ....-+++..++..+++....++.+|+++++
T Consensus 181 ~dG~l~v~~~~--~~~~~~~~~~~~~v~~id~~t~---~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~~t~~ 255 (328)
T 3dsm_A 181 KYNKMWTITDG--GYEGSPYGYEAPSLYRIDAETF---TVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADR 255 (328)
T ss_dssp TTSEEEEEBCC--BCTTCSSCBCCCEEEEEETTTT---EEEEEEECCTTCCCEEEEECTTSCEEEEESSSEEEEETTCSS
T ss_pred CCCCEEEEECC--CccCCccccCCceEEEEECCCC---eEEEEEecCCCCCceeEEEecCCCEEEEEccEEEEEECCCCc
Confidence 47888777654 10000 0134554444333 233344432 2233455555566554444599999999988
Q ss_pred EE
Q 045675 335 NF 336 (382)
Q Consensus 335 ~~ 336 (382)
+.
T Consensus 256 ~~ 257 (328)
T 3dsm_A 256 VP 257 (328)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.63 E-value=3.6 Score=36.44 Aligned_cols=137 Identities=11% Similarity=0.093 Sum_probs=74.2
Q ss_pred CEEEEEECCCCCeeeecCCCC-eeEEeCCcceEEE--C--ceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCC
Q 045675 179 AIAEVYSTSTGKWKEVAAGTG-SCVIYGGQDAVAV--K--GVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPT 252 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~-~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~ 252 (382)
..+.+|+..++.|........ .... ..+.+ + |.+...+..+ ..|..+|+.+..- ..+.+....
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~- 147 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASV----NSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHA- 147 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCE----EEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCT-
T ss_pred CEEEEEEcCCCceeEeeeecCCCcce----EEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCC-
Confidence 478999998888765544321 1111 22222 2 4444444333 4788888876522 211111111
Q ss_pred CCeeeEEEe--------------CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeec-CCcccceEEeeC--
Q 045675 253 DCYVKALSY--------------DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAF-ERIAWPVGSFRD-- 314 (382)
Q Consensus 253 ~~~~~l~~~--------------~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~-~~~~~~~~~~~~-- 314 (382)
.....+... ++.+.++... ...+.+|.+..... |.....+.. .....-+.+..+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEET--------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeC--------CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 012222222 4666666654 66899999986534 776666642 222444555666
Q ss_pred -CcEEEEEc-C-eEEEEeCCCCc
Q 045675 315 -SKIIMKSV-D-QFFLFNPKTKR 334 (382)
Q Consensus 315 -g~l~l~~~-~-~~~~yd~~t~~ 334 (382)
+.+++... + .+.+||++++.
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCeEEEEeCCCEEEEEeCCCCC
Confidence 66554443 4 78899988763
No 50
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.46 E-value=2.4 Score=42.59 Aligned_cols=183 Identities=11% Similarity=0.091 Sum_probs=92.7
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCC-CCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDT-NDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~-~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.|||..++....+....... . ....+.+.+.. +.+-+.+. .+..+.+|+..++.|.......
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~----~---~V~~l~~s~~~~~~~l~s~s------~Dg~I~vwd~~~~~~~~~~~~~ 96 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHE----G---PVWRVDWAHPKFGTILASCS------YDGKVLIWKEENGRWSQIAVHA 96 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCS----S---CEEEEEECCTTSCSEEEEEE------TTSCEEEEEEETTEEEEEEEEC
T ss_pred CCcEEEEecCCCCCccceeccCCc----C---ceEEEEecCCCCCCEEEEEe------CCCeEEEEECCCCccccccccc
Confidence 346778877643333222111111 1 23456666654 33333332 2347899999888776554432
Q ss_pred C-eeEEeCCcceEEE--C--ceEEEEeecccccccccEEEEEECCCceee-EeCCCCCCCCCeeeEEEe-----------
Q 045675 199 G-SCVIYGGQDAVAV--K--GVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELPTDCYVKALSY----------- 261 (382)
Q Consensus 199 ~-~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~~~----------- 261 (382)
. .... .++.+ + |.+...++.+ ..|..+|+.+..-. ...+.... .....+...
T Consensus 97 ~h~~~V----~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~-~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 97 VHSASV----NSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHA-IGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp CCSSCE----EEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCS-SCEEEEEECCCC--------
T ss_pred CCCCCe----EEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCC-CceEEEEecCcccccccccc
Confidence 1 1111 22222 2 4444444433 47888888765211 11111110 011222221
Q ss_pred ---CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeec-CCcccceEEeeC---CcEEEEEc-C-eEEEEeCC
Q 045675 262 ---DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAF-ERIAWPVGSFRD---SKIIMKSV-D-QFFLFNPK 331 (382)
Q Consensus 262 ---~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~-~~~~~~~~~~~~---g~l~l~~~-~-~~~~yd~~ 331 (382)
+|.+.+.+.. ...+.+|.+..... +.....+.. ..-+.-+.+..+ +.+++... + .+.+||++
T Consensus 166 ~~~d~~~l~sgs~--------dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 166 GTKESRKFVTGGA--------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp -CGGGCCEEEEET--------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cCCCCCEEEEEEC--------CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 3566555554 67899999987634 666665532 222444555566 66554443 4 78899988
Q ss_pred CCc
Q 045675 332 TKR 334 (382)
Q Consensus 332 t~~ 334 (382)
+++
T Consensus 238 ~~~ 240 (753)
T 3jro_A 238 NEQ 240 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 863
No 51
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.40 E-value=3.5 Score=35.61 Aligned_cols=110 Identities=12% Similarity=-0.021 Sum_probs=69.0
Q ss_pred ceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCC
Q 045675 214 GVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK 292 (382)
Q Consensus 214 G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~ 292 (382)
|.+|.-++... ...|..+|+.+.+- ..+++|... ....++..+++|++.... ...+.++-.+.
T Consensus 32 g~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~--fgeGi~~~g~~lyv~t~~--------~~~v~viD~~t-- 95 (266)
T 2iwa_A 32 DTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSY--FGEGLTLLNEKLYQVVWL--------KNIGFIYDRRT-- 95 (266)
T ss_dssp TEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEETT--------CSEEEEEETTT--
T ss_pred CeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCc--ceEEEEEeCCEEEEEEec--------CCEEEEEECCC--
Confidence 67777655321 24899999998765 445666543 233456667888888765 45555444433
Q ss_pred CeeEEEEeecCCcccceEEeeCCc-EEEEEcC-eEEEEeCCCCc-EEEEeee
Q 045675 293 GWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD-QFFLFNPKTKR-NFILPID 341 (382)
Q Consensus 293 ~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~-~~~~yd~~t~~-~~~v~~~ 341 (382)
-..+.+|+.. .....++..+|. +|+.... .+..+|++|.+ .+.+.+.
T Consensus 96 -~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 96 -LSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp -TEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred -CcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 3667778765 223455665665 6665544 99999999976 4445543
No 52
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.36 E-value=3.4 Score=35.32 Aligned_cols=191 Identities=11% Similarity=0.066 Sum_probs=101.6
Q ss_pred eeeccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEE
Q 045675 103 IVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAE 182 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 182 (382)
+....+|-|.+.... ...+.++||. ++...++.+.... ...++..|+.. ...|. . .....+.
T Consensus 25 i~~d~~g~l~v~~~~--~~~v~~~~~~-~~~~~~~~~~~~~--------~~~~i~~~~~g-~l~v~---~---~~~~~v~ 86 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHK--ANKISSLDQS-GRIKEFEVPTPDA--------KVMCLIVSSLG-DIWFT---E---NGANKIG 86 (300)
T ss_dssp EEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSSTTC--------CEEEEEECTTS-CEEEE---E---TTTTEEE
T ss_pred eeECCCCCEEEEcCC--CCeEEEECCC-CceEEEECCCCCC--------cceeEEECCCC-CEEEE---e---cCCCeEE
Confidence 444556777666542 4578899998 6666543321110 13356666543 22221 1 1234677
Q ss_pred EEECCCCCeeeecCC-CCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE
Q 045675 183 VYSTSTGKWKEVAAG-TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL 259 (382)
Q Consensus 183 vyss~t~~W~~~~~~-~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~ 259 (382)
+|+.. +.++..... ....+ .++.+ +|.+|+..... ..|..+|.. .+...+.+|.... ....+.
T Consensus 87 ~~d~~-g~~~~~~~~~~~~~~-----~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~~~~-~~~~i~ 152 (300)
T 2qc5_A 87 KLSKK-GGFTEYPLPQPDSGP-----YGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYDLPNKGS-YPAFIT 152 (300)
T ss_dssp EECTT-SCEEEEECSSTTCCE-----EEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEECSSTTC-CEEEEE
T ss_pred EECCC-CCeEEecCCCCCCCC-----ccceECCCCCEEEEccCC------CeEEEECCC-CCEEEccCCCCCC-CceeEE
Confidence 78777 666544322 11111 22322 57776654322 489999998 6666665554221 233444
Q ss_pred E-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccc--eEEeeCCcEEEEEcC--eEEEEeCCCC
Q 045675 260 S-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWP--VGSFRDSKIIMKSVD--QFFLFNPKTK 333 (382)
Q Consensus 260 ~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~--~~~~~~g~l~l~~~~--~~~~yd~~t~ 333 (382)
. -+|+|++.... ... |+.++.. + ... ..++ .....| +.+..+|.|++.... .+..||+ ++
T Consensus 153 ~d~~g~l~v~~~~--------~~~--i~~~~~~-g~~~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 153 LGSDNALWFTENQ--------NNS--IGRITNT-GKLEE-YPLP-TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp ECTTSSEEEEETT--------TTE--EEEECTT-CCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred ECCCCCEEEEecC--------CCe--EEEECCC-CcEEE-eeCC-CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 4 46888776653 333 4555543 4 432 2222 122334 334446778888754 7999999 56
Q ss_pred cEEEEe
Q 045675 334 RNFILP 339 (382)
Q Consensus 334 ~~~~v~ 339 (382)
++....
T Consensus 219 ~~~~~~ 224 (300)
T 2qc5_A 219 EISEYD 224 (300)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 665553
No 53
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.28 E-value=4 Score=35.83 Aligned_cols=208 Identities=12% Similarity=-0.022 Sum_probs=105.5
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
+.+|-|++.... ...++++||.+++...+...... ...++.+++... .. +.... .......+.+|+
T Consensus 53 ~~~g~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~---------~~~~i~~~~dg~-l~-v~~~~-~~~~~~~i~~~d 118 (333)
T 2dg1_A 53 DRQGQLFLLDVF--EGNIFKINPETKEIKRPFVSHKA---------NPAAIKIHKDGR-LF-VCYLG-DFKSTGGIFAAT 118 (333)
T ss_dssp CTTSCEEEEETT--TCEEEEECTTTCCEEEEEECSSS---------SEEEEEECTTSC-EE-EEECT-TSSSCCEEEEEC
T ss_pred CCCCCEEEEECC--CCEEEEEeCCCCcEEEEeeCCCC---------CcceEEECCCCc-EE-EEeCC-CCCCCceEEEEe
Confidence 346666654432 45799999999887665321111 133667776542 22 22111 101124678888
Q ss_pred CCCCCeeee-cCC-CCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eC
Q 045675 186 TSTGKWKEV-AAG-TGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YD 262 (382)
Q Consensus 186 s~t~~W~~~-~~~-~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~ 262 (382)
..++.-+.. ... ...... .-.+.-+|.+|.....+........|..+|..+.++..+.-... ....+.. -+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~---~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~i~~~~d 192 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCID---DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---VANGIALSTD 192 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEE---EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---SEEEEEECTT
T ss_pred CCCCEEEEEEccCccCCccc---ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC---cccceEECCC
Confidence 877765422 211 111111 01122257776654321100113479999998776665421100 1223333 35
Q ss_pred Ce-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEE-EEe--ecCC--cccceEEeeCCcEEEEEc--CeEEEEeCCCC
Q 045675 263 QS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRT-FNT--AFER--IAWPVGSFRDSKIIMKSV--DQFFLFNPKTK 333 (382)
Q Consensus 263 g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~-~~i--~~~~--~~~~~~~~~~g~l~l~~~--~~~~~yd~~t~ 333 (382)
|+ |++.... ...+.+|.++...+ .... ..+ .+.. ...-+.+..+|.+++... ..+..||++++
T Consensus 193 g~~l~v~~~~--------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 193 EKVLWVTETT--------ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp SSEEEEEEGG--------GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC
T ss_pred CCEEEEEeCC--------CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 65 6665543 56788888864312 2211 111 2222 223355556778888773 38999999777
Q ss_pred cEEEEeee
Q 045675 334 RNFILPID 341 (382)
Q Consensus 334 ~~~~v~~~ 341 (382)
..+.+...
T Consensus 265 ~~~~~~~~ 272 (333)
T 2dg1_A 265 PIGQILIP 272 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 66666543
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.18 E-value=4.8 Score=36.48 Aligned_cols=195 Identities=12% Similarity=0.014 Sum_probs=99.1
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeec--CC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVA--AG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~--~~ 197 (382)
+..+.|||..+++...-...+......... ....+.+.|....+-+.+- .+..+.+|+..++.....- ..
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~ 174 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTK--RVGIVAWHPTAQNVLLSAG------CDNVILVWDVGTGAAVLTLGPDV 174 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSS--CEEEEEECSSBTTEEEEEE------TTSCEEEEETTTTEEEEEECTTT
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCC--eEEEEEECcCCCCEEEEEc------CCCEEEEEECCCCCccEEEecCC
Confidence 458999998887543211111100000011 2345667776544433332 2347899998887554322 11
Q ss_pred CCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeC-CCCCCCCCeeeEE-EeCCeEEEEEecCC
Q 045675 198 TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTA-MPELPTDCYVKAL-SYDQSLALAVYPGL 273 (382)
Q Consensus 198 ~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~-~P~~~~~~~~~l~-~~~g~L~~~~~~~~ 273 (382)
... .. .++.+ +|.....+..+ ..|..+|+.+.+..... ...... ....+. .-+|++.+++..
T Consensus 175 ~~~-~v----~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~~-- 240 (402)
T 2aq5_A 175 HPD-TI----YSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPHEGT-RPVHAVFVSEGKILTTGFS-- 240 (402)
T ss_dssp CCS-CE----EEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSSCSS-SCCEEEECSTTEEEEEEEC--
T ss_pred CCC-ce----EEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCCCCC-cceEEEEcCCCcEEEEecc--
Confidence 110 11 12222 56555555433 48999999886653322 222110 122233 236776666532
Q ss_pred CccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEE-EEEc-C-eEEEEeCCCCc--EEEEe
Q 045675 274 GFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKII-MKSV-D-QFFLFNPKTKR--NFILP 339 (382)
Q Consensus 274 ~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~-l~~~-~-~~~~yd~~t~~--~~~v~ 339 (382)
. .....+.+|.+.....=.....++...-...+.+..++..+ +... + .+.+||+++++ ...+.
T Consensus 241 ~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 241 R---MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp T---TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred C---CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 1 03678999998765221223333322223445556677754 4553 3 89999999887 55553
No 55
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.14 E-value=4.7 Score=36.25 Aligned_cols=212 Identities=9% Similarity=-0.045 Sum_probs=109.2
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
..+|.|...+.. ...+..+++.++....+...... ...++.+|+..+...+.- .....+++++
T Consensus 82 ~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~ly~~d------~~~~~I~~~~ 144 (349)
T 3v64_C 82 HRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDKLYWTD------SGTSRIEVAN 144 (349)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTTEEEEEE------TTTTEEEEEE
T ss_pred ccccEEEEEecc--CCceEEEecCCCCceEEEeCCCC---------CccEEEEecCCCeEEEEc------CCCCeEEEEc
Confidence 457777776654 45778888877664443222211 123677787655433221 1234778888
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEE-ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--C
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVA-VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--D 262 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~ 262 (382)
..+..-+.+.......+. .-++. .+|.+||..... ...|.++|+....-..+- .... ...-.|+.. +
T Consensus 145 ~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~-~~~~-~~PnGla~d~~~ 214 (349)
T 3v64_C 145 LDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIA-DTHL-FWPNGLTIDYAG 214 (349)
T ss_dssp TTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESC-CSSC-SCEEEEEEETTT
T ss_pred CCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEE-ECCC-CCcceEEEeCCC
Confidence 765543322211101111 11222 268999987543 258999999865444332 1111 123445553 7
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEe-eCCcEEEEEcC--eEEEEeCCCCc-EEEE
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSF-RDSKIIMKSVD--QFFLFNPKTKR-NFIL 338 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~-~~g~l~l~~~~--~~~~yd~~t~~-~~~v 338 (382)
|+|+++... ...+....++.. . .+. .+. ..+..|.++. .++.||+.... ++..+|..+++ .+.+
T Consensus 215 ~~lY~aD~~--------~~~I~~~~~dG~-~-~~~-~~~-~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 215 RRMYWVDAK--------HHVIERANLDGS-H-RKA-VIS-QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TEEEEEETT--------TTEEEEEETTSC-S-CEE-EEC-SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CEEEEEECC--------CCEEEEEeCCCC-c-eEE-EEe-CCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 889988765 455555555433 1 111 122 1244555543 34557777654 89999965554 4444
Q ss_pred eeeCCCCCeEEEEEEeecee
Q 045675 339 PIDSGMGYSYKVFTYVDSIV 358 (382)
Q Consensus 339 ~~~~~~~~~~~~~~y~~SLv 358 (382)
...... -..+.+|.++.-
T Consensus 283 ~~~~~~--p~gi~v~~~~~q 300 (349)
T 3v64_C 283 RNKLHF--PMDIHTLHPQRQ 300 (349)
T ss_dssp ECSCSC--CCCEEEECGGGS
T ss_pred ccCCCC--CceEEEEccccC
Confidence 322111 133445555543
No 56
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.12 E-value=3.9 Score=35.32 Aligned_cols=177 Identities=12% Similarity=0.112 Sum_probs=90.1
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC--CeeeecC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG--KWKEVAA 196 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~--~W~~~~~ 196 (382)
...++++|+.|++.+. ++...... .....+.|.. .+.+ . ....+..|+. ++ .|+....
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~---------~~~~~~~pdG-~ilv---s-----~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWE---------CNSVAATKAG-EILF---S-----YSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCC---------CCEEEECTTS-CEEE---E-----CBSEEEEECT-TSCEEEEEECC
T ss_pred CCEEEEEECCCCeEEEEeCCCccCC---------CcCeEECCCC-CEEE---e-----CCCCEEEECC-CCCEEEEEcCC
Confidence 5688999998988543 33322100 1123344433 2222 2 1236888888 44 5765442
Q ss_pred CCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCC---Ceee-EEEeCCeEEEEEecC
Q 045675 197 GTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTD---CYVK-ALSYDQSLALAVYPG 272 (382)
Q Consensus 197 ~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~---~~~~-l~~~~g~L~~~~~~~ 272 (382)
... ... ...+..+|.++...... ...|++||...+....+.+...... .... ....+|.+.++...
T Consensus 75 ~~~-~~~---~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~- 144 (276)
T 3no2_A 75 AGC-EMQ---TARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA- 144 (276)
T ss_dssp TTC-EEE---EEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-
T ss_pred CCc-ccc---ccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-
Confidence 111 111 13445577777665441 2478899986664444443322110 1111 12346776655443
Q ss_pred CCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCcEEEEEcC--eEEEEeCCCCcEEE
Q 045675 273 LGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSKIIMKSVD--QFFLFNPKTKRNFI 337 (382)
Q Consensus 273 ~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~--~~~~yd~~t~~~~~ 337 (382)
...+.+|..+ .+. |.... + ..........+|.+++...+ +++.+|++|++..+
T Consensus 145 -------~~~v~~~d~~-G~~~w~~~~--~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 145 -------TSEVREIAPN-GQLLNSVKL--S--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp -------TTEEEEECTT-SCEEEEEEC--S--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred -------CCEEEEECCC-CCEEEEEEC--C--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 4556655554 312 76432 2 11111233456777766554 89999999776543
No 57
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.95 E-value=5.4 Score=36.42 Aligned_cols=189 Identities=11% Similarity=0.012 Sum_probs=96.8
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS 187 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~ 187 (382)
.++|++.... .+...++.+++...+-.... ...++.+|+..+...++-+ ....+..++..
T Consensus 87 ~~~l~~~~~~----~I~~i~~~~~~~~~~~~~~~----------~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~ 146 (386)
T 3v65_B 87 EPVLLFANRI----DIRQVLPHRSEYTLLLNNLE----------NAIALDFHHRRELVFWSDV------TLDRILRANLN 146 (386)
T ss_dssp CCEEEEECBS----CEEEECTTSCCCEEEECSCS----------CEEEEEEETTTTEEEEEET------TTTEEEEEETT
T ss_pred cceeEeecCc----cceeeccCCCcEEEEecCCC----------ccEEEEEecCCCeEEEEeC------CCCcEEEEecC
Confidence 4555544432 56666776655444322111 2457888876654433321 23467778877
Q ss_pred CCCeeeecCCCCeeEEeCCcceEE-ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--CCe
Q 045675 188 TGKWKEVAAGTGSCVIYGGQDAVA-VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--DQS 264 (382)
Q Consensus 188 t~~W~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g~ 264 (382)
+...+.+.......+. .-++- .+|.+||..... ..|.++|+....-..+.. ... .....+++. +|.
T Consensus 147 g~~~~~~~~~~~~~p~---glavd~~~g~lY~~d~~~------~~I~~~~~dg~~~~~l~~-~~l-~~P~giavdp~~g~ 215 (386)
T 3v65_B 147 GSNVEEVVSTGLESPG---GLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLLW-QSL-EKPRAIALHPMEGT 215 (386)
T ss_dssp SCCEEEEECSSCSCCC---CEEEETTTTEEEEEETTT------TEEEECBTTSCSCEEEEC-SSC-SCEEEEEEETTTTE
T ss_pred CCCcEEEEeCCCCCcc---EEEEEeCCCeEEEEcCCC------CeEEEEeCCCCceEEeec-CCC-CCCcEEEEEcCCCe
Confidence 6655443221000000 12222 368999987654 489999997654433321 111 123445554 678
Q ss_pred EEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEE--e-eCCcEEEEEcC--eEEEEeCCCCcEEEE
Q 045675 265 LALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGS--F-RDSKIIMKSVD--QFFLFNPKTKRNFIL 338 (382)
Q Consensus 265 L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~--~-~~g~l~l~~~~--~~~~yd~~t~~~~~v 338 (382)
|++.... ....+....++.. -.++ .+. ..+..|.++ . .++.||+.... .+..+|+.....+.+
T Consensus 216 ly~td~~-------~~~~I~r~~~dG~--~~~~-~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 216 IYWTDWG-------NTPRIEASSMDGS--GRRI-IAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp EEEEECS-------SSCEEEEEETTSC--SCEE-EEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred EEEeccC-------CCCEEEEEeCCCC--CcEE-EEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 8877654 1244443333332 1111 111 233445444 3 34557777654 899999876554444
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.87 E-value=4.4 Score=35.18 Aligned_cols=193 Identities=10% Similarity=0.016 Sum_probs=99.6
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceec-cCCCCC-ccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSL-TESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEV 183 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~-~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~v 183 (382)
+-+|-+++... ...+.|||..+++... +..... .+ .. ....+.+.+.. .+-+++. .+..+.+
T Consensus 60 ~~~~~~l~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~----~~--~v~~~~~~~~~-~~l~~~~------~d~~i~~ 123 (337)
T 1gxr_A 60 SNPTRHVYTGG---KGCVKVWDISHPGNKSPVSQLDCLNR----DN--YIRSCKLLPDG-CTLIVGG------EASTLSI 123 (337)
T ss_dssp CSSSSEEEEEC---BSEEEEEETTSTTCCSCSEEEECSCT----TS--BEEEEEECTTS-SEEEEEE------SSSEEEE
T ss_pred ecCCcEEEEcC---CCeEEEEECCCCCceeeeecccccCC----CC--cEEEEEEcCCC-CEEEEEc------CCCcEEE
Confidence 33555444433 3588999987765321 111000 01 11 23456667643 3333322 2348999
Q ss_pred EECCCCCeeeecCCC-CeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEE
Q 045675 184 YSTSTGKWKEVAAGT-GSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKAL 259 (382)
Q Consensus 184 yss~t~~W~~~~~~~-~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~ 259 (382)
|+..++......... ..... ..+. -+|.....+..+ ..|..+|+.+.+.... ..... ....+.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~~---~i~~~~ 190 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPAC----YALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTD---GASCID 190 (337)
T ss_dssp EECCCC--EEEEEEECSSSCE----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS---CEEEEE
T ss_pred EECCCCCcceeeecccCCCce----EEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeeeecccC---ceEEEE
Confidence 999887654332220 10001 1111 245555554433 3688899987654332 32211 223333
Q ss_pred Ee-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEE
Q 045675 260 SY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNF 336 (382)
Q Consensus 260 ~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~ 336 (382)
.. +|.+.++... ...+.+|.++.. .....+....-...+.+..++..++.. .+ .+..||+++++..
T Consensus 191 ~~~~~~~l~~~~~--------dg~i~~~d~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 191 ISNDGTKLWTGGL--------DNTVRSWDLREG---RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp ECTTSSEEEEEET--------TSEEEEEETTTT---EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred ECCCCCEEEEEec--------CCcEEEEECCCC---ceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence 32 5666555554 678999988765 333344433334445556677755444 34 8999999988765
Q ss_pred EE
Q 045675 337 IL 338 (382)
Q Consensus 337 ~v 338 (382)
.+
T Consensus 260 ~~ 261 (337)
T 1gxr_A 260 QL 261 (337)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.75 E-value=3.5 Score=36.43 Aligned_cols=114 Identities=8% Similarity=-0.006 Sum_probs=66.2
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeEeCC-CCCCCCCeeeEE-EeCCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAM-PELPTDCYVKAL-SYDQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~-P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
+|.+|.....+ ....|..||+.+++.+.+.. +... .....++ .-+|+..++... ....+.+|.++.
T Consensus 50 dg~l~~~~~~~----~~~~v~~~~~~~g~~~~~~~~~~~~-~~p~~~a~spdg~~l~~~~~-------~~~~v~v~~~~~ 117 (347)
T 3hfq_A 50 KDCLYSVDKED----DEGGIAAWQIDGQTAHKLNTVVAPG-TPPAYVAVDEARQLVYSANY-------HKGTAEVMKIAA 117 (347)
T ss_dssp TCEEEEEEEET----TEEEEEEEEEETTEEEEEEEEEEES-CCCSEEEEETTTTEEEEEET-------TTTEEEEEEECT
T ss_pred CCeEEEEEecC----CCceEEEEEecCCcEEEeeeeecCC-CCCEEEEECCCCCEEEEEeC-------CCCEEEEEEeCC
Confidence 78888776532 12489999998877766532 1111 1223344 346764444443 267899999976
Q ss_pred CCCeeEEEEeecCCc----------ccceEEeeCCcEEEEEcC--eEEEEeCC-CCcEEEE
Q 045675 291 GKGWTRTFNTAFERI----------AWPVGSFRDSKIIMKSVD--QFFLFNPK-TKRNFIL 338 (382)
Q Consensus 291 ~~~W~~~~~i~~~~~----------~~~~~~~~~g~l~l~~~~--~~~~yd~~-t~~~~~v 338 (382)
......+..+..... ..-+.+..+|++++.... .+..||++ ++++..+
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 412454444533211 222566677886555543 89999988 5666544
No 60
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.71 E-value=4.1 Score=36.64 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=62.3
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCCce--eeEeCCCCC-------CCCCeeeEEEeCCeEEEEEecCCCccCC
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL--FWRTAMPEL-------PTDCYVKALSYDQSLALAVYPGLGFRSR 278 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~--~~~i~~P~~-------~~~~~~~l~~~~g~L~~~~~~~~~~~~~ 278 (382)
.++..+|.+|.....+ .|.+||..+.+ |+. .++.. ........+..+|.|++....
T Consensus 48 ~p~v~~~~v~~~~~~g-------~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~------- 112 (376)
T 3q7m_A 48 HPALADNVVYAADRAG-------LVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK------- 112 (376)
T ss_dssp CCEEETTEEEEECTTS-------EEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------
T ss_pred ccEEECCEEEEEcCCC-------eEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC-------
Confidence 6778899999876544 89999997654 443 33321 101223455678888875543
Q ss_pred CCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCcEEEEEcC-eEEEEeCCCCcEEE
Q 045675 279 LSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 279 ~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
..+..+-.+..+. |... ++-.....|+. .++.|++...+ .++.||.++++..+
T Consensus 113 --g~l~a~d~~tG~~~W~~~--~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 113 --AQVYALNTSDGTVAWQTK--VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp --SEEEEEETTTCCEEEEEE--CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred --CEEEEEECCCCCEEEEEe--CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 2333333333312 8643 22111233332 35667776665 89999999987544
No 61
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.48 E-value=6.4 Score=36.14 Aligned_cols=177 Identities=15% Similarity=0.060 Sum_probs=91.3
Q ss_pred EEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccc
Q 045675 153 SLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNE 229 (382)
Q Consensus 153 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~ 229 (382)
..|+.+|...+...+.- .....+++++..+..-+.+....... ..++.+ +|.|||..... .
T Consensus 161 p~glavD~~~~~lY~~d------~~~~~I~~~~~~g~~~~~l~~~~~~~-----P~~iavdp~~g~ly~td~~~-----~ 224 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTD------SVLGTVSVADTKGVKRKTLFRENGSK-----PRAIVVDPVHGFMYWTDWGT-----P 224 (400)
T ss_dssp EEEEEEETTTTEEEEEE------TTTTEEEEECTTTCSEEEEEECSSCC-----EEEEEEETTTTEEEEEECSS-----S
T ss_pred cccEEEEecCCceEEEE------CCCCeEEEEeCCCCceEEEEeCCCCC-----cceEEEecccCeEEEEeCCC-----C
Confidence 34788887655433221 12346777777665544332211001 123333 68999987543 2
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCccc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALSY--DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAW 307 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~ 307 (382)
..|..+|+....-..+.. ... ...-.|+.. +++||++... ...|....++.. . .++..-....+..
T Consensus 225 ~~I~~~~~dG~~~~~~~~-~~l-~~P~glavd~~~~~lY~aD~~--------~~~I~~~d~dG~-~-~~~~~~~~~~l~~ 292 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVT-ENI-QWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGG-N-RKTILEDEKRLAH 292 (400)
T ss_dssp CCEEEEETTSCSCEEEEC-SSC-SCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSC-C-CEEEEECSSTTSS
T ss_pred CEEEEEeCCCCccEEEEE-CCC-CceEEEEEEeCCCEEEEEECC--------CCEEEEEeCCCC-c-cEEEEeCCCCCCC
Confidence 479999997654433311 111 133445554 7889988765 444444444332 1 1111111123456
Q ss_pred ceEEeeCC-cEEEEEcC--eEEEEeCCCCc-EEEEeeeCCCCCeEEEEEEeeceee
Q 045675 308 PVGSFRDS-KIIMKSVD--QFFLFNPKTKR-NFILPIDSGMGYSYKVFTYVDSIVA 359 (382)
Q Consensus 308 ~~~~~~~g-~l~l~~~~--~~~~yd~~t~~-~~~v~~~~~~~~~~~~~~y~~SLv~ 359 (382)
|.++.-.+ .||..... .|..+|..+++ .+.+... ...-..+.+|.+..-|
T Consensus 293 P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~--~~~p~~i~v~~~~~qp 346 (400)
T 3p5b_L 293 PFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAEN--LLSPEDMVLFHNLTQP 346 (400)
T ss_dssp EEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECS--CSCEEEEEEESGGGSC
T ss_pred CEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecC--CCCCceEEEEeeccCC
Confidence 76665434 46666544 89999976664 4444322 1113556667766544
No 62
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.44 E-value=4.4 Score=34.16 Aligned_cols=185 Identities=11% Similarity=0.053 Sum_probs=97.0
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
+.+|.|.+... ...++++||.++....++..... ...++.+|+... +.. ... ....+.+|+
T Consensus 75 ~~~g~l~v~~~---~~~i~~~d~~~~~~~~~~~~~~~---------~p~~i~~~~~g~---l~v-~~~---~~~~i~~~~ 135 (270)
T 1rwi_B 75 DGAGTVYVTDF---NNRVVTLAAGSNNQTVLPFDGLN---------YPEGLAVDTQGA---VYV-ADR---GNNRVVKLA 135 (270)
T ss_dssp CTTCCEEEEET---TTEEEEECTTCSCCEECCCCSCS---------SEEEEEECTTCC---EEE-EEG---GGTEEEEEC
T ss_pred CCCCCEEEEcC---CCEEEEEeCCCceEeeeecCCcC---------CCcceEECCCCC---EEE-EEC---CCCEEEEEE
Confidence 44676666554 34789999988776655433211 133677777442 221 111 223677776
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-C
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-D 262 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~ 262 (382)
.++......... . .. . ..++.+ +|.+|+..... ..|..||..+........... .....++.. +
T Consensus 136 ~~~~~~~~~~~~-~-~~--~-p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~ 202 (270)
T 1rwi_B 136 AGSKTQTVLPFT-G-LN--D-PDGVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEA 202 (270)
T ss_dssp TTCCSCEECCCC-S-CC--S-CCCEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSSC--CSEEEEEECTT
T ss_pred CCCceeEeeccc-c-CC--C-ceeEEEeCCCCEEEEECCC------CEEEEEecCCCceEeecccCC--CCceEEEECCC
Confidence 555443322111 0 00 0 123333 58877665432 489999998876544322211 133445543 6
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccc--eEEeeCCcEEEEEcC--eEEEEeCCCCc
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWP--VGSFRDSKIIMKSVD--QFFLFNPKTKR 334 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~--~~~~~~g~l~l~~~~--~~~~yd~~t~~ 334 (382)
|.|++.... ...+.+|..+.. -.. .+....+..| +.+..+|.|++.... ++..|++...+
T Consensus 203 g~l~v~~~~--------~~~v~~~~~~~~--~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 203 GTVYVTEHN--------TNQVVKLLAGST--TST--VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCEEEEETT--------TSCEEEECTTCS--CCE--ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCEEEEECC--------CCcEEEEcCCCC--cce--eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 778777654 445665554332 111 1222223334 444456778777654 88888887654
No 63
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.43 E-value=6.5 Score=36.10 Aligned_cols=187 Identities=12% Similarity=0.045 Sum_probs=99.3
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCe
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGS 200 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~ 200 (382)
..+++||..|++...+...+. ....+.+.|.+. +-++.. . ......+.+++..++..+.+......
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~----------~~~~~~~spdg~-~la~~~-~--~~g~~~i~~~d~~~~~~~~l~~~~~~ 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR----------HNGAPAFSPDGS-KLAFAL-S--KTGSLNLYVMDLASGQIRQVTDGRSN 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS----------CEEEEEECTTSS-EEEEEE-C--TTSSCEEEEEETTTCCEEECCCCSSC
T ss_pred cEEEEEECCCCcEEEeecCCC----------cccCEEEcCCCC-EEEEEE-e--cCCCceEEEEECCCCCEEeCcCCCCc
Confidence 479999999998776654332 133566677543 322222 1 12345788899988876554333211
Q ss_pred eEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCC
Q 045675 201 CVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSR 278 (382)
Q Consensus 201 ~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~ 278 (382)
.. .....-+|. +++....+ ....|..+|+.+.+...+..... ....+.. -+|+..++... ..
T Consensus 269 ~~----~~~~spdg~~l~~~s~~~----g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~~~--~~--- 332 (415)
T 2hqs_A 269 NT----EPTWFPDSQNLAFTSDQA----GRPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMVSS--NG--- 332 (415)
T ss_dssp EE----EEEECTTSSEEEEEECTT----SSCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEEEE--CS---
T ss_pred cc----ceEECCCCCEEEEEECCC----CCcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEEEC--cC---
Confidence 10 011122565 44444333 13478889998877554432211 1222332 36664444443 10
Q ss_pred CCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC----eEEEEeCCCCcEEEEeee
Q 045675 279 LSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD----QFFLFNPKTKRNFILPID 341 (382)
Q Consensus 279 ~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~----~~~~yd~~t~~~~~v~~~ 341 (382)
....+.+|.++.. ... .+........+.+..+|. |++...+ .++.+|++++..+.+..+
T Consensus 333 g~~~i~~~d~~~~-~~~---~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 333 GQQHIAKQDLATG-GVQ---VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp SCEEEEEEETTTC-CEE---ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCS
T ss_pred CceEEEEEECCCC-CEE---EecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCC
Confidence 2346666666554 222 222111234455567777 4444432 699999998888877544
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.34 E-value=5.6 Score=35.15 Aligned_cols=188 Identities=9% Similarity=0.123 Sum_probs=93.6
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCC-CCeEEEEEEeecCCCCCEEEEEECCCCCe-eeecCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDT-NDYVLVRIVNFQARYDAIAEVYSTSTGKW-KEVAAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~-~~ykvv~~~~~~~~~~~~~~vyss~t~~W-~~~~~~ 197 (382)
...+.|||..++++..+-...... . ....+.+.+.. +.+.+++. .+..+.+|+..++.- ......
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~----~---~v~~~~~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHS----A---SVNSVQWAPHEYGPLLLVAS------SDGKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS----S---CEEEEEECCGGGCSEEEEEE------TTSEEEEEECCTTSCCCEEEEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCC----c---ceEEEEeCCCCCCCEEEEec------CCCcEEEEecCCCCceeeEEec
Confidence 458999999888644332222111 0 23356666653 34433332 234788998887632 111100
Q ss_pred CCeeEEeCCcceEEE--------------CceEEEEeecccccccccEEEEEECCCc--eeeEe-CCCCCCCCCeeeEEE
Q 045675 198 TGSCVIYGGQDAVAV--------------KGVLHWIANGIGVLVNEKFVVSYDMNLE--LFWRT-AMPELPTDCYVKALS 260 (382)
Q Consensus 198 ~~~~~~~~~~~~v~~--------------~G~lywl~~~~~~~~~~~~i~~fD~~~~--~~~~i-~~P~~~~~~~~~l~~ 260 (382)
...... ....+. +|.+...+..+ ..|..+|+.+. .+..+ .+.... .....+..
T Consensus 145 ~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~h~-~~v~~~~~ 214 (379)
T 3jrp_A 145 AHAIGV---NSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAW 214 (379)
T ss_dssp CCTTCE---EEEEECCCC----------CTTCEEEEEETT------SCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEE
T ss_pred CCCCce---EEEEEcCccccccccccCCCCCCEEEEEeCC------CeEEEEEecCCCcceeeEEEEeccc-CcEeEEEE
Confidence 000000 011111 35555555443 36777887543 33333 222111 12233333
Q ss_pred e-C---CeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeec---CCcccceEEeeCCcE-EEEEcC-eEEEEeC
Q 045675 261 Y-D---QSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAF---ERIAWPVGSFRDSKI-IMKSVD-QFFLFNP 330 (382)
Q Consensus 261 ~-~---g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~---~~~~~~~~~~~~g~l-~l~~~~-~~~~yd~ 330 (382)
. + |.+.+.... ...+.||.+..... +.. ..+.. .....-+.+..+|.. +....+ .+.+||+
T Consensus 215 sp~~~~~~~l~s~~~--------dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQ--------DRTCIIWTQDNEQGPWKK-TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp CCCCSSSEEEEEEET--------TSCEEEEEESSTTSCCEE-EESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCCCCCCCeEEEEeC--------CCEEEEEeCCCCCcccee-eeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 2 3 566665554 67899999987633 332 22222 122444566667774 444455 8889988
Q ss_pred CC-CcEEEEe
Q 045675 331 KT-KRNFILP 339 (382)
Q Consensus 331 ~t-~~~~~v~ 339 (382)
++ ++|+.+.
T Consensus 286 ~~~~~~~~~~ 295 (379)
T 3jrp_A 286 NLEGKWEPAG 295 (379)
T ss_dssp EETTEEEEEE
T ss_pred CCCCcccccc
Confidence 74 4566653
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.31 E-value=5.2 Score=34.68 Aligned_cols=178 Identities=10% Similarity=0.069 Sum_probs=90.9
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.+||..+++........... . ....+.+.+.. .+-+++. .+..+.+|+..++.....-....
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~-----~--~i~~~~~~~~~-~~l~~~~------~dg~v~~~d~~~~~~~~~~~~~~ 183 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSA-----P--ACYALAISPDS-KVCFSCC------SDGNIAVWDLHNQTLVRQFQGHT 183 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSS-----S--CEEEEEECTTS-SEEEEEE------TTSCEEEEETTTTEEEEEECCCS
T ss_pred CCcEEEEECCCCCcceeeecccCC-----C--ceEEEEECCCC-CEEEEEe------CCCcEEEEeCCCCceeeeeeccc
Confidence 458899998887633221111110 0 13356666632 3333221 23468899988764332211111
Q ss_pred eeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-eCCeEEEEEecCCCc
Q 045675 200 SCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS-YDQSLALAVYPGLGF 275 (382)
Q Consensus 200 ~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~ 275 (382)
. .. ..+.+ +|.....+..+ ..|..+|+.+.+-.. +..+. ....+.. .+|.+.++...
T Consensus 184 ~-~i----~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~---- 244 (337)
T 1gxr_A 184 D-GA----SCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTS----QIFSLGYCPTGEWLAVGME---- 244 (337)
T ss_dssp S-CE----EEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSS----CEEEEEECTTSSEEEEEET----
T ss_pred C-ce----EEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCC----ceEEEEECCCCCEEEEEcC----
Confidence 0 01 12222 56555554433 488999998765433 23222 2223333 35666555554
Q ss_pred cCCCCCeEEEEEECCCCCeeEEEEe-ecCCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEEEE
Q 045675 276 RSRLSNRFELWVMNEGKGWTRTFNT-AFERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~~W~~~~~i-~~~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~~v 338 (382)
...+.+|.+... . . ..+ ........+.+..++.+++.. .+ .+.+||+++++....
T Consensus 245 ----~~~i~~~~~~~~-~--~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 302 (337)
T 1gxr_A 245 ----SSNVEVLHVNKP-D--K-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ 302 (337)
T ss_dssp ----TSCEEEEETTSS-C--E-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ----CCcEEEEECCCC-C--e-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE
Confidence 567899988775 2 1 112 112224445556677755444 34 899999999876543
No 66
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.26 E-value=5.4 Score=34.77 Aligned_cols=199 Identities=10% Similarity=0.006 Sum_probs=100.2
Q ss_pred eccCc-eEEEeeCCCCceeEEEEcccccce-e-ccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEE
Q 045675 105 GSCNG-LLCLDVSSAFGMAFVLWNPATNEF-K-GLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIA 181 (382)
Q Consensus 105 ~s~~G-ll~~~~~~~~~~~~~V~NP~T~~~-~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 181 (382)
-+-+| .|++.... ...++++|+.+++. . .++.... ...++.++|..+ +-+ ... .......+
T Consensus 47 ~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~----------~~~~~~~s~dg~-~l~--~~~-~~~~~~~i 110 (331)
T 3u4y_A 47 ITSDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQEGQS----------SMADVDITPDDQ-FAV--TVT-GLNHPFNM 110 (331)
T ss_dssp ECSSSCEEEEEEST--TCEEEEEECSSSSCEEEEEEECSS----------CCCCEEECTTSS-EEE--ECC-CSSSSCEE
T ss_pred EcCCCCEEEEEeCC--CCeEEEEECCCCceeEEecccCCC----------CccceEECCCCC-EEE--Eec-CCCCcccE
Confidence 34455 45544443 45899999999875 2 2222111 111255666433 322 221 11122389
Q ss_pred EEEECCCCCeeeecCCCCeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCce-e-eE--eCCCCCCCCCee
Q 045675 182 EVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLEL-F-WR--TAMPELPTDCYV 256 (382)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~-~-~~--i~~P~~~~~~~~ 256 (382)
.+|+..++.-...-.... ... ...+.-+|. +|...... ...|..||+.... . .. ..++... ...
T Consensus 111 ~v~d~~~~~~~~~~~~~~-~~~---~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~--~~~ 179 (331)
T 3u4y_A 111 QSYSFLKNKFISTIPIPY-DAV---GIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQEFISGGT--RPF 179 (331)
T ss_dssp EEEETTTTEEEEEEECCT-TEE---EEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEEEEECSSS--SEE
T ss_pred EEEECCCCCeEEEEECCC-Ccc---ceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCCccccCCC--Ccc
Confidence 999988775433211110 011 122233565 55544332 1126666654321 1 10 1112211 223
Q ss_pred eEEE-eCCe-EEEEEecCCCccCCCCCeEEEEEECCCCCe-eEEEEeecCCcccceEEeeCCc-EEEEEcC--eEEEEeC
Q 045675 257 KALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKGW-TRTFNTAFERIAWPVGSFRDSK-IIMKSVD--QFFLFNP 330 (382)
Q Consensus 257 ~l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W-~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~--~~~~yd~ 330 (382)
.+.. -+|+ |++.... ...+.+|.++.. .. ..+..++.......+.+..+|. |++.... .+.+||+
T Consensus 180 ~~~~spdg~~l~v~~~~--------~~~v~v~d~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLI--------GNSIGILETQNP-ENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp EEEECTTSSEEEEEETT--------TTEEEEEECSST-TSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred ceEECCCCCEEEEEeCC--------CCeEEEEECCCC-cccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 3333 3676 5554443 678999998755 22 2245555444445577777888 5555543 7999999
Q ss_pred CCCcEEEEe
Q 045675 331 KTKRNFILP 339 (382)
Q Consensus 331 ~t~~~~~v~ 339 (382)
++++.+.+.
T Consensus 251 ~~~~~~~~~ 259 (331)
T 3u4y_A 251 LSGTLSFVK 259 (331)
T ss_dssp TTTEEEEEE
T ss_pred CCCceeeec
Confidence 999886653
No 67
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.14 E-value=5.5 Score=34.65 Aligned_cols=145 Identities=10% Similarity=-0.024 Sum_probs=78.0
Q ss_pred CEEEEEECCC-CCeeeec--CC---CCeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECC--Cceee---Ee-
Q 045675 179 AIAEVYSTST-GKWKEVA--AG---TGSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMN--LELFW---RT- 245 (382)
Q Consensus 179 ~~~~vyss~t-~~W~~~~--~~---~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~--~~~~~---~i- 245 (382)
..+.+|+..+ +...... .. ...... .-...-+|. +|...... ..|..+|+. +.++. .+
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~pdg~~l~~~~~~~------~~i~~~~~~~~~g~~~~~~~~~ 221 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPR---HMVFHPNEQYAYCVNELN------SSVDVWELKDPHGNIECVQTLD 221 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEE---EEEECTTSSEEEEEETTT------TEEEEEESSCTTSCCEEEEEEE
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcc---eEEECCCCCEEEEEeCCC------CEEEEEEecCCCCcEEEEeecc
Confidence 4788898887 6665332 11 111111 111222565 44443222 478888884 34443 22
Q ss_pred CCCCCCCC--CeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCc-EEEE
Q 045675 246 AMPELPTD--CYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSK-IIMK 320 (382)
Q Consensus 246 ~~P~~~~~--~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~-l~l~ 320 (382)
.+|..... ....+.. -+|+..++... ....+.+|.++...+ +..+..++.......+.+..+|. |++.
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~-------~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 294 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDR-------TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAA 294 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEET-------TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEE
T ss_pred ccCccccccCCccceEECCCCCEEEEEec-------CCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEe
Confidence 34443211 1222333 35654444443 267899999986434 77777776544345567777777 5555
Q ss_pred EcC--eEEEE--eCCCCcEEEEe
Q 045675 321 SVD--QFFLF--NPKTKRNFILP 339 (382)
Q Consensus 321 ~~~--~~~~y--d~~t~~~~~v~ 339 (382)
... .+.+| |.++++++.+.
T Consensus 295 ~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 295 GQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp CTTTCEEEEEEEETTTTEEEEEE
T ss_pred cCCCCeEEEEEEcCCCceeeEcc
Confidence 532 55555 88888888774
No 68
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.00 E-value=5.2 Score=34.01 Aligned_cols=158 Identities=10% Similarity=-0.000 Sum_probs=92.5
Q ss_pred EEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccE
Q 045675 152 VSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKF 231 (382)
Q Consensus 152 ~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~ 231 (382)
..-|+-|++ .. +-... +......+.+++..+++=...-..+... + + ......++.+|-+.... ..
T Consensus 22 ftqGL~~~~---~~--Lyest-G~~g~S~v~~vD~~tgkv~~~~~l~~~~-f-g-eGi~~~~~~ly~ltw~~------~~ 86 (243)
T 3mbr_X 22 FTEGLFYLR---GH--LYEST-GETGRSSVRKVDLETGRILQRAEVPPPY-F-G-AGIVAWRDRLIQLTWRN------HE 86 (243)
T ss_dssp CEEEEEEET---TE--EEEEE-CCTTSCEEEEEETTTCCEEEEEECCTTC-C-E-EEEEEETTEEEEEESSS------SE
T ss_pred ccccEEEEC---CE--EEEEC-CCCCCceEEEEECCCCCEEEEEeCCCCc-c-e-eEEEEeCCEEEEEEeeC------CE
Confidence 355888886 21 11121 1223468999999998644332222211 1 1 24456688999998765 58
Q ss_pred EEEEECCCcee-eEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCc-----
Q 045675 232 VVSYDMNLELF-WRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERI----- 305 (382)
Q Consensus 232 i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~----- 305 (382)
+.+||..+-+- ..++.|.. ...|+..+++|++.... . .|++++-. .-..+.+|....-
T Consensus 87 v~v~D~~tl~~~~ti~~~~~----Gwglt~dg~~L~vSdgs---------~--~l~~iDp~-t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGE----GWALTSDDSHLYMSDGT---------A--VIRKLDPD-TLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp EEEEETTTTEEEEEEECSSC----CCEEEECSSCEEEECSS---------S--EEEEECTT-TCCEEEEEECEETTEECC
T ss_pred EEEEECCcCcEEEEEeCCCC----ceEEeeCCCEEEEECCC---------C--eEEEEeCC-CCeEEEEEEEccCCcccc
Confidence 99999987543 55666542 35566666777775432 2 46777754 2244555543211
Q ss_pred -ccceEEeeCCcEEEEEc--CeEEEEeCCCCcEEE-Eeee
Q 045675 306 -AWPVGSFRDSKIIMKSV--DQFFLFNPKTKRNFI-LPID 341 (382)
Q Consensus 306 -~~~~~~~~~g~l~l~~~--~~~~~yd~~t~~~~~-v~~~ 341 (382)
..-+.. .+|+||.... +.+.+.|+++++... +.+.
T Consensus 151 ~lNeLe~-~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 151 NLNELEW-VNGELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred cceeeEE-eCCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 112222 3788886653 399999999998654 4543
No 69
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.92 E-value=4.9 Score=36.07 Aligned_cols=132 Identities=10% Similarity=0.101 Sum_probs=70.1
Q ss_pred EEEEEECCCC--CeeeecCCC-------CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCce--eeEeCCC
Q 045675 180 IAEVYSTSTG--KWKEVAAGT-------GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL--FWRTAMP 248 (382)
Q Consensus 180 ~~~vyss~t~--~W~~~~~~~-------~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~--~~~i~~P 248 (382)
.+..|+..++ .|+...... ..... ...+..+|.+|.....+ .|.+||..+.+ |+. .++
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~v~~~~g-------~l~a~d~~tG~~~W~~-~~~ 132 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLS---GGVTVSGGHVYIGSEKA-------QVYALNTSDGTVAWQT-KVA 132 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEE---EEEEEETTEEEEEETTS-------EEEEEETTTCCEEEEE-ECS
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccc---cCceEeCCEEEEEcCCC-------EEEEEECCCCCEEEEE-eCC
Confidence 6777777665 576543221 11111 24566788888765444 89999997654 433 333
Q ss_pred CCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC---eeEEEEeec---CCcccceEEeeCCcEEEEEc
Q 045675 249 ELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG---WTRTFNTAF---ERIAWPVGSFRDSKIIMKSV 322 (382)
Q Consensus 249 ~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~---W~~~~~i~~---~~~~~~~~~~~~g~l~l~~~ 322 (382)
... .......+|.|++.... . .|+.++-..| |.....-+. .....|.. .++.|++...
T Consensus 133 ~~~---~~~p~~~~~~v~v~~~~---------g--~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~ 196 (376)
T 3q7m_A 133 GEA---LSRPVVSDGLVLIHTSN---------G--QLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGD 196 (376)
T ss_dssp SCC---CSCCEEETTEEEEECTT---------S--EEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCT
T ss_pred Cce---EcCCEEECCEEEEEcCC---------C--eEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcC
Confidence 322 11223446766654332 2 3444442223 765432111 11122332 2555666665
Q ss_pred C-eEEEEeCCCCcEEEE
Q 045675 323 D-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 323 ~-~~~~yd~~t~~~~~v 338 (382)
+ .++.||+++++...-
T Consensus 197 ~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 197 NGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp TTEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCCcEEEE
Confidence 5 899999998876543
No 70
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.78 E-value=5.3 Score=34.43 Aligned_cols=109 Identities=9% Similarity=-0.011 Sum_probs=67.5
Q ss_pred EEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEE
Q 045675 210 VAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVM 288 (382)
Q Consensus 210 v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l 288 (382)
.+.+|.||.-++.. ..|..+|+.+.+. ..+ +|... ....+...+++|+++... ...+.++-.
T Consensus 61 ~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw~--------~~~v~V~D~ 123 (268)
T 3nok_A 61 VFHQGHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTWT--------EGLLFTWSG 123 (268)
T ss_dssp EEETTEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEESS--------SCEEEEEET
T ss_pred EEECCEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEcc--------CCEEEEEEC
Confidence 34456666655543 3599999998766 445 66543 234467778899988654 444444444
Q ss_pred CCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC-eEEEEeCCCCcEE-EEee
Q 045675 289 NEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD-QFFLFNPKTKRNF-ILPI 340 (382)
Q Consensus 289 ~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~-~~~~yd~~t~~~~-~v~~ 340 (382)
+.. ..+.+|+...- ..++..+|. |++.... ++..+|++|.+.. .+.+
T Consensus 124 ~Tl---~~~~ti~~~~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 124 MPP---QRERTTRYSGE--GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTT---EEEEEEECSSC--CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CcC---cEEEEEeCCCc--eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 443 66777776432 344444555 5555534 9999999997644 4544
No 71
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.69 E-value=5.9 Score=34.06 Aligned_cols=192 Identities=11% Similarity=0.019 Sum_probs=102.9
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCC-C
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAG-T 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~-~ 198 (382)
...++.+||.++ ...+..... ...++.+++... . ++. .. ....+.+|+..++..+..... .
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~~----------~~~~l~~~~dg~-l-~v~-~~----~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPSH----------HQNGHCLNKQGH-L-IAC-SH----GLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSCS----------SEEEEEECTTCC-E-EEE-ET----TTTEEEEECSTTCCEEEEECEET
T ss_pred CCEEEEEECCCC-eEEEECCCC----------CcceeeECCCCc-E-EEE-ec----CCCeEEEEcCCCCcEEEEeeccC
Confidence 457999999988 555443221 133677777543 2 222 11 234788888888877654322 1
Q ss_pred CeeEEeCCcceEEECceEEEEeec-cc----------ccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEE
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANG-IG----------VLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLA 266 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~-~~----------~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~ 266 (382)
.........-.+.-+|.+|+.... +. .......|..+|.. .+...+.-... ....++. -+|++.
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV---KPNGLAFLPSGNLL 186 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS---SEEEEEECTTSCEE
T ss_pred CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC---CCccEEECCCCCEE
Confidence 111100001222236887664221 00 00012489999987 55555422111 1223333 367766
Q ss_pred EEEecCCCccCCCCCeEEEEEECCCCC-e-eEEEEeec-CCcccceEEeeCCcEEEEEcCeEEEEeCCCCcEEEEeeeC
Q 045675 267 LAVYPGLGFRSRLSNRFELWVMNEGKG-W-TRTFNTAF-ERIAWPVGSFRDSKIIMKSVDQFFLFNPKTKRNFILPIDS 342 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~iW~l~~~~~-W-~~~~~i~~-~~~~~~~~~~~~g~l~l~~~~~~~~yd~~t~~~~~v~~~~ 342 (382)
+... ....+.+|.++.. + . .....+.. .....-+++..+|.|++...+.+..||++.+..+.+..+.
T Consensus 187 -v~~~-------~~~~i~~~~~~~~-g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~~~~~~~~~~ 256 (296)
T 3e5z_A 187 -VSDT-------GDNATHRYCLNAR-GETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGDELGRVLTPQ 256 (296)
T ss_dssp -EEET-------TTTEEEEEEECSS-SCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTSCEEEEEECSS
T ss_pred -EEeC-------CCCeEEEEEECCC-CcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCCCEEEEEECCC
Confidence 4443 2678888888743 4 5 33333311 1113346666788898888669999999977777776543
No 72
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.62 E-value=5.5 Score=33.56 Aligned_cols=185 Identities=11% Similarity=0.008 Sum_probs=97.6
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC-CCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST-GKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t-~~W~~~~~~~ 198 (382)
...++++|+.+++...+..... ....+.+.|... +-++. . ...+.+++..+ +.........
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~----------~v~~~~~spdg~-~l~~~-~------~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE----------LFEAPNWSPDGK-YLLLN-S------EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS----------CCEEEEECTTSS-EEEEE-E------TTEEEEEESSSCCSCEECCCTT
T ss_pred ceeEEEEeCCCCceeeeccCCc----------ceEeeEECCCCC-EEEEE-c------CCeEEEEeCCCCCCceEecccc
Confidence 6689999999998776544322 123566666543 33332 1 23799999988 7665544322
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccC
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRS 277 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~ 277 (382)
..... . .....-+|........... ....|..+|..+.....+..... ...+... +|+..++...
T Consensus 83 ~~~~~-~-~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~------ 148 (297)
T 2ojh_A 83 ATICN-N-DHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGI------ 148 (297)
T ss_dssp CCCBC-S-CCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEE------
T ss_pred ccccc-c-ceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEEC------
Confidence 11111 0 1222335654444432110 23588889988777655533221 2223322 6664443333
Q ss_pred CCCCeEEEEEECCCCCeeEEEEe-ecCCcccceEEeeCCc-EEEEEc-C---eEEEEeCCCCcEEEEe
Q 045675 278 RLSNRFELWVMNEGKGWTRTFNT-AFERIAWPVGSFRDSK-IIMKSV-D---QFFLFNPKTKRNFILP 339 (382)
Q Consensus 278 ~~~~~~~iW~l~~~~~W~~~~~i-~~~~~~~~~~~~~~g~-l~l~~~-~---~~~~yd~~t~~~~~v~ 339 (382)
....+.||.++...+ . ...+ ........+.+..+|. |++... + .++.+++.++..+.+.
T Consensus 149 -~~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 149 -RDQVFDIYSMDIDSG-V-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp -ETTEEEEEEEETTTC-C-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred -CCCceEEEEEECCCC-c-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 156789999865422 1 1112 1112233445556776 555543 2 7888888777776653
No 73
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=91.60 E-value=7.3 Score=34.93 Aligned_cols=187 Identities=12% Similarity=0.045 Sum_probs=96.6
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS 187 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~ 187 (382)
.+.|++.... .+...++.+.+...+-.... ...++.+|+..+...++-+ ....+..++..
T Consensus 44 ~~~ll~~~~~----~I~~i~~~g~~~~~~~~~~~----------~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~ 103 (349)
T 3v64_C 44 EPVLLFANRI----DIRQVLPHRSEYTLLLNNLE----------NAIALDFHHRRELVFWSDV------TLDRILRANLN 103 (349)
T ss_dssp CCEEEEECBS----CEEEECTTSCCEEEEECSCS----------CEEEEEEETTTTEEEEEET------TTTEEEEEETT
T ss_pred CceeEeeccc----ceEEEeCCCCeeEEeecCCC----------ceEEEEEeccccEEEEEec------cCCceEEEecC
Confidence 4555554432 46666766655444322111 2457888876654433321 23467777777
Q ss_pred CCCeeeecCCCCeeEEeCCcceEE---ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--C
Q 045675 188 TGKWKEVAAGTGSCVIYGGQDAVA---VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--D 262 (382)
Q Consensus 188 t~~W~~~~~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~ 262 (382)
+..-+.+...... . ..++. .+|.+||..... ..|.++|+....-..+.. ... .....+++. +
T Consensus 104 g~~~~~~~~~~~~----~-p~glavd~~~g~ly~~d~~~------~~I~~~~~dG~~~~~l~~-~~l-~~P~~iavdp~~ 170 (349)
T 3v64_C 104 GSNVEEVVSTGLE----S-PGGLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLLW-QSL-EKPRAIALHPME 170 (349)
T ss_dssp SCSCEEEECSSCS----C-CCEEEEETTTTEEEEEETTT------TEEEEEETTSCSCEEEEC-TTC-SCEEEEEEETTT
T ss_pred CCCceEEEeCCCC----C-ccEEEEecCCCeEEEEcCCC------CeEEEEcCCCCceEEEEe-CCC-CCcceEEEecCc
Confidence 6654443221000 0 12333 368999987654 589999998765443321 111 123445554 6
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEE--e-eCCcEEEEEcC--eEEEEeCCCCcEEE
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGS--F-RDSKIIMKSVD--QFFLFNPKTKRNFI 337 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~--~-~~g~l~l~~~~--~~~~yd~~t~~~~~ 337 (382)
|.|++.... ....+....++.. . .+ .+-...+..|-++ . .++.||+.... ++..+|+.....+.
T Consensus 171 g~ly~td~~-------~~~~I~r~~~dG~-~-~~--~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~ 239 (349)
T 3v64_C 171 GTIYWTDWG-------NTPRIEASSMDGS-G-RR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA 239 (349)
T ss_dssp TEEEEEECS-------SSCEEEEEETTSC-S-CE--ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CeEEEeccC-------CCCEEEEEeCCCC-C-cE--EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE
Confidence 788877654 1244444444432 1 11 1111234445444 3 24557777654 88899987655444
Q ss_pred E
Q 045675 338 L 338 (382)
Q Consensus 338 v 338 (382)
+
T Consensus 240 ~ 240 (349)
T 3v64_C 240 V 240 (349)
T ss_dssp E
T ss_pred E
Confidence 3
No 74
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.39 E-value=2.5 Score=39.09 Aligned_cols=185 Identities=10% Similarity=0.108 Sum_probs=88.3
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.|||..+++...+-.... +.. ...++.|.|..+.+-+.+- .+..+.+++..++.-+.......
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~g-H~~------~V~~l~f~p~~~~~l~s~s------~D~~v~iwd~~~~~~~~~~~~~~ 207 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIG-AGG------SITGLKFNPLNTNQFYASS------MEGTTRLQDFKGNILRVFASSDT 207 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCS-SSC------CCCEEEECSSCTTEEEEEC------SSSCEEEEETTSCEEEEEECCSS
T ss_pred CCEEEEEECCCCCceeEEEccC-CCC------CEEEEEEeCCCCCEEEEEe------CCCEEEEeeccCCceeEEeccCC
Confidence 4589999998876443222111 111 1335677776555433221 33478888887765544333211
Q ss_pred -eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccC
Q 045675 200 -SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRS 277 (382)
Q Consensus 200 -~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~ 277 (382)
.... ..-...-+|.+...++.+ ..|..+|+.++....+.... .....+... +|.-.++...
T Consensus 208 ~~~~~--~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~~~~h~---~~v~~v~~~p~~~~~~~s~s------ 270 (435)
T 4e54_B 208 INIWF--CSLDVSASSRMVVTGDNV------GNVILLNMDGKELWNLRMHK---KKVTHVALNPCCDWFLATAS------ 270 (435)
T ss_dssp CSCCC--CCEEEETTTTEEEEECSS------SBEEEEESSSCBCCCSBCCS---SCEEEEEECTTCSSEEEEEE------
T ss_pred CCccE--EEEEECCCCCEEEEEeCC------CcEeeeccCcceeEEEeccc---ceEEeeeecCCCceEEEEec------
Confidence 1111 011222356555544433 46888898765443322111 122223222 4443333333
Q ss_pred CCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCcEEEE-EcC-eEEEEeCCCCcE
Q 045675 278 RLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSKIIMK-SVD-QFFLFNPKTKRN 335 (382)
Q Consensus 278 ~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~l~l~-~~~-~~~~yd~~t~~~ 335 (382)
....+.||-+..... =.......-...+.-+.+..+|..++. ..+ .+.+||.++...
T Consensus 271 -~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 271 -VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp -TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred -CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 256789998875422 000000000111222334456664443 344 888999987653
No 75
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.33 E-value=7.6 Score=34.61 Aligned_cols=195 Identities=8% Similarity=-0.053 Sum_probs=93.5
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCC-ccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSL-TESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
++.|+.... ...+.|||..+++......... .+. . ....+.|.|.. .+-+.+ . .+..+.+++.
T Consensus 93 d~~l~~~s~---dg~v~lWd~~~~~~~~~~~~~~~~H~----~--~V~~v~~spdg-~~l~sg-s-----~d~~i~iwd~ 156 (344)
T 4gqb_B 93 ERGILVASD---SGAVELWELDENETLIVSKFCKYEHD----D--IVSTVSVLSSG-TQAVSG-S-----KDICIKVWDL 156 (344)
T ss_dssp TTEEEEEET---TSEEEEEEECTTSSCEEEEEEEECCS----S--CEEEEEECTTS-SEEEEE-E-----TTSCEEEEET
T ss_pred CCeEEEEEC---CCEEEEEeccCCCceeEeeccccCCC----C--CEEEEEECCCC-CEEEEE-e-----CCCeEEEEEC
Confidence 555554444 4589999999887544322111 111 1 23356666643 332222 1 3347888888
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEEe--CC
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALSY--DQ 263 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~~--~g 263 (382)
.++.=...-.... ... . .-...-+|.-+.+.+.. ...|..+|+.+.+... +..+... .....+... ++
T Consensus 157 ~~~~~~~~~~~h~-~~V-~-~~~~~~~~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 157 AQQVVLSSYRAHA-AQV-T-CVAASPHKDSVFLSCSE-----DNRILLWDTRCPKPASQIGCSAPG-YLPTSLAWHPQQS 227 (344)
T ss_dssp TTTEEEEEECCCS-SCE-E-EEEECSSCTTEEEEEET-----TSCEEEEETTSSSCEEECC----C-CCEEEEEECSSCT
T ss_pred CCCcEEEEEcCcC-Cce-E-EEEecCCCCCceeeecc-----ccccccccccccceeeeeecceee-ccceeeeecCCCC
Confidence 7763211111000 001 0 01111234322333222 2468889998765433 3322221 012223322 45
Q ss_pred eEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCc-EEE-EEcC-eEEEEeCCCCcEEEE
Q 045675 264 SLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSK-IIM-KSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 264 ~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~-l~l-~~~~-~~~~yd~~t~~~~~v 338 (382)
.+.+.+.. ...+.||-+... ..+..+.. ..-+.-+.+..+|. ++. ...+ .+.+||.++++..++
T Consensus 228 ~~l~sg~~--------dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 228 EVFVFGDE--------NGTVSLVDTKST---SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp TEEEEEET--------TSEEEEEESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred cceEEecc--------CCcEEEEECCCC---cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 55555544 678999988765 22223321 12234455556664 444 3444 899999999876554
No 76
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.31 E-value=7.4 Score=35.03 Aligned_cols=185 Identities=11% Similarity=0.061 Sum_probs=92.1
Q ss_pred ceeEEEEcccccc------eeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeee
Q 045675 120 GMAFVLWNPATNE------FKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKE 193 (382)
Q Consensus 120 ~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~ 193 (382)
...+.+||..+++ ..........+.. ....+.+.+..+.+.+.+- .+..+.+|+..++.-..
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD------EVISLAWNQSLAHVFASAG------SSNFASIWDLKAKKEVI 202 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC------CCCEEEECSSCTTEEEEES------SSSCEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCccccccccccccccccCCCC------CeeEEEeCCCCCcEEEEEc------CCCCEEEEECCCCCcce
Confidence 4589999998876 2221111111111 1235666665444433321 23478999988764332
Q ss_pred ecCCCC-----eeEEeCCcceEEE--Cc-eEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--CC
Q 045675 194 VAAGTG-----SCVIYGGQDAVAV--KG-VLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--DQ 263 (382)
Q Consensus 194 ~~~~~~-----~~~~~~~~~~v~~--~G-~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g 263 (382)
.-.... .... ..+.+ +| .+...+..+. ....|..+|+.+..-....+..........+... +|
T Consensus 203 ~~~~~~~~~~~~~~v----~~~~~~~~~~~~l~~~~~d~---~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 275 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQL----SVVEWHPKNSTRVATATGSD---NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE 275 (416)
T ss_dssp EECCCCCSSCCCCCE----EEEEECSSCTTEEEEEECCS---SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS
T ss_pred EEeccccccccCCce----EEEEECCCCCCEEEEEECCC---CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC
Confidence 211110 1111 22222 23 3444443331 0116888898874211111210111123334332 56
Q ss_pred eEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCC-cEEEEEc-C-eEEEEeCCCCc
Q 045675 264 SLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDS-KIIMKSV-D-QFFLFNPKTKR 334 (382)
Q Consensus 264 ~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g-~l~l~~~-~-~~~~yd~~t~~ 334 (382)
.+.+.... ...+.+|.++.. ..+..+.. .....-+.+..++ .+++... + .+.+||+++.+
T Consensus 276 ~~l~s~~~--------dg~v~~wd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 276 HLLLSSGR--------DNTVLLWNPESA---EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SCEEEEES--------SSEEEEECSSSC---CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CeEEEEeC--------CCCEEEeeCCCC---ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 66666654 678999988765 34444432 2224456666676 5655554 3 89999998775
No 77
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.26 E-value=7.8 Score=34.61 Aligned_cols=188 Identities=9% Similarity=-0.064 Sum_probs=90.2
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
+.+|-.++.... ...+.|||..+++....-..... ....+.+.+..+.+.+.+. .+..+.+|+
T Consensus 148 spdg~~l~sgs~--dg~v~iwd~~~~~~~~~~~~h~~---------~v~~v~~s~~~~~~~~s~~------~dg~v~~wd 210 (357)
T 4g56_B 148 FSDGTQAVSGGK--DFSVKVWDLSQKAVLKSYNAHSS---------EVNCVAACPGKDTIFLSCG------EDGRILLWD 210 (357)
T ss_dssp CSSSSEEEEEET--TSCEEEEETTTTEEEEEECCCSS---------CEEEEEECTTCSSCEEEEE------TTSCEEECC
T ss_pred CCCCCEEEEEeC--CCeEEEEECCCCcEEEEEcCCCC---------CEEEEEEccCCCceeeeec------cCCceEEEE
Confidence 335554444332 45789999988875432111111 1234566665544433332 234688888
Q ss_pred CCCCCeeeecCC-CCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceee-EeCCCCCCCCCeeeEEE
Q 045675 186 TSTGKWKEVAAG-TGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELPTDCYVKALS 260 (382)
Q Consensus 186 s~t~~W~~~~~~-~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~~ 260 (382)
.+++.-...-.. ...... .++.+ ++.+...+..+ ..|..+|+.+.+-. .+..... ....+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~v----~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~~---~v~~l~~ 277 (357)
T 4g56_B 211 TRKPKPATRIDFCASDTIP----TSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHSQ---NITGLAY 277 (357)
T ss_dssp TTSSSCBCBCCCTTCCSCE----EEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCSS---CEEEEEE
T ss_pred CCCCceeeeeeeccccccc----cchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEeccce---eEEEEEE
Confidence 877643222111 111111 22222 23443333332 46888898775432 2232221 2233333
Q ss_pred e-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEee-CCcEEEEE-cC-eEEEEeCCCC
Q 045675 261 Y-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFR-DSKIIMKS-VD-QFFLFNPKTK 333 (382)
Q Consensus 261 ~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~-~~-~~~~yd~~t~ 333 (382)
. +|.-+++... ....+.||-++.. ..+..+.-...+.-+++.. ++.+++.. .+ .+.+||+.+.
T Consensus 278 sp~~~~~lasgs-------~D~~i~iwd~~~~---~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 278 SYHSSPFLASIS-------EDCTVAVLDADFS---EVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CSSSSCCEEEEE-------TTSCEEEECTTSC---EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred cCCCCCEEEEEe-------CCCEEEEEECCCC---cEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 2 4533333333 2578999976554 3333333223344455553 56655544 44 8999998654
No 78
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.74 E-value=8.2 Score=33.96 Aligned_cols=214 Identities=12% Similarity=0.017 Sum_probs=106.5
Q ss_pred eccCceEEEeeCCCCceeEEEEcccc----ccee-ccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCC
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPAT----NEFK-GLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDA 179 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T----~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~ 179 (382)
+..+|.|...+.. ...++.+++.+ .... .++..-. ...++.+|+..+...+.- ....
T Consensus 38 d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~----------~p~glavd~~~~~ly~~d------~~~~ 99 (316)
T 1ijq_A 38 EVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQ----------APDGLAVDWIHSNIYWTD------SVLG 99 (316)
T ss_dssp ETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCS----------CCCEEEEETTTTEEEEEE------TTTT
T ss_pred EeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCC----------CcCEEEEeecCCeEEEEE------CCCC
Confidence 3446777777654 45788888876 2222 2321111 122677776554433221 1234
Q ss_pred EEEEEECCCCCeeeecCCCCeeEEeCCcceEE-ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeE
Q 045675 180 IAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVA-VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKA 258 (382)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l 258 (382)
.+++++..+..=+.+.......+. .-++. .+|.+||..... ...|.++|+....-..+... .. ...-.|
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~-~~-~~P~gl 169 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE-NI-QWPNGI 169 (316)
T ss_dssp EEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCCEEEEECS-SC-SCEEEE
T ss_pred EEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccCC-----CCeEEEEcCCCCCeEEEEEC-CC-CCceEE
Confidence 777888765432222111111111 11222 378999986532 24899999976544443111 11 123445
Q ss_pred EEe--CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEe-eCCcEEEEEcC--eEEEEeCCC
Q 045675 259 LSY--DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSF-RDSKIIMKSVD--QFFLFNPKT 332 (382)
Q Consensus 259 ~~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~-~~g~l~l~~~~--~~~~yd~~t 332 (382)
+.. +++|+++... ...+.+..++.. -.++. +.. ..+..|.++. .++.||+.... ++..+|+.+
T Consensus 170 a~d~~~~~lY~~D~~--------~~~I~~~d~dg~--~~~~~-~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 170 TLDLLSGRLYWVDSK--------LHSISSIDVNGG--NRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp EEETTTTEEEEEETT--------TTEEEEEETTSC--SCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EEeccCCEEEEEECC--------CCeEEEEecCCC--ceEEE-eecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCC
Confidence 554 6889988765 455655555432 12211 121 2344565554 34557766654 899999976
Q ss_pred Cc-EEEEeeeCCCCCeEEEEEEeeceee
Q 045675 333 KR-NFILPIDSGMGYSYKVFTYVDSIVA 359 (382)
Q Consensus 333 ~~-~~~v~~~~~~~~~~~~~~y~~SLv~ 359 (382)
++ .+.+... ...-..+.+|.++.-|
T Consensus 239 g~~~~~i~~~--~~~p~~i~v~~~~~qp 264 (316)
T 1ijq_A 239 GSDVNLLAEN--LLSPEDMVLFHNLTQP 264 (316)
T ss_dssp CCCCEEEECS--CSCCCCEEEESGGGSC
T ss_pred CcceEEEecC--CCCceEEEEeccccCC
Confidence 65 4444321 1111345566665543
No 79
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=90.74 E-value=7.4 Score=33.44 Aligned_cols=136 Identities=10% Similarity=-0.015 Sum_probs=81.2
Q ss_pred CEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCce-eeEeCCCCCCCCCeee
Q 045675 179 AIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL-FWRTAMPELPTDCYVK 257 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~-~~~i~~P~~~~~~~~~ 257 (382)
..+.+++..+++=...-..+. ..+ + ......++.+|.+.... ..+.+||..+.+ -..++.+.. ...
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~-~~F-g-eGit~~g~~ly~ltw~~------~~v~v~D~~t~~~~~ti~~~~e----G~g 131 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK-RYF-G-EGISDWKDKIVGLTWKN------GLGFVWNIRNLRQVRSFNYDGE----GWG 131 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT-TCC-E-EEEEEETTEEEEEESSS------SEEEEEETTTCCEEEEEECSSC----CCC
T ss_pred ceEEEEECCCCcEEEEEecCC-ccc-e-eEEEEeCCEEEEEEeeC------CEEEEEECccCcEEEEEECCCC----ceE
Confidence 478899999886433222222 112 1 13445678999987765 589999998744 456666542 245
Q ss_pred EEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC----c--ccceEEeeCCcEEEEEcC--eEEEEe
Q 045675 258 ALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER----I--AWPVGSFRDSKIIMKSVD--QFFLFN 329 (382)
Q Consensus 258 l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~----~--~~~~~~~~~g~l~l~~~~--~~~~yd 329 (382)
++..+++|++... +. .||.++-. .-..+.+|.... + ..-+... +|+|+..... .+...|
T Consensus 132 lt~dg~~L~~SdG---------s~--~i~~iDp~-T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 132 LTHNDQYLIMSDG---------TP--VLRFLDPE-SLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEECSSCEEECCS---------SS--EEEEECTT-TCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EecCCCEEEEECC---------CC--eEEEEcCC-CCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 5555666776432 22 57777754 224455554421 1 1113333 7888866643 999999
Q ss_pred CCCCcEEE-Eee
Q 045675 330 PKTKRNFI-LPI 340 (382)
Q Consensus 330 ~~t~~~~~-v~~ 340 (382)
++|++... +.+
T Consensus 199 p~tG~V~~~Id~ 210 (262)
T 3nol_A 199 PETGKVTGIIDL 210 (262)
T ss_dssp TTTCBEEEEEEC
T ss_pred CCCCcEEEEEEC
Confidence 99998654 454
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.39 E-value=5.1 Score=35.68 Aligned_cols=182 Identities=12% Similarity=0.056 Sum_probs=83.8
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC-eeeecCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK-WKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~-W~~~~~~~ 198 (382)
...+.|||..++++..+-...... . ....+.+.+.. .+-+.+- .+..+.+|+..++. |.......
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h~----~---~v~~~~~s~~~-~~l~s~s------~d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDHD----K---IVTCVDWAPKS-NRIVTCS------QDRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCCS----S---CEEEEEECTTT-CCEEEEE------TTSSEEEC------CCCCEEECC
T ss_pred CCEEEEEEccCCceEEEEEEecCC----c---eEEEEEEeCCC-CEEEEEe------CCCeEEEEEcCCCCceeeeeEec
Confidence 457889999887544433332211 1 23456677654 3332221 23478888888776 65443331
Q ss_pred C-eeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCce----eeEeCCCCCCCCCeeeEEEe-CCeEEEEEe
Q 045675 199 G-SCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLEL----FWRTAMPELPTDCYVKALSY-DQSLALAVY 270 (382)
Q Consensus 199 ~-~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~----~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~ 270 (382)
. .... ..+.+ +|.....+..+ ..|..+|+.+.+ ...+..|... ....+... +|++.+...
T Consensus 98 ~~~~~v----~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 98 RLNRAA----TFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRS--TILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CCSSCE----EEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCS--CEEEEEECTTSSEEEEEE
T ss_pred ccCCce----EEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCC--CeEEEEEcCCCCEEEEEe
Confidence 1 1111 11211 45544444333 367788887764 3333332221 23333332 566555555
Q ss_pred cCCCccCCCCCeEEEEEECCCC-------C-eeE-------EEEeecCCcccceEEeeCCcE-EEEEcC-eEEEEeCCCC
Q 045675 271 PGLGFRSRLSNRFELWVMNEGK-------G-WTR-------TFNTAFERIAWPVGSFRDSKI-IMKSVD-QFFLFNPKTK 333 (382)
Q Consensus 271 ~~~~~~~~~~~~~~iW~l~~~~-------~-W~~-------~~~i~~~~~~~~~~~~~~g~l-~l~~~~-~~~~yd~~t~ 333 (382)
. ...+.+|.+...+ . |.. +..+.......-+.+..+|.. +....+ .+.+||++++
T Consensus 166 ~--------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 166 A--------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp S--------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred C--------CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4 5789999985321 0 321 111111111344555567764 444445 8889999888
Q ss_pred cE
Q 045675 334 RN 335 (382)
Q Consensus 334 ~~ 335 (382)
+.
T Consensus 238 ~~ 239 (377)
T 3dwl_C 238 EQ 239 (377)
T ss_dssp TS
T ss_pred CC
Confidence 64
No 81
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=90.36 E-value=8.7 Score=33.61 Aligned_cols=202 Identities=11% Similarity=0.043 Sum_probs=103.7
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
..+..+++.... ...+.++|+.|++... ++......... .......++.+++..+. -++.-.. ....+.++
T Consensus 98 ~dg~~l~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~-l~~~~~~----~~~~i~~~ 169 (353)
T 3vgz_A 98 NTTQTLWFGNTV--NSAVTAIDAKTGEVKGRLVLDDRKRTEE-VRPLQPRELVADDATNT-VYISGIG----KESVIWVV 169 (353)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTTCCEEEEEESCCCCCCSS-CCCCEEEEEEEETTTTE-EEEEEES----SSCEEEEE
T ss_pred CCCCEEEEEecC--CCEEEEEeCCCCeeEEEEecCCCccccc-cCCCCCceEEECCCCCE-EEEEecC----CCceEEEE
Confidence 334445555443 4589999999988533 33321110000 00002346778886553 2222211 23478889
Q ss_pred ECCCCCeee-ecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceee-EeCCCCCC-CCCeeeEEEe
Q 045675 185 STSTGKWKE-VAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELP-TDCYVKALSY 261 (382)
Q Consensus 185 ss~t~~W~~-~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~-~~~~~~l~~~ 261 (382)
+..++.=.. .... ..... .-.+.-+|...++...+ ..|..+|+.+.+.. .+..+... ......+...
T Consensus 170 d~~~~~~~~~~~~~-~~~~~---~~~~s~dg~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 170 DGGNIKLKTAIQNT-GKMST---GLALDSEGKRLYTTNAD------GELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp ETTTTEEEEEECCC-CTTCC---CCEEETTTTEEEEECTT------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred cCCCCceEEEecCC-CCccc---eEEECCCCCEEEEEcCC------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 988764222 1111 00000 12333366544444332 37889999887664 33443221 1122233333
Q ss_pred -CCe-EEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC--eEEEEeCCCCcEE
Q 045675 262 -DQS-LALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD--QFFLFNPKTKRNF 336 (382)
Q Consensus 262 -~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t~~~~ 336 (382)
+|+ |++.... ...+.+|.++.. ..+..++... ...+.+..+|+ +++.... .+.+||.++++..
T Consensus 240 ~dg~~l~~~~~~--------~~~v~~~d~~~~---~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 240 TARQRAFITDSK--------AAEVLVVDTRNG---NILAKVAAPE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp TTTTEEEEEESS--------SSEEEEEETTTC---CEEEEEECSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCC--------CCEEEEEECCCC---cEEEEEEcCC-CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 555 5444332 678888877654 3334444333 23356666777 6666643 8999999988755
Q ss_pred E
Q 045675 337 I 337 (382)
Q Consensus 337 ~ 337 (382)
.
T Consensus 308 ~ 308 (353)
T 3vgz_A 308 K 308 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 82
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=90.09 E-value=9.3 Score=33.56 Aligned_cols=162 Identities=14% Similarity=0.079 Sum_probs=86.6
Q ss_pred EEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC-CCCeeeecCC---CCeeEEeCCcceEEECce-EEEEeecccccc
Q 045675 153 SLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS-TGKWKEVAAG---TGSCVIYGGQDAVAVKGV-LHWIANGIGVLV 227 (382)
Q Consensus 153 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~-t~~W~~~~~~---~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~ 227 (382)
..++.++|..+ ++.. . .....+.+|+.. ++........ ....+. .-++.-+|. +|......
T Consensus 143 ~~~~~~spdg~---l~v~-~---~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~---~~~~spdg~~l~v~~~~~---- 208 (347)
T 3hfq_A 143 IHYTDLTPDNR---LAVI-D---LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPR---HLVFSPDGQYAFLAGELS---- 208 (347)
T ss_dssp EEEEEECTTSC---EEEE-E---TTTTEEEEEEECTTSCEEEEEEEECCTTCCEE---EEEECTTSSEEEEEETTT----
T ss_pred ceEEEECCCCc---EEEE-e---CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCc---eEEECCCCCEEEEEeCCC----
Confidence 34577788765 2221 1 123478889887 5555433221 111111 122333677 55544333
Q ss_pred cccEEEEEECC--CceeeEe----CCCCCCCC--CeeeEEE-eCCe-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeE
Q 045675 228 NEKFVVSYDMN--LELFWRT----AMPELPTD--CYVKALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTR 296 (382)
Q Consensus 228 ~~~~i~~fD~~--~~~~~~i----~~P~~~~~--~~~~l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~ 296 (382)
..|..+|+. +.++..+ ..|..... ....+.. -+|+ |++.... ...+.+|.++.. + +..
T Consensus 209 --~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~--------~~~v~v~~~~~~-g~~~~ 277 (347)
T 3hfq_A 209 --SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG--------YNTLAVFAVTAD-GHLTL 277 (347)
T ss_dssp --TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET--------TTEEEEEEECGG-GCEEE
T ss_pred --CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC--------CCEEEEEEECCC-CcEEE
Confidence 245555544 5665443 23332111 1222333 3676 5554443 678999999864 4 666
Q ss_pred EEEeecC-CcccceEEeeCCc-EEEEEcC--eEEEE--eCCCCcEEEEe
Q 045675 297 TFNTAFE-RIAWPVGSFRDSK-IIMKSVD--QFFLF--NPKTKRNFILP 339 (382)
Q Consensus 297 ~~~i~~~-~~~~~~~~~~~g~-l~l~~~~--~~~~y--d~~t~~~~~v~ 339 (382)
+..++.. .....+.+..+|. |++...+ .+.+| |.++++++.+.
T Consensus 278 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 278 IQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred eEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 6666542 2244566777887 5565543 55555 88899988775
No 83
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.78 E-value=12 Score=34.30 Aligned_cols=185 Identities=11% Similarity=0.016 Sum_probs=95.5
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCe
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGS 200 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~ 200 (382)
..+++||..+++...|..... ....+.+.|... + ++.... ......+.+++..++..+.+......
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~----------~v~~~~~Spdg~-~-la~~s~--~~~~~~i~~~d~~tg~~~~l~~~~~~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ----------PLMSPAWSPDGS-K-LAYVTF--ESGRSALVIQTLANGAVRQVASFPRH 224 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS----------CEEEEEECTTSS-E-EEEEEC--TTSSCEEEEEETTTCCEEEEECCSSC
T ss_pred ceEEEEcCCCCCCEEEeCCCC----------cceeeEEcCCCC-E-EEEEEe--cCCCcEEEEEECCCCcEEEeecCCCc
Confidence 689999987766555433221 133566677543 2 222221 12235899999998876654433211
Q ss_pred eEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCC
Q 045675 201 CVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSR 278 (382)
Q Consensus 201 ~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~ 278 (382)
.. .....-+|. +.+....+ ....|..+|+.+.+...+..... ....+.- -+|+..++... .
T Consensus 225 -~~---~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~--~---- 287 (415)
T 2hqs_A 225 -NG---APAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSD--Q---- 287 (415)
T ss_dssp -EE---EEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEEC--T----
T ss_pred -cc---CEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEEC--C----
Confidence 11 122223565 55454433 13479999998877655432111 2223332 36764444443 1
Q ss_pred CCCeEEEEEECCCCCeeEEEEeecC-CcccceEEeeCCc-EEEEEcC----eEEEEeCCCCcEEEEe
Q 045675 279 LSNRFELWVMNEGKGWTRTFNTAFE-RIAWPVGSFRDSK-IIMKSVD----QFFLFNPKTKRNFILP 339 (382)
Q Consensus 279 ~~~~~~iW~l~~~~~W~~~~~i~~~-~~~~~~~~~~~g~-l~l~~~~----~~~~yd~~t~~~~~v~ 339 (382)
....+||.++-..+ . ...+... .....+.+..+|+ |++...+ .++.+|+++++.+.+.
T Consensus 288 -~g~~~i~~~d~~~~-~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 288 -AGRPQVYKVNINGG-A-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp -TSSCEEEEEETTSS-C-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred -CCCcEEEEEECCCC-C-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 23345555543312 1 1122111 1122345556777 5555432 7999999999887653
No 84
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.61 E-value=9.4 Score=32.90 Aligned_cols=135 Identities=7% Similarity=-0.052 Sum_probs=80.1
Q ss_pred EEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeE
Q 045675 180 IAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKA 258 (382)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l 258 (382)
.+.+++..+++=...- .++ ..+ + ......++.+|-+...+ ..+.+||..+.+- ..++.+.. ...|
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~-~~F-g-eGit~~g~~Ly~ltw~~------~~v~V~D~~Tl~~~~ti~~~~e----GwGL 141 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLG-NIF-A-EGLASDGERLYQLTWTE------GLLFTWSGMPPQRERTTRYSGE----GWGL 141 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECT-TCC-E-EEEEECSSCEEEEESSS------CEEEEEETTTTEEEEEEECSSC----CCCE
T ss_pred EEEEEECCCCcEEeEE-CCC-Ccc-e-eEEEEeCCEEEEEEccC------CEEEEEECCcCcEEEEEeCCCc----eeEE
Confidence 4888888887532222 211 111 1 13445567888887665 5899999987544 55666543 2456
Q ss_pred EEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCc------ccceEEeeCCcEEEEEcC--eEEEEeC
Q 045675 259 LSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERI------AWPVGSFRDSKIIMKSVD--QFFLFNP 330 (382)
Q Consensus 259 ~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~------~~~~~~~~~g~l~l~~~~--~~~~yd~ 330 (382)
+..+++|++.... . .|+.++-. .=..+.+|....- ..-+.. .+|+|+..... .+...|+
T Consensus 142 t~Dg~~L~vSdGs---------~--~l~~iDp~-T~~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 142 CYWNGKLVRSDGG---------T--MLTFHEPD-GFALVGAVQVKLRGQPVELINELEC-ANGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EEETTEEEEECSS---------S--EEEEECTT-TCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTCSEEEEECT
T ss_pred ecCCCEEEEECCC---------C--EEEEEcCC-CCeEEEEEEeCCCCcccccccccEE-eCCEEEEEECCCCeEEEEeC
Confidence 6667778776532 2 56777754 2244555543221 112232 37788866643 9999999
Q ss_pred CCCcEE-EEeee
Q 045675 331 KTKRNF-ILPID 341 (382)
Q Consensus 331 ~t~~~~-~v~~~ 341 (382)
+|++.. .+.+.
T Consensus 209 ~TG~V~~~Idl~ 220 (268)
T 3nok_A 209 ATGTVVGVIDAS 220 (268)
T ss_dssp TTCBEEEEEECH
T ss_pred CCCcEEEEEECC
Confidence 999865 45543
No 85
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.45 E-value=11 Score=33.55 Aligned_cols=194 Identities=10% Similarity=-0.028 Sum_probs=86.1
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS 187 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~ 187 (382)
+|.++.... ...+.|||..+++............ .. ....+.+.|.. .+-+.+. .+..+.+++..
T Consensus 105 d~~~l~~s~---dg~v~lWd~~~~~~~~~~~~~~~~h---~~--~V~~v~~spdg-~~l~sgs------~dg~v~iwd~~ 169 (357)
T 4g56_B 105 EKGILVASD---SGAVELWEILEKESLLVNKFAKYEH---DD--IVKTLSVFSDG-TQAVSGG------KDFSVKVWDLS 169 (357)
T ss_dssp TTEEEEEET---TSCEEEC--------CCCCEEECCC---SS--CEEEEEECSSS-SEEEEEE------TTSCEEEEETT
T ss_pred CCCEEEEEC---CCEEEEeeccccceeEEEeeccCCC---CC--CEEEEEECCCC-CEEEEEe------CCCeEEEEECC
Confidence 555554444 4579999999887554433221110 11 23356666643 3333221 23478888888
Q ss_pred CCCeeeecCCCCeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEe--C
Q 045675 188 TGKWKEVAAGTGSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSY--D 262 (382)
Q Consensus 188 t~~W~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~--~ 262 (382)
++.-...-.... ... .++. -+|.-+.+.... ...|..+|+.+.+.... ...... .....+.-. +
T Consensus 170 ~~~~~~~~~~h~-~~v----~~v~~s~~~~~~~~s~~~-----dg~v~~wd~~~~~~~~~~~~~~~~-~~v~~v~~sp~~ 238 (357)
T 4g56_B 170 QKAVLKSYNAHS-SEV----NCVAACPGKDTIFLSCGE-----DGRILLWDTRKPKPATRIDFCASD-TIPTSVTWHPEK 238 (357)
T ss_dssp TTEEEEEECCCS-SCE----EEEEECTTCSSCEEEEET-----TSCEEECCTTSSSCBCBCCCTTCC-SCEEEEEECTTS
T ss_pred CCcEEEEEcCCC-CCE----EEEEEccCCCceeeeecc-----CCceEEEECCCCceeeeeeecccc-ccccchhhhhcc
Confidence 764322111100 001 1222 233322222222 23688888877654322 222111 112223322 3
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCC-cEEE-EEcC-eEEEEeCCCCcEEEE
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDS-KIIM-KSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g-~l~l-~~~~-~~~~yd~~t~~~~~v 338 (382)
+.+.+.... ...+.+|.+.... ....+.. ..-+.-+.+..++ .++. ...+ .+.+||+++++....
T Consensus 239 ~~~la~g~~--------d~~i~~wd~~~~~---~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 239 DDTFACGDE--------TGNVSLVNIKNPD---SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp TTEEEEEES--------SSCEEEEESSCGG---GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cceEEEeec--------ccceeEEECCCCc---EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 455544443 6789999887651 2222221 1113334555555 3444 3444 899999998876543
No 86
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.45 E-value=5.2 Score=36.63 Aligned_cols=121 Identities=9% Similarity=-0.005 Sum_probs=72.2
Q ss_pred ECceEEEEeecccccccccEEEEEECCCceeeEeC-CC--------CCC-CCCeeeEEE--eCCeEEEEEecCCCccCCC
Q 045675 212 VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTA-MP--------ELP-TDCYVKALS--YDQSLALAVYPGLGFRSRL 279 (382)
Q Consensus 212 ~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~-~P--------~~~-~~~~~~l~~--~~g~L~~~~~~~~~~~~~~ 279 (382)
.+|.++|.+..+ .+.++|+.++.-..+. .. ... .+....++. -+++|++..... ..+.+.
T Consensus 236 ~dG~~~~vs~~g-------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~-~~~~hk 307 (386)
T 3sjl_D 236 KAGRLVWPTYTG-------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR-DEWRHK 307 (386)
T ss_dssp TTTEEEEEBTTS-------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC-CTTCTT
T ss_pred CCCcEEEEeCCC-------EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc-cccccC
Confidence 378999987755 7999999877543321 10 000 001112333 356788876531 112223
Q ss_pred CCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEE-Ec--CeEEEEeCCCCcEEE-Eeee
Q 045675 280 SNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMK-SV--DQFFLFNPKTKRNFI-LPID 341 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~-~~--~~~~~yd~~t~~~~~-v~~~ 341 (382)
...=+||+++-. .+..+.+|++..-...+.+..++. +++. .. +.+.+||.++++..+ +...
T Consensus 308 ~~~~~V~viD~~-t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 308 TASRFVVVLDAK-TGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp SCEEEEEEEETT-TCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred CCCCEEEEEECC-CCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 445789999875 467777787654344577777775 5444 43 289999999987543 4443
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=89.19 E-value=13 Score=33.79 Aligned_cols=183 Identities=8% Similarity=-0.040 Sum_probs=90.0
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCC--CCCEEEEEECCCCCeeeecCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQAR--YDAIAEVYSTSTGKWKEVAAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~--~~~~~~vyss~t~~W~~~~~~ 197 (382)
...+.+||+.+++....-.... ...++.++|..+ +-++........ .+..+.+|+..++.-......
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~ 301 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDKIG----------LPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP 301 (433)
T ss_dssp TTEEEEEETTTTEEEEECCCCS----------EEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCC----------CceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCCcEEeeccC
Confidence 4578889988877654322221 233566676543 333333221111 234888999887643221110
Q ss_pred CCeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEEe-CCeEEEEEecCCC
Q 045675 198 TGSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALSY-DQSLALAVYPGLG 274 (382)
Q Consensus 198 ~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~ 274 (382)
. .... .....-+|. +|..+..+ ..|..+|+.+.+... ++... ....+... +|+..++.... .
T Consensus 302 ~-~~~~---~~~~~~~g~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~-~ 366 (433)
T 3bws_A 302 P-GNKR---HIVSGNTENKIYVSDMCC------SKIEVYDLKEKKVQKSIPVFD----KPNTIALSPDGKYLYVSCRG-P 366 (433)
T ss_dssp E-ECEE---EEEECSSTTEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEECC-C
T ss_pred C-CCcc---eEEECCCCCEEEEEecCC------CEEEEEECCCCcEEEEecCCC----CCCeEEEcCCCCEEEEEecC-C
Confidence 0 0000 112222464 55543333 489999998765433 33211 22334333 56544444330 1
Q ss_pred cc--------CCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEE-EEEc-C-eEEEEeCC
Q 045675 275 FR--------SRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKII-MKSV-D-QFFLFNPK 331 (382)
Q Consensus 275 ~~--------~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~-l~~~-~-~~~~yd~~ 331 (382)
.. ......+.+|.++.. ..+..++.......+.+..+|..+ .... + .+.+||++
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTD---TVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTT---EEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CccccccccccccceEEEEEECCCC---cEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 00 001237888877654 444445443334445666677744 4443 3 88888875
No 88
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=89.08 E-value=9.7 Score=32.36 Aligned_cols=189 Identities=9% Similarity=0.143 Sum_probs=96.6
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
..+|.|.+..... ...+.++|+..+....+...... ...++.+|+... ..|. . .....+.+|+
T Consensus 86 ~~~g~l~v~~~~~-~~~i~~~d~~g~~~~~~~~~~~~---------~~~~i~~~~~g~-l~v~---~---~~~~~i~~~~ 148 (286)
T 1q7f_A 86 RNSGDIIVTERSP-THQIQIYNQYGQFVRKFGATILQ---------HPRGVTVDNKGR-IIVV---E---CKVMRVIIFD 148 (286)
T ss_dssp TTTTEEEEEECGG-GCEEEEECTTSCEEEEECTTTCS---------CEEEEEECTTSC-EEEE---E---TTTTEEEEEC
T ss_pred cCCCeEEEEcCCC-CCEEEEECCCCcEEEEecCccCC---------CceEEEEeCCCC-EEEE---E---CCCCEEEEEc
Confidence 3577776665310 34788899654444444332211 133677777542 2221 1 1234677887
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eC
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YD 262 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~ 262 (382)
.....-+.......... ..++.+ +|.+|...... ..|..||...+....+..+... .....++. .+
T Consensus 149 ~~g~~~~~~~~~~~~~~----p~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~g~~-~~p~~i~~d~~ 217 (286)
T 1q7f_A 149 QNGNVLHKFGCSKHLEF----PNGVVVNDKQEIFISDNRA------HCVKVFNYEGQYLRQIGGEGIT-NYPIGVGINSN 217 (286)
T ss_dssp TTSCEEEEEECTTTCSS----EEEEEECSSSEEEEEEGGG------TEEEEEETTCCEEEEESCTTTS-CSEEEEEECTT
T ss_pred CCCCEEEEeCCCCccCC----cEEEEECCCCCEEEEECCC------CEEEEEcCCCCEEEEEccCCcc-CCCcEEEECCC
Confidence 65443333321100000 123333 57876654332 4899999987766666443211 12334544 37
Q ss_pred CeEEEEEecCCCccCCCCC-eEEEEEECCCCCeeEEEEeecCC-cccceEEeeCCcEEEEEcC-eEEEEeCCC
Q 045675 263 QSLALAVYPGLGFRSRLSN-RFELWVMNEGKGWTRTFNTAFER-IAWPVGSFRDSKIIMKSVD-QFFLFNPKT 332 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~-~~~iW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~g~l~l~~~~-~~~~yd~~t 332 (382)
|.|++.... .. .+.+|..+. .-.......... ....+++..+|.+++...+ .+.+|+...
T Consensus 218 G~l~v~~~~--------~~~~i~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 218 GEILIADNH--------NNFNLTIFTQDG--QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp CCEEEEECS--------SSCEEEEECTTS--CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCEEEEeCC--------CCEEEEEECCCC--CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 888887765 33 778775322 122222222111 1223555667888877655 777887654
No 89
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=88.99 E-value=11 Score=32.89 Aligned_cols=180 Identities=7% Similarity=-0.025 Sum_probs=90.3
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCee-eecCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWK-EVAAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~-~~~~~ 197 (382)
...+.++|+.|++... ++.... ..++.+++..+ +.++.- . ....+.+++..++.-. .....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----------~~~~~~s~dg~-~l~v~~-~----~~~~v~~~d~~~~~~~~~~~~~ 130 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----------PFGATINNTTQ-TLWFGN-T----VNSAVTAIDAKTGEVKGRLVLD 130 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----------CCSEEEETTTT-EEEEEE-T----TTTEEEEEETTTCCEEEEEESC
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----------cceEEECCCCC-EEEEEe-c----CCCEEEEEeCCCCeeEEEEecC
Confidence 4579999999987544 332111 11355666543 222221 1 2347889998877532 22221
Q ss_pred --CC-----e-eEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEE-EeCCeEEE
Q 045675 198 --TG-----S-CVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKAL-SYDQSLAL 267 (382)
Q Consensus 198 --~~-----~-~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~-~~~g~L~~ 267 (382)
.. + ... .-.+.-+|...++...+. ...|..+|+.+.+... ++..... ...+. .-+|+..+
T Consensus 131 ~~~~~~~~~~~~~~---~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 131 DRKRTEEVRPLQPR---ELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTGKM---STGLALDSEGKRLY 200 (353)
T ss_dssp CCCCCSSCCCCEEE---EEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCCTT---CCCCEEETTTTEEE
T ss_pred CCccccccCCCCCc---eEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCCCc---cceEEECCCCCEEE
Confidence 10 0 011 112233565444443221 2479999998876543 3422211 11222 23555433
Q ss_pred EEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC-----cccceEEeeCCc-EEEEEcC--eEEEEeCCCCcEEE
Q 045675 268 AVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER-----IAWPVGSFRDSK-IIMKSVD--QFFLFNPKTKRNFI 337 (382)
Q Consensus 268 ~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-----~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t~~~~~ 337 (382)
+... ...+.+|.+... .....++... ...-+.+..+|. +++.... .+..||+++++...
T Consensus 201 ~~~~--------~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 201 TTNA--------DGELITIDTADN---KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp EECT--------TSEEEEEETTTT---EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred EEcC--------CCeEEEEECCCC---eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 3333 456667766554 3333343311 122356666777 5555543 89999999887544
No 90
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=88.74 E-value=11 Score=32.44 Aligned_cols=194 Identities=11% Similarity=0.059 Sum_probs=94.1
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeee-cCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEV-AAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~-~~~~ 198 (382)
...++++||.+++...+..+..... .. ...++.+++..+...|. . ....+.+|+.. +..+.. ....
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~---~~--~~~~i~~~~~~g~l~v~---~----~~~~l~~~d~~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGY---GG--IPAGCQCDRDANQLFVA---D----MRLGLLVVQTD-GTFEEIAKKDS 111 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTE---EC--CEEEEEECSSSSEEEEE---E----TTTEEEEEETT-SCEEECCSBCT
T ss_pred CCEEEEEeCCCCcEEEEEecccCCC---CC--CCceEEEecCCCcEEEE---E----CCCCEEEEeCC-CCEEEEEeccC
Confidence 3478999999988776543110000 01 23466777653332221 1 11268888887 666544 2221
Q ss_pred CeeEEeCCcceEEE--CceEEEEeeccc---------ccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-----eC
Q 045675 199 GSCVIYGGQDAVAV--KGVLHWIANGIG---------VLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-----YD 262 (382)
Q Consensus 199 ~~~~~~~~~~~v~~--~G~lywl~~~~~---------~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-----~~ 262 (382)
..... ..-..+.+ +|.+|+...... .......|..+|.. .++..+.-... ....++. -+
T Consensus 112 ~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---~~~~i~~~~~~d~d 186 (314)
T 1pjx_A 112 EGRRM-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ---FPNGIAVRHMNDGR 186 (314)
T ss_dssp TSCBC-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES---SEEEEEEEECTTSC
T ss_pred CCccc-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC---CcceEEEecccCCC
Confidence 10000 00123333 577766543220 00012478999987 55544311100 1122332 35
Q ss_pred Ce-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe-ecC----CcccceEEeeCCcEEEEEc--CeEEEEeCCCC
Q 045675 263 QS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT-AFE----RIAWPVGSFRDSKIIMKSV--DQFFLFNPKTK 333 (382)
Q Consensus 263 g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i-~~~----~~~~~~~~~~~g~l~l~~~--~~~~~yd~~t~ 333 (382)
|+ |++.... ...+.+|.++.. + ......+ .+. ....-+++..+|.|++... +.+..||++++
T Consensus 187 g~~l~v~~~~--------~~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 187 PYQLIVAETP--------TKKLWSYDIKGP-AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EEEEEEEETT--------TTEEEEEEEEET-TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CCEEEEEECC--------CCeEEEEECCCC-CccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 53 5555443 567777776632 3 3322211 222 1122344456778888763 38999999955
Q ss_pred c-EEEEee
Q 045675 334 R-NFILPI 340 (382)
Q Consensus 334 ~-~~~v~~ 340 (382)
+ ...+..
T Consensus 258 ~~~~~~~~ 265 (314)
T 1pjx_A 258 QPKMRIRC 265 (314)
T ss_dssp SCSEEEEC
T ss_pred cEeEEEeC
Confidence 4 444443
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.70 E-value=11 Score=32.59 Aligned_cols=100 Identities=6% Similarity=-0.032 Sum_probs=55.5
Q ss_pred cEEEEEECCC-ceeeE-----eCCCCCCCCCeeeEEE-eCCe-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe
Q 045675 230 KFVVSYDMNL-ELFWR-----TAMPELPTDCYVKALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT 300 (382)
Q Consensus 230 ~~i~~fD~~~-~~~~~-----i~~P~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i 300 (382)
..|..||+.+ .+... +..+... ....+.. -+|+ |++.... ...+.+|.++...+ +.....+
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~pdg~~l~~~~~~--------~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGA--GPRHMVFHPNEQYAYCVNEL--------NSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTC--CEEEEEECTTSSEEEEEETT--------TTEEEEEESSCTTSCCEEEEEE
T ss_pred CEEEEEEecCCCceeeecccccccCCCC--CcceEEECCCCCEEEEEeCC--------CCEEEEEEecCCCCcEEEEeec
Confidence 4789999987 65542 3333221 2222333 3666 4444333 67899999975434 5544444
Q ss_pred e-cCC----c--ccceEEeeCCc-EEEEEcC--eEEEEeCC--CCcEEEEe
Q 045675 301 A-FER----I--AWPVGSFRDSK-IIMKSVD--QFFLFNPK--TKRNFILP 339 (382)
Q Consensus 301 ~-~~~----~--~~~~~~~~~g~-l~l~~~~--~~~~yd~~--t~~~~~v~ 339 (382)
. +.. . ...+.+..+|+ |++.... .+.+||++ +++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 2 111 1 12355666776 5545532 88889887 55666653
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=87.62 E-value=16 Score=33.00 Aligned_cols=178 Identities=10% Similarity=0.098 Sum_probs=95.3
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.|||..+++...+-..... . ....+.+.+. +.+-+++. .+..+.+|+..++.-...-....
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~------~--~v~~v~~s~~-~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~ 176 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDES------T--YVASVKWSHD-GSFLSVGL------GNGLVDIYDVESQTKLRTMAGHQ 176 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTT------C--CEEEEEECTT-SSEEEEEE------TTSCEEEEETTTCCEEEEECCCS
T ss_pred CCeEEEeeCCCCcEeEeeecCCC------C--CEEEEEECCC-CCEEEEEC------CCCeEEEEECcCCeEEEEecCCC
Confidence 34899999999987654433211 1 2345667773 34433332 23478999988765322211111
Q ss_pred eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCce--eeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCcc
Q 045675 200 SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL--FWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFR 276 (382)
Q Consensus 200 ~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~--~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~ 276 (382)
... ..+..+|.+...+..+ ..|..+|+.+.. ...+..... ....+... +|.+.+....
T Consensus 177 -~~v----~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~----- 237 (401)
T 4aez_A 177 -ARV----GCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQGHSS---EVCGLAWRSDGLQLASGGN----- 237 (401)
T ss_dssp -SCE----EEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS---CEEEEEECTTSSEEEEEET-----
T ss_pred -Cce----EEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcCCCC---CeeEEEEcCCCCEEEEEeC-----
Confidence 111 3344466655554443 588899997432 222221111 22333332 5666555554
Q ss_pred CCCCCeEEEEEECCCCCeeEEEEee-cCCcccceEEeeCCc-EEEEEc---C-eEEEEeCCCCcEEE
Q 045675 277 SRLSNRFELWVMNEGKGWTRTFNTA-FERIAWPVGSFRDSK-IIMKSV---D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 277 ~~~~~~~~iW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~g~-l~l~~~---~-~~~~yd~~t~~~~~ 337 (382)
...+.+|.+... ..+..+. .......+.+..++. ++.... + .+.+||+++++...
T Consensus 238 ---d~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 238 ---DNVVQIWDARSS---IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp ---TSCEEEEETTCS---SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred ---CCeEEEccCCCC---CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 678999998765 2333332 222244555555554 655543 3 89999998876443
No 93
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.50 E-value=4.5 Score=40.35 Aligned_cols=136 Identities=17% Similarity=0.079 Sum_probs=68.0
Q ss_pred CEEEEEECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCe
Q 045675 179 AIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCY 255 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~ 255 (382)
..+.+++..+..-+.+...... . ..++.+ +|.|||..... ...|.++|+....-..+... .. ...
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~----~-P~giavDp~~g~ly~td~~~-----~~~I~~~~~dG~~~~~l~~~-~l-~~P 542 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGS----K-PRAIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE-NI-QWP 542 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSC----C-CCCEECCSSSSCCEECCCSS-----SCCEEBCCSSSCCCCEESCS-SC-SSC
T ss_pred CeEEEEecCCCceEEEEeCCCC----C-cceEEEccCCCcEEEcccCC-----CCeEEEEeCCCCCeeEEEeC-CC-CCc
Confidence 3567777665433332211000 1 133444 68999976432 24788888865444333111 11 022
Q ss_pred eeEEEe--CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCC-cEEEEEcC--eEEEEe
Q 045675 256 VKALSY--DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDS-KIIMKSVD--QFFLFN 329 (382)
Q Consensus 256 ~~l~~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g-~l~l~~~~--~~~~yd 329 (382)
-.|+.. +++|+++... ...|.+..++.. . .++ .+.. ..+..|.++.-++ .||+.... +|..+|
T Consensus 543 nGlavd~~~~~LY~aD~~--------~~~I~~~d~dG~-~-~~~-~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSK--------LHSISSIDVNGG-N-RKT-ILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp CCEEECTTTCCEEEEETT--------TTEEEEECSSSS-C-CEE-ECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEE
T ss_pred cEEEEeccCCEEEEEecC--------CCeEEEEccCCC-c-eEE-EEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEE
Confidence 234543 6788887765 445544444332 1 111 1221 2234455544333 46655543 899999
Q ss_pred CCCCcEEE
Q 045675 330 PKTKRNFI 337 (382)
Q Consensus 330 ~~t~~~~~ 337 (382)
+.+++...
T Consensus 612 ~~~G~~~~ 619 (699)
T 1n7d_A 612 RLTGSDVN 619 (699)
T ss_dssp TTTEEEEE
T ss_pred ccCCCceE
Confidence 98776544
No 94
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.16 E-value=13 Score=31.61 Aligned_cols=184 Identities=10% Similarity=0.054 Sum_probs=89.4
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS 187 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~ 187 (382)
+++|+.... ...+.|||..+++....-..... ....+.+.+.. .+-+++. .+..+.+++..
T Consensus 29 ~~~l~s~~~---dg~v~vw~~~~~~~~~~~~~~~~---------~v~~~~~~~~~-~~l~~~~------~dg~i~~~~~~ 89 (313)
T 3odt_A 29 DSKVASVSR---DGTVRLWSKDDQWLGTVVYTGQG---------FLNSVCYDSEK-ELLLFGG------KDTMINGVPLF 89 (313)
T ss_dssp TTEEEEEET---TSEEEEEEESSSEEEEEEEECSS---------CEEEEEEETTT-TEEEEEE------TTSCEEEEETT
T ss_pred CCEEEEEEc---CCcEEEEECCCCEEEEEeecCCc---------cEEEEEECCCC-CEEEEec------CCCeEEEEEee
Confidence 445544444 45789999877664432221111 23356666643 3333332 22366777765
Q ss_pred CCC-eeeecCCCC-eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE--EeCC
Q 045675 188 TGK-WKEVAAGTG-SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL--SYDQ 263 (382)
Q Consensus 188 t~~-W~~~~~~~~-~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~--~~~g 263 (382)
... .+....... .... ..+..+|.....+..+ ..|..+|... ....+..... ....+. ..++
T Consensus 90 ~~~~~~~~~~~~~~~~~i----~~~~~~~~~l~~~~~d------~~i~~~d~~~-~~~~~~~~~~---~v~~~~~~~~~~ 155 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNV----CSLSFQDGVVISGSWD------KTAKVWKEGS-LVYNLQAHNA---SVWDAKVVSFSE 155 (313)
T ss_dssp CCTTSCC-CEECCCSSCE----EEEEEETTEEEEEETT------SEEEEEETTE-EEEEEECCSS---CEEEEEEEETTT
T ss_pred ecCCCCcccchhhcccCE----EEEEecCCEEEEEeCC------CCEEEEcCCc-EEEecccCCC---ceeEEEEccCCC
Confidence 431 111111111 1111 3334456555544443 4788888322 2222222211 122222 2256
Q ss_pred eEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee--cCCcccceEEeeCCcEEEEEcC-eEEEEeCCCCcEEE
Q 045675 264 SLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA--FERIAWPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 264 ~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~--~~~~~~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
.+.++... ...+.+|... .....+. .......+.+..++.++....+ .+..||+++++...
T Consensus 156 ~~l~~~~~--------d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 156 NKFLTASA--------DKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp TEEEEEET--------TSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEEEC--------CCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhh
Confidence 66655554 6788999722 1222222 2233455666677775555555 89999998876443
No 95
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=86.67 E-value=16 Score=32.06 Aligned_cols=176 Identities=9% Similarity=0.025 Sum_probs=88.9
Q ss_pred eEEEEcccccceecc-CCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC----CCeeeecC
Q 045675 122 AFVLWNPATNEFKGL-PTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST----GKWKEVAA 196 (382)
Q Consensus 122 ~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t----~~W~~~~~ 196 (382)
.+...++.+++...+ |... ...++.+|+..+...+.-. ....+..++..+ ..-+.+-.
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~-----------~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLR-----------NVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp SEEEEETTSCCCEEEECSCS-----------SEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEEC
T ss_pred eEEEEECCCcceEehhcCCC-----------ceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEe
Confidence 567778777765443 3222 2447888876654332221 234677777665 11121111
Q ss_pred CCCeeEEeCCcceEE---ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--CCeEEEEEec
Q 045675 197 GTGSCVIYGGQDAVA---VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--DQSLALAVYP 271 (382)
Q Consensus 197 ~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~ 271 (382)
. ... . ..++. .+|.+||..... ..|.++|+....-..+.-. .. .....+++. +|.|++....
T Consensus 74 ~--~~~--~-p~glavd~~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~-~~-~~P~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 74 R--DIQ--A-PDGLAVDWIHSNIYWTDSVL------GTVSVADTKGVKRKTLFRE-NG-SKPRAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp S--SCS--C-CCEEEEETTTTEEEEEETTT------TEEEEEETTSSSEEEEEEC-TT-CCEEEEEEETTTTEEEEEECS
T ss_pred C--CCC--C-cCEEEEeecCCeEEEEECCC------CEEEEEeCCCCceEEEEEC-CC-CCcceEEeCCCCCEEEEEccC
Confidence 0 000 1 12333 368999986543 4899999987654433211 11 133445553 6788877653
Q ss_pred CCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEE--ee-CCcEEEEEcC--eEEEEeCCCCcEEEE
Q 045675 272 GLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGS--FR-DSKIIMKSVD--QFFLFNPKTKRNFIL 338 (382)
Q Consensus 272 ~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~--~~-~g~l~l~~~~--~~~~yd~~t~~~~~v 338 (382)
....+....++.. -.++ +-...+..|-++ .. ++.||+.... ++..+|+.+...+.+
T Consensus 141 -------~~~~I~~~~~dG~--~~~~--~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 141 -------TPAKIKKGGLNGV--DIYS--LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp -------SSCEEEEEETTSC--CEEE--EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -------CCCeEEEEcCCCC--CeEE--EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 1234433333332 1221 211234445444 32 3457776654 899999987655554
No 96
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.60 E-value=26 Score=34.43 Aligned_cols=95 Identities=12% Similarity=0.102 Sum_probs=58.2
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWP 308 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~ 308 (382)
..|..+|+.+.+......... .....+... +|++.+.... ...+.||.+... ..+..+........
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~--~~v~~v~~spdg~~l~sg~~--------Dg~i~iwd~~~~---~~~~~~~~~~~v~~ 607 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHT--GYVSTVAVSPDGSLCASGGK--------DGVVLLWDLAEG---KKLYSLEANSVIHA 607 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEET--------TSBCEEEETTTT---EEEECCBCSSCEEE
T ss_pred CeEEEEECCCCcEEEEEcCCC--CCEEEEEEeCCCCEEEEEeC--------CCeEEEEECCCC---ceEEEecCCCcEEE
Confidence 478889998765543321111 122333333 6776665554 678999998876 34444443344555
Q ss_pred eEEeeCCcEEEEEcC-eEEEEeCCCCcEEE
Q 045675 309 VGSFRDSKIIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 309 ~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
+++..++.++....+ .+.+||+++++...
T Consensus 608 ~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 608 LCFSPNRYWLCAATEHGIKIWDLESKSIVE 637 (694)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EEEcCCCcEEEEEcCCCEEEEECCCCCChh
Confidence 666677776655554 89999999987543
No 97
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=86.16 E-value=11 Score=32.92 Aligned_cols=113 Identities=7% Similarity=-0.008 Sum_probs=62.3
Q ss_pred ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 212 VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 212 ~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
-+|.+||..... ..|..+|+.+.++..+..+... ....+.. -+|+|++.... .. ..... |+.++.
T Consensus 54 ~~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~--~~~~i~~~~dg~l~v~~~~--~~--~~~~~--i~~~d~ 119 (333)
T 2dg1_A 54 RQGQLFLLDVFE------GNIFKINPETKEIKRPFVSHKA--NPAAIKIHKDGRLFVCYLG--DF--KSTGG--IFAATE 119 (333)
T ss_dssp TTSCEEEEETTT------CEEEEECTTTCCEEEEEECSSS--SEEEEEECTTSCEEEEECT--TS--SSCCE--EEEECT
T ss_pred CCCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCCC--CcceEEECCCCcEEEEeCC--CC--CCCce--EEEEeC
Confidence 468888876543 4799999998888765322111 2344444 37888877654 10 01134 444543
Q ss_pred CCCeeE-EEE-eecCCcccceEEeeCCcEEEEEc--------CeEEEEeCCCCcEEEE
Q 045675 291 GKGWTR-TFN-TAFERIAWPVGSFRDSKIIMKSV--------DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 291 ~~~W~~-~~~-i~~~~~~~~~~~~~~g~l~l~~~--------~~~~~yd~~t~~~~~v 338 (382)
..+... ... .........+.+..+|.+++... ..++.||+++++.+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 312221 111 11111123345556777887764 2799999988776654
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=86.10 E-value=16 Score=31.61 Aligned_cols=180 Identities=10% Similarity=-0.016 Sum_probs=91.9
Q ss_pred ceeEEEEcc-cccceeccCC--CCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC------
Q 045675 120 GMAFVLWNP-ATNEFKGLPT--PSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK------ 190 (382)
Q Consensus 120 ~~~~~V~NP-~T~~~~~LP~--~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~------ 190 (382)
...+.+||. .+++...+.. ... ....+.+.+ +.+.+.+. .+..+.+|+..+..
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~~~----------~v~~l~~~~--~~~l~s~~------~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEANL----------GICRICKYG--DDKLIAAS------WDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCS----------CEEEEEEET--TTEEEEEE------TTSEEEEECHHHHTTBCEEE
T ss_pred CCeEEEEEeccCCceEeccccCCCC----------ceEEEEeCC--CCEEEEEc------CCCeEEEEcccccccccccc
Confidence 458999999 8888776655 222 233567777 44444332 23478888765400
Q ss_pred -eeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCC-ce--eeEeCCCCCCCCCeeeEEEe--CCe
Q 045675 191 -WKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNL-EL--FWRTAMPELPTDCYVKALSY--DQS 264 (382)
Q Consensus 191 -W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~-~~--~~~i~~P~~~~~~~~~l~~~--~g~ 264 (382)
.+........... .++.+++.....+.. ...|..+|+.+ .. ......+... ....+... +|.
T Consensus 140 ~~~~~~~~~~~~~v----~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 140 KNLNSNNTKVKNKI----FTMDTNSSRLIVGMN------NSQVQWFRLPLCEDDNGTIEESGLKY--QIRDVALLPKEQE 207 (342)
T ss_dssp EESCSSSSSSCCCE----EEEEECSSEEEEEES------TTEEEEEESSCCTTCCCEEEECSCSS--CEEEEEECSGGGC
T ss_pred cCCeeeEEeeCCce----EEEEecCCcEEEEeC------CCeEEEEECCccccccceeeecCCCC--ceeEEEECCCCCC
Confidence 1111111111111 223333222222222 24899999987 32 3333333222 23334443 566
Q ss_pred EEEEEecCCCccCCCCCeEEEEEECCC--CC-eeEEEEeecC----------CcccceEEeeCCcEE-EEEcC-eEEEEe
Q 045675 265 LALAVYPGLGFRSRLSNRFELWVMNEG--KG-WTRTFNTAFE----------RIAWPVGSFRDSKII-MKSVD-QFFLFN 329 (382)
Q Consensus 265 L~~~~~~~~~~~~~~~~~~~iW~l~~~--~~-W~~~~~i~~~----------~~~~~~~~~~~g~l~-l~~~~-~~~~yd 329 (382)
+.++... ...+.||.++.. .. ......+... .....+.+..++..+ ....+ .+.+||
T Consensus 208 ~l~~~~~--------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 208 GYACSSI--------DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EEEEEET--------TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EEEEEec--------CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 6666554 678999998765 10 1112222111 023345555667644 44444 899999
Q ss_pred CCCCcEEE
Q 045675 330 PKTKRNFI 337 (382)
Q Consensus 330 ~~t~~~~~ 337 (382)
+++++...
T Consensus 280 ~~~~~~~~ 287 (342)
T 1yfq_A 280 LQTRKKIK 287 (342)
T ss_dssp TTTTEEEE
T ss_pred CccHhHhh
Confidence 99887543
No 99
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=85.89 E-value=26 Score=33.80 Aligned_cols=194 Identities=12% Similarity=-0.007 Sum_probs=100.0
Q ss_pred CceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
++++++.... ...+.|+|+.|++... +|.... ..++.++|..+ |-.+. . ....+.+|+.
T Consensus 166 ~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~-----------p~~v~~SpDGr-~lyv~--~----~dg~V~viD~ 225 (567)
T 1qks_A 166 ENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYA-----------VHISRLSASGR-YLFVI--G----RDGKVNMIDL 225 (567)
T ss_dssp GGEEEEEETT--TTEEEEEETTTCCEEEEEECSSC-----------EEEEEECTTSC-EEEEE--E----TTSEEEEEET
T ss_pred CceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCC-----------ccceEECCCCC-EEEEE--c----CCCeEEEEEC
Confidence 4566555543 5689999999988653 543221 22567777543 43332 2 2347999998
Q ss_pred CCCCeeeecCC-CCeeEEeCCcceEE----ECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCC-CC------C
Q 045675 187 STGKWKEVAAG-TGSCVIYGGQDAVA----VKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPEL-PT------D 253 (382)
Q Consensus 187 ~t~~W~~~~~~-~~~~~~~~~~~~v~----~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~-~~------~ 253 (382)
.+.+-+.+... ....+. +-++. -+|+.-++.... ...+.++|..+.+- ..++.... .. .
T Consensus 226 ~~~t~~~v~~i~~G~~P~---~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~ 297 (567)
T 1qks_A 226 WMKEPTTVAEIKIGSEAR---SIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE 297 (567)
T ss_dssp TSSSCCEEEEEECCSEEE---EEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESC
T ss_pred CCCCCcEeEEEecCCCCc---eeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCC
Confidence 52222222222 111111 12222 267655555443 24788999877544 33443211 00 0
Q ss_pred -CeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEE-EEEc--CeEEEE
Q 045675 254 -CYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKII-MKSV--DQFFLF 328 (382)
Q Consensus 254 -~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~-l~~~--~~~~~y 328 (382)
....+... ++...++... ....+.+.-..+. ...++..|+........++..+|+.+ +... +++.++
T Consensus 298 ~rva~i~~s~~~~~~vv~~~-------~~g~v~~vd~~~~-~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 298 PRVAAILASHYRPEFIVNVK-------ETGKILLVDYTDL-NNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp CCEEEEEECSSSSEEEEEET-------TTTEEEEEETTCS-SEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CceEEEEEcCCCCEEEEEec-------CCCeEEEEecCCC-ccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 11122222 3344444443 2343333333232 24555666655555566777788744 4443 389999
Q ss_pred eCCCCcEEE
Q 045675 329 NPKTKRNFI 337 (382)
Q Consensus 329 d~~t~~~~~ 337 (382)
|.++++...
T Consensus 370 D~~t~kl~~ 378 (567)
T 1qks_A 370 DTKEGKLVA 378 (567)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 999998654
No 100
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=85.86 E-value=18 Score=31.90 Aligned_cols=179 Identities=13% Similarity=0.156 Sum_probs=85.9
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
+..+.|||..++++.........+.. ....+.+.|.. .+-+.+- .+..+.+++..++.++.......
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h~~------~v~~~~~sp~g-~~l~s~s------~D~~v~iw~~~~~~~~~~~~~~~ 103 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGHQR------TVRKVAWSPCG-NYLASAS------FDATTCIWKKNQDDFECVTTLEG 103 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSCSS------CEEEEEECTTS-SEEEEEE------TTSCEEEEEECCC-EEEEEEECC
T ss_pred CCeEEEEEcCCCcceeeeeeccccCC------cEEEEEECCCC-CEEEEEE------CCCcEEEEEccCCCeEEEEEccC
Confidence 45788998887765422111111111 23356677743 3333222 23467888877776544332211
Q ss_pred e-eEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCc-eeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCC
Q 045675 200 S-CVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLE-LFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLG 274 (382)
Q Consensus 200 ~-~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~-~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~ 274 (382)
+ ... .++.+ +|.+...+..+ ..|..+|+.++ ....+..-.........+.. -+|.+.+....
T Consensus 104 h~~~v----~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--- 170 (345)
T 3fm0_A 104 HENEV----KSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--- 170 (345)
T ss_dssp CSSCE----EEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET---
T ss_pred CCCCc----eEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC---
Confidence 0 011 11222 45544444433 46777887654 22222111111111222332 25665554444
Q ss_pred ccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeC
Q 045675 275 FRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNP 330 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~ 330 (382)
...+.+|.+... .|.....+.- ...+.-+.+..+|..++.. .+ .+.+||.
T Consensus 171 -----d~~i~~w~~~~~-~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 171 -----DDTVKLYREEED-DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp -----TSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred -----CCcEEEEEecCC-CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 668999988765 4766655532 2224445666677654443 34 6767764
No 101
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=85.79 E-value=18 Score=31.87 Aligned_cols=208 Identities=12% Similarity=-0.033 Sum_probs=103.5
Q ss_pred CceEEEeeCCCCceeEEEEccccccee--ccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFK--GLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
+|.|...+.. ...+..+++.++... .+.. ... ...|+.+|+..+...+.- .....+++++
T Consensus 46 ~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~~~-~l~---------~p~glavd~~~g~ly~~d------~~~~~I~~~~ 107 (318)
T 3sov_A 46 HGLIYWSDVS--EEAIKRTEFNKTESVQNVVVS-GLL---------SPDGLACDWLGEKLYWTD------SETNRIEVSN 107 (318)
T ss_dssp GTEEEEEETT--TTEEEEEETTSSSCCCEEEEE-CCS---------CCCEEEEETTTTEEEEEE------TTTTEEEEEE
T ss_pred CCEEEEEECC--CCcEEEEEccCCCceEEEEcC-CCC---------CccEEEEEcCCCeEEEEE------CCCCEEEEEE
Confidence 5666655543 345666776655311 1111 000 122677776554433221 1234778888
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY- 261 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~- 261 (382)
..+..=+.+....... ..++.+ +|.|||..... ...|.++|+....-+.+-. ... ...-.|+..
T Consensus 108 ~dG~~~~~l~~~~~~~-----P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~-~~l-~~Pnglavd~ 175 (318)
T 3sov_A 108 LDGSLRKVLFWQELDQ-----PRAIALDPSSGFMYWTDWGE-----VPKIERAGMDGSSRFIIIN-SEI-YWPNGLTLDY 175 (318)
T ss_dssp TTSCSCEEEECSSCSS-----EEEEEEEGGGTEEEEEECSS-----SCEEEEEETTSCSCEEEEC-SSC-SCEEEEEEET
T ss_pred CCCCcEEEEEeCCCCC-----ccEEEEeCCCCEEEEEecCC-----CCEEEEEEcCCCCeEEEEE-CCC-CCccEEEEec
Confidence 7654322221110011 123333 58999987432 2489999997644333311 111 123445554
Q ss_pred -CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCC-cEEEEEcC--eEEEEeCCCCcE-E
Q 045675 262 -DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDS-KIIMKSVD--QFFLFNPKTKRN-F 336 (382)
Q Consensus 262 -~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g-~l~l~~~~--~~~~yd~~t~~~-~ 336 (382)
+|+||++... ...+....++.. . .++. +. ..+..|.++.-++ .+|..... ++..+|+.+++. +
T Consensus 176 ~~~~lY~aD~~--------~~~I~~~d~dG~-~-~~~~-~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 176 EEQKLYWADAK--------LNFIHKSNLDGT-N-RQAV-VK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp TTTEEEEEETT--------TTEEEEEETTSC-S-CEEE-EC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred cCCEEEEEECC--------CCEEEEEcCCCC-c-eEEE-ec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceE
Confidence 7889988765 555555555433 1 2111 11 2346676665334 46666543 899999976653 4
Q ss_pred EEeeeCCCCCeEEEEEEeeceee
Q 045675 337 ILPIDSGMGYSYKVFTYVDSIVA 359 (382)
Q Consensus 337 ~v~~~~~~~~~~~~~~y~~SLv~ 359 (382)
.+...... -..+.+|.++..|
T Consensus 244 ~i~~~~~~--P~~i~v~~~~~q~ 264 (318)
T 3sov_A 244 EIHSDIFS--PMDIHAFSQQRQP 264 (318)
T ss_dssp EEECCCSS--CCCEEEECGGGSC
T ss_pred EEeCCCCC--CcEEEEecccccc
Confidence 44332111 1334566665543
No 102
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.58 E-value=33 Score=34.67 Aligned_cols=108 Identities=8% Similarity=-0.001 Sum_probs=62.7
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE--eCCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS--YDQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
+|.|||..... ..|.++|+....-..+... .. .....|++ .+|.||+.... . ...|.+-.++.
T Consensus 482 ~~~LY~tD~~~------~~I~v~~ldG~~~~~l~~~-~l-~~P~gIaVDp~~g~LYwtD~g--~-----~~~I~~~~~dG 546 (791)
T 3m0c_C 482 HSNIYWTDSVL------GTVSVADTKGVKRKTLFRE-NG-SKPRAIVVDPVHGFMYWTDWG--T-----PAKIKKGGLNG 546 (791)
T ss_dssp TTEEEEEETTT------TEEEEEETTSSSEEEEEEC-TT-CCEEEEEEETTTTEEEEEECS--S-----SCEEEEEETTS
T ss_pred CCcEEEEecCC------CeEEEEeCCCCeEEEEEeC-CC-CCcceEEEecCCCCEEEecCC--C-----CCeEEEEecCC
Confidence 47999987654 5899999987655444211 11 12345555 36889887754 1 24444444433
Q ss_pred CCCeeEEEEeecCCcccceEEe---eCCcEEEEEcC--eEEEEeCCCCcEEEEe
Q 045675 291 GKGWTRTFNTAFERIAWPVGSF---RDSKIIMKSVD--QFFLFNPKTKRNFILP 339 (382)
Q Consensus 291 ~~~W~~~~~i~~~~~~~~~~~~---~~g~l~l~~~~--~~~~yd~~t~~~~~v~ 339 (382)
. ....+-...+..|.++. .++.||+.... +|..+|+.....+.+.
T Consensus 547 ~----~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 547 V----DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp C----CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred C----ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 2 12222223445666554 24557777654 8999999877666553
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=85.22 E-value=17 Score=30.95 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=54.0
Q ss_pred cEEEEEECCCceee-EeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC-cc
Q 045675 230 KFVVSYDMNLELFW-RTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER-IA 306 (382)
Q Consensus 230 ~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-~~ 306 (382)
..|..+|+.+.+.. .+..... ....+... +|. ++... ....+.+|.+... .....+.... ..
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~--l~~~~-------~dg~v~iwd~~~~---~~~~~~~~~~~~i 269 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHES---FVYCIKLLPNGD--IVSCG-------EDRTVRIWSKENG---SLKQVITLPAISI 269 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSC--EEEEE-------TTSEEEEECTTTC---CEEEEEECSSSCE
T ss_pred CeEEEEECCchhhhhhhhcCCc---eEEEEEEecCCC--EEEEe-------cCCEEEEEECCCC---ceeEEEeccCceE
Confidence 48999999875543 2332221 23334333 554 33333 2678999988776 2333333222 24
Q ss_pred cceEEeeCCcEEEEEcC-eEEEEeCCCCcEEE
Q 045675 307 WPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 307 ~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
.-+.+..++.++....+ .+.+||++++++..
T Consensus 270 ~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 270 WSVDCMSNGDIIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EEEEECTTSCEEEEETTSCEEEEESCGGGCCC
T ss_pred EEEEEccCCCEEEEeCCCcEEEEeCCCCceee
Confidence 44556667776666655 89999999887544
No 104
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=84.49 E-value=28 Score=33.18 Aligned_cols=185 Identities=11% Similarity=0.028 Sum_probs=95.5
Q ss_pred ceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC
Q 045675 109 GLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST 188 (382)
Q Consensus 109 Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t 188 (382)
++++.... .....+||..|++...|...+. ..+.++|.+ ++-+..... ......+.+++..+
T Consensus 123 ~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~------------~~~~~spDG-~~la~~~~~--~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 123 AVVFTGAT---EDRVALYALDGGGLRELARLPG------------FGFVSDIRG-DLIAGLGFF--GGGRVSLFTSNLSS 184 (582)
T ss_dssp CEEEEEEC---SSCEEEEEEETTEEEEEEEESS------------CEEEEEEET-TEEEEEEEE--ETTEEEEEEEETTT
T ss_pred eEEEEecC---CCCceEEEccCCcEEEeecCCC------------ceEEECCCC-CEEEEEEEc--CCCCeEEEEEcCCC
Confidence 45555444 2345589999988776653222 134455543 333322222 11223588888888
Q ss_pred CCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeee------E-EEe
Q 045675 189 GKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVK------A-LSY 261 (382)
Q Consensus 189 ~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~------l-~~~ 261 (382)
+.++.+....... . .....-+|+..+..... ....|..+|+.+.+...+.-.... ..... . ..-
T Consensus 185 g~~~~l~~~~~~~-~---~~~~SpDG~~l~~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 185 GGLRVFDSGEGSF-S---SASISPGMKVTAGLETA----REARLVTVDPRDGSVEDLELPSKD-FSSYRPTAITWLGYLP 255 (582)
T ss_dssp CCCEEECCSSCEE-E---EEEECTTSCEEEEEECS----SCEEEEEECTTTCCEEECCCSCSH-HHHHCCSEEEEEEECT
T ss_pred CCceEeecCCCcc-c---cceECCCCCEEEEccCC----CeeEEEEEcCCCCcEEEccCCCcC-hhhhhhccccceeEcC
Confidence 8888764432211 1 13333477655543333 124799999998877722211110 00010 0 234
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEc-C----eEEEEeCCCCcEE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSV-D----QFFLFNPKTKRNF 336 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-~----~~~~yd~~t~~~~ 336 (382)
||++++.... ...+.||.+ . .... .+ ......+.+. +|.+++... + .++.+|.++ +.+
T Consensus 256 dg~~~~~~~~--------~g~~~l~~~--g-~~~~---~~-~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~ 318 (582)
T 3o4h_A 256 DGRLAVVARR--------EGRSAVFID--G-ERVE---AP-QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLL 318 (582)
T ss_dssp TSCEEEEEEE--------TTEEEEEET--T-EEEC---CC-SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEE
T ss_pred CCcEEEEEEc--------CCcEEEEEE--C-Ceec---cC-CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceE
Confidence 7766665554 568999998 2 1211 11 1223334555 677554432 2 788888875 443
Q ss_pred E
Q 045675 337 I 337 (382)
Q Consensus 337 ~ 337 (382)
.
T Consensus 319 ~ 319 (582)
T 3o4h_A 319 E 319 (582)
T ss_dssp C
T ss_pred E
Confidence 3
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=84.43 E-value=18 Score=30.82 Aligned_cols=199 Identities=7% Similarity=-0.075 Sum_probs=94.9
Q ss_pred eeeccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEE-ee--------
Q 045675 103 IVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIV-NF-------- 173 (382)
Q Consensus 103 ~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~-~~-------- 173 (382)
+.-+.+|.|++.... ...+.++||.+++...+......... . ....+.+|+.. .+.+.-.. ..
T Consensus 74 l~~~~dg~l~v~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~--~---~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 74 HCLNKQGHLIACSHG--LRRLERQREPGGEWESIADSFEGKKL--N---SPNDVCLAPDG-SLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp EEECTTCCEEEEETT--TTEEEEECSTTCCEEEEECEETTEEC--C---CCCCEEECTTS-CEEEEECSHHHHCGGGSSC
T ss_pred eeECCCCcEEEEecC--CCeEEEEcCCCCcEEEEeeccCCCCC--C---CCCCEEECCCC-CEEEECCcccccccccccc
Confidence 333457776665542 35799999999987766432111000 0 11245566644 32221100 00
Q ss_pred --cCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECC-Ccee---eEe
Q 045675 174 --QARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMN-LELF---WRT 245 (382)
Q Consensus 174 --~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~-~~~~---~~i 245 (382)
.......+..|+.. +.-+....... . ..++.+ +|.++ +.... ...|..||+. +.++ ..+
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~~~~~-~-----~~gi~~s~dg~~l-v~~~~-----~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-GTLSAPIRDRV-K-----PNGLAFLPSGNLL-VSDTG-----DNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp CCCCSSSCEEEEECTT-SCEEEEECCCS-S-----EEEEEECTTSCEE-EEETT-----TTEEEEEEECSSSCEEEEEEE
T ss_pred ccccCCCcEEEEECCC-CCEEEeecCCC-C-----CccEEECCCCCEE-EEeCC-----CCeEEEEEECCCCcCcCCCeE
Confidence 00011245555554 44333322110 0 123333 67777 44433 2489999986 4454 111
Q ss_pred CCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEE-eeCCc-EEEEEc
Q 045675 246 AMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGS-FRDSK-IIMKSV 322 (382)
Q Consensus 246 ~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~-~~~g~-l~l~~~ 322 (382)
. .. .......+.. .+|.|++.. . . .+.+| +.. + ..+..+....-...+.+ ..++. |++...
T Consensus 213 ~-~~-~~~~p~~i~~d~~G~l~v~~-~--~-------~v~~~--~~~-g-~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 213 F-TV-EPGKTDGLRVDAGGLIWASA-G--D-------GVHVL--TPD-G-DELGRVLTPQTTSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp E-CC-SSSCCCSEEEBTTSCEEEEE-T--T-------EEEEE--CTT-S-CEEEEEECSSCCCEEEEESTTSCEEEEEET
T ss_pred e-eC-CCCCCCeEEECCCCCEEEEc-C--C-------eEEEE--CCC-C-CEEEEEECCCCceeEEEECCCCCEEEEEcC
Confidence 1 11 1111223443 478888766 3 2 34444 433 3 12233332221222334 23444 777777
Q ss_pred CeEEEEeCCCCcEEEE
Q 045675 323 DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 323 ~~~~~yd~~t~~~~~v 338 (382)
+.++.++++++++++-
T Consensus 277 ~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 277 TEFWSIETNVRGLEHH 292 (296)
T ss_dssp TEEEEEECSCCBCCC-
T ss_pred CeEEEEEccccccccc
Confidence 7999999999998764
No 106
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=84.32 E-value=20 Score=31.19 Aligned_cols=189 Identities=11% Similarity=0.035 Sum_probs=93.3
Q ss_pred ceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC
Q 045675 109 GLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS 187 (382)
Q Consensus 109 Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~ 187 (382)
|-+++.... ...+.|||..+++... +..... ....+.+.|..+.+-+.+. .+..+.+|+..
T Consensus 85 ~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~----------~i~~~~~~~~~~~~l~s~~------~dg~i~iwd~~ 146 (366)
T 3k26_A 85 HPLLAVAGS--RGIIRIINPITMQCIKHYVGHGN----------AINELKFHPRDPNLLLSVS------KDHALRLWNIQ 146 (366)
T ss_dssp CEEEEEEET--TCEEEEECTTTCCEEEEEESCCS----------CEEEEEECSSCTTEEEEEE------TTSCEEEEETT
T ss_pred CCEEEEecC--CCEEEEEEchhceEeeeecCCCC----------cEEEEEECCCCCCEEEEEe------CCCeEEEEEee
Confidence 444443332 5589999998877543 221111 2346677775455444332 23479999988
Q ss_pred CCCeeeec-CCC-CeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeE-eC----------------
Q 045675 188 TGKWKEVA-AGT-GSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TA---------------- 246 (382)
Q Consensus 188 t~~W~~~~-~~~-~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~---------------- 246 (382)
++.-...- ... ..... ..+. -+|.....++.+ ..|..+|+.+.+... +.
T Consensus 147 ~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEV----LSADYDLLGEKIMSCGMD------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFIS 216 (366)
T ss_dssp TTEEEEEECSTTSCSSCE----EEEEECTTSSEEEEEETT------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCC
T ss_pred cCeEEEEecccccccCce----eEEEECCCCCEEEEecCC------CCEEEEECCCCccccccceeEEecCCCCcccccc
Confidence 76433221 110 10111 1121 135444433332 478888988654321 00
Q ss_pred ----CCCC-----CCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-----------eeEEEEeecC-Cc
Q 045675 247 ----MPEL-----PTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-----------WTRTFNTAFE-RI 305 (382)
Q Consensus 247 ----~P~~-----~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-----------W~~~~~i~~~-~~ 305 (382)
.|.. .......+... |.+.+.... ...+.+|.+..... ...+..+... .-
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~--------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (366)
T 3k26_A 217 QKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSC--------ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD 287 (366)
T ss_dssp EEECCCSEEECSSCSSCCCEEEEE-TTEEEEECS--------SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC
T ss_pred eeeccCccccccCCcceEEEEEEc-CCEEEEEec--------CCEEEEEeCCCccccccccccCCcchheeccccccCCc
Confidence 0000 00111222222 555444443 67899999875421 2333333221 11
Q ss_pred ccceEEeeC--CcEEEEEc-C-eEEEEeCCCCc
Q 045675 306 AWPVGSFRD--SKIIMKSV-D-QFFLFNPKTKR 334 (382)
Q Consensus 306 ~~~~~~~~~--g~l~l~~~-~-~~~~yd~~t~~ 334 (382)
...+.+..+ +.+++... + .+.+||+++++
T Consensus 288 v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 288 IWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp SSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 333445556 77655554 3 89999999875
No 107
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.29 E-value=17 Score=31.55 Aligned_cols=105 Identities=7% Similarity=0.037 Sum_probs=59.3
Q ss_pred ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 212 VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 212 ~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
-+|.+||..... ..|..+|+.++.-..+..+. ....++. -+|+|+++... .....|+.++.
T Consensus 41 ~~g~lyv~d~~~------~~I~~~d~~g~~~~~~~~~~----~p~gia~~~dG~l~vad~~--------~~~~~v~~~d~ 102 (306)
T 2p4o_A 41 PDGTIFVTNHEV------GEIVSITPDGNQQIHATVEG----KVSGLAFTSNGDLVATGWN--------ADSIPVVSLVK 102 (306)
T ss_dssp TTSCEEEEETTT------TEEEEECTTCCEEEEEECSS----EEEEEEECTTSCEEEEEEC--------TTSCEEEEEEC
T ss_pred CCCCEEEEeCCC------CeEEEECCCCceEEEEeCCC----CceeEEEcCCCcEEEEecc--------CCcceEEEEcC
Confidence 378999987543 48999999876544445442 2334444 37888776654 22345666653
Q ss_pred CCC-eeEEEEeecCCcccceEEeeCCcEEEEEc-C-eEEEEeCCCCc
Q 045675 291 GKG-WTRTFNTAFERIAWPVGSFRDSKIIMKSV-D-QFFLFNPKTKR 334 (382)
Q Consensus 291 ~~~-W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-~-~~~~yd~~t~~ 334 (382)
.++ ...+..++-.....-.+...++.+++... . .++.+|+.+++
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 324 54444432111122223344455666653 2 89999998753
No 108
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=84.09 E-value=20 Score=31.07 Aligned_cols=184 Identities=10% Similarity=0.047 Sum_probs=89.7
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCC--CCeEEEEEEeecCCCCCEEEEEECCCCC--eeeec
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDT--NDYVLVRIVNFQARYDAIAEVYSTSTGK--WKEVA 195 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~--~~ykvv~~~~~~~~~~~~~~vyss~t~~--W~~~~ 195 (382)
...+.|||..+++...+-.... . . ....+.+.+.. +.+-+.+. .+..+.+|+..++. -....
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~--~----~--~v~~~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~ 108 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEK--A----K--PIKCGTFGATSLQQRYLATGD------FGGNLHIWNLEAPEMPVYSVK 108 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEE--S----S--CEEEEECTTCCTTTCCEEEEE------TTSCEEEECTTSCSSCSEEEC
T ss_pred CcEEEEEeCCCCcccceeeecc--c----C--cEEEEEEcCCCCCCceEEEec------CCCeEEEEeCCCCCccEEEEE
Confidence 3578899988877543322111 0 0 23456676664 44444432 23478888887664 11211
Q ss_pred CCCCeeEEeCCcc--eEEECceEEEEeecccccccccEEEEEECCCce--eeEeCCCCCCCC-CeeeEE-----EeCCeE
Q 045675 196 AGTGSCVIYGGQD--AVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL--FWRTAMPELPTD-CYVKAL-----SYDQSL 265 (382)
Q Consensus 196 ~~~~~~~~~~~~~--~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~--~~~i~~P~~~~~-~~~~l~-----~~~g~L 265 (382)
........+.... +..-+|.....+..+ ..|..+|+.+.. ...+........ ....+. ..+|.+
T Consensus 109 ~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 182 (357)
T 3i2n_A 109 GHKEIINAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV 182 (357)
T ss_dssp CCSSCEEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE
T ss_pred ecccceEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE
Confidence 1111000000000 122345544444433 478889998764 444443332111 122222 146666
Q ss_pred EEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEee---CCcEE-EEEcC-eEEEEeCCCCc
Q 045675 266 ALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFR---DSKII-MKSVD-QFFLFNPKTKR 334 (382)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~---~g~l~-l~~~~-~~~~yd~~t~~ 334 (382)
.++... ...+.+|.++.. ..........-...+.+.. ++..+ ....+ .+..||+++++
T Consensus 183 l~~~~~--------d~~i~i~d~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 183 VCAGYD--------NGDIKLFDLRNM---ALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEET--------TSEEEEEETTTT---EEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEEcc--------CCeEEEEECccC---ceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 666554 678999988776 2222222223344455554 55544 44434 78888876643
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=84.05 E-value=21 Score=31.11 Aligned_cols=186 Identities=12% Similarity=0.041 Sum_probs=88.3
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.|||..+++... +..... ....+.+.+.. .+-+.+. .+..+.+|+..++.-...-...
T Consensus 53 dg~i~vwd~~~~~~~~~~~~h~~----------~v~~~~~~~~~-~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~ 115 (369)
T 3zwl_B 53 DSSASVWYSLNGERLGTLDGHTG----------TIWSIDVDCFT-KYCVTGS------ADYSIKLWDVSNGQCVATWKSP 115 (369)
T ss_dssp SSCEEEEETTTCCEEEEECCCSS----------CEEEEEECTTS-SEEEEEE------TTTEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEeCCCchhhhhhhhcCC----------cEEEEEEcCCC-CEEEEEe------CCCeEEEEECCCCcEEEEeecC
Confidence 4578999988876543 322111 23356666643 3333221 2357999998876543221111
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCcee----e--------EeCCCCCCCCCeeeEEE-eCCeE
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF----W--------RTAMPELPTDCYVKALS-YDQSL 265 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~----~--------~i~~P~~~~~~~~~l~~-~~g~L 265 (382)
..... -...-+|.....+.... ......|..+|+.+..- . .+...... .....+.. -+|.+
T Consensus 116 ~~v~~----~~~~~~~~~l~~~~~~~-~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 116 VPVKR----VEFSPCGNYFLAILDNV-MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL-DAATVAGWSTKGKY 189 (369)
T ss_dssp SCEEE----EEECTTSSEEEEEECCB-TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC-CCEEEEEECGGGCE
T ss_pred CCeEE----EEEccCCCEEEEecCCc-cCCCCEEEEEEecCCccceeecccccceeeeccCCcCc-cceeEEEEcCCCCE
Confidence 10000 11112344444333210 00113666777654321 1 11110000 01122222 25555
Q ss_pred EEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEEEE
Q 045675 266 ALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~~v 338 (382)
.++... ...+.+|.+... ...+..+.. ..-...+.+..++..++.. .+ .+.+||+++++....
T Consensus 190 l~~~~~--------dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 190 IIAGHK--------DGKISKYDVSNN--YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp EEEEET--------TSEEEEEETTTT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEcC--------CCEEEEEECCCC--cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 555443 678999998774 233444432 2224445555677754444 44 899999998775543
No 110
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.99 E-value=25 Score=32.06 Aligned_cols=55 Identities=7% Similarity=0.039 Sum_probs=29.0
Q ss_pred CCeEEEEEECCCCCeeEEEEee---cCCcccceEEeeCCcEEEEEcC-eEEEEeCCCCcEEE
Q 045675 280 SNRFELWVMNEGKGWTRTFNTA---FERIAWPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~---~~~~~~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
...+.||..... ..+..+. ...+.....+..+|.++....+ .+.++|+++++.++
T Consensus 377 ~~~i~iwd~~~g---~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNSG---KMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSSC---CEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEECCCC---cEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 356889976655 2233331 1122223345667886655545 89999999987654
No 111
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.91 E-value=24 Score=31.69 Aligned_cols=184 Identities=9% Similarity=-0.011 Sum_probs=94.4
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCe-eeecCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKW-KEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W-~~~~~~~ 198 (382)
...+.|||..+++....-..... ....+.+.|... +-+.+ . .+..+.+|+..++.= +......
T Consensus 118 dg~i~iwd~~~~~~~~~~~~h~~---------~v~~~~~~~~~~-~l~s~-s-----~d~~i~iwd~~~~~~~~~~~~h~ 181 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREIDQAHVS---------EITKLKFFPSGE-ALISS-S-----QDMQLKIWSVKDGSNPRTLIGHR 181 (420)
T ss_dssp TSCEEEECTTSCEEEEETTSSSS---------CEEEEEECTTSS-EEEEE-E-----TTSEEEEEETTTCCCCEEEECCS
T ss_pred CCCEEEEeCCCcceeeecccccC---------ccEEEEECCCCC-EEEEE-e-----CCCeEEEEeCCCCcCceEEcCCC
Confidence 45899999988876654322111 234677777533 33222 1 335899999886531 1111110
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-----------------
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS----------------- 260 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~----------------- 260 (382)
.. .. .-...-+|.....+..+ ..|..+|+.+.+... +..+.........+..
T Consensus 182 ~~-v~---~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 182 AT-VT---DIAIIDRGRNVLSASLD------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp SC-EE---EEEEETTTTEEEEEETT------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred Cc-EE---EEEEcCCCCEEEEEcCC------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 10 00 01112245544444433 368888988765433 3332211111111111
Q ss_pred -----eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec--CCcccceEEeeCCc-EEEEE-cC-eEEEEeC
Q 045675 261 -----YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF--ERIAWPVGSFRDSK-IIMKS-VD-QFFLFNP 330 (382)
Q Consensus 261 -----~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~--~~~~~~~~~~~~g~-l~l~~-~~-~~~~yd~ 330 (382)
-+|.+.++... ...+.+|.+... .....+.. ......+.+..++. +++.. .+ .+.+||+
T Consensus 252 ~~~~s~~~~~l~~~~~--------dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHV--------SGVITVHNVFSK---EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp TTCSSCTTEEEEEEET--------TSCEEEEETTTC---CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred ceEEcCCCCEEEEEcC--------CCeEEEEECCCC---ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 25666655554 667999998765 23333322 22244556666676 55444 44 8999999
Q ss_pred CCCc--EEEEee
Q 045675 331 KTKR--NFILPI 340 (382)
Q Consensus 331 ~t~~--~~~v~~ 340 (382)
++++ ...+..
T Consensus 321 ~~~~~~~~~~~~ 332 (420)
T 3vl1_A 321 RSPECPVGEFLI 332 (420)
T ss_dssp TCTTSCSEEEEE
T ss_pred CCCcCchhhhhc
Confidence 9864 344443
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=83.26 E-value=24 Score=31.26 Aligned_cols=106 Identities=6% Similarity=-0.112 Sum_probs=53.3
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCC----CCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEE
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPT----DCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVM 288 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~----~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l 288 (382)
+|.....+..+ ..|..+|+.+.+-.......... ..........+...++... ...+.+|.+
T Consensus 256 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~v~d~ 321 (408)
T 4a11_B 256 DGLHLLTVGTD------NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY--------GSTIAVYTV 321 (408)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE--------TTEEEEEET
T ss_pred CCCEEEEecCC------CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec--------CCEEEEEEC
Confidence 45544444433 47889999876543321111100 0111122222233333333 468888888
Q ss_pred CCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcE
Q 045675 289 NEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRN 335 (382)
Q Consensus 289 ~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~ 335 (382)
... ..+..+.. ...+..+.+..++.+++.. .+ .+.+||+++.+.
T Consensus 322 ~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 322 YSG---EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp TTC---CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred cCC---cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 765 33444421 2224456666777755544 34 899999988764
No 113
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=83.04 E-value=22 Score=30.65 Aligned_cols=202 Identities=13% Similarity=0.068 Sum_probs=99.0
Q ss_pred EEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC
Q 045675 111 LCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK 190 (382)
Q Consensus 111 l~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~ 190 (382)
|+..+.. ...++.++| +++...+..... ...++.+|+... ++.... ....+.+|+.. ++
T Consensus 59 l~~~d~~--~~~i~~~~~-~g~~~~~~~~~~----------~~~gl~~d~dG~---l~v~~~----~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 59 LVWSDLV--GRRVLGWRE-DGTVDVLLDATA----------FTNGNAVDAQQR---LVHCEH----GRRAITRSDAD-GQ 117 (305)
T ss_dssp EEEEETT--TTEEEEEET-TSCEEEEEESCS----------CEEEEEECTTSC---EEEEET----TTTEEEEECTT-SC
T ss_pred EEEEECC--CCEEEEEeC-CCCEEEEeCCCC----------ccceeeECCCCC---EEEEEC----CCCEEEEECCC-CC
Confidence 4444432 457888888 565444332221 134677777543 222111 12356677765 55
Q ss_pred eeeecCC-CCeeEEeCCcc-eEEECceEEEEeecccc-----------cccccEEEEEECCCceeeEeCCCCCCCCCeee
Q 045675 191 WKEVAAG-TGSCVIYGGQD-AVAVKGVLHWIANGIGV-----------LVNEKFVVSYDMNLELFWRTAMPELPTDCYVK 257 (382)
Q Consensus 191 W~~~~~~-~~~~~~~~~~~-~v~~~G~lywl~~~~~~-----------~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~ 257 (382)
.+..... ...... ..+. .+.-+|.+|+....... ......|..+|+.+.++..+. ... ..-.
T Consensus 118 ~~~~~~~~~~~~~~-~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~---~p~g 192 (305)
T 3dr2_A 118 AHLLVGRYAGKRLN-SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD---HPNG 192 (305)
T ss_dssp EEEEECEETTEECS-CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES---SEEE
T ss_pred EEEEEeccCCCccC-CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC---CCcc
Confidence 5443322 111110 0112 22236887764210000 001258999999888777654 111 1223
Q ss_pred EEE-eCCe-EEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEe-ec-CCcccceEEeeCCcEEEEEcCeEEEEeCCCC
Q 045675 258 ALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNT-AF-ERIAWPVGSFRDSKIIMKSVDQFFLFNPKTK 333 (382)
Q Consensus 258 l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i-~~-~~~~~~~~~~~~g~l~l~~~~~~~~yd~~t~ 333 (382)
++. -+|+ |+++... .. ......+.+|.++.. +......+ .. .....-+.+..+|.|++...+.+.+||++.+
T Consensus 193 l~~spdg~~lyv~~~~--~~-~~~~~~i~~~~~~~~-~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g~ 268 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTP--EQ-GHGSVEITAFAWRDG-ALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDGQ 268 (305)
T ss_dssp EEECTTSSEEEEEECC--C----CCCEEEEEEEETT-EEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECTTSC
T ss_pred eEEcCCCCEEEEEecC--Cc-CCCCCEEEEEEecCC-CccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECCCCC
Confidence 333 3565 6665543 10 001245666666554 32211111 11 1123345666678888877679999999888
Q ss_pred cEEEEeeeC
Q 045675 334 RNFILPIDS 342 (382)
Q Consensus 334 ~~~~v~~~~ 342 (382)
....+....
T Consensus 269 ~~~~~~~~~ 277 (305)
T 3dr2_A 269 LLGHIPTPG 277 (305)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 777776543
No 114
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.02 E-value=28 Score=31.78 Aligned_cols=180 Identities=9% Similarity=-0.025 Sum_probs=88.7
Q ss_pred eEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC----CeeeecCC
Q 045675 122 AFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG----KWKEVAAG 197 (382)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~----~W~~~~~~ 197 (382)
.+...++.++++..+-+... ...++.+|+..+...+.-+ ....+..++..+. ....+...
T Consensus 93 ~I~~i~l~~~~~~~~~~~~~----------~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPNLR----------NVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp EEEEECTTSCSCEEEECSCS----------CEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECS
T ss_pred eeEEEccCCcceeEeccccC----------cceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeC
Confidence 55666666555444321111 2457888876654333221 2235666666542 12222111
Q ss_pred CCeeEEeCCcceEE-ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE--eCCeEEEEEecCCC
Q 045675 198 TGSCVIYGGQDAVA-VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS--YDQSLALAVYPGLG 274 (382)
Q Consensus 198 ~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~ 274 (382)
....+. .-++- .+|.|||..... ..|.++|+.......+.. ... .....+++ .+|.|++....
T Consensus 157 ~~~~p~---glavD~~~~~lY~~d~~~------~~I~~~~~~g~~~~~l~~-~~~-~~P~~iavdp~~g~ly~td~~--- 222 (400)
T 3p5b_L 157 DIQAPD---GLAVDWIHSNIYWTDSVL------GTVSVADTKGVKRKTLFR-ENG-SKPRAIVVDPVHGFMYWTDWG--- 222 (400)
T ss_dssp SCSCEE---EEEEETTTTEEEEEETTT------TEEEEECTTTCSEEEEEE-CSS-CCEEEEEEETTTTEEEEEECS---
T ss_pred CCCCcc---cEEEEecCCceEEEECCC------CeEEEEeCCCCceEEEEe-CCC-CCcceEEEecccCeEEEEeCC---
Confidence 001111 11222 378999987654 489999998765544421 111 12344555 36888877653
Q ss_pred ccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEE--e-eCCcEEEEEcC--eEEEEeCCCCcEEEEe
Q 045675 275 FRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGS--F-RDSKIIMKSVD--QFFLFNPKTKRNFILP 339 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~--~-~~g~l~l~~~~--~~~~yd~~t~~~~~v~ 339 (382)
....+....++.. -.+ .+-...+..|-++ . .++.||+.... .+..+|++....+.+.
T Consensus 223 ----~~~~I~~~~~dG~--~~~--~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 223 ----TPAKIKKGGLNGV--DIY--SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp ----SSCCEEEEETTSC--SCE--EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEE
T ss_pred ----CCCEEEEEeCCCC--ccE--EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEE
Confidence 1234444334332 111 1211334455444 3 24457777654 8999999876655553
No 115
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=82.80 E-value=26 Score=31.24 Aligned_cols=95 Identities=14% Similarity=0.062 Sum_probs=51.2
Q ss_pred cEEEEEECCCceeeEe-CCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee-cCCcc
Q 045675 230 KFVVSYDMNLELFWRT-AMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA-FERIA 306 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~-~~~~~ 306 (382)
..|..+|+.+.+.... ..... ....+... +|.+.++... ...+.+|.+... . .+..+. .....
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~-~--~~~~~~~~~~~i 292 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG---PISVLEFNDTNKLLLSASD--------DGTLRIWHGGNG-N--SQNCFYGHSQSI 292 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS---CEEEEEEETTTTEEEEEET--------TSCEEEECSSSB-S--CSEEECCCSSCE
T ss_pred CeEEEEEcCCCceeeeeccCCC---ceEEEEECCCCCEEEEEcC--------CCEEEEEECCCC-c--cceEecCCCccE
Confidence 4789999987644332 21111 22333333 5665555543 668899987764 2 122221 11223
Q ss_pred cceEEeeCCcEEEEEcC-eEEEEeCCCCcEEEE
Q 045675 307 WPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 307 ~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~v 338 (382)
.-+.+..++.++....+ .+.+||+++++....
T Consensus 293 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 293 VSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp EEEEEETTTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 44555556633344444 899999988765443
No 116
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.65 E-value=20 Score=29.90 Aligned_cols=199 Identities=11% Similarity=-0.041 Sum_probs=97.9
Q ss_pred ccCceEEEeeCCCCceeEEEEcccc-cceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPAT-NEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+-+|-.++... ...++++|..+ ++...+....... ....+.+.|.. .+-++ ... .......+.++
T Consensus 50 spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~spdg-~~l~~-~~~-~~~~~~~l~~~ 115 (297)
T 2ojh_A 50 SPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATI--------CNNDHGISPDG-ALYAI-SDK-VEFGKSAIYLL 115 (297)
T ss_dssp CTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCC--------BCSCCEECTTS-SEEEE-EEC-TTTSSCEEEEE
T ss_pred CCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccc--------cccceEECCCC-CEEEE-EEe-CCCCcceEEEE
Confidence 33554433333 34899999999 8777665433211 01134455543 22222 221 11233467777
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eC
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YD 262 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~ 262 (382)
+..++.-+.+..... .. .....-+|. +++....+ ....|..+|..+.....+..... ....+.. -+
T Consensus 116 ~~~~~~~~~~~~~~~--~~---~~~~spdg~~l~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~s~d 183 (297)
T 2ojh_A 116 PSTGGTPRLMTKNLP--SY---WHGWSPDGKSFTYCGIRD----QVFDIYSMDIDSGVETRLTHGEG---RNDGPDYSPD 183 (297)
T ss_dssp ETTCCCCEECCSSSS--EE---EEEECTTSSEEEEEEEET----TEEEEEEEETTTCCEEECCCSSS---CEEEEEECTT
T ss_pred ECCCCceEEeecCCC--cc---ceEECCCCCEEEEEECCC----CceEEEEEECCCCcceEcccCCC---ccccceECCC
Confidence 777665444433321 11 011222454 44344333 13467777787766655432221 1223332 36
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC-cccceEEeeCCc-EEEEEc------------CeEEEE
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER-IAWPVGSFRDSK-IIMKSV------------DQFFLF 328 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~g~-l~l~~~------------~~~~~y 328 (382)
|+..++... ....+.||.++...+ ....+.... ....+.+..+|+ |++... ..++.|
T Consensus 184 g~~l~~~~~-------~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 184 GRWIYFNSS-------RTGQMQIWRVRVDGS--SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp SSEEEEEEC-------TTSSCEEEEEETTSS--CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred CCEEEEEec-------CCCCccEEEECCCCC--CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 665444443 145788999874312 122221111 133345556776 444433 259999
Q ss_pred eCCCCcEEEEe
Q 045675 329 NPKTKRNFILP 339 (382)
Q Consensus 329 d~~t~~~~~v~ 339 (382)
|+++++.+.+.
T Consensus 255 d~~~~~~~~~~ 265 (297)
T 2ojh_A 255 DMDGGNVETLF 265 (297)
T ss_dssp ETTSCSCEEEE
T ss_pred ecCCCCceeee
Confidence 99998876653
No 117
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=82.23 E-value=43 Score=33.45 Aligned_cols=184 Identities=11% Similarity=-0.017 Sum_probs=97.2
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC-C
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT-G 199 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~-~ 199 (382)
..++.+||.|+++..++...... . ....+..|... - +.+.. . ..+..|+..++.|+...... .
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~----~---~v~~i~~d~~g--~--lwigt----~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNEL----L---DVRVFYEDKNK--K--IWIGT----H-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCC----C---CEEEEEECTTS--E--EEEEE----T-TEEEEEESSSSSCCEEECTTTS
T ss_pred CCEEEEcCCCCcEEEeccCCCCC----C---eEEEEEECCCC--C--EEEEE----C-CceEEEeCCCCeEEecccCccc
Confidence 46778888888877665431110 1 12234444322 1 11111 1 36888999888887654321 0
Q ss_pred eeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCC-CeeeEEE-eCCeEEEEEecCCCc
Q 045675 200 SCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTD-CYVKALS-YDQSLALAVYPGLGF 275 (382)
Q Consensus 200 ~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~-~~~~l~~-~~g~L~~~~~~~~~~ 275 (382)
.... ..-.++.. +|. .|++..+ ..+..||..++++..+..+..... ....+.+ .+|.|.+....
T Consensus 491 ~~~~-~~i~~i~~d~~g~-lWigt~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~---- 558 (781)
T 3v9f_A 491 QLLE-NFVRSIAQDSEGR-FWIGTFG------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE---- 558 (781)
T ss_dssp SCSC-SCEEEEEECTTCC-EEEEESS------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETT----
T ss_pred cccc-ceeEEEEEcCCCC-EEEEEcC------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECC----
Confidence 0000 00123333 355 5666653 268899999999988754433211 2334444 36777765543
Q ss_pred cCCCCCeEEE-EEECCCCC-eeEEEEe-ecCC-cccceEEeeCCcEEEEEcCeEEEEeCCCCcEEEEee
Q 045675 276 RSRLSNRFEL-WVMNEGKG-WTRTFNT-AFER-IAWPVGSFRDSKIIMKSVDQFFLFNPKTKRNFILPI 340 (382)
Q Consensus 276 ~~~~~~~~~i-W~l~~~~~-W~~~~~i-~~~~-~~~~~~~~~~g~l~l~~~~~~~~yd~~t~~~~~v~~ 340 (382)
-+ ..++...+ +.....- .+.. .+..+....+|.|++...+.+..||+++++++....
T Consensus 559 --------Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 559 --------GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDH 619 (781)
T ss_dssp --------EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEEEEECG
T ss_pred --------CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCceEEecc
Confidence 12 33333212 3221110 0111 133344445677999988899999999998887743
No 118
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=81.84 E-value=26 Score=30.64 Aligned_cols=180 Identities=12% Similarity=0.067 Sum_probs=89.7
Q ss_pred ceeEEEEcccccce---eccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecC
Q 045675 120 GMAFVLWNPATNEF---KGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAA 196 (382)
Q Consensus 120 ~~~~~V~NP~T~~~---~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~ 196 (382)
...+.|||..++++ ..+..... ....+.+.+. +.+-+.+. .+..+.+|+..++.+.....
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h~~----------~v~~~~~~~~-~~~l~~~~------~dg~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEHNG----------QVTGVDWAPD-SNRIVTCG------TDRNAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSS----------CEEEEEEETT-TTEEEEEE------TTSCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEeCCCCcEEeeeeecCCCC----------cccEEEEeCC-CCEEEEEc------CCCeEEEEECCCCeeeeeEE
Confidence 45889999988853 33332221 2335667774 34433322 23478889888887654432
Q ss_pred CC-CeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCce----eeEeCCCCCCCCCeeeEEEe-CCeEEEE
Q 045675 197 GT-GSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLEL----FWRTAMPELPTDCYVKALSY-DQSLALA 268 (382)
Q Consensus 197 ~~-~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~----~~~i~~P~~~~~~~~~l~~~-~g~L~~~ 268 (382)
.. ..... ..+. -+|.....+..+ ..|..+|+.+.. ...+..+... ....+... +|.+.+.
T Consensus 92 ~~~~~~~v----~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 92 ILRINRAA----RCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIKKPIRS--TVLSLDWHPNSVLLAA 159 (372)
T ss_dssp CCCCSSCE----EEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEECTTCCS--CEEEEEECTTSSEEEE
T ss_pred eecCCCce----eEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeeecccCC--CeeEEEEcCCCCEEEE
Confidence 21 11111 1121 245555544433 356666665543 2222222221 23333332 5665555
Q ss_pred EecCCCccCCCCCeEEEEEECCCC-------C-e-------eEEEEeec-CCcccceEEeeCCcEEE-EEcC-eEEEEeC
Q 045675 269 VYPGLGFRSRLSNRFELWVMNEGK-------G-W-------TRTFNTAF-ERIAWPVGSFRDSKIIM-KSVD-QFFLFNP 330 (382)
Q Consensus 269 ~~~~~~~~~~~~~~~~iW~l~~~~-------~-W-------~~~~~i~~-~~~~~~~~~~~~g~l~l-~~~~-~~~~yd~ 330 (382)
... ...+.+|.+.... . | ..+..+.. ......+.+..++..++ ...+ .+.+||+
T Consensus 160 ~~~--------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 160 GSC--------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp EET--------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred EcC--------CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 554 6788999864210 0 2 22333321 11234455556676444 4444 8999999
Q ss_pred CCCcEE
Q 045675 331 KTKRNF 336 (382)
Q Consensus 331 ~t~~~~ 336 (382)
++++..
T Consensus 232 ~~~~~~ 237 (372)
T 1k8k_C 232 DKKMAV 237 (372)
T ss_dssp GGTTEE
T ss_pred CCCcee
Confidence 877644
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=81.51 E-value=38 Score=32.32 Aligned_cols=110 Identities=8% Similarity=-0.042 Sum_probs=66.6
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeE-eCC---CCCCCCCeeeEEEeC-CeEEEEEecCCCccCCCCCeEEEEE
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAM---PELPTDCYVKALSYD-QSLALAVYPGLGFRSRLSNRFELWV 287 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~---P~~~~~~~~~l~~~~-g~L~~~~~~~~~~~~~~~~~~~iW~ 287 (382)
+|...+.+... ...|.++|..+.+... ++. |... ....+..-+ |.+++.... ....+.||-
T Consensus 334 dg~~l~va~~~-----~~~v~v~D~~tg~l~~~i~~g~~ph~g--~g~~~~~p~~g~~~~s~~~-------~d~~V~v~d 399 (543)
T 1nir_A 334 SHRYFMTAANN-----SNKVAVIDSKDRRLSALVDVGKTPHPG--RGANFVHPKYGPVWSTSHL-------GDGSISLIG 399 (543)
T ss_dssp TSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSBCCT--TCEEEEETTTEEEEEEEBS-------SSSEEEEEE
T ss_pred CCCEEEEEecC-----CCeEEEEECCCCeEEEeeccCCCCCCC--CCcccCCCCCccEEEeccC-------CCceEEEEE
Confidence 57654444433 2478889999876644 332 3221 122333334 666555443 267899999
Q ss_pred ECCCCC----eeEEEEeecCCc-ccceEEeeCCcEEEEEc---------CeEEEEeCCCCcEE
Q 045675 288 MNEGKG----WTRTFNTAFERI-AWPVGSFRDSKIIMKSV---------DQFFLFNPKTKRNF 336 (382)
Q Consensus 288 l~~~~~----W~~~~~i~~~~~-~~~~~~~~~g~l~l~~~---------~~~~~yd~~t~~~~ 336 (382)
.+.... |..+.+++...- ...+.++.+|..+.+.. +.+.+||.++.+..
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 986322 999999976432 33466677777444432 38999999988743
No 120
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=81.36 E-value=42 Score=32.73 Aligned_cols=188 Identities=14% Similarity=-0.010 Sum_probs=96.2
Q ss_pred eccCceEEEeeCCCCceeEEEEcccccce--eccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEE
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPATNEF--KGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAE 182 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 182 (382)
...+|.|+..+.. ...+..+++..... ..+.. ... .-.|+++|..++...+.- .....++
T Consensus 48 ~~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~~-~~~---------~P~GlAvD~~~~~ly~~d------~~~~~I~ 109 (619)
T 3s94_A 48 VFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVS-GLL---------SPDGLACDWLGEKLYWTD------SETNRIE 109 (619)
T ss_dssp ETTTTEEEEEETT--TTEEEEEEC-----CEEEECS-SCS---------CEEEEEEETTTTEEEEEE------TTTTEEE
T ss_pred EeCCCEEEEEECC--CCeEEEEEccCCCceEEEEeC-CCC---------CcCeEEEEecCCEEEEEe------CCCCEEE
Confidence 4457888887764 45677778765421 22222 111 234788888665433321 1335788
Q ss_pred EEECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE
Q 045675 183 VYSTSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL 259 (382)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~ 259 (382)
+++..+..=+.+.... . ....++.+ +|.|||..... ...|..+++....-..+-... . .....|+
T Consensus 110 v~~~dG~~~~~l~~~~--l---~~P~~Iavdp~~g~ly~tD~g~-----~~~I~r~~~dG~~~~~l~~~~-~-~~P~Gla 177 (619)
T 3s94_A 110 VSNLDGSLRKVLFWQE--L---DQPRAIALDPSSGFMYWTDWGE-----VPKIERAGMDGSSRFIIINSE-I-YWPNGLT 177 (619)
T ss_dssp EEETTSCSCEEEECSS--C---SCCCCEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEECSS-C-SSEEEEE
T ss_pred EEECCCCCEEEEEeCC--C---CCCceEEEecCCCeEEEeccCC-----CCEEEEEECCCCceEEEEeCC-C-CCCcEEE
Confidence 8887654322222110 0 11234444 68999987543 248999999765444432111 1 1334455
Q ss_pred Ee--CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEeeCCc-EEEEEcC--eEEEEeCCCC
Q 045675 260 SY--DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFRDSK-IIMKSVD--QFFLFNPKTK 333 (382)
Q Consensus 260 ~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t~ 333 (382)
.. +++||++... .. .||..+-. | -.+. +-...+..|.++.-.++ ||+.... .+...|..++
T Consensus 178 ld~~~~~LY~aD~~--------~~--~I~~~~~d-G~~~~~--~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 178 LDYEEQKLYWADAK--------LN--FIHKSNLD-GTNRQA--VVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EETTTTEEEEEETT--------TC--CEEEESSS-CCEEC-----------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred EEccCCEEEEEeCC--------CC--eEEEecCC-CCccEE--EEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence 54 7899998765 33 45666543 3 1111 11112345555543344 5555433 8999999887
Q ss_pred cE
Q 045675 334 RN 335 (382)
Q Consensus 334 ~~ 335 (382)
+.
T Consensus 245 ~~ 246 (619)
T 3s94_A 245 EG 246 (619)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 121
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=81.30 E-value=26 Score=30.39 Aligned_cols=62 Identities=11% Similarity=0.142 Sum_probs=37.3
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecC---CcccceEEeeCCcEEEEE-cC-eEEEEeCCC
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFE---RIAWPVGSFRDSKIIMKS-VD-QFFLFNPKT 332 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~---~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t 332 (382)
|++.++... ...+.+|.++.... ......+... ....-+.+..++..++.. .+ .+.+||+.+
T Consensus 299 ~~~l~~~~~--------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ--------VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT--------TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEec--------CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 666655554 67899999987632 3344455432 224455666677755444 44 899999864
No 122
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=81.13 E-value=31 Score=31.08 Aligned_cols=55 Identities=4% Similarity=-0.089 Sum_probs=39.3
Q ss_pred EEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEc---CeEEEEeCCCCcEEEE
Q 045675 283 FELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSV---DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 283 ~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~---~~~~~yd~~t~~~~~v 338 (382)
=+||+++-. ....+.+|++......+.+..+|+ +++... +.+.+||.++++....
T Consensus 298 ~~V~VID~~-t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGL-VGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECC-CCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 367777764 457778887766555667777887 665554 2899999999886654
No 123
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=81.03 E-value=43 Score=32.69 Aligned_cols=192 Identities=15% Similarity=0.053 Sum_probs=95.3
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC-CeeeecCC-
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG-KWKEVAAG- 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~-~W~~~~~~- 197 (382)
...++++|..+++...+...... .. ....+.+.|.++ +-++.... .......+.+++..++ ..+.+...
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~-----~~--~~~~~~~spdg~-~l~~~~~~-~~~~~~~v~~~d~~~g~~~~~~~~~~ 304 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK-----EK--FLTNLSWSPDEN-ILYVAEVN-RAQNECKVNAYDAETGRFVRTLFVET 304 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT-----TC--EEEEEEECTTSS-EEEEEEEC-TTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCCC-----ce--eEeeEEEECCCC-EEEEEEeC-CCCCeeEEEEEECCCCceeeEEEEcc
Confidence 45799999999987665432211 11 233566666543 33332221 1122347888888887 66554321
Q ss_pred CCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeee-EEE-eCCe-EEEEEecC
Q 045675 198 TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVK-ALS-YDQS-LALAVYPG 272 (382)
Q Consensus 198 ~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~-l~~-~~g~-L~~~~~~~ 272 (382)
..............- +|.+.+....+ ....|..+|..++....+..... .... +.. -+|+ |++....
T Consensus 305 ~~~~~~~~~~~~~sp~~dg~~l~~~~~~----g~~~l~~~~~~~~~~~~l~~~~~---~v~~~~~~spdg~~l~~~~~~- 376 (706)
T 2z3z_A 305 DKHYVEPLHPLTFLPGSNNQFIWQSRRD----GWNHLYLYDTTGRLIRQVTKGEW---EVTNFAGFDPKGTRLYFESTE- 376 (706)
T ss_dssp CSSCCCCCSCCEECTTCSSEEEEEECTT----SSCEEEEEETTSCEEEECCCSSS---CEEEEEEECTTSSEEEEEESS-
T ss_pred CCCeECccCCceeecCCCCEEEEEEccC----CccEEEEEECCCCEEEecCCCCe---EEEeeeEEcCCCCEEEEEecC-
Confidence 110000000112223 78877766554 23578888877776666532211 1222 232 2554 5444443
Q ss_pred CCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC-----eEEEEeCCCCcE
Q 045675 273 LGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD-----QFFLFNPKTKRN 335 (382)
Q Consensus 273 ~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~-----~~~~yd~~t~~~ 335 (382)
. ......||.++-..+ . ...+....-...+.+..+|. |++...+ .++.+|+++++.
T Consensus 377 -~----~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 377 -A----SPLERHFYCIDIKGG-K-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp -S----CTTCBEEEEEETTCC-C-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred -C----CCceEEEEEEEcCCC-C-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 1 223567777654322 1 12222111133455566776 4444332 588999988873
No 124
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=80.92 E-value=27 Score=30.31 Aligned_cols=138 Identities=14% Similarity=0.156 Sum_probs=70.3
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC---CeeeecCC
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG---KWKEVAAG 197 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~---~W~~~~~~ 197 (382)
..++.+||.+++...+..... ...++.+++..+ +-.|. .. ....+.+|+..+. ..+.....
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~----------~p~gia~~~dg~-~lyv~--d~---~~~~I~~~~~~~~~~~~~~~~~~~ 228 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELH----------VPGGAEVSADSS-FVLVA--EF---LSHQIVKYWLEGPKKGTAEVLVKI 228 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEES----------CCCEEEECTTSS-EEEEE--EG---GGTEEEEEESSSTTTTCEEEEEEC
T ss_pred ceEEEEeCCCCEEEEeccCCc----------cCcceEECCCCC-EEEEE--eC---CCCeEEEEECCCCcCCccceEEeC
Confidence 467888888776544321100 122566666433 22121 10 2247788887653 33332211
Q ss_pred CCeeEEeCCcceEEE--CceEEEEeeccccc-----ccccEEEEEECCCceeeEeCCCCCCC-CCeeeEEEeCCeEEEEE
Q 045675 198 TGSCVIYGGQDAVAV--KGVLHWIANGIGVL-----VNEKFVVSYDMNLELFWRTAMPELPT-DCYVKALSYDQSLALAV 269 (382)
Q Consensus 198 ~~~~~~~~~~~~v~~--~G~lywl~~~~~~~-----~~~~~i~~fD~~~~~~~~i~~P~~~~-~~~~~l~~~~g~L~~~~ 269 (382)
+. + .++.+ +|.+ |++...... .....|..||...+....+..|.... .....+...+|.|++..
T Consensus 229 ~g--P-----~gi~~d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 229 PN--P-----GNIKRNADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp SS--E-----EEEEECTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred CC--C-----CCeEECCCCCE-EEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 11 1 23333 5775 444422000 01247999999888778887775321 12233445688998876
Q ss_pred ecCCCccCCCCCeEEEEEECC
Q 045675 270 YPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 270 ~~~~~~~~~~~~~~~iW~l~~ 290 (382)
.. ...+.++.++.
T Consensus 301 ~~--------~~~i~~~~~~~ 313 (322)
T 2fp8_A 301 LF--------HGSVGILVYDK 313 (322)
T ss_dssp SS--------CSEEEEEEC--
T ss_pred cC--------CCceEEEeccc
Confidence 54 55666666553
No 125
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=80.77 E-value=30 Score=30.74 Aligned_cols=185 Identities=6% Similarity=-0.005 Sum_probs=91.1
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
-+|.++.... ...+.+||..+++....-..... ....+.+.+... +-+++. .+..+.+|+.
T Consensus 216 ~~~~~~~~~~---~g~i~~~d~~~~~~~~~~~~~~~---------~i~~~~~~~~~~-~l~~~~------~d~~i~i~d~ 276 (425)
T 1r5m_A 216 DDDKFVIPGP---KGAIFVYQITEKTPTGKLIGHHG---------PISVLEFNDTNK-LLLSAS------DDGTLRIWHG 276 (425)
T ss_dssp ETTEEEEECG---GGCEEEEETTCSSCSEEECCCSS---------CEEEEEEETTTT-EEEEEE------TTSCEEEECS
T ss_pred CCCEEEEEcC---CCeEEEEEcCCCceeeeeccCCC---------ceEEEEECCCCC-EEEEEc------CCCEEEEEEC
Confidence 3566655544 45899999888754332111111 233566776543 333221 2346888887
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEE-eCCe
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALS-YDQS 264 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~-~~g~ 264 (382)
.++.-...-........ .-...-+| ....+.. ...|..+|+.+.+.... ..... ....+.. .+|.
T Consensus 277 ~~~~~~~~~~~~~~~i~---~~~~~~~~-~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~s~~~~ 343 (425)
T 1r5m_A 277 GNGNSQNCFYGHSQSIV---SASWVGDD-KVISCSM------DGSVRLWSLKQNTLLALSIVDGV---PIFAGRISQDGQ 343 (425)
T ss_dssp SSBSCSEEECCCSSCEE---EEEEETTT-EEEEEET------TSEEEEEETTTTEEEEEEECTTC---CEEEEEECTTSS
T ss_pred CCCccceEecCCCccEE---EEEECCCC-EEEEEeC------CCcEEEEECCCCcEeEecccCCc---cEEEEEEcCCCC
Confidence 76532221111110111 01122256 3333332 24899999987654333 22211 2223332 2566
Q ss_pred EEEEEecCCCccCCCCCeEEEEEECCCC-----------C------eeEEEEeecC--C-cccceEEeeCCcEE-EEEcC
Q 045675 265 LALAVYPGLGFRSRLSNRFELWVMNEGK-----------G------WTRTFNTAFE--R-IAWPVGSFRDSKII-MKSVD 323 (382)
Q Consensus 265 L~~~~~~~~~~~~~~~~~~~iW~l~~~~-----------~------W~~~~~i~~~--~-~~~~~~~~~~g~l~-l~~~~ 323 (382)
+.++... ...+.+|.+.... + +..+..+... . ....+.+..++..+ ....+
T Consensus 344 ~l~~~~~--------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 344 KYAVAFM--------DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp EEEEEET--------TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred EEEEEEC--------CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 5555554 5688899886432 0 1144444332 1 24445555667644 44444
Q ss_pred -eEEEEeCC
Q 045675 324 -QFFLFNPK 331 (382)
Q Consensus 324 -~~~~yd~~ 331 (382)
.+.+||++
T Consensus 416 g~i~iw~~~ 424 (425)
T 1r5m_A 416 QEGSVVAIP 424 (425)
T ss_dssp SCCEEEECC
T ss_pred ceEEEEeec
Confidence 78888876
No 126
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=79.81 E-value=48 Score=32.51 Aligned_cols=190 Identities=12% Similarity=0.055 Sum_probs=98.8
Q ss_pred eeEEEEccccccee--ccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 121 MAFVLWNPATNEFK--GLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 121 ~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
..+++++.-|++.. .+-..+.. .. ...+..+.+++ .|-++.... ......+.+.+..++.|+.+....
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~-----~~--~~~~~~~SpDG-~~l~~~~~~--~~~~~~l~~~~~~~~~~~~l~~~~ 271 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGD-----PT--TFLQSDLSRDG-KYLFVYILR--GWSENDVYWKRPGEKDFRLLVKGV 271 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCC-----TT--CEEEEEECTTS-CCEEEEEEE--TTTEEEEEEECTTCSSCEEEEECS
T ss_pred CEEEEEECCCCchhceEEEecCCC-----CE--EEEEEEECCCC-CEEEEEEeC--CCCceEEEEEcCCCCceEEeecCC
Confidence 35888888877632 22222111 01 13355666654 454444332 112234555555566777765442
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCce---eeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCc
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL---FWRTAMPELPTDCYVKALSYDQSLALAVYPGLGF 275 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~---~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~ 275 (382)
... ...+..+|.+|.....+. ....|..+|+.+.. |+.+-.+... .....+...++.|.+....
T Consensus 272 ~~~-----~~~~~~~g~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~l~~~~~~~~~lv~~~~~---- 338 (695)
T 2bkl_A 272 GAK-----YEVHAWKDRFYVLTDEGA---PRQRVFEVDPAKPARASWKEIVPEDSS-ASLLSVSIVGGHLSLEYLK---- 338 (695)
T ss_dssp SCC-----EEEEEETTEEEEEECTTC---TTCEEEEEBTTBCSGGGCEEEECCCSS-CEEEEEEEETTEEEEEEEE----
T ss_pred Cce-----EEEEecCCcEEEEECCCC---CCCEEEEEeCCCCCccCCeEEecCCCC-CeEEEEEEECCEEEEEEEE----
Confidence 211 123335666666654321 13589999997644 6666433211 1122234458888777665
Q ss_pred cCCCCCeEEEEEECCCCCeeEEEEeecCCc--ccceEEeeCCc-EEEEEcC-----eEEEEeCCCCcEEEEe
Q 045675 276 RSRLSNRFELWVMNEGKGWTRTFNTAFERI--AWPVGSFRDSK-IIMKSVD-----QFFLFNPKTKRNFILP 339 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~--~~~~~~~~~g~-l~l~~~~-----~~~~yd~~t~~~~~v~ 339 (382)
....+||.++-. + .....+.+... ...+....+++ +++.... .++.||+++++.+.+.
T Consensus 339 ----dg~~~l~~~~~~-g-~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 339 ----DATSEVRVATLK-G-KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp ----TTEEEEEEEETT-C-CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred ----CCEEEEEEEeCC-C-CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 556778887633 2 23344544321 22222233454 5555432 7999999998876663
No 127
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=79.51 E-value=48 Score=32.29 Aligned_cols=209 Identities=8% Similarity=-0.042 Sum_probs=108.2
Q ss_pred eccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
++.+|.|+..+.. ...++.+++.......+-..... ...|+++|..++.-.+. + .....+++.
T Consensus 357 d~~~~~ly~sD~~--~~~I~r~~~~g~~~~~v~~~~~~---------~p~GlAvD~~~~~lY~t---D---~~~~~I~v~ 419 (619)
T 3s94_A 357 DPVEGYIYWTDDE--VRAIRRSFIDGSGSQFVVTAQIA---------HPDGIAVDWVARNLYWT---D---TGTDRIEVT 419 (619)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTTEEEEE---E---TTTTEEEEE
T ss_pred EcCCCeEEEEeCC--CCeEEEEEcCCCccEEEEECCCC---------CcCceEEecccCcEEEE---e---CCCCcEEEE
Confidence 3446777776653 44677777765443333222111 12378888765533221 1 133578888
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
++.+..-+.+....-. . ..++.+ +|.|||..... ...|..+++....-..+- .... ...-.|+..
T Consensus 420 ~~~G~~~~~l~~~~l~----~-P~~iavdp~~G~ly~tD~g~-----~~~I~r~~~dG~~~~~l~-~~~l-~~P~GlalD 487 (619)
T 3s94_A 420 RLNGTMRKILISEDLE----E-PRAIVLDPMVGYMYWTDWGE-----IPKIERAALDGSDRVVLV-NTSL-GWPNGLALD 487 (619)
T ss_dssp ETTSCSCEEEECTTCC----S-EEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEE-CSSC-SCEEEEEEE
T ss_pred eCCCCeEEEEEECCCC----C-eeeEEEEcCCCcEEEecCCC-----CCEEEEEccCCCccEEEE-eCCC-CCCeeeEEc
Confidence 8876543333221000 1 133333 59999987543 248999998754333321 1111 133445554
Q ss_pred --CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEee-CCcEEEEEcC--eEEEEeCCCCcEE
Q 045675 262 --DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFR-DSKIIMKSVD--QFFLFNPKTKRNF 336 (382)
Q Consensus 262 --~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~~~--~~~~yd~~t~~~~ 336 (382)
+++||++... ...++...++.. . .++. +. ..+..|.++.- ++.||+.... .+...|..++.-+
T Consensus 488 ~~~~~LY~aD~~--------~~~I~~~~~dG~-~-~~~~-~~-~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~ 555 (619)
T 3s94_A 488 YDEGKIYWGDAK--------TDKIEVMNTDGT-G-RRVL-VE-DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAERE 555 (619)
T ss_dssp TTTTEEEEEETT--------TTEEEEEESSSC-C-CEEE-EE-CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEE
T ss_pred ccCCEEEEEECC--------CCEEEEEecCCC-c-eEEE-ec-cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceE
Confidence 7899998775 455555555443 2 2211 11 23445544432 3345555544 8999999998544
Q ss_pred EEeeeCCCCCeEEEEEEeec
Q 045675 337 ILPIDSGMGYSYKVFTYVDS 356 (382)
Q Consensus 337 ~v~~~~~~~~~~~~~~y~~S 356 (382)
.+.- .....+.+..|.++
T Consensus 556 ~~~~--~~~~~~~i~~~~~~ 573 (619)
T 3s94_A 556 VIID--QLPDLMGLKATNVH 573 (619)
T ss_dssp EEEC--SCCCEEEEEEEESS
T ss_pred EEec--CCCCCceeeecccc
Confidence 4322 12113455566554
No 128
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=79.47 E-value=25 Score=30.34 Aligned_cols=106 Identities=11% Similarity=0.067 Sum_probs=59.2
Q ss_pred EECceEEEEeecccccccccEEEEEECCCceee-EeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEE
Q 045675 211 AVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVM 288 (382)
Q Consensus 211 ~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l 288 (382)
..+|.+|...... ..|..+|+.+.+.. .+..+... ....+.. -+|+..++... ....+.+|.+
T Consensus 8 ~~~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~~~v~~~-------~~~~i~~~d~ 72 (349)
T 1jmx_B 8 KAGHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDKF--GPGTAMMAPDNRTAYVLNN-------HYGDIYGIDL 72 (349)
T ss_dssp CTTCEEEEEEETT------TEEEEEETTTTEEEEEEECSSCC--SSCEEEECTTSSEEEEEET-------TTTEEEEEET
T ss_pred cCCCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCCC--CCceeEECCCCCEEEEEeC-------CCCcEEEEeC
Confidence 3355665555433 58999999887664 44655411 1123333 36654333333 2567888877
Q ss_pred CCCCCeeEEEEeecCCc-------ccceEEeeCCc-EEEEE-------------cCeEEEEeCCCCc
Q 045675 289 NEGKGWTRTFNTAFERI-------AWPVGSFRDSK-IIMKS-------------VDQFFLFNPKTKR 334 (382)
Q Consensus 289 ~~~~~W~~~~~i~~~~~-------~~~~~~~~~g~-l~l~~-------------~~~~~~yd~~t~~ 334 (382)
+.. ..+..+..... ...+.+..+|+ |++.. ...+..||+++++
T Consensus 73 ~t~---~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 73 DTC---KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp TTT---EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CCC---cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 654 33344443221 34456666776 44444 2589999998844
No 129
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=79.44 E-value=52 Score=32.63 Aligned_cols=179 Identities=15% Similarity=0.081 Sum_probs=87.7
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.|||..+++... +..... ....+.+.|.. .+-+++ . .+..+.||+..++.....-...
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~~~----------~v~~~~~s~~~-~~l~~~--~----~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVTET----------PVRAGKFIARK-NWIIVG--S----DDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCSS----------CEEEEEEEGGG-TEEEEE--E----TTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEECCCCceEEEEecCCC----------cEEEEEEeCCC-CEEEEE--e----CCCeEEEEECCCCcEEEEEecC
Confidence 4478899988876443 332221 13356666643 332222 2 2458999998887653322111
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCc-eeeEeCCCCCCCCCeeeEEEe--CCeEEEEEecCCCc
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLE-LFWRTAMPELPTDCYVKALSY--DQSLALAVYPGLGF 275 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~-~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~ 275 (382)
..... .-...-+|.....+..+ ..|..+|+.++ .......... .....+... +|.+.++...
T Consensus 97 ~~~v~---~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~---- 161 (814)
T 3mkq_A 97 PDYIR---SIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGHE--HFVMCVAFNPKDPSTFASGCL---- 161 (814)
T ss_dssp SSCEE---EEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEECCS--SCEEEEEEETTEEEEEEEEET----
T ss_pred CCCEE---EEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcCCC--CcEEEEEEEcCCCCEEEEEeC----
Confidence 10000 01111244433333322 47888998765 3322211111 122333333 4555555554
Q ss_pred cCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEee--CCcEEEEEc-C-eEEEEeCCCCcEE
Q 045675 276 RSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFR--DSKIIMKSV-D-QFFLFNPKTKRNF 336 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~--~g~l~l~~~-~-~~~~yd~~t~~~~ 336 (382)
...+.+|.+..... +... .....-...+.+.. ++..++... + .+..||+++++..
T Consensus 162 ----dg~v~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 162 ----DRTVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp ----TSEEEEEETTCSSCSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred ----CCeEEEEECCCCcceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 67899999876522 2211 11111133344444 565554443 4 8889999887643
No 130
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.07 E-value=17 Score=33.32 Aligned_cols=108 Identities=10% Similarity=-0.018 Sum_probs=61.7
Q ss_pred ECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCe-EEEEEecCCCccCCCCCeEEEEEEC
Q 045675 212 VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMN 289 (382)
Q Consensus 212 ~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~ 289 (382)
-+|.+||..... ..|..+|+.+.....+...... .. ++. .+|. |++.... ... .||.++
T Consensus 140 ~~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~~--~~--ia~~~~g~~l~~~d~~-------~~~--~I~~~d 200 (409)
T 3hrp_A 140 GNNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFKG--GK--PAVTKDKQRVYSIGWE-------GTH--TVYVYM 200 (409)
T ss_dssp STTEEEEEETTT------TEEEEEETTTTEEEEEEETCCB--CB--CEECTTSSEEEEEBSS-------TTC--EEEEEE
T ss_pred CCCCEEEEecCC------CcEEEEECCCCEEEEeeccCCC--Cc--eeEecCCCcEEEEecC-------CCc--eEEEEE
Confidence 468999987643 4899999998877766332211 12 332 2444 4444332 122 566666
Q ss_pred CCCCeeE--EEEeec--CCcccceEEee-CCcEEEEEcC-eEEEEeCCCCcEEEE
Q 045675 290 EGKGWTR--TFNTAF--ERIAWPVGSFR-DSKIIMKSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 290 ~~~~W~~--~~~i~~--~~~~~~~~~~~-~g~l~l~~~~-~~~~yd~~t~~~~~v 338 (382)
...+|.. ...+.. .....-+++.. +|.||+...+ .++.||++++....+
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 5433542 211111 11134466665 6778885444 799999998876655
No 131
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=78.50 E-value=56 Score=32.49 Aligned_cols=184 Identities=11% Similarity=0.182 Sum_probs=88.5
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCC-CCeEEEEEEeecCCCCCEEEEEECCCCCeee-e--c
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDT-NDYVLVRIVNFQARYDAIAEVYSTSTGKWKE-V--A 195 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~-~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~-~--~ 195 (382)
+..+.|||..++++..+-...... . ....+.+.|.. +.+.+++. .+..+.+|+..++.-.. . .
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~----~---~V~~v~~sp~~~~~~l~sgs------~dg~I~vwdl~~~~~~~~~~~~ 142 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHS----A---SVNSVQWAPHEYGPLLLVAS------SDGKVSVVEFKENGTTSPIIID 142 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS----S---CEEEEEECCGGGCSEEEEEE------TTSEEEEEECCSSSCCCCEEEE
T ss_pred CCeEEEEECCCCcccccccccCCC----C---CeEEEEECCCCCCCEEEEEe------CCCcEEEEEeecCCCcceeEee
Confidence 458999999888643332222111 1 23456666653 34433332 23488999987662111 1 1
Q ss_pred CCCCe---eEEeCCcceE--------EECceEEEEeecccccccccEEEEEECCCc--eeeEe-CCCCCCCCCeeeEEEe
Q 045675 196 AGTGS---CVIYGGQDAV--------AVKGVLHWIANGIGVLVNEKFVVSYDMNLE--LFWRT-AMPELPTDCYVKALSY 261 (382)
Q Consensus 196 ~~~~~---~~~~~~~~~v--------~~~G~lywl~~~~~~~~~~~~i~~fD~~~~--~~~~i-~~P~~~~~~~~~l~~~ 261 (382)
..... ..+ .. ..+ .-+|.....++.+ ..|..+|+.+. .+..+ .+.... .....+...
T Consensus 143 ~~~~~v~~l~~-~p-~~~~~~~~~~~~~d~~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~~~~h~-~~V~~l~~s 213 (753)
T 3jro_A 143 AHAIGVNSASW-AP-ATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWS 213 (753)
T ss_dssp CCSSCEEEEEE-CC-CC---------CGGGCCEEEEETT------SCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEEC
T ss_pred cCCCceEEEEe-cC-cccccccccccCCCCCEEEEEECC------CeEEEEeccCCcccceeeeeecCCC-CcEEEEEec
Confidence 11110 000 00 000 0034444444433 36777777543 33332 111111 122333332
Q ss_pred -C---CeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe--ecCCcccceEEeeCCcEEEEE-cC-eEEEEeCCC
Q 045675 262 -D---QSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT--AFERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKT 332 (382)
Q Consensus 262 -~---g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i--~~~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t 332 (382)
+ |.+.+.+.. ...+.||.+....+ +...... .......-+.+..+|..++.. .+ .+.+||+++
T Consensus 214 p~~~~~~~l~s~s~--------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 214 PTVLLRSYLASVSQ--------DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCCSSSEEEEEEES--------SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCCCCCEEEEEec--------CCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 3 566665554 67899999987633 3322111 111224456666777755444 44 899999985
Q ss_pred C
Q 045675 333 K 333 (382)
Q Consensus 333 ~ 333 (382)
+
T Consensus 286 ~ 286 (753)
T 3jro_A 286 E 286 (753)
T ss_dssp S
T ss_pred C
Confidence 3
No 132
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.40 E-value=35 Score=30.11 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=31.5
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK 190 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~ 190 (382)
...+.+||..+++....-..+. ....+.+.+...+-..+.... .+..+.+|+..++.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEE----------TVYSHHMSPVSTKHCLVAVGT----RGPKVQLCDLKSGS 177 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSS----------CEEEEEECSSCSSCCEEEEEE----SSSSEEEEESSSSC
T ss_pred CCeEEEeeCCCCccceeccCCC----------ceeeeEeecCCCCCcEEEEEc----CCCeEEEEeCCCcc
Confidence 4589999998887554333222 122445555543322333322 23478899887653
No 133
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=78.38 E-value=39 Score=30.57 Aligned_cols=52 Identities=17% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCeEEEEEECCCCCeeEEEEee-cCCcccceEEeeCCcEEEE-EcC-eEEEEeCCCCc
Q 045675 280 SNRFELWVMNEGKGWTRTFNTA-FERIAWPVGSFRDSKIIMK-SVD-QFFLFNPKTKR 334 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~g~l~l~-~~~-~~~~yd~~t~~ 334 (382)
...+.+|-+... ..+..+. -...+..+.+..+|..++. ..+ .+.+||.++++
T Consensus 317 D~~i~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 317 DKTIKMWDVSTG---MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp TSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CCeEEEEECCCC---ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 678999988765 3333332 1222444566667775444 444 89999998775
No 134
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=78.16 E-value=40 Score=30.63 Aligned_cols=132 Identities=12% Similarity=0.222 Sum_probs=68.9
Q ss_pred CEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeee
Q 045675 179 AIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVK 257 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~ 257 (382)
..+.+|+..++.-...-.... .. ..++..+|.....+..+ ..|..+|+.+.+. ..+..+.... ....
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~-~~----v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~-~~v~ 366 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQ-SL----TSGMELKDNILVSGNAD------STVKIWDIKTGQCLQTLQGPNKHQ-SAVT 366 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCC-SC----EEEEEEETTEEEEEETT------SCEEEEETTTCCEEEEECSTTSCS-SCEE
T ss_pred CeEEEEECCCCCEEEEEcCCc-cc----EEEEEEeCCEEEEEeCC------CeEEEEECCCCcEEEEEccCCCCC-CCEE
Confidence 467788877654221111100 01 13344456554444433 4788999976544 4444433222 2233
Q ss_pred EEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee------cCCcccceEEeeCCcEEEEEc-C-----eE
Q 045675 258 ALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA------FERIAWPVGSFRDSKIIMKSV-D-----QF 325 (382)
Q Consensus 258 l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~------~~~~~~~~~~~~~g~l~l~~~-~-----~~ 325 (382)
-...++.+.+.+.. ...+.||.+... ..+..+. .......+.+..+|.++.... + .+
T Consensus 367 ~~~~~~~~l~s~~~--------dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l 435 (445)
T 2ovr_B 367 CLQFNKNFVITSSD--------DGTVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 435 (445)
T ss_dssp EEEECSSEEEEEET--------TSEEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred EEEECCCEEEEEeC--------CCeEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEE
Confidence 33446766555554 679999998876 2333331 112244455556665544443 3 48
Q ss_pred EEEeCCCC
Q 045675 326 FLFNPKTK 333 (382)
Q Consensus 326 ~~yd~~t~ 333 (382)
.+||.+.+
T Consensus 436 ~v~df~~~ 443 (445)
T 2ovr_B 436 LVLDFDVD 443 (445)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 88888754
No 135
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=77.90 E-value=54 Score=31.99 Aligned_cols=175 Identities=10% Similarity=-0.011 Sum_probs=88.9
Q ss_pred eEEEEccccccee-ccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCe
Q 045675 122 AFVLWNPATNEFK-GLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGS 200 (382)
Q Consensus 122 ~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~ 200 (382)
.+...+..+.+.. .+|-.... ...++.||+..+...+.-+ ....+..++..+...+.+.....
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~~---------~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~- 79 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGVK---------EASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGL- 79 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSCS---------CEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSC-
T ss_pred cEEEEECCCCCcceEEEcCCCC---------ceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCC-
Confidence 5556666554432 33432221 2558899987664333322 23466667766555444322210
Q ss_pred eEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--CCeEEEEEecCCCc
Q 045675 201 CVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--DQSLALAVYPGLGF 275 (382)
Q Consensus 201 ~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~ 275 (382)
....++.+ +|.+||..... ..|.++|+....-..+.. ... .....+++. +|.|++....
T Consensus 80 ----~~P~GlAvD~~~~~LY~tD~~~------~~I~v~~~dG~~~~~l~~-~~l-~~P~~iavdp~~G~lY~tD~g---- 143 (628)
T 4a0p_A 80 ----DYPEGMAVDWLGKNLYWADTGT------NRIEVSKLDGQHRQVLVW-KDL-DSPRALALDPAEGFMYWTEWG---- 143 (628)
T ss_dssp ----SCCCEEEEETTTTEEEEEETTT------TEEEEEETTSTTCEEEEC-SSC-CCEEEEEEETTTTEEEEEECS----
T ss_pred ----CCcceEEEEeCCCEEEEEECCC------CEEEEEecCCCcEEEEEe-CCC-CCcccEEEccCCCeEEEeCCC----
Confidence 11134444 58999976543 589999997654333321 111 134455554 7888886643
Q ss_pred cCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEe--e-CCcEEEEEcC--eEEEEeCCCCcEE
Q 045675 276 RSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSF--R-DSKIIMKSVD--QFFLFNPKTKRNF 336 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~--~-~g~l~l~~~~--~~~~yd~~t~~~~ 336 (382)
....+....++.. .-..+ + ..+..|.++. . ++.||+.... .+..+|+.++..+
T Consensus 144 ---~~~~I~r~~~dG~-~~~~l--~--~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 144 ---GKPKIDRAAMDGS-ERTTL--V--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp ---SSCEEEEEETTSC-SCEEE--E--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ---CCCEEEEEeCCCC-ceEEE--E--CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 1333433334333 11111 1 2345555553 2 2346666544 7777777665443
No 136
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=77.79 E-value=37 Score=29.99 Aligned_cols=188 Identities=10% Similarity=-0.006 Sum_probs=85.8
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTS 187 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~ 187 (382)
+|-.++.... ...+.|||..+++....-.... . ....+.+.+....+.+.+ . .+..+.+++.+
T Consensus 138 dg~~l~sgs~--d~~i~iwd~~~~~~~~~~~~h~------~---~V~~~~~~~~~~~~l~s~-s-----~D~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSK--DICIKVWDLAQQVVLSSYRAHA------A---QVTCVAASPHKDSVFLSC-S-----EDNRILLWDTR 200 (344)
T ss_dssp TSSEEEEEET--TSCEEEEETTTTEEEEEECCCS------S---CEEEEEECSSCTTEEEEE-E-----TTSCEEEEETT
T ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEEEcCcC------C---ceEEEEecCCCCCceeee-c-----ccccccccccc
Confidence 5544444332 4579999998887554221111 1 133456666544432222 1 23478899988
Q ss_pred CCCeeee-cCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceee-EeCCCCCCCCCeeeEEEe-
Q 045675 188 TGKWKEV-AAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELPTDCYVKALSY- 261 (382)
Q Consensus 188 t~~W~~~-~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~~~- 261 (382)
+++-... ......... .++.. ++.+...+..+ ..|..+|+.+.+.. .+..... ....+.-.
T Consensus 201 ~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~~~~~~~~~~h~~---~v~~v~fsp 267 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLP----TSLAWHPQQSEVFVFGDEN------GTVSLVDTKSTSCVLSSAVHSQ---CVTGLVFSP 267 (344)
T ss_dssp SSSCEEECC----CCCE----EEEEECSSCTTEEEEEETT------SEEEEEESCC--CCEEEECCSS---CEEEEEECS
T ss_pred ccceeeeeecceeeccc----eeeeecCCCCcceEEeccC------CcEEEEECCCCcEEEEEcCCCC---CEEEEEEcc
Confidence 7653322 111110001 12222 23343333332 47888898765432 2221111 22233322
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEE-cC-eEEEEeCCCCcE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKS-VD-QFFLFNPKTKRN 335 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~-~~-~~~~yd~~t~~~ 335 (382)
+|.-+++... ....+.||-+... .......-...+.-+.+..++. ++... .| .+..+++.++..
T Consensus 268 ~g~~~lasgs-------~D~~i~vwd~~~~---~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 268 HSVPFLASLS-------EDCSLAVLDSSLS---ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSSCCEEEEE-------TTSCEEEECTTCC---EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCeEEEEEe-------CCCeEEEEECCCC---cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 4432333333 2668899965543 2221111122244455555665 55443 34 899999887643
No 137
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=77.74 E-value=23 Score=34.17 Aligned_cols=110 Identities=7% Similarity=0.024 Sum_probs=61.6
Q ss_pred cceEEECceEEEEee-cccccccccEEEEEEC-CC--ceeeEeCCCCCC-------C-CCeeeEEEeCCeEEEEEecCCC
Q 045675 207 QDAVAVKGVLHWIAN-GIGVLVNEKFVVSYDM-NL--ELFWRTAMPELP-------T-DCYVKALSYDQSLALAVYPGLG 274 (382)
Q Consensus 207 ~~~v~~~G~lywl~~-~~~~~~~~~~i~~fD~-~~--~~~~~i~~P~~~-------~-~~~~~l~~~~g~L~~~~~~~~~ 274 (382)
..++..+|.+|.... .+ .|.++|. .+ +.|+. .++... . .....++..+|+|++....
T Consensus 56 ~~P~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN-------NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN--- 124 (571)
T ss_dssp SCCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT---
T ss_pred cccEEECCEEEEEeCCCC-------EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC---
Confidence 366788999999876 33 7999998 65 45554 222210 0 0112245567887765432
Q ss_pred ccCCCCCeEEEEEECCCCC---eeEEEEee-cC-Cc-ccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEE
Q 045675 275 FRSRLSNRFELWVMNEGKG---WTRTFNTA-FE-RI-AWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFI 337 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~---W~~~~~i~-~~-~~-~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~ 337 (382)
. .+..++-..| |.....-. .. .+ ..|+. .++.||+... ..++.||.+|++..+
T Consensus 125 ------g--~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 125 ------G--HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp ------S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred ------C--EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 2 3445553223 87542110 00 11 33433 2566776654 389999999998654
No 138
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=77.52 E-value=56 Score=31.92 Aligned_cols=188 Identities=11% Similarity=-0.046 Sum_probs=101.9
Q ss_pred eccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+..+|.|...+.. ...+..+++.......+-..... ...|+++|...+...+. . .....++++
T Consensus 45 d~~~~~lywtD~~--~~~I~r~~~~g~~~~~v~~~g~~---------~P~GlAvD~~~~~LY~t---D---~~~~~I~v~ 107 (628)
T 4a0p_A 45 DVTDNRIYWTDIS--LKTISRAFMNGSALEHVVEFGLD---------YPEGMAVDWLGKNLYWA---D---TGTNRIEVS 107 (628)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTTEEEEE---E---TTTTEEEEE
T ss_pred ECCCCEEEEEECC--CCeEEEEECCCCCcEEEEeCCCC---------CcceEEEEeCCCEEEEE---E---CCCCEEEEE
Confidence 4457788777654 45677778765544333222211 12278888765543322 1 133578888
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
+..+..=+.+.......+ .++.+ +|.|||..... ...|..+|+....-..+-- .. .....|+..
T Consensus 108 ~~dG~~~~~l~~~~l~~P-----~~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG~~~~~l~~--~~-~~P~GlalD 174 (628)
T 4a0p_A 108 KLDGQHRQVLVWKDLDSP-----RALALDPAEGFMYWTEWGG-----KPKIDRAAMDGSERTTLVP--NV-GRANGLTID 174 (628)
T ss_dssp ETTSTTCEEEECSSCCCE-----EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEEC--SC-SSEEEEEEE
T ss_pred ecCCCcEEEEEeCCCCCc-----ccEEEccCCCeEEEeCCCC-----CCEEEEEeCCCCceEEEEC--CC-CCcceEEEc
Confidence 886543222211100111 23333 69999987542 2489999998765544421 11 133445544
Q ss_pred --CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEee-CCcEEEEEcC--eEEEEeCCCCcE
Q 045675 262 --DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFR-DSKIIMKSVD--QFFLFNPKTKRN 335 (382)
Q Consensus 262 --~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~~~--~~~~yd~~t~~~ 335 (382)
+++||++... ...+....++.. -.++ + ...+..|.++.- ++.||+.... .+..+|..+++-
T Consensus 175 ~~~~~LY~aD~~--------~~~I~~~d~dG~--~~~v--~-~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 175 YAKRRLYWTDLD--------TNLIESSNMLGL--NREV--I-ADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp TTTTEEEEEETT--------TTEEEEEETTSC--SCEE--E-EECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred cccCEEEEEECC--------CCEEEEEcCCCC--ceEE--e-eccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCc
Confidence 6889998875 455555444443 2222 1 123345655543 3447766653 899999877753
No 139
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=77.46 E-value=33 Score=29.29 Aligned_cols=179 Identities=12% Similarity=0.085 Sum_probs=89.1
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.||+..+++....-..... ....+.+.+.. .+-+.+ . .+..+.+|+..++.-...-....
T Consensus 44 dg~i~iw~~~~~~~~~~~~~h~~---------~v~~~~~~~~~-~~l~s~--~----~d~~i~vwd~~~~~~~~~~~~~~ 107 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTISGHKL---------GISDVAWSSDS-NLLVSA--S----DDKTLKIWDVSSGKCLKTLKGHS 107 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSS---------CEEEEEECTTS-SEEEEE--E----TTSEEEEEETTTCCEEEEEECCS
T ss_pred CCeEEEEeCCCcccchhhccCCC---------ceEEEEEcCCC-CEEEEE--C----CCCEEEEEECCCCcEEEEEcCCC
Confidence 45788899887765542221111 13356666643 332222 1 33578999888764221111000
Q ss_pred eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccC
Q 045675 200 SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS-YDQSLALAVYPGLGFRS 277 (382)
Q Consensus 200 ~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~ 277 (382)
.... .....-+|.+...+..+ ..|..+|+.+.+... +..... ....+.. .+|.+.+....
T Consensus 108 ~~v~---~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~------ 169 (312)
T 4ery_A 108 NYVF---CCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSY------ 169 (312)
T ss_dssp SCEE---EEEECSSSSEEEEEETT------SCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEET------
T ss_pred CCEE---EEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEEecCCCC---cEEEEEEcCCCCEEEEEeC------
Confidence 0000 00111134433333332 478889998765432 222111 1222332 25666655554
Q ss_pred CCCCeEEEEEECCCCCeeEEEEeec--CCcccceEEeeCCcEEEE-EcC-eEEEEeCCCCcEEE
Q 045675 278 RLSNRFELWVMNEGKGWTRTFNTAF--ERIAWPVGSFRDSKIIMK-SVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 278 ~~~~~~~iW~l~~~~~W~~~~~i~~--~~~~~~~~~~~~g~l~l~-~~~-~~~~yd~~t~~~~~ 337 (382)
...+.+|.+... ..+..+.. ......+.+..++..++. ..+ .+..||+++++...
T Consensus 170 --d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 170 --DGLCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp --TSCEEEEETTTC---CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred --CCcEEEEECCCC---ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 668999998765 22333311 112334555667775444 444 89999999886543
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=76.67 E-value=37 Score=29.46 Aligned_cols=178 Identities=10% Similarity=0.098 Sum_probs=90.3
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
+..+.+||..+++... +...+.. ...+.+.|.. .+-+.+ . ....+.+|+..++.-...-...
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~----------~~~~~~spdg-~~l~~g--~----~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVD----------AWTLAFSPDS-QYLATG--T----HVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTC----------CCCEEECTTS-SEEEEE--C----TTSEEEEEETTTCSEEEEEECS
T ss_pred CCcEEEEECCCCCEEEEEeCCCcc----------EEEEEECCCC-CEEEEE--c----CCCcEEEEEcCCCceeEEecCC
Confidence 5689999998876443 3222211 1135556643 232222 1 3457888888766422111110
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-eCCeEEEEEecCCCcc
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS-YDQSLALAVYPGLGFR 276 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~ 276 (382)
..... .-...-+|.+...+..+ ..|..+|+.+.+... +..... ....+.. -+|.+.+....
T Consensus 164 ~~~v~---~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~~---~v~~l~~spd~~~l~s~s~----- 226 (321)
T 3ow8_A 164 GKFIL---SIAYSPDGKYLASGAID------GIINIFDIATGKLLHTLEGHAM---PIRSLTFSPDSQLLVTASD----- 226 (321)
T ss_dssp SSCEE---EEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS---CCCEEEECTTSCEEEEECT-----
T ss_pred CceEE---EEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEEEcccCC---ceeEEEEcCCCCEEEEEcC-----
Confidence 10000 01112245554444433 478889998765433 222111 1222332 25665554443
Q ss_pred CCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEEE
Q 045675 277 SRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 277 ~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~~ 337 (382)
...+.||.+... .....+.- ...+.-+.+..+|..++.. .+ .+.+||+++++...
T Consensus 227 ---dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 227 ---DGYIKIYDVQHA---NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp ---TSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ---CCeEEEEECCCc---ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 678999998765 23333321 1123445556677654444 44 89999999876443
No 141
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.59 E-value=38 Score=29.52 Aligned_cols=66 Identities=15% Similarity=-0.005 Sum_probs=41.9
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC-cccceEEeeCCcEEEEEcC-eEEEEeCCC--CcEEE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER-IAWPVGSFRDSKIIMKSVD-QFFLFNPKT--KRNFI 337 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~g~l~l~~~~-~~~~yd~~t--~~~~~ 337 (382)
+|.+.+.... ...+.+|.+... ..+..+.... -..-+.+..++.++....+ .+.+||+++ ++|..
T Consensus 213 ~~~~l~~~~~--------d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~ 281 (372)
T 1k8k_C 213 NGSRVAWVSH--------DSTVCLADADKK---MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSF 281 (372)
T ss_dssp SSSEEEEEET--------TTEEEEEEGGGT---TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEeC--------CCEEEEEECCCC---ceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEE
Confidence 5655554443 678999998765 2344443221 2444566677877666655 888999988 77665
Q ss_pred E
Q 045675 338 L 338 (382)
Q Consensus 338 v 338 (382)
+
T Consensus 282 ~ 282 (372)
T 1k8k_C 282 G 282 (372)
T ss_dssp C
T ss_pred e
Confidence 4
No 142
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=76.38 E-value=24 Score=34.93 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=60.9
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCC--ceeeEe-CCCCCC-----CC-CeeeEEEeCCeEEEEEecCCCccCC
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNL--ELFWRT-AMPELP-----TD-CYVKALSYDQSLALAVYPGLGFRSR 278 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~--~~~~~i-~~P~~~-----~~-~~~~l~~~~g~L~~~~~~~~~~~~~ 278 (382)
.++..+|.+|.....+ .|.++|..| +.|+.- ..+... .. .....+..+|+|++....
T Consensus 65 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d------- 130 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFS-------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD------- 130 (689)
T ss_dssp CCEEETTEEEEECGGG-------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-------
T ss_pred cCEEECCEEEEEcCCC-------eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-------
Confidence 5678899999976554 799999865 456542 111100 00 112235567777665432
Q ss_pred CCCeEEEEEECCCCC-eeEEEEeecC---Cc-ccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEE
Q 045675 279 LSNRFELWVMNEGKG-WTRTFNTAFE---RI-AWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFI 337 (382)
Q Consensus 279 ~~~~~~iW~l~~~~~-W~~~~~i~~~---~~-~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~ 337 (382)
..+..+-.+..+. |......+.. .+ ..|+. .++.|++... ..++.||.+|++..+
T Consensus 131 --g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 131 --GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp --SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred --CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 3333333333322 8765421111 11 33433 2555666542 389999999998544
No 143
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=76.30 E-value=36 Score=29.16 Aligned_cols=130 Identities=11% Similarity=0.059 Sum_probs=62.8
Q ss_pred CEEEEEECCCCCeeeecCCCCeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCe
Q 045675 179 AIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCY 255 (382)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~ 255 (382)
..+.+|+..++.-...-.... ... .++. -+|.+...++.+ ..|..+|+.+.+-... .... ..
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~-~~v----~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~~~~~~~~~~~----~v 259 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHT-GYL----NTVTVSPDGSLCASGGKD------GQAMLWDLNEGKHLYTLDGGD----II 259 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS-SCE----EEEEECTTSSEEEEEETT------CEEEEEETTTTEEEEEEECSS----CE
T ss_pred CEEEEEECCCCceeeEecCCC-CcE----EEEEECCCCCEEEEEeCC------CeEEEEEeccCceeeeecCCc----eE
Confidence 467888887764332211111 011 1122 245554444333 4788889887654322 2221 12
Q ss_pred eeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-------C---CcccceEEeeCCcEEEEE-cC-
Q 045675 256 VKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-------E---RIAWPVGSFRDSKIIMKS-VD- 323 (382)
Q Consensus 256 ~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-------~---~~~~~~~~~~~g~l~l~~-~~- 323 (382)
..+....+...++... ...+.||.++.. .....+.. . ..+.-+.+..+|..++.. .+
T Consensus 260 ~~~~~~~~~~~~~~~~--------d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 260 NALCFSPNRYWLCAAT--------GPSIKIWDLEGK---IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp EEEEECSSSSEEEEEE--------TTEEEEEETTTT---EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred EeeecCCCCceeeccC--------CCEEEEEECCCC---eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 2233333333333333 567888887654 12222211 1 113345566677755544 44
Q ss_pred eEEEEeCCCCc
Q 045675 324 QFFLFNPKTKR 334 (382)
Q Consensus 324 ~~~~yd~~t~~ 334 (382)
.+.+||++|++
T Consensus 329 ~v~iW~~~tGt 339 (340)
T 4aow_A 329 LVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEEEC--
T ss_pred EEEEEeCCCcC
Confidence 89999998874
No 144
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=76.29 E-value=23 Score=30.58 Aligned_cols=107 Identities=11% Similarity=-0.042 Sum_probs=60.1
Q ss_pred Cce-EEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 213 KGV-LHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 213 ~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
+|. +||..... ..|..+|.. .+.+.+..|... ...+.. -+|+|++.... ...+.+|..+
T Consensus 55 ~g~~l~~~d~~~------~~i~~~~~~-g~~~~~~~~~~~---~~gl~~d~dG~l~v~~~~--------~~~v~~~~~~- 115 (305)
T 3dr2_A 55 AQRTLVWSDLVG------RRVLGWRED-GTVDVLLDATAF---TNGNAVDAQQRLVHCEHG--------RRAITRSDAD- 115 (305)
T ss_dssp GGTEEEEEETTT------TEEEEEETT-SCEEEEEESCSC---EEEEEECTTSCEEEEETT--------TTEEEEECTT-
T ss_pred CCCEEEEEECCC------CEEEEEeCC-CCEEEEeCCCCc---cceeeECCCCCEEEEECC--------CCEEEEECCC-
Confidence 454 89987654 478999984 445655444321 233333 37887766553 3455555443
Q ss_pred CCCeeEEEEe-ecCCc--ccceEEeeCCcEEEEE-------------------cCeEEEEeCCCCcEEEEe
Q 045675 291 GKGWTRTFNT-AFERI--AWPVGSFRDSKIIMKS-------------------VDQFFLFNPKTKRNFILP 339 (382)
Q Consensus 291 ~~~W~~~~~i-~~~~~--~~~~~~~~~g~l~l~~-------------------~~~~~~yd~~t~~~~~v~ 339 (382)
. ........ ..... ..-+.+..+|.+++.. ...++.||+++++++.+.
T Consensus 116 g-~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 116 G-QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp S-CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred C-CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 2 23332211 11011 2336666778888842 127999999888877653
No 145
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=76.14 E-value=39 Score=29.46 Aligned_cols=101 Identities=10% Similarity=0.025 Sum_probs=56.5
Q ss_pred ceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEE-EeCCeEEEEEecCCCccCCCCCeEEEEEECCCC
Q 045675 214 GVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKAL-SYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK 292 (382)
Q Consensus 214 G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~ 292 (382)
|.+||....+ ..|..+|+.+.+...+..|.. ...++ .-+|++.+.... . |+.++...
T Consensus 61 ~~l~~~d~~~------~~i~~~d~~~~~~~~~~~~~~----v~~i~~~~dg~l~v~~~~----------g--l~~~d~~~ 118 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHLASGRKTVHALPFM----GSALAKISDSKQLIASDD----------G--LFLRDTAT 118 (326)
T ss_dssp TEEEEEEGGG------TEEEEEETTTTEEEEEECSSC----EEEEEEEETTEEEEEETT----------E--EEEEETTT
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEECCCc----ceEEEEeCCCeEEEEECC----------C--EEEEECCC
Confidence 7899987654 489999999988877766532 23333 357887765421 2 44444322
Q ss_pred C-eeEEEEeecC-Cc--ccceEEeeCCcEEEEEc--------CeEEEEeCCCCcEEEE
Q 045675 293 G-WTRTFNTAFE-RI--AWPVGSFRDSKIIMKSV--------DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 293 ~-W~~~~~i~~~-~~--~~~~~~~~~g~l~l~~~--------~~~~~yd~~t~~~~~v 338 (382)
+ .......+.. .. ...+.+..+|.+++... ..++.|| +++.+.+
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 2 4333222110 11 22344555677776553 2788888 4555544
No 146
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=75.52 E-value=48 Score=30.18 Aligned_cols=196 Identities=10% Similarity=-0.027 Sum_probs=100.7
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
+.+|-|++.+.. ...+.++|+.+++...+...... .. +.+++..+ + ++.. . ......+.+++
T Consensus 139 d~~g~lyv~d~~--~~~I~~id~~~g~~~~~~~~~~~----------~~-ia~~~~g~-~-l~~~-d--~~~~~~I~~~d 200 (409)
T 3hrp_A 139 VGNNTVLAYQRD--DPRVRLISVDDNKVTTVHPGFKG----------GK-PAVTKDKQ-R-VYSI-G--WEGTHTVYVYM 200 (409)
T ss_dssp CSTTEEEEEETT--TTEEEEEETTTTEEEEEEETCCB----------CB-CEECTTSS-E-EEEE-B--SSTTCEEEEEE
T ss_pred eCCCCEEEEecC--CCcEEEEECCCCEEEEeeccCCC----------Cc-eeEecCCC-c-EEEE-e--cCCCceEEEEE
Confidence 457777766653 45789999998887665433211 11 45565543 1 1111 1 11112667777
Q ss_pred CCCCC-eeeecCCCC-eeEEeCCcceEEE-CceEEEEeecccccccccEEEEEECCCceeeEe----CCCCCCCCCe-e-
Q 045675 186 TSTGK-WKEVAAGTG-SCVIYGGQDAVAV-KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT----AMPELPTDCY-V- 256 (382)
Q Consensus 186 s~t~~-W~~~~~~~~-~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i----~~P~~~~~~~-~- 256 (382)
..++. .+....... .... ...-++.- +|.+|+. ... ..|..+|+.+.....+ ..+.. ... .
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~-p~~iav~p~~g~lyv~-d~~------~~I~~~d~~~~~~~~~~~~~~~g~~--~~~P~~ 270 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGK-IGAVALDETEEWLYFV-DSN------KNFGRFNVKTQEVTLIKQLELSGSL--GTNPGP 270 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSC-CCBCEECTTSSEEEEE-CTT------CEEEEEETTTCCEEEEEECCCCSCC--CCSSCC
T ss_pred cCCCceeEEeeeccchhcCC-cEEEEEeCCCCeEEEE-ECC------CcEEEEECCCCCEEEEecccccCCC--CCCccc
Confidence 65442 233311101 1111 10122222 6899993 322 3899999988766555 22111 122 2
Q ss_pred eEEEe--CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee-c----------CCcccce--EEeeCCcEEEEE
Q 045675 257 KALSY--DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA-F----------ERIAWPV--GSFRDSKIIMKS 321 (382)
Q Consensus 257 ~l~~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~-~----------~~~~~~~--~~~~~g~l~l~~ 321 (382)
.++.. +|.|++.... ... |+.++....-....--. . ..+..|. ++..+|.||+..
T Consensus 271 ~ia~~p~~g~lyv~d~~--------~~~--I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQN--------LSS--VYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp EEEEETTTTEEEEEETT--------TTE--EEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred cEEEeCCCCEEEEEeCC--------CCE--EEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 55544 5888887664 344 44444331111111100 0 0123344 445677888888
Q ss_pred c-C--eEEEEeCCCCcEEEEe
Q 045675 322 V-D--QFFLFNPKTKRNFILP 339 (382)
Q Consensus 322 ~-~--~~~~yd~~t~~~~~v~ 339 (382)
. . ++..+|+.++++..+.
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEEe
Confidence 6 5 8999998888776664
No 147
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=75.43 E-value=38 Score=28.92 Aligned_cols=176 Identities=16% Similarity=0.189 Sum_probs=86.7
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeee-ecCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKE-VAAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~-~~~~ 197 (382)
...+.|||..+++... +..... ....+.+.+.. .+-+.+ . .+..+.+|+..++.-.. ....
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~----------~v~~~~~~~~~-~~l~s~-~-----~d~~i~iwd~~~~~~~~~~~~~ 148 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHSN----------YVFCCNFNPQS-NLIVSG-S-----FDESVRIWDVKTGKCLKTLPAH 148 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS----------CEEEEEECSSS-SEEEEE-E-----TTSCEEEEETTTCCEEEEECCC
T ss_pred CCEEEEEECCCCcEEEEEcCCCC----------CEEEEEEcCCC-CEEEEE-e-----CCCcEEEEECCCCEEEEEecCC
Confidence 4588999988776433 221111 13345666643 232222 1 23478899888764221 1111
Q ss_pred CCeeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-eCCeEEEEEecCC
Q 045675 198 TGSCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS-YDQSLALAVYPGL 273 (382)
Q Consensus 198 ~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~ 273 (382)
... . ..+. -+|.+...+..+ ..|..+|+.+.+... +...... ....+.. -+|+..++...
T Consensus 149 ~~~--v----~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~-- 212 (312)
T 4ery_A 149 SDP--V----SAVHFNRDGSLIVSSSYD------GLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATL-- 212 (312)
T ss_dssp SSC--E----EEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCSSCC--CEEEEEECTTSSEEEEEET--
T ss_pred CCc--E----EEEEEcCCCCEEEEEeCC------CcEEEEECCCCceeeEEeccCCC--ceEEEEECCCCCEEEEEcC--
Confidence 110 1 1122 245544444433 478889998765433 2222111 1222222 25665555554
Q ss_pred CccCCCCCeEEEEEECCCCCeeEEEEeecC--Cc--ccceEEeeCCcEEEEEc-C-eEEEEeCCCCcEEE
Q 045675 274 GFRSRLSNRFELWVMNEGKGWTRTFNTAFE--RI--AWPVGSFRDSKIIMKSV-D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 274 ~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~--~~--~~~~~~~~~g~l~l~~~-~-~~~~yd~~t~~~~~ 337 (382)
...+.+|.+... ..+..+... .. ........++.+++... + .+.+||+++++...
T Consensus 213 ------d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 213 ------DNTLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 273 (312)
T ss_dssp ------TTEEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE
T ss_pred ------CCeEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh
Confidence 678999988765 233333211 11 11112223455554443 3 89999999887543
No 148
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=74.32 E-value=42 Score=28.93 Aligned_cols=60 Identities=15% Similarity=0.404 Sum_probs=34.7
Q ss_pred CCeEEEEEECCCC-C-eeEEEEeecCCcccceEEeeCCcEEE-EEcC-eEEEEeCC-CCcEEEEe
Q 045675 280 SNRFELWVMNEGK-G-WTRTFNTAFERIAWPVGSFRDSKIIM-KSVD-QFFLFNPK-TKRNFILP 339 (382)
Q Consensus 280 ~~~~~iW~l~~~~-~-W~~~~~i~~~~~~~~~~~~~~g~l~l-~~~~-~~~~yd~~-t~~~~~v~ 339 (382)
...+.||.++... + |.....-.....+.-+.+..+|.++. ...+ .+.+||.. .+.|+.+.
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~ 301 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCIS 301 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEE
T ss_pred CCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEee
Confidence 6789999987631 2 54321112223344556666777544 4444 77788765 45677774
No 149
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.15 E-value=33 Score=33.74 Aligned_cols=111 Identities=14% Similarity=0.178 Sum_probs=60.3
Q ss_pred cceEEECceEEEEeecccccccccEEEEEECCC--ceeeEe-CCCCCC-----CC-CeeeEEEeCCeEEEEEecCCCccC
Q 045675 207 QDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNL--ELFWRT-AMPELP-----TD-CYVKALSYDQSLALAVYPGLGFRS 277 (382)
Q Consensus 207 ~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~--~~~~~i-~~P~~~-----~~-~~~~l~~~~g~L~~~~~~~~~~~~ 277 (382)
..++..+|.+|.....+ .|.++|..| +.|+.- ..+... .. ....++..+|+|++....
T Consensus 60 ~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------ 126 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS-------RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------ 126 (668)
T ss_dssp CCCEEETTEEEEEEGGG-------EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT------
T ss_pred cCCEEECCEEEEECCCC-------eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC------
Confidence 36678899999987654 899999865 456542 111110 00 012234567777664332
Q ss_pred CCCCeEEEEEECCCCC---eeEEEEeec-C-Cc-ccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEE
Q 045675 278 RLSNRFELWVMNEGKG---WTRTFNTAF-E-RI-AWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFI 337 (382)
Q Consensus 278 ~~~~~~~iW~l~~~~~---W~~~~~i~~-~-~~-~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~ 337 (382)
.. |..++-..| |+....-+. . .. ..|+. .++.||+... ..++.||.+|++..+
T Consensus 127 ---g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 127 ---GR--LIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp ---SE--EEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ---CE--EEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 23 444443223 875431110 0 11 23432 3555666543 379999999998554
No 150
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.97 E-value=43 Score=28.96 Aligned_cols=99 Identities=13% Similarity=0.038 Sum_probs=54.0
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCe-EEEEEecCCCccCCCCCeEEEEEECCCC-C-eeEEEEeecCCc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQS-LALAVYPGLGFRSRLSNRFELWVMNEGK-G-WTRTFNTAFERI 305 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~-~-W~~~~~i~~~~~ 305 (382)
..|..||+.+.+...+.-... ..-.++.. +|+ |++.... ...+.++.++... + ...... +..
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~---~p~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~~~~~~~~~--~~g- 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELH---VPGGAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKKGTAEVLVK--IPN- 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEES---CCCEEEECTTSSEEEEEEGG--------GTEEEEEESSSTTTTCEEEEEE--CSS-
T ss_pred ceEEEEeCCCCEEEEeccCCc---cCcceEECCCCCEEEEEeCC--------CCeEEEEECCCCcCCccceEEe--CCC-
Confidence 579999998877654411000 11123333 554 6666554 4556555555321 2 433332 222
Q ss_pred ccceEEeeCCcEEEEEc------------CeEEEEeCCCCcEEEEeeeC
Q 045675 306 AWPVGSFRDSKIIMKSV------------DQFFLFNPKTKRNFILPIDS 342 (382)
Q Consensus 306 ~~~~~~~~~g~l~l~~~------------~~~~~yd~~t~~~~~v~~~~ 342 (382)
-.-+.+..+|.|++... ..++.||++.+..+.+....
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~ 279 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPP 279 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCT
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCC
Confidence 22244445677887763 26999999877777776543
No 151
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=73.93 E-value=43 Score=32.99 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=60.5
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCCc--eeeEeCCCCCC-------C-CCeeeEEEeCCeEEEEEecCCCccC
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLE--LFWRTAMPELP-------T-DCYVKALSYDQSLALAVYPGLGFRS 277 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~--~~~~i~~P~~~-------~-~~~~~l~~~~g~L~~~~~~~~~~~~ 277 (382)
.++..+|.+|.....+ .|.++|..|. .|+.- .+... . .....++..+|+|++....
T Consensus 72 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------ 137 (677)
T 1kb0_A 72 TPVVVDGIMYVSASWS-------VVHAIDTRTGNRIWTYD-PQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------ 137 (677)
T ss_dssp CCEEETTEEEEECGGG-------CEEEEETTTTEEEEEEC-CCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT------
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCCcEEEEEc-CCCCccccccccccCCCCCceEECCEEEEEcCC------
Confidence 5678899999887644 7999999765 45432 22110 0 0112345567777765432
Q ss_pred CCCCeEEEEEECCCCC-eeEEEEeec---CCc-ccceEEeeCCcEEEEEc-------CeEEEEeCCCCcEEE
Q 045675 278 RLSNRFELWVMNEGKG-WTRTFNTAF---ERI-AWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRNFI 337 (382)
Q Consensus 278 ~~~~~~~iW~l~~~~~-W~~~~~i~~---~~~-~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~~~ 337 (382)
..+..+-.+..+. |......+. ..+ ..|+. .++.||+... ..++.||.+|++..+
T Consensus 138 ---g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 138 ---GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ---SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ---CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 2333333333322 775421010 011 23332 2555666553 389999999998654
No 152
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=73.84 E-value=71 Score=31.37 Aligned_cols=113 Identities=12% Similarity=0.051 Sum_probs=61.3
Q ss_pred EECceEEEEeecccccccccEEEEEECCCc---eeeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEE
Q 045675 211 AVKGVLHWIANGIGVLVNEKFVVSYDMNLE---LFWRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWV 287 (382)
Q Consensus 211 ~~~G~lywl~~~~~~~~~~~~i~~fD~~~~---~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~ 287 (382)
.-++.+|+++..+. ....|+..|+.+. .|+.+. |.... .. .+...++.|.+.... ...-+|+.
T Consensus 289 ~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~-~~~~~-~~-~~s~~g~~lv~~~~~--------~g~~~l~~ 354 (693)
T 3iuj_A 289 NKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLI-PERQQ-VL-TVHSGSGYLFAEYMV--------DATARVEQ 354 (693)
T ss_dssp EETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEE-CCCSS-CE-EEEEETTEEEEEEEE--------TTEEEEEE
T ss_pred ccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEe-cCCCC-EE-EEEEECCEEEEEEEE--------CCeeEEEE
Confidence 34678888876542 1358999999763 366542 22211 22 444556677666654 23334444
Q ss_pred ECCCCCeeEEEEeecCCc--ccceEEeeCC-cEEEEEcC-----eEEEEeCCCCcEEEEe
Q 045675 288 MNEGKGWTRTFNTAFERI--AWPVGSFRDS-KIIMKSVD-----QFFLFNPKTKRNFILP 339 (382)
Q Consensus 288 l~~~~~W~~~~~i~~~~~--~~~~~~~~~g-~l~l~~~~-----~~~~yd~~t~~~~~v~ 339 (382)
++-..++. ..+.+... ...+....++ .|++...+ .++.||+++++.+.+.
T Consensus 355 ~d~~g~~~--~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 355 FDYEGKRV--REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp ECTTSCEE--EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred EECCCCee--EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 44331244 33443332 1111212234 36665543 8999999999877664
No 153
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=73.77 E-value=41 Score=28.62 Aligned_cols=58 Identities=14% Similarity=0.389 Sum_probs=33.8
Q ss_pred CCeEEEEEECCCCC-eeEEEEee---cCCcccceEEeeCCcEE-EEEcC-eEEEEeCC-CCcEEEE
Q 045675 280 SNRFELWVMNEGKG-WTRTFNTA---FERIAWPVGSFRDSKII-MKSVD-QFFLFNPK-TKRNFIL 338 (382)
Q Consensus 280 ~~~~~iW~l~~~~~-W~~~~~i~---~~~~~~~~~~~~~g~l~-l~~~~-~~~~yd~~-t~~~~~v 338 (382)
...+.||.++...+ |.... +. ......-+.+..+|.++ ....+ .+.+|+.. .+.|+.+
T Consensus 228 D~~v~iWd~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC
T ss_pred CCcEEEEEeCCCCCccceee-eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEec
Confidence 67899999987534 76432 21 11223345556677754 44444 67777765 3466655
No 154
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=73.34 E-value=75 Score=31.43 Aligned_cols=162 Identities=13% Similarity=0.105 Sum_probs=88.9
Q ss_pred EEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC--C-eeeecCCCCeeEEeCCcceE-EECceEEEEeeccccccccc
Q 045675 155 GFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG--K-WKEVAAGTGSCVIYGGQDAV-AVKGVLHWIANGIGVLVNEK 230 (382)
Q Consensus 155 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~--~-W~~~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~ 230 (382)
+..+.++ +.|-++.... .......+.+++..++ . |+.+........ ..+ .-++.+|+....+. ...
T Consensus 272 ~~~~SpD-G~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-----~~~~~dg~~l~~~s~~~~---~~~ 341 (741)
T 1yr2_A 272 GASVSSD-GRWVVITSSE-GTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-----DFVDGVGDQLWFVSGDGA---PLK 341 (741)
T ss_dssp EEEECTT-SCEEEEEEEC-TTCSCCEEEEEEEETTEECCCEEEECSSSSCE-----EEEEEETTEEEEEECTTC---TTC
T ss_pred EEEECCC-CCEEEEEEEc-cCCCcceEEEEECCCCCCcccEEecCCCCceE-----EEEeccCCEEEEEECCCC---CCC
Confidence 4455443 3454444332 1113457788888776 6 877654422111 112 34557777766532 135
Q ss_pred EEEEEECCC--ceeeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCc--c
Q 045675 231 FVVSYDMNL--ELFWRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERI--A 306 (382)
Q Consensus 231 ~i~~fD~~~--~~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~--~ 306 (382)
.|...|+.+ +.|+.+- |.... ....+...++.|.+.... ....+||.++-. + .....+.+... .
T Consensus 342 ~l~~~d~~~~~~~~~~l~-~~~~~-~l~~~~~~~~~lv~~~~~--------dg~~~l~~~~~~-g-~~~~~l~~~~~~~v 409 (741)
T 1yr2_A 342 KIVRVDLSGSTPRFDTVV-PESKD-NLESVGIAGNRLFASYIH--------DAKSQVLAFDLD-G-KPAGAVSLPGIGSA 409 (741)
T ss_dssp EEEEEECSSSSCEEEEEE-CCCSS-EEEEEEEEBTEEEEEEEE--------TTEEEEEEEETT-S-CEEEECBCSSSCEE
T ss_pred EEEEEeCCCCccccEEEe-cCCCC-eEEEEEEECCEEEEEEEE--------CCEEEEEEEeCC-C-CceeeccCCCCeEE
Confidence 799999988 5787764 33221 122334457888776665 456778887633 2 23444544322 2
Q ss_pred cceEEeeCCc-EEEEEcC-----eEEEEeCCCCcEEEE
Q 045675 307 WPVGSFRDSK-IIMKSVD-----QFFLFNPKTKRNFIL 338 (382)
Q Consensus 307 ~~~~~~~~g~-l~l~~~~-----~~~~yd~~t~~~~~v 338 (382)
..+....+++ |++.... .++.||+++++.+.+
T Consensus 410 ~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 410 SGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 2233334554 6655432 899999999886655
No 155
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=73.20 E-value=57 Score=30.02 Aligned_cols=112 Identities=10% Similarity=0.065 Sum_probs=63.7
Q ss_pred ceEEEC-----ceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCC
Q 045675 208 DAVAVK-----GVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSN 281 (382)
Q Consensus 208 ~~v~~~-----G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~ 281 (382)
.++.++ |.|||.... ..|..+|+.+.+.+.+..+.. ....++. .+|.|++.... . ...
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~-------~~I~~id~~~g~v~~~~~~~~---~P~giavd~dG~lyVad~~--~----~~~ 205 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR-------DAFRHVDFVNQYVDIKTTNIG---QCADVNFTLNGDMVVVDDQ--S----SDT 205 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT-------SCEEEEETTTTEEEEECCCCS---CEEEEEECTTCCEEEEECC--S----CTT
T ss_pred ceEEEccccCCCEEEEEeCC-------CCEEEEECCCCEEEEeecCCC---CccEEEECCCCCEEEEcCC--C----Ccc
Confidence 566665 899997654 379999998888877643221 2334443 46778777664 1 111
Q ss_pred eEEEEEECCCCCeeEEEEeecCCcccceEEee-CCcEEEEEcC--eEEEEeCCCCcE
Q 045675 282 RFELWVMNEGKGWTRTFNTAFERIAWPVGSFR-DSKIIMKSVD--QFFLFNPKTKRN 335 (382)
Q Consensus 282 ~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~~~--~~~~yd~~t~~~ 335 (382)
.-.+..+....+|.....+..-....-+++.. +|.||+.... +++.||+++++.
T Consensus 206 ~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 206 NTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp SEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 22333443332343222222111122355555 6778877654 899999987776
No 156
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=72.86 E-value=99 Score=32.56 Aligned_cols=189 Identities=14% Similarity=0.166 Sum_probs=95.4
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
.+|-+++.... ...+.|||..|++... +..... ....+.+.|.. .+-+.+. .+..+.|++
T Consensus 625 ~~~~~l~s~~~--d~~i~vw~~~~~~~~~~~~~h~~----------~v~~~~~s~~~-~~l~s~~------~d~~v~vwd 685 (1249)
T 3sfz_A 625 QDGQRIASCGA--DKTLQVFKAETGEKLLDIKAHED----------EVLCCAFSSDD-SYIATCS------ADKKVKIWD 685 (1249)
T ss_dssp TTSSEEEEEET--TSCEEEEETTTCCEEEEECCCSS----------CEEEEEECTTS-SEEEEEE------TTSEEEEEE
T ss_pred CCCCEEEEEeC--CCeEEEEECCCCCEEEEeccCCC----------CEEEEEEecCC-CEEEEEe------CCCeEEEEE
Confidence 34544433332 5589999999987543 332111 23456676643 3433322 334799999
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEE----CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAV----KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS- 260 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~- 260 (382)
..++.-...-..... .. .++.+ ++.+...++. ...|..+|+.+.+.......... ....+..
T Consensus 686 ~~~~~~~~~~~~~~~-~v----~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~s 752 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSE-QV----NCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKECRNTMFGHTN--SVNHCRFS 752 (1249)
T ss_dssp TTTCCEEEEEECCSS-CE----EEEEECSSSSCCEEEEEET------TSCEEEEETTSSSEEEEECCCSS--CEEEEEEC
T ss_pred CCCCceEEEEcCCCC-cE----EEEEEecCCCceEEEEEeC------CCeEEEEECCCcchhheecCCCC--CEEEEEEe
Confidence 988753321111110 01 11111 2222222222 24688899887665433211111 2222332
Q ss_pred eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC--------------cccceEEeeCCcEE-EEEcCeE
Q 045675 261 YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER--------------IAWPVGSFRDSKII-MKSVDQF 325 (382)
Q Consensus 261 ~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~--------------~~~~~~~~~~g~l~-l~~~~~~ 325 (382)
-+|.+.+.... ...+.+|.+... . ....+.... ....+.+..+|..+ ...++.+
T Consensus 753 p~~~~l~s~s~--------dg~v~vwd~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 753 PDDELLASCSA--------DGTLRLWDVRSA-N--ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp SSTTEEEEEES--------SSEEEEEEGGGT-E--EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred cCCCEEEEEEC--------CCeEEEEeCCCC-c--ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 25665555544 678999998765 2 222222111 13334455677744 4444599
Q ss_pred EEEeCCCCcEEEE
Q 045675 326 FLFNPKTKRNFIL 338 (382)
Q Consensus 326 ~~yd~~t~~~~~v 338 (382)
..||..++.....
T Consensus 822 ~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 822 LLFDIHTSGLLAE 834 (1249)
T ss_dssp EEEETTTCCEEEE
T ss_pred EEEEecCCCceeE
Confidence 9999998875543
No 157
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=71.87 E-value=48 Score=28.54 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=30.5
Q ss_pred CCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCC----cEE-EEEcC-eEEEEeCCC
Q 045675 280 SNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDS----KII-MKSVD-QFFLFNPKT 332 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g----~l~-l~~~~-~~~~yd~~t 332 (382)
...+.||.+.....|.....+.- ...+.-+.+..++ .++ -...+ .+.+||+++
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 67899999975523776655432 1113334444443 444 34444 888898876
No 158
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=71.85 E-value=61 Score=29.76 Aligned_cols=110 Identities=9% Similarity=0.003 Sum_probs=63.0
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCe-EEEEEecCCCccCCCCCeEEEEEECC
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
+|.||+.... ..|..||+.+++...+..+.. ....++. .+|. |++.... . .......+|...+
T Consensus 149 ~g~Lyv~d~~-------~~I~~id~~~~~v~~~~~~~~---~P~~ia~d~~G~~lyvad~~--~---~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ-------HPTRLIDFEKEYVSTVYSGLS---KVRTICWTHEADSMIITNDQ--N---NNDRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT-------EEEEEEETTTTEEEEEECCCS---CEEEEEECTTSSEEEEEECC--S---CTTSEEEEEEEGG
T ss_pred CCeEEEEeCC-------CcEEEEECCCCEEEEEecCCC---CcceEEEeCCCCEEEEEeCC--C---CcccceEEEEeCC
Confidence 4889987654 389999999988776632211 2344444 3566 7777664 1 0122334444433
Q ss_pred CCCeeEEEEeecCCcccceEEee-CCcEEEEEcC--eEEEEeCCCCcEEEE
Q 045675 291 GKGWTRTFNTAFERIAWPVGSFR-DSKIIMKSVD--QFFLFNPKTKRNFIL 338 (382)
Q Consensus 291 ~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~~~--~~~~yd~~t~~~~~v 338 (382)
. +|.....+.--....-+++.. +|.||+.... +++.||++++....+
T Consensus 214 g-~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 214 S-GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp G-TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred C-ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 3 354222332111133355555 6778887754 999999998876433
No 159
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=71.49 E-value=46 Score=28.14 Aligned_cols=67 Identities=13% Similarity=0.242 Sum_probs=39.3
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
|.+|+|....+ ..+.|||..|++...+-..... .. ....+.+.+.. .+-+.+. .+..+.+++
T Consensus 34 S~~~~lAvg~D----~tV~iWd~~tg~~~~~~~~~~~-----~~--~V~~v~~~~~~-~~l~sgs------~Dg~v~iw~ 95 (318)
T 4ggc_A 34 SSGNVLAVALD----NSVYLWSASSGDILQLLQMEQP-----GE--YISSVAWIKEG-NYLAVGT------SSAEVQLWD 95 (318)
T ss_dssp CTTSEEEEEET----TEEEEEETTTCCEEEEEECCST-----TC--CEEEEEECTTS-SEEEEEE------TTSEEEEEE
T ss_pred CCCCEEEEEeC----CEEEEEECCCCCEEEEEEecCC-----CC--eEEEEEECCCC-CEEEEEE------CCCcEEEee
Confidence 56777655433 4899999999986653222111 11 23356666643 3443332 334788998
Q ss_pred CCCCC
Q 045675 186 TSTGK 190 (382)
Q Consensus 186 s~t~~ 190 (382)
..+++
T Consensus 96 ~~~~~ 100 (318)
T 4ggc_A 96 VQQQK 100 (318)
T ss_dssp TTTTE
T ss_pred cCCce
Confidence 88764
No 160
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=71.13 E-value=57 Score=29.12 Aligned_cols=109 Identities=12% Similarity=0.013 Sum_probs=60.8
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe--CCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY--DQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
+|.....++.+ ..|..+|+.+.+.......... ....+... ++.|.+.... . ....+.+|.+..
T Consensus 228 ~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~g--s----~d~~i~i~d~~~ 293 (401)
T 4aez_A 228 DGLQLASGGND------NVVQIWDARSSIPKFTKTNHNA--AVKAVAWCPWQSNLLATGGG--T----MDKQIHFWNAAT 293 (401)
T ss_dssp TSSEEEEEETT------SCEEEEETTCSSEEEEECCCSS--CCCEEEECTTSTTEEEEECC--T----TTCEEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEccCCCCCccEEecCCcc--eEEEEEECCCCCCEEEEecC--C----CCCEEEEEECCC
Confidence 55555554443 4788899987654432211111 22233333 3345554431 1 267899998876
Q ss_pred CCCeeEEEEeecCCcccceEEeeCCcEEEE-E--cC-eEEEEeCCCCcEEEE
Q 045675 291 GKGWTRTFNTAFERIAWPVGSFRDSKIIMK-S--VD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 291 ~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~-~--~~-~~~~yd~~t~~~~~v 338 (382)
. ..+..+....-...+.+..++..++. . .+ .+.+||+++++...+
T Consensus 294 ~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 294 G---ARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp C---CEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEE
T ss_pred C---CEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeE
Confidence 5 33344443333455666667775544 3 23 899999998876665
No 161
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=71.04 E-value=88 Score=31.22 Aligned_cols=137 Identities=12% Similarity=0.024 Sum_probs=73.4
Q ss_pred EEEEEECCCCCeeeecCCC-Ce---eEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCC-C-
Q 045675 180 IAEVYSTSTGKWKEVAAGT-GS---CVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPEL-P- 251 (382)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~-~~---~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~-~- 251 (382)
.+..|+..++.++...... .. ... ..-.+++. +|.+.|++..+ ..|..||..++++..+..... .
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~~lWigt~~------~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGS-NNIKAVYVDEKKSLVYIGTHA------GGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSC-SCEEEEEEETTTTEEEEEETT------TEEEEEETTTCCEEEECTTTSCCS
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCC-ccEEEEEEcCCCCEEEEEeCc------CceeEEeCCCCcEEEeecCCCCcC
Confidence 5777888877776654321 00 000 00123333 57767887653 379999999999988753211 1
Q ss_pred CCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe----ecC-CcccceEEeeCCcEEEEEcCe
Q 045675 252 TDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT----AFE-RIAWPVGSFRDSKIIMKSVDQ 324 (382)
Q Consensus 252 ~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i----~~~-~~~~~~~~~~~g~l~l~~~~~ 324 (382)
......+.+. +|.|.+.... . ++.++...+ |...... .+. .....+....+|.|++.....
T Consensus 451 ~~~v~~i~~d~~g~lwigt~~----------G--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~G 518 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTLS----------A--LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEG 518 (795)
T ss_dssp CSCEEEEEECSSSCEEEEESS----------C--EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEESSC
T ss_pred CCeeEEEEECCCCCEEEEecC----------c--eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeCCc
Confidence 1123334433 5777765543 1 233332222 5433211 111 112333444567788888778
Q ss_pred EEEEeCCCCcE
Q 045675 325 FFLFNPKTKRN 335 (382)
Q Consensus 325 ~~~yd~~t~~~ 335 (382)
++.||++++++
T Consensus 519 l~~~~~~~~~~ 529 (795)
T 4a2l_A 519 LSVFKQEGLDI 529 (795)
T ss_dssp EEEEEEETTEE
T ss_pred eEEEeCCCCeE
Confidence 99999988776
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=70.93 E-value=55 Score=28.81 Aligned_cols=114 Identities=11% Similarity=-0.011 Sum_probs=57.9
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecC-CCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQA-RYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~-~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...++++|..|++...|..... ....+.+.|..+.. ++....... .....+.+++..++..+.+....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~----------~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 235 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQ----------WLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA 235 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESS----------CEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCCCEESCCCC
T ss_pred cceEEEEECCCCceEEeecCCc----------cccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCceEEeeeCC
Confidence 3578999999988776643222 12244556622222 222222111 11346777787776655544332
Q ss_pred CeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCceeeEe-CCC
Q 045675 199 GSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMP 248 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P 248 (382)
..... . .....-+|. +++....... ....|..+|+.+.+.+.+ ..|
T Consensus 236 ~~~~~-~-~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 236 EGESC-T-HEFWVPDGSALVYVSYLKGS--PDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp TTEEE-E-EEEECTTSSCEEEEEEETTC--CCEEEEEECTTTCCEEEEEEEC
T ss_pred CCccc-c-cceECCCCCEEEEEecCCCC--CcceEEEEecCCCceEEEEcCC
Confidence 11111 0 122333675 6666654321 112599999998876655 444
No 163
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=70.82 E-value=83 Score=30.82 Aligned_cols=189 Identities=7% Similarity=0.001 Sum_probs=93.4
Q ss_pred eEEEEcccc-cceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCC-CC
Q 045675 122 AFVLWNPAT-NEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAG-TG 199 (382)
Q Consensus 122 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~-~~ 199 (382)
.++++|..+ ++...+...... .. ....+.+ |.+ ++-++.... .......+.+++..++..+.+-.. ..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~-----~~--~~~~~~~-pDg-~~l~~~~~~-~~~~~~~i~~~d~~~g~~~~~~~~~~~ 333 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ-----DI--YLARVNW-RDP-QHLSFQRQS-RDQKKLDLVEVTLASNQQRVLAHETSP 333 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS-----SE--EEEEEEE-EET-TEEEEEEEE-TTSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred EEEEEECCCCCceEEecCCCCc-----ce--EEEEEEe-CCC-CEEEEEEec-ccCCeEEEEEEECCCCceEEEEEcCCC
Confidence 788999999 886665433111 11 2334556 543 444443332 122345788888888776554222 11
Q ss_pred eeE-EeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeE--EEeCCe-EEEEEecCCCc
Q 045675 200 SCV-IYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKA--LSYDQS-LALAVYPGLGF 275 (382)
Q Consensus 200 ~~~-~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l--~~~~g~-L~~~~~~~~~~ 275 (382)
.+. . .......-+|.+++.+..+. ...|..+|..+. ...+... .. ....+ ..-+|+ |++.... .
T Consensus 334 ~~~~~-~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l~~~-~~--~v~~~~~~s~dg~~l~~~~~~--~- 401 (741)
T 2ecf_A 334 TWVPL-HNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAALTHG-NW--SVDELLAVDEKAGLAYFRAGI--E- 401 (741)
T ss_dssp SCCCC-CSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEESCCS-SS--CEEEEEEEETTTTEEEEEECS--S-
T ss_pred CcCCc-CCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeeeeec-ce--EEEeEeEEeCCCCEEEEEEeC--C-
Confidence 000 0 01123334788777766542 357888887766 4433221 11 12232 233665 4444433 1
Q ss_pred cCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEcC-----eEEEEeCCCCcEEE
Q 045675 276 RSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSVD-----QFFLFNPKTKRNFI 337 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~~-----~~~~yd~~t~~~~~ 337 (382)
....+.||.++.. + .....+....-...+.+..+|. |++...+ .++.+|.+++..+.
T Consensus 402 ---~~~~~~l~~~~~~-g-~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~ 464 (741)
T 2ecf_A 402 ---SARESQIYAVPLQ-G-GQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIAT 464 (741)
T ss_dssp ---CTTCBEEEEEETT-C-CCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEEC
T ss_pred ---CCceEEEEEEEcC-C-CCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEE
Confidence 2347889998643 2 1122222111123445556666 4333322 67788876554443
No 164
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=70.78 E-value=40 Score=32.59 Aligned_cols=113 Identities=19% Similarity=0.271 Sum_probs=61.2
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCC--ceeeEe-CCCCCCC---C-CeeeEEEeCCeEEEEEecCCCccCCCC
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNL--ELFWRT-AMPELPT---D-CYVKALSYDQSLALAVYPGLGFRSRLS 280 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~--~~~~~i-~~P~~~~---~-~~~~l~~~~g~L~~~~~~~~~~~~~~~ 280 (382)
.++..+|.+|.....+ .|.++|..| +.|+.- ..|.... + ....++..+|+|++....
T Consensus 63 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d--------- 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD--------- 126 (582)
T ss_dssp CCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---------
T ss_pred ccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---------
Confidence 5678999999976544 599999965 456653 2222110 0 012234567777765443
Q ss_pred CeEEEEEECCCCC---eeEEEEeec-C-Cc-ccceEEee--CC--cEEEEE-------cCeEEEEeCCCCcEEEE
Q 045675 281 NRFELWVMNEGKG---WTRTFNTAF-E-RI-AWPVGSFR--DS--KIIMKS-------VDQFFLFNPKTKRNFIL 338 (382)
Q Consensus 281 ~~~~iW~l~~~~~---W~~~~~i~~-~-~~-~~~~~~~~--~g--~l~l~~-------~~~~~~yd~~t~~~~~v 338 (382)
. .+..++-..| |.....-.. . .+ ..|+.... +| .|++.. +..++.||.+|++....
T Consensus 127 g--~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 127 A--SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp T--EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred C--EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 2 3444543323 875421110 0 11 34544332 13 344433 23899999999986653
No 165
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=70.61 E-value=8.8 Score=28.18 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=30.7
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEE
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIV 171 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 171 (382)
..++.++|.|++|......... ..+.+..|...+.|+|++..
T Consensus 11 A~V~~~d~~~~~W~p~~~~~g~---------s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGSTGF---------SRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCCSC---------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCCCc---------eEEEEEEECCCCEEEEEEEE
Confidence 4789999999988654421110 35678889888999999885
No 166
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=69.89 E-value=55 Score=28.46 Aligned_cols=186 Identities=15% Similarity=0.152 Sum_probs=92.9
Q ss_pred CceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
+|-+++.... +..+.|||..+++... ++.... ....+.+.|.. .+-+.+. .+..+.+|+.
T Consensus 66 d~~~l~s~s~--Dg~v~iWd~~~~~~~~~~~~~~~----------~v~~~~~s~~~-~~l~s~~------~d~~v~iw~~ 126 (340)
T 1got_B 66 DSRLLLSASQ--DGKLIIWDSYTTNKVHAIPLRSS----------WVMTCAYAPSG-NYVACGG------LDNICSIYNL 126 (340)
T ss_dssp TSSEEEEEET--TTEEEEEETTTCCEEEEEECSSS----------CEEEEEECTTS-SEEEEEE------TTCEEEEEET
T ss_pred CCCEEEEEeC--CCcEEEEECCCCCcceEeecCCc----------cEEEEEECCCC-CEEEEEe------CCCeEEEEEC
Confidence 4444433332 4589999988876443 332211 13356666643 3333222 3357889988
Q ss_pred CCCC--eeeecCCCC-eeEEeCCcceE-EECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-
Q 045675 187 STGK--WKEVAAGTG-SCVIYGGQDAV-AVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY- 261 (382)
Q Consensus 187 ~t~~--W~~~~~~~~-~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~- 261 (382)
.+.. .+....... .... .... .-+|.+.- +.. ...|..+|+.+.+......... .....+...
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~l~s-~s~------d~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~~~ 194 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYL---SCCRFLDDNQIVT-SSG------DTTCALWDIETGQQTTTFTGHT--GDVMSLSLAP 194 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCE---EEEEEEETTEEEE-EET------TSCEEEEETTTTEEEEEECCCS--SCEEEEEECT
T ss_pred ccCCCcceeEEEecCCCccE---EEEEECCCCcEEE-EEC------CCcEEEEECCCCcEEEEEcCCC--CceEEEEECC
Confidence 7642 221111100 0001 0111 22444322 222 2478889998876543211111 122333332
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRN 335 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~ 335 (382)
+|.+.+.+.. ...+.+|.+... .....+.. ......+.+..++..++.. .+ .+.+||+++++.
T Consensus 195 ~~~~l~sg~~--------d~~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 195 DTRLFVSGAC--------DASAKLWDVREG---MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp TSSEEEEEET--------TSCEEEEETTTC---SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeC--------CCcEEEEECCCC---eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 5666655554 678999988765 23333321 1224445666677755444 34 889999988754
No 167
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=68.69 E-value=63 Score=28.65 Aligned_cols=98 Identities=14% Similarity=0.094 Sum_probs=54.2
Q ss_pred cEEEEEECCCceeeEe---CCCCCCCCCeeeEEE--eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee-cC
Q 045675 230 KFVVSYDMNLELFWRT---AMPELPTDCYVKALS--YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA-FE 303 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i---~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~-~~ 303 (382)
..|..+|+.+.+-... ..|.........+.. .++.+.+.+.. ...+.+|-+..... .+..+. -.
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~--------D~~v~~wd~~~~~~--~~~~~~~h~ 249 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC--------DTTVRLWDLRITSR--AVRTYHGHE 249 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET--------TSCEEEEETTTTCC--CCEEECCCS
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC--------CCeEEEEECCCCCc--ceEEECCcC
Confidence 4788899987654332 222222112223332 25666666554 67899999874411 112221 11
Q ss_pred CcccceEEeeCCcEEEEEc-C-eEEEEeCCCCcEEE
Q 045675 304 RIAWPVGSFRDSKIIMKSV-D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 304 ~~~~~~~~~~~g~l~l~~~-~-~~~~yd~~t~~~~~ 337 (382)
..+..+.+..+|..++... + .+.+||+++++...
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 2244466666777555443 4 88999999876443
No 168
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=68.39 E-value=56 Score=27.94 Aligned_cols=158 Identities=8% Similarity=-0.016 Sum_probs=88.6
Q ss_pred EEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEE
Q 045675 153 SLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFV 232 (382)
Q Consensus 153 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i 232 (382)
..|+.+++. + ++.... +......+.+++..+++=...-.... ..+ + ......++.+|.+.... ..+
T Consensus 23 ~~Gl~~~~d-g--~Lyvst--g~~~~s~v~~iD~~tg~v~~~i~l~~-~~f-g-eGi~~~g~~lyv~t~~~------~~v 88 (266)
T 2iwa_A 23 TQGLVYAEN-D--TLFEST--GLYGRSSVRQVALQTGKVENIHKMDD-SYF-G-EGLTLLNEKLYQVVWLK------NIG 88 (266)
T ss_dssp EEEEEECST-T--EEEEEE--CSTTTCEEEEEETTTCCEEEEEECCT-TCC-E-EEEEEETTEEEEEETTC------SEE
T ss_pred cccEEEeCC-C--eEEEEC--CCCCCCEEEEEECCCCCEEEEEecCC-Ccc-e-EEEEEeCCEEEEEEecC------CEE
Confidence 358888875 2 222211 11234689999999886332211111 111 1 12334467899988755 589
Q ss_pred EEEECCCce-eeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCc------
Q 045675 233 VSYDMNLEL-FWRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERI------ 305 (382)
Q Consensus 233 ~~fD~~~~~-~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~------ 305 (382)
.++|..+.+ -..++.+ .. ....+...+++|++.. . +. .|++++-. .-....+|+...-
T Consensus 89 ~viD~~t~~v~~~i~~g-~~--~g~glt~Dg~~l~vs~-g--------s~--~l~viD~~-t~~v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQ-MK--DGWGLATDGKILYGSD-G--------TS--ILYEIDPH-TFKLIKKHNVKYNGHRVIR 153 (266)
T ss_dssp EEEETTTTEEEEEEECC-SS--SCCEEEECSSSEEEEC-S--------SS--EEEEECTT-TCCEEEEEECEETTEECCC
T ss_pred EEEECCCCcEEEEEECC-CC--CeEEEEECCCEEEEEC-C--------CC--eEEEEECC-CCcEEEEEEECCCCccccc
Confidence 999998754 4555655 11 2244555556677643 2 23 56677654 2355556654221
Q ss_pred ccceEEeeCCcEEEEEcC--eEEEEeCCCCcEE-EEee
Q 045675 306 AWPVGSFRDSKIIMKSVD--QFFLFNPKTKRNF-ILPI 340 (382)
Q Consensus 306 ~~~~~~~~~g~l~l~~~~--~~~~yd~~t~~~~-~v~~ 340 (382)
..-+.+. +|.||..... .+.+.|+++++.. .+.+
T Consensus 154 ~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 154 LNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred ceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 1122333 6778766643 9999999999854 4544
No 169
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=68.23 E-value=60 Score=28.21 Aligned_cols=198 Identities=9% Similarity=-0.095 Sum_probs=98.2
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYS 185 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vys 185 (382)
..+|.++..+.. ...++++||.+++...++... ...++.+++.. .+- +. .. ..+.+|+
T Consensus 58 ~~~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~~~-----------~v~~i~~~~dg-~l~-v~-~~------~gl~~~d 115 (326)
T 2ghs_A 58 PASGTAWWFNIL--ERELHELHLASGRKTVHALPF-----------MGSALAKISDS-KQL-IA-SD------DGLFLRD 115 (326)
T ss_dssp TTTTEEEEEEGG--GTEEEEEETTTTEEEEEECSS-----------CEEEEEEEETT-EEE-EE-ET------TEEEEEE
T ss_pred CCCCEEEEEECC--CCEEEEEECCCCcEEEEECCC-----------cceEEEEeCCC-eEE-EE-EC------CCEEEEE
Confidence 334666555433 457899999998766553221 12245566543 222 22 11 2588888
Q ss_pred CCCCCeeeecCCC----CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 186 TSTGKWKEVAAGT----GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 186 s~t~~W~~~~~~~----~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
..++..+...... ..... .-.+.-+|.+|+-............|..+| +.+...+.-... ..-.++..
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~---~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~---~~~~i~~s 187 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSN---DGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS---IPNSICFS 187 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEE---EEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES---SEEEEEEC
T ss_pred CCCCcEEEEeeCCCCCCCCCCC---CEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc---ccCCeEEc
Confidence 8888876553321 11111 122233687654332210001134788899 455554421000 11233333
Q ss_pred -CCe-EEEEEecCCCccCCCCCeEEEEEECCCCCee----EE-EEeec-CCcccceEEeeCCcEEEEEc--CeEEEEeCC
Q 045675 262 -DQS-LALAVYPGLGFRSRLSNRFELWVMNEGKGWT----RT-FNTAF-ERIAWPVGSFRDSKIIMKSV--DQFFLFNPK 331 (382)
Q Consensus 262 -~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~----~~-~~i~~-~~~~~~~~~~~~g~l~l~~~--~~~~~yd~~ 331 (382)
+|+ |+++... ...+.+|.++...++. +. ..++- .....-+.+..+|.|++... +++..||++
T Consensus 188 ~dg~~lyv~~~~--------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 188 PDGTTGYFVDTK--------VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TTSCEEEEEETT--------TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCCCEEEEEECC--------CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 564 6665443 4566666665111211 11 12211 11122244445677888773 489999997
Q ss_pred CCcEEEEeee
Q 045675 332 TKRNFILPID 341 (382)
Q Consensus 332 t~~~~~v~~~ 341 (382)
.+..+.+...
T Consensus 260 g~~~~~i~~~ 269 (326)
T 2ghs_A 260 GNHIARYEVP 269 (326)
T ss_dssp CCEEEEEECS
T ss_pred CCEEEEEECC
Confidence 6666666554
No 170
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=68.21 E-value=1.7 Score=39.48 Aligned_cols=30 Identities=3% Similarity=-0.199 Sum_probs=18.4
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCCc--eeeE
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLE--LFWR 244 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~--~~~~ 244 (382)
.++..+|.+|.-+..+ .|.++|..+. .|+.
T Consensus 4 sP~v~~~~v~~gs~dg-------~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDG-------SLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEETTS-------EEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcCCC-------EEEEEECCCCCEEEEe
Confidence 4566778888766544 8999998764 4543
No 171
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=67.39 E-value=63 Score=28.18 Aligned_cols=187 Identities=11% Similarity=0.009 Sum_probs=91.2
Q ss_pred EEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC--CCeeeecCCC--
Q 045675 123 FVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST--GKWKEVAAGT-- 198 (382)
Q Consensus 123 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t--~~W~~~~~~~-- 198 (382)
++.+|+.|++...+...... ....+.++|..+ +- +.... .......+.+|.... +..+.+....
T Consensus 31 ~~~~d~~~g~~~~~~~~~~~---------~p~~l~~spdg~-~l-~~~~~-~~~~~~~v~~~~~~~~~g~~~~~~~~~~~ 98 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEVA---------NPSYLIPSADGK-FV-YSVNE-FSKDQAAVSAFAFDKEKGTLHLLNTQKTM 98 (361)
T ss_dssp EEEEETTTCCEEEEEEEECS---------CCCSEEECTTSS-EE-EEEEC-CSSTTCEEEEEEEETTTTEEEEEEEEECS
T ss_pred EEEEeCCCCCEEEeecccCC---------CCceEEECCCCC-EE-EEEEc-cCCCCCcEEEEEEeCCCCcEEEeeEeccC
Confidence 44458888887665443111 011355666542 22 22221 111234677776543 5665543321
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCc-eeeEe----CC----CCC--CCCCe-eeEEE-eCCeE
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLE-LFWRT----AM----PEL--PTDCY-VKALS-YDQSL 265 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~-~~~~i----~~----P~~--~~~~~-~~l~~-~~g~L 265 (382)
...+ ..+..+|...+..... ...|..||+.+. ....+ .. |.. ..... ..+.. -+|+.
T Consensus 99 ~~~p-----~~~~~dg~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 99 GADP-----CYLTTNGKNIVTANYS-----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp SSCE-----EEEEECSSEEEEEETT-----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE
T ss_pred CCCc-----EEEEECCCEEEEEECC-----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE
Confidence 1111 2233377755555433 247888888643 22211 11 110 00111 22333 37764
Q ss_pred EEEEecCCCccCCCCCeEEEEEECCCCC------eeEE---EEeecCC--cccceEEeeCCc-EEEEEc-C-eEEEEeCC
Q 045675 266 ALAVYPGLGFRSRLSNRFELWVMNEGKG------WTRT---FNTAFER--IAWPVGSFRDSK-IIMKSV-D-QFFLFNPK 331 (382)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~iW~l~~~~~------W~~~---~~i~~~~--~~~~~~~~~~g~-l~l~~~-~-~~~~yd~~ 331 (382)
.++... ....+.+|.++...+ .... ..+.... -..-+.+..+|. +++... + .+.+||++
T Consensus 169 l~~~~~-------~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 169 LLADDL-------GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp EEEEET-------TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred EEEEeC-------CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 333433 267899999986522 2221 2222221 233456667887 556553 2 89999998
Q ss_pred CCcEEEE
Q 045675 332 TKRNFIL 338 (382)
Q Consensus 332 t~~~~~v 338 (382)
+++++.+
T Consensus 242 ~g~~~~~ 248 (361)
T 3scy_A 242 DGMLDEI 248 (361)
T ss_dssp TTEEEEE
T ss_pred CCceEEe
Confidence 8877655
No 172
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=67.23 E-value=48 Score=28.84 Aligned_cols=93 Identities=8% Similarity=-0.025 Sum_probs=53.6
Q ss_pred cEEEEEECCCceeeEeC-CCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec--CCc
Q 045675 230 KFVVSYDMNLELFWRTA-MPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF--ERI 305 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~-~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~--~~~ 305 (382)
..|..+|+.+.+...+. ..... ....+.. -+|.+.+.+.. ...+.||-+.....- ...+.. ..-
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~--~i~~~~~~pdg~~lasg~~--------dg~i~iwd~~~~~~~--~~~~~~~h~~~ 216 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDV--EYSSGVLHKDSLLLALYSP--------DGILDVYNLSSPDQA--SSRFPVDEEAK 216 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSC--CCCEEEECTTSCEEEEECT--------TSCEEEEESSCTTSC--CEECCCCTTSC
T ss_pred CcEEEEECCCCcEEEEEecCCCC--ceEEEEECCCCCEEEEEcC--------CCEEEEEECCCCCCC--ccEEeccCCCC
Confidence 47888999877664432 22221 1223332 36666655554 678999998876221 122332 222
Q ss_pred ccceEEeeCCcEEEE-EcCeEEEEeCCCCc
Q 045675 306 AWPVGSFRDSKIIMK-SVDQFFLFNPKTKR 334 (382)
Q Consensus 306 ~~~~~~~~~g~l~l~-~~~~~~~yd~~t~~ 334 (382)
+.-+.+..+|..++. .++.+.+||+++.+
T Consensus 217 v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp EEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred EEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 445566667775544 44489999998875
No 173
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=66.67 E-value=63 Score=27.91 Aligned_cols=94 Identities=6% Similarity=-0.068 Sum_probs=54.0
Q ss_pred cEEEEEECCCceeeEe-CCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcc
Q 045675 230 KFVVSYDMNLELFWRT-AMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIA 306 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~ 306 (382)
..|..+|+.+.+-... ..... ....+.. -+|++.+.... ...+.||.+... ..+..+.- ..-+
T Consensus 144 g~v~i~~~~~~~~~~~~~~~~~---~v~~~~~spdg~~lasg~~--------dg~i~iwd~~~~---~~~~~~~~h~~~v 209 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTRGK---FILSIAYSPDGKYLASGAI--------DGIINIFDIATG---KLLHTLEGHAMPI 209 (321)
T ss_dssp SEEEEEETTTCSEEEEEECSSS---CEEEEEECTTSSEEEEEET--------TSCEEEEETTTT---EEEEEECCCSSCC
T ss_pred CcEEEEEcCCCceeEEecCCCc---eEEEEEECCCCCEEEEEcC--------CCeEEEEECCCC---cEEEEEcccCCce
Confidence 4778888876544322 21111 1222332 26666555554 678999988765 34444432 1224
Q ss_pred cceEEeeCCcEEEEEc-C-eEEEEeCCCCcEEE
Q 045675 307 WPVGSFRDSKIIMKSV-D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 307 ~~~~~~~~g~l~l~~~-~-~~~~yd~~t~~~~~ 337 (382)
..+.+..++.+++... + .+.+||+++.+...
T Consensus 210 ~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 210 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp CEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 4566667777665554 3 79999998876543
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=66.51 E-value=65 Score=27.94 Aligned_cols=207 Identities=9% Similarity=-0.003 Sum_probs=98.7
Q ss_pred ccCceEEEeeCCCCceeEEEEccccc--ceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATN--EFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEV 183 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~v 183 (382)
+.+|-|++.+.. ...+.++|+.++ ....+.............. ...++.+|+..+...|.-- .....+.+
T Consensus 99 d~~g~l~v~d~~--~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~-~P~~ia~~~~~g~lyv~d~-----~~~~~I~~ 170 (329)
T 3fvz_A 99 DTDGNYWVTDVA--LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC-QPTDVAVEPSTGAVFVSDG-----YCNSRIVQ 170 (329)
T ss_dssp CTTSCEEEEETT--TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS-SEEEEEECTTTCCEEEEEC-----SSCCEEEE
T ss_pred CCCCCEEEEECC--CCEEEEEeCCCCeEEEEEecccCCCCCCccccC-CCcEEEEeCCCCeEEEEeC-----CCCCeEEE
Confidence 346666665543 457888888665 2333322110000000010 2347888885555444321 12347888
Q ss_pred EECCCCCeeeecCC-CC----eeEEeCCcceEEE--C-ceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCC
Q 045675 184 YSTSTGKWKEVAAG-TG----SCVIYGGQDAVAV--K-GVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDC 254 (382)
Q Consensus 184 yss~t~~W~~~~~~-~~----~~~~~~~~~~v~~--~-G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~ 254 (382)
|+.....-+..... .. .... ....++.+ + |.+|+..... ..|..||+.+.++ ..+..+.... .
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~~~-~ 242 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADREN------GRIQCFKTDTKEFVREIKHASFGR-N 242 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEECCTTTTT-C
T ss_pred EcCCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECCC------CEEEEEECCCCcEEEEEeccccCC-C
Confidence 88543322222211 00 0111 11234444 4 7888776544 5899999986555 4445443321 2
Q ss_pred eeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee--cCCcccc--eEEeeCCcEEEEEcC--eEEEE
Q 045675 255 YVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA--FERIAWP--VGSFRDSKIIMKSVD--QFFLF 328 (382)
Q Consensus 255 ~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~--~~~~~~~--~~~~~~g~l~l~~~~--~~~~y 328 (382)
...+....|.++..... ..........+.+|.+... + .+..+. ...+..| +++..+|.||+.... ++..|
T Consensus 243 ~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g-~--~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSG-E--IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp EEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTC-C--EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred cceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCC-e--EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence 22333334554444432 0111113457777777665 2 333332 1223334 445566767776654 67777
Q ss_pred eCCC
Q 045675 329 NPKT 332 (382)
Q Consensus 329 d~~t 332 (382)
+++.
T Consensus 319 ~~~~ 322 (329)
T 3fvz_A 319 TLTE 322 (329)
T ss_dssp EEEE
T ss_pred eCCc
Confidence 7654
No 175
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.91 E-value=31 Score=34.25 Aligned_cols=137 Identities=7% Similarity=-0.072 Sum_probs=66.7
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
.+|.|.+.+.. ...+.++++.++....+-...... ..++.+|+..+...+. . ......+++++.
T Consensus 463 ~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~~~~---------P~giavDp~~g~ly~t---d--~~~~~~I~~~~~ 526 (699)
T 1n7d_A 463 IHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQGSK---------PRAIVVDPVHGFMYWT---D--WGTPAKIKKGGL 526 (699)
T ss_dssp SSSBCEECCTT--TSCEEEEBSSSCCEEEECCCSSCC---------CCCEECCSSSSCCEEC---C--CSSSCCEEBCCS
T ss_pred eCCcEEEEecc--CCeEEEEecCCCceEEEEeCCCCC---------cceEEEccCCCcEEEc---c--cCCCCeEEEEeC
Confidence 34555554432 456788887766544432221111 1155666654432211 1 111134555554
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEeC
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSYD 262 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~ 262 (382)
....-+.+... .. ....++.+ +|.|||..... ..|.++|+....-+.+ ..+... .....|++.+
T Consensus 527 dG~~~~~l~~~--~l---~~PnGlavd~~~~~LY~aD~~~------~~I~~~d~dG~~~~~~~~~~~~~-~~P~glavd~ 594 (699)
T 1n7d_A 527 NGVDIYSLVTE--NI---QWPNGITLDLLSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRL-AHPFSLAVFE 594 (699)
T ss_dssp SSCCCCEESCS--SC---SSCCCEEECTTTCCEEEEETTT------TEEEEECSSSSCCEEECCCSSSC-SSCCCCEEET
T ss_pred CCCCeeEEEeC--CC---CCccEEEEeccCCEEEEEecCC------CeEEEEccCCCceEEEEecCCcC-CCceEeEEEC
Confidence 43222222111 01 11245555 48999987543 5899999976544444 222111 1334566677
Q ss_pred CeEEEEEec
Q 045675 263 QSLALAVYP 271 (382)
Q Consensus 263 g~L~~~~~~ 271 (382)
+.|+++...
T Consensus 595 ~~lywtd~~ 603 (699)
T 1n7d_A 595 DKVFWTDII 603 (699)
T ss_dssp TEEEEECST
T ss_pred CEEEEEeCC
Confidence 888877654
No 176
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=65.01 E-value=80 Score=28.50 Aligned_cols=169 Identities=15% Similarity=0.164 Sum_probs=85.7
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeee-cCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEV-AAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~-~~~ 197 (382)
...+.|||..+++... +..... ....+.+++ .+ ++... .+..+.+|+..++.-... ...
T Consensus 192 dg~i~vwd~~~~~~~~~~~~h~~----------~v~~l~~~~---~~-l~s~s-----~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTLIHHCE----------AVLHLRFNN---GM-MVTCS-----KDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp TSCEEEEESSSCCEEEEECCCCS----------CEEEEECCT---TE-EEEEE-----TTSCEEEEECSSSSCCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEcCCCC----------cEEEEEEcC---CE-EEEee-----CCCcEEEEeCCCCCCceeeeEe
Confidence 5589999998887543 221111 123444443 22 22222 334788888876542110 000
Q ss_pred CC-eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEEeCCeEEEEEecCCCc
Q 045675 198 TG-SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALSYDQSLALAVYPGLGF 275 (382)
Q Consensus 198 ~~-~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~ 275 (382)
.. ... -.++..+|.....+..+ ..|..+|+.+.+... +.... ........+|.+.+.+..
T Consensus 253 ~~~~~~----v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~----~~v~~~~~~~~~l~~g~~---- 314 (435)
T 1p22_A 253 VGHRAA----VNVVDFDDKYIVSASGD------RTIKVWNTSTCEFVRTLNGHK----RGIACLQYRDRLVVSGSS---- 314 (435)
T ss_dssp CCCSSC----EEEEEEETTEEEEEETT------SEEEEEETTTCCEEEEEECCS----SCEEEEEEETTEEEEEET----
T ss_pred cCCCCc----EEEEEeCCCEEEEEeCC------CeEEEEECCcCcEEEEEcCCC----CcEEEEEeCCCEEEEEeC----
Confidence 00 011 13344466655555443 488999998765433 22211 122223335666665554
Q ss_pred cCCCCCeEEEEEECCCCCeeEEEEeecC-CcccceEEeeCCcE-EEEEcC-eEEEEeCCCCc
Q 045675 276 RSRLSNRFELWVMNEGKGWTRTFNTAFE-RIAWPVGSFRDSKI-IMKSVD-QFFLFNPKTKR 334 (382)
Q Consensus 276 ~~~~~~~~~iW~l~~~~~W~~~~~i~~~-~~~~~~~~~~~g~l-~l~~~~-~~~~yd~~t~~ 334 (382)
...+.+|.+... ..+..+... ....-+.+ ++.. +....+ .+.+||+++++
T Consensus 315 ----dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 315 ----DNTIRLWDIECG---ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ----TSCEEEEETTTC---CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred ----CCeEEEEECCCC---CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 678999998765 334444221 11222222 4554 444444 88999986654
No 177
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=64.92 E-value=75 Score=28.11 Aligned_cols=185 Identities=9% Similarity=0.066 Sum_probs=87.1
Q ss_pred ceeEEEEcccc-----cceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC----
Q 045675 120 GMAFVLWNPAT-----NEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK---- 190 (382)
Q Consensus 120 ~~~~~V~NP~T-----~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~---- 190 (382)
...+.|||..+ +....+..... ....+.+.+..+.+-+.+. .+..+.+|+..++.
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSS----------SVKTVKFNAKQDNVLASGG------NNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSS----------CCCEEEECSSSTTBEEEEC------SSSCEEBCBTTTTSSCTT
T ss_pred CCeEEEeecccccccccchhhccCCcc----------ceEEEEEcCCCCCEEEEEc------CCCeEEEEECCCCccccc
Confidence 45799999877 12333332221 1224666666444443332 23478888887654
Q ss_pred --ee-eecCCCCeeEEeCCcceEEE--C-ceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCC---CCCeeeEEE
Q 045675 191 --WK-EVAAGTGSCVIYGGQDAVAV--K-GVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELP---TDCYVKALS 260 (382)
Q Consensus 191 --W~-~~~~~~~~~~~~~~~~~v~~--~-G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~---~~~~~~l~~ 260 (382)
-. .......+... -.++.+ + +.+...+..+ ..|..+|+.+.+... +..+... ......+..
T Consensus 152 ~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDE---VISLAWNQSLAHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TCCCBCCCCSCCSSCC---CCEEEECSSCTTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred cccccccccccCCCCC---eeEEEeCCCCCcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence 11 11111110000 122222 2 3444443332 478899998765533 3443211 112233333
Q ss_pred e-CC-eEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee--cCCcccceEEee-CCcEEEE-EcC-eEEEEeCCCC
Q 045675 261 Y-DQ-SLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA--FERIAWPVGSFR-DSKIIMK-SVD-QFFLFNPKTK 333 (382)
Q Consensus 261 ~-~g-~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~--~~~~~~~~~~~~-~g~l~l~-~~~-~~~~yd~~t~ 333 (382)
. +| .+.+.... . .....+.+|.+..... ....+. ......-+.+.. ++.+++. ..+ .+.+||++++
T Consensus 223 ~~~~~~~l~~~~~--d---~~~~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 223 HPKNSTRVATATG--S---DNDPSILIWDLRNANT--PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp CSSCTTEEEEEEC--C---SSSCCCCEEETTSTTS--CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred CCCCCCEEEEEEC--C---CCCceEEEEeCCCCCC--CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 3 34 35554443 1 0123899999876421 011111 111133344444 5664444 444 8999999887
Q ss_pred cEE
Q 045675 334 RNF 336 (382)
Q Consensus 334 ~~~ 336 (382)
+..
T Consensus 296 ~~~ 298 (416)
T 2pm9_A 296 EQL 298 (416)
T ss_dssp CEE
T ss_pred ccc
Confidence 643
No 178
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=64.79 E-value=1.1e+02 Score=30.11 Aligned_cols=178 Identities=9% Similarity=-0.020 Sum_probs=91.2
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC-CeeeecCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG-KWKEVAAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~-~W~~~~~~ 197 (382)
...+.|||..+++... +..... ....+.+.|... + ++ ... .+..+.+|+..++ .....-..
T Consensus 76 dg~i~vw~~~~~~~~~~~~~~~~----------~v~~~~~s~~~~-~-l~-~~~----~dg~i~vw~~~~~~~~~~~~~~ 138 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFEAHPD----------YIRSIAVHPTKP-Y-VL-SGS----DDLTVKLWNWENNWALEQTFEG 138 (814)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS----------CEEEEEECSSSS-E-EE-EEE----TTSEEEEEEGGGTSEEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEecCCC----------CEEEEEEeCCCC-E-EE-EEc----CCCEEEEEECCCCceEEEEEcC
Confidence 4589999998887543 322211 133556666432 3 22 222 3457889988765 22211111
Q ss_pred CCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEe---CCeEEEEEec
Q 045675 198 TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSY---DQSLALAVYP 271 (382)
Q Consensus 198 ~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~---~g~L~~~~~~ 271 (382)
.. ... ....+. +|.....+..+ ..|..+|+.+...... ...... ....+... +|.+.++...
T Consensus 139 ~~-~~v---~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 139 HE-HFV---MCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQER--GVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp CS-SCE---EEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECCCTT--CCCEEEECCSTTCCEEEEECT
T ss_pred CC-CcE---EEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecCCCC--CEEEEEEEECCCCCEEEEEeC
Confidence 11 111 122222 35454444433 4788999876543322 222211 11222222 5666555554
Q ss_pred CCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEEE
Q 045675 272 GLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 272 ~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~~ 337 (382)
...+.+|.+... .....+.. ..-...+.+..+|.+++.. .+ .+.+||+.+++...
T Consensus 207 --------dg~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 207 --------DLTIKIWDYQTK---SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp --------TSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred --------CCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 668999988765 33333322 1224445566677755444 34 89999999876544
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.43 E-value=74 Score=27.89 Aligned_cols=199 Identities=8% Similarity=-0.008 Sum_probs=93.2
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCC-CCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQAR-YDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~-~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...++++|..+++...+..... ....+.+.|..+.. ++........ ....+.+++..++.++.+....
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~----------~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 235 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTA----------WLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA 235 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESS----------CEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSCCCEESSCCC
T ss_pred cceEEEEECCCCcEEeeccCCc----------ccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCCceeEeeccC
Confidence 4578899999888766653221 12234455522222 2222221110 1246778888777776654421
Q ss_pred -CeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEe-CCeEEEEEecCC-
Q 045675 199 -GSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSY-DQSLALAVYPGL- 273 (382)
Q Consensus 199 -~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~g~L~~~~~~~~- 273 (382)
..... .....-+|. +++....... ....|..+|+.+.+...+ ..|. .. ....- +|++.++.....
T Consensus 236 ~~~~~~---~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 236 EGESCT---HEFWIPDGSAMAYVSYFKGQ--TDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp TTEEEE---EEEECTTSSCEEEEEEETTT--CCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC-
T ss_pred CCcccc---ceEECCCCCEEEEEecCCCC--ccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcc
Confidence 11111 122233565 6666544311 123599999988776655 3442 11 12233 787665543200
Q ss_pred ----C---ccCCCCCeEEEEEECCCCCeeEEEEeecCC---------cccceEEeeCCc-EEEEEcC----eEEEEeCCC
Q 045675 274 ----G---FRSRLSNRFELWVMNEGKGWTRTFNTAFER---------IAWPVGSFRDSK-IIMKSVD----QFFLFNPKT 332 (382)
Q Consensus 274 ----~---~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~---------~~~~~~~~~~g~-l~l~~~~----~~~~yd~~t 332 (382)
. ........+.+|.++.. ....+..-.... ......+..+|+ |++.... .++.+|+.+
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAK-SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPE 384 (396)
T ss_dssp ---------CCCCCCEEEEEETTTT-BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCT
T ss_pred eeeccccccccCCCCcEEEEecccC-ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcc
Confidence 0 00001345555555443 233332211100 012234455676 6666543 789999988
Q ss_pred CcEEEEee
Q 045675 333 KRNFILPI 340 (382)
Q Consensus 333 ~~~~~v~~ 340 (382)
++...+..
T Consensus 385 ~~~~~~~~ 392 (396)
T 3c5m_A 385 SYKHLEHH 392 (396)
T ss_dssp TCC-----
T ss_pred cccccccc
Confidence 88776643
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=64.24 E-value=1e+02 Score=29.57 Aligned_cols=190 Identities=9% Similarity=-0.010 Sum_probs=96.1
Q ss_pred eeEEEEcccc------cceeccC-CCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCC--CCCEEEEEECC-CCC
Q 045675 121 MAFVLWNPAT------NEFKGLP-TPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQAR--YDAIAEVYSTS-TGK 190 (382)
Q Consensus 121 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~--~~~~~~vyss~-t~~ 190 (382)
..++++|..+ ++...|. .... ......+.|++ ++-++.-...... ....+.+++.. ++.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR----------FVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS----------EECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC----------cccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 5799999998 7777665 3221 12234455543 3322222211100 12478888888 563
Q ss_pred e---eeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCC--C---eeeEEEe
Q 045675 191 W---KEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTD--C---YVKALSY 261 (382)
Q Consensus 191 W---~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~--~---~~~l~~~ 261 (382)
+ +.+......... .....-+|.+|+....+. ...|..+|+.+.++..+ ........ . ...+...
T Consensus 230 ~~~~~~l~~~~~~~~~---~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~ 302 (662)
T 3azo_A 230 FADTRTLLGGPEEAIA---QAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL 302 (662)
T ss_dssp EEEEEEEEEETTBCEE---EEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC
T ss_pred ccccEEeCCCCCceEc---ceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEe
Confidence 3 332211111111 112223788888776542 34799999988777665 22111110 0 1223333
Q ss_pred -CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC-cccceEEeeCCcEEEEEcC-----eEEEEeCCCCc
Q 045675 262 -DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER-IAWPVGSFRDSKIIMKSVD-----QFFLFNPKTKR 334 (382)
Q Consensus 262 -~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~g~l~l~~~~-----~~~~yd~~t~~ 334 (382)
+|++.+.. . . ....||.++-..+ +...+.... ....+...+++.+++.... .++.+|+++++
T Consensus 303 ~~~~~~~~~-~-------~-~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 303 ANGLIAVVH-G-------K-GAAVLGILDPESG--ELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp TTSCEEEEE-B-------S-SSCEEEEEETTTT--EEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCEEEEEE-E-------c-CccEEEEEECCCC--cEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 66655433 2 3 5678898874323 123332211 1223312233445555432 78999999998
Q ss_pred EEEEe
Q 045675 335 NFILP 339 (382)
Q Consensus 335 ~~~v~ 339 (382)
.+.+.
T Consensus 372 ~~~l~ 376 (662)
T 3azo_A 372 ARTIG 376 (662)
T ss_dssp EEEEE
T ss_pred eEEee
Confidence 88773
No 181
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=64.02 E-value=67 Score=27.27 Aligned_cols=97 Identities=10% Similarity=0.009 Sum_probs=53.7
Q ss_pred cEEEEEECCCceee-EeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC---
Q 045675 230 KFVVSYDMNLELFW-RTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER--- 304 (382)
Q Consensus 230 ~~i~~fD~~~~~~~-~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~--- 304 (382)
..|..+|+.+.+.. .+..+.... ....+.. -+|+..++... ....+.+|.+... ..+..++...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~-------~~~~v~~~d~~~~---~~~~~~~~~~~~~ 79 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGP-TPMVPMVAPGGRIAYATVN-------KSESLVKIDLVTG---ETLGRIDLSTPEE 79 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTT-CCCCEEECTTSSEEEEEET-------TTTEEEEEETTTC---CEEEEEECCBTTE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCC-CccceEEcCCCCEEEEEeC-------CCCeEEEEECCCC---CeEeeEEcCCccc
Confidence 47888999876553 345554110 0122332 35644333333 2567888877654 2333343322
Q ss_pred ---cccceEEeeCCc-EEEEE-------------cCeEEEEeCCCCcEEE
Q 045675 305 ---IAWPVGSFRDSK-IIMKS-------------VDQFFLFNPKTKRNFI 337 (382)
Q Consensus 305 ---~~~~~~~~~~g~-l~l~~-------------~~~~~~yd~~t~~~~~ 337 (382)
-...+.+..+|+ |++.. +..+..||+++++...
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 234466666776 55553 2489999999887543
No 182
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=63.25 E-value=65 Score=26.82 Aligned_cols=159 Identities=10% Similarity=0.001 Sum_probs=81.6
Q ss_pred eccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+..+|.|.+.+.. ...+.++++.......+-..... ...++.+|+..+...+.-. ......+.++
T Consensus 87 d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~~~---------~P~~i~vd~~~g~lyv~~~----~~~~~~I~~~ 151 (267)
T 1npe_A 87 DHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTGLV---------NPRGIVTDPVRGNLYWTDW----NRDNPKIETS 151 (267)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCS---------SEEEEEEETTTTEEEEEEC----CSSSCEEEEE
T ss_pred EecCCeEEEEECC--CCEEEEEEcCCCCEEEEEECCCC---------CccEEEEeeCCCEEEEEEC----CCCCcEEEEE
Confidence 3446777666553 45777888765433332111111 1237788886554333221 1123467777
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
+.....-+......... ..++.+ +|.+||..... ..|.+||+.+..-..+. +.. .....+...
T Consensus 152 ~~dg~~~~~~~~~~~~~-----P~gia~d~~~~~lyv~d~~~------~~I~~~~~~g~~~~~~~-~~~--~~P~gi~~d 217 (267)
T 1npe_A 152 HMDGTNRRILAQDNLGL-----PNGLTFDAFSSQLCWVDAGT------HRAECLNPAQPGRRKVL-EGL--QYPFAVTSY 217 (267)
T ss_dssp ETTSCCCEEEECTTCSC-----EEEEEEETTTTEEEEEETTT------TEEEEEETTEEEEEEEE-ECC--CSEEEEEEE
T ss_pred ecCCCCcEEEEECCCCC-----CcEEEEcCCCCEEEEEECCC------CEEEEEecCCCceEEEe-cCC--CCceEEEEe
Confidence 76543322221111111 133333 46899987654 58999999865433331 111 133456666
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE 303 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~ 303 (382)
+|.|+++... ...+ ++++.. ....+..|+..
T Consensus 218 ~~~lyva~~~--------~~~v--~~~d~~-~g~~~~~i~~g 248 (267)
T 1npe_A 218 GKNLYYTDWK--------TNSV--IAMDLA-ISKEMDTFHPH 248 (267)
T ss_dssp TTEEEEEETT--------TTEE--EEEETT-TTEEEEEECCS
T ss_pred CCEEEEEECC--------CCeE--EEEeCC-CCCceEEEccc
Confidence 8888887664 3444 455443 23556666543
No 183
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=62.75 E-value=15 Score=27.11 Aligned_cols=44 Identities=11% Similarity=0.100 Sum_probs=30.9
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEe
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVN 172 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~ 172 (382)
..++.+||.|++|...-...... ..+.+..|...+.|+|++..-
T Consensus 11 A~V~~~d~~~~~W~p~~~g~~gv--------s~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 11 ATVMLYDDGNKRWLPAGTGPQAF--------SRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp EECBEECTTTSSCCBSSCSCCCC--------EEEEEEEETTTTEEEEEEEES
T ss_pred EEEEEEcCCCCceeECCCCCCCc--------cEEEEEEeCCCCEEEEEEEEc
Confidence 46889999999986333211110 356788899899999998763
No 184
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=61.96 E-value=20 Score=26.66 Aligned_cols=40 Identities=13% Similarity=0.294 Sum_probs=29.9
Q ss_pred eeEEEEccccc-ceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEE
Q 045675 121 MAFVLWNPATN-EFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIV 171 (382)
Q Consensus 121 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 171 (382)
..++.+||.|+ +|+..-... ..+.+-+|+..+.|+|+++.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~-----------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc-----------eEEEEEEcCCCCEEEEEEcc
Confidence 47899999996 997544322 25567789888899999864
No 185
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=60.43 E-value=77 Score=26.78 Aligned_cols=96 Identities=8% Similarity=0.104 Sum_probs=54.4
Q ss_pred cEEEEEECCCc--eeeEe-CCCCCCCCCeeeEEEe---CCeEEEEEecCCCccCCCCCeEEEEEECCCC----C--eeEE
Q 045675 230 KFVVSYDMNLE--LFWRT-AMPELPTDCYVKALSY---DQSLALAVYPGLGFRSRLSNRFELWVMNEGK----G--WTRT 297 (382)
Q Consensus 230 ~~i~~fD~~~~--~~~~i-~~P~~~~~~~~~l~~~---~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~----~--W~~~ 297 (382)
..|..+|+.++ .+..+ .+.... .....+... +|.+.+.... ...+.||.++... + |...
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~d~~~l~s~~~--------dg~v~vwd~~~~~~~~~~~~~~~~ 103 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHD-SSIVAIDWASPEYGRIIASASY--------DKTVKLWEEDPDQEECSGRRWNKL 103 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCS-SCEEEEEECCGGGCSEEEEEET--------TSCEEEEEECTTSCTTSSCSEEEE
T ss_pred CeEEEEECCCCCCcceecceeccCC-CcEEEEEEcCCCCCCEEEEEcC--------CCeEEEEecCCCcccccccCccee
Confidence 47778888754 22222 111111 122333333 3666666654 6789999998642 1 7777
Q ss_pred EEeec-CCcccceEEeeC--CcEEE-EEcC-eEEEEeCCCCc
Q 045675 298 FNTAF-ERIAWPVGSFRD--SKIIM-KSVD-QFFLFNPKTKR 334 (382)
Q Consensus 298 ~~i~~-~~~~~~~~~~~~--g~l~l-~~~~-~~~~yd~~t~~ 334 (382)
..+.. ......+.+..+ +..++ ...+ .+.+||+++++
T Consensus 104 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 104 CTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred eeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 76642 222444555555 66544 4444 89999998775
No 186
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=60.37 E-value=1e+02 Score=28.03 Aligned_cols=97 Identities=10% Similarity=0.013 Sum_probs=50.9
Q ss_pred cEEEEEECCCceeeE--eCCCCCCCCCeeeEE-EeC---CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC
Q 045675 230 KFVVSYDMNLELFWR--TAMPELPTDCYVKAL-SYD---QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE 303 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~--i~~P~~~~~~~~~l~-~~~---g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~ 303 (382)
..|..+|+.+..... +............+. .-+ |++.+.... ...+.||.+... .-.......-.
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--------d~~i~vwd~~~~-~~~~~~~~~h~ 241 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--------DEHIKISHYPQC-FIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--------TSCEEEEEESCT-TCEEEECCCCS
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--------CCcEEEEECCCC-ceeeeeecCCC
Confidence 368888887654331 101110111222333 235 666655554 678999999865 21111111112
Q ss_pred CcccceEEeeCCcEEEE-EcC-eEEEEeCCCCcEE
Q 045675 304 RIAWPVGSFRDSKIIMK-SVD-QFFLFNPKTKRNF 336 (382)
Q Consensus 304 ~~~~~~~~~~~g~l~l~-~~~-~~~~yd~~t~~~~ 336 (382)
.....+.+. +|..++. ..+ .+.+||+++++..
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 224445556 6765544 444 8999999998743
No 187
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=60.28 E-value=80 Score=26.89 Aligned_cols=127 Identities=14% Similarity=0.254 Sum_probs=58.2
Q ss_pred CEEEEEECC-CCCeeeecCCCCeeEEeCCcceEEE-CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCee
Q 045675 179 AIAEVYSTS-TGKWKEVAAGTGSCVIYGGQDAVAV-KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYV 256 (382)
Q Consensus 179 ~~~~vyss~-t~~W~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~ 256 (382)
..+..|+.. .-.|+...... .. ...+.. +|.+|. +..+ ..|.+||...+.......+... ..
T Consensus 117 ~~l~~~d~~g~~~~~~~~~~~---~~---~~~~~~~~g~l~v-gt~~------~~l~~~d~~g~~~~~~~~~~~~---~~ 180 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTKKA---IY---ATPIVSEDGTIYV-GSND------NYLYAINPDGTEKWRFKTNDAI---TS 180 (330)
T ss_dssp SEEEEECTTSCEEEEEECSSC---CC---SCCEECTTSCEEE-ECTT------SEEEEECTTSCEEEEEECSSCC---CS
T ss_pred CEEEEEcCCCCEEEEEcCCCc---ee---eeeEEcCCCEEEE-EcCC------CEEEEECCCCCEeEEEecCCCc---ee
Confidence 366777766 22565543221 11 122333 566554 4332 3899999984333333433221 12
Q ss_pred eEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCC---eeEEEEeecCCcccceEEeeCCcEEEEEcC-eEEEEeCC
Q 045675 257 KALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG---WTRTFNTAFERIAWPVGSFRDSKIIMKSVD-QFFLFNPK 331 (382)
Q Consensus 257 ~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~---W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~-~~~~yd~~ 331 (382)
.+.. .+|.|++.. . .++.++.. + |.... .. .....+.+..+|.|++...+ .++.||..
T Consensus 181 ~~~~d~~g~l~v~t-~------------~l~~~d~~-g~~~~~~~~--~~-~~~~~~~~~~~g~l~v~t~~~gl~~~~~~ 243 (330)
T 3hxj_A 181 AASIGKDGTIYFGS-D------------KVYAINPD-GTEKWNFYA--GY-WTVTRPAISEDGTIYVTSLDGHLYAINPD 243 (330)
T ss_dssp CCEECTTCCEEEES-S------------SEEEECTT-SCEEEEECC--SS-CCCSCCEECTTSCEEEEETTTEEEEECTT
T ss_pred eeEEcCCCEEEEEe-C------------EEEEECCC-CcEEEEEcc--CC-cceeceEECCCCeEEEEcCCCeEEEECCC
Confidence 2233 356666543 2 23333322 2 43221 11 11333344445566666654 77777765
Q ss_pred CCcEEEE
Q 045675 332 TKRNFIL 338 (382)
Q Consensus 332 t~~~~~v 338 (382)
++.....
T Consensus 244 g~~~~~~ 250 (330)
T 3hxj_A 244 GTEKWRF 250 (330)
T ss_dssp SCEEEEE
T ss_pred CCEeEEe
Confidence 5554433
No 188
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=59.72 E-value=1.4e+02 Score=29.59 Aligned_cols=197 Identities=10% Similarity=0.051 Sum_probs=98.4
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCc--cccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLT--ESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~--~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
.+|-|-+... ...+..++|.+++...+...+.. ....... ...++..|.... . .+.. ....+..|
T Consensus 322 ~~g~lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~v~~i~~d~~g~-l---Wigt----~~~Gl~~~ 388 (781)
T 3v9f_A 322 SFNNIWIGTW---GGGINFISNAPPTFHTWSYSPTQMNESSLSNK--VVSSVCDDGQGK-L---WIGT----DGGGINVF 388 (781)
T ss_dssp SSCCEEEEEB---SSCEEEECSSCCSCEEEC----CCCSSCCSSS--CEEEEEECTTSC-E---EEEE----BSSCEEEE
T ss_pred CCCCEEEEec---CCeEEEeCCCCCcceeeccCccccccCCCCCc--ceEEEEEcCCCC-E---EEEe----CCCcEEEE
Confidence 3555544432 23688889988876665432110 0000011 123444444321 1 1111 12246677
Q ss_pred ECCCCCeeeecCC--CCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE
Q 045675 185 STSTGKWKEVAAG--TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS 260 (382)
Q Consensus 185 ss~t~~W~~~~~~--~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~ 260 (382)
+..++.++..... ...... .+++. +|. .|++... ..|..||..+++++.+..+.........+.+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v----~~i~~d~~g~-lWigt~~------~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 457 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSV----LCSLKDSEGN-LWFGTYL------GNISYYNTRLKKFQIIELEKNELLDVRVFYE 457 (781)
T ss_dssp ETTEEEEECC-----CCCSBE----EEEEECTTSC-EEEEETT------EEEEEECSSSCEEEECCSTTTCCCCEEEEEE
T ss_pred ECCCCeEEEccCCCCCCCcce----EEEEECCCCC-EEEEecc------CCEEEEcCCCCcEEEeccCCCCCCeEEEEEE
Confidence 7776655543211 000111 23333 354 4666542 3799999999999887543111112334444
Q ss_pred e-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeec----CCcccceEEeeCCcEEEEEc-CeEEEEeCCCC
Q 045675 261 Y-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAF----ERIAWPVGSFRDSKIIMKSV-DQFFLFNPKTK 333 (382)
Q Consensus 261 ~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~----~~~~~~~~~~~~g~l~l~~~-~~~~~yd~~t~ 333 (382)
. +|.|.+.... .++.++...+ |......+- ......+....+|.|++... ..++.||++++
T Consensus 458 d~~g~lwigt~~------------Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 458 DKNKKIWIGTHA------------GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp CTTSEEEEEETT------------EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred CCCCCEEEEECC------------ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 4 6777765432 2344433222 655443221 11133344445677999887 59999999999
Q ss_pred cEEEEe
Q 045675 334 RNFILP 339 (382)
Q Consensus 334 ~~~~v~ 339 (382)
+++...
T Consensus 526 ~~~~~~ 531 (781)
T 3v9f_A 526 LVRKFN 531 (781)
T ss_dssp EEEEEC
T ss_pred eEEEcc
Confidence 888764
No 189
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=59.65 E-value=84 Score=26.97 Aligned_cols=186 Identities=9% Similarity=0.012 Sum_probs=86.8
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC----eeeec
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK----WKEVA 195 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~----W~~~~ 195 (382)
...+.+||..+++....-.... ....+.+.+.. .+.+++... .......+.+|+..++. +....
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~----------~v~~~~~~~~~-~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~ 162 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKSPV----------PVKRVEFSPCG-NYFLAILDN-VMKNPGSINIYEIERDSATHELTKVS 162 (369)
T ss_dssp TTEEEEEETTTCCEEEEEECSS----------CEEEEEECTTS-SEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEEC
T ss_pred CCeEEEEECCCCcEEEEeecCC----------CeEEEEEccCC-CEEEEecCC-ccCCCCEEEEEEecCCccceeecccc
Confidence 4579999998877554322221 13356666643 333332211 11223477777766442 22211
Q ss_pred CCCCeeEEeC----CcceE--EECceEEEEeecccccccccEEEEEECCC-cee-eEeCCCCCCCCCeeeEEEe-CCeEE
Q 045675 196 AGTGSCVIYG----GQDAV--AVKGVLHWIANGIGVLVNEKFVVSYDMNL-ELF-WRTAMPELPTDCYVKALSY-DQSLA 266 (382)
Q Consensus 196 ~~~~~~~~~~----~~~~v--~~~G~lywl~~~~~~~~~~~~i~~fD~~~-~~~-~~i~~P~~~~~~~~~l~~~-~g~L~ 266 (382)
.......... .-..+ .-+|.....+..+ ..|..+|+.+ ... ..+..... ....+... +|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l 233 (369)
T 3zwl_B 163 EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD------GKISKYDVSNNYEYVDSIDLHEK---SISDMQFSPDLTYF 233 (369)
T ss_dssp SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT------SEEEEEETTTTTEEEEEEECCSS---CEEEEEECTTSSEE
T ss_pred cceeeeccCCcCccceeEEEEcCCCCEEEEEcCC------CEEEEEECCCCcEeEEEEecCCC---ceeEEEECCCCCEE
Confidence 1111110000 00111 2245544444433 4899999987 332 33332221 22233322 56655
Q ss_pred EEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEE-EcC---------------eEEEEeC
Q 045675 267 LAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMK-SVD---------------QFFLFNP 330 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~-~~~---------------~~~~yd~ 330 (382)
++... ...+.+|.+... ..+..+........+.+..++..++. ..+ .+..||.
T Consensus 234 ~~~~~--------d~~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 234 ITSSR--------DTNSFLVDVSTL---QVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEEET--------TSEEEEEETTTC---CEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EEecC--------CceEEEEECCCC---ceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 55544 568899988765 22333322222333444444443322 211 5788888
Q ss_pred CCCcEEE
Q 045675 331 KTKRNFI 337 (382)
Q Consensus 331 ~t~~~~~ 337 (382)
++++...
T Consensus 303 ~~~~~~~ 309 (369)
T 3zwl_B 303 IFEEEIG 309 (369)
T ss_dssp TTCCEEE
T ss_pred CCCcchh
Confidence 8776543
No 190
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=59.63 E-value=87 Score=27.11 Aligned_cols=197 Identities=10% Similarity=-0.019 Sum_probs=94.3
Q ss_pred eeeeccCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCC-CCCeEEEEEEeecCCCCC
Q 045675 102 KIVGSCNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQD-TNDYVLVRIVNFQARYDA 179 (382)
Q Consensus 102 ~~~~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~ 179 (382)
.+.++.+|.+.+-+. .....++|..+++... +...... ....+.++|. .+.+.+.+- .+.
T Consensus 88 ~~s~s~D~~i~~w~~---~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~s~s------~dg 149 (343)
T 3lrv_A 88 IISRGPCNRLLLLYP---GNQITILDSKTNKVLREIEVDSAN---------EIIYMYGHNEVNTEYFIWAD------NRG 149 (343)
T ss_dssp EEEECSTTEEEEEET---TTEEEEEETTTCCEEEEEECCCSS---------CEEEEECCC---CCEEEEEE------TTC
T ss_pred eEEecCCCeEEEEEc---cCceEEeecCCcceeEEeecCCCC---------CEEEEEcCCCCCCCEEEEEe------CCC
Confidence 344555676666555 3366777777776222 2111111 2345666763 234433222 234
Q ss_pred EEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceee--EeCCCCCCCCCeee
Q 045675 180 IAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW--RTAMPELPTDCYVK 257 (382)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~--~i~~P~~~~~~~~~ 257 (382)
.+.+|+..++.-............ . .-...-+|.+...+..+ ..|..+|+.+.+-. .+..... .....
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i-~-~~~~~pdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~~~h~--~~v~~ 219 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEY-S-SGVLHKDSLLLALYSPD------GILDVYNLSSPDQASSRFPVDEE--AKIKE 219 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCC-C-EEEECTTSCEEEEECTT------SCEEEEESSCTTSCCEECCCCTT--SCEEE
T ss_pred cEEEEECCCCcEEEEEecCCCCce-E-EEEECCCCCEEEEEcCC------CEEEEEECCCCCCCccEEeccCC--CCEEE
Confidence 788999887754322211110001 0 01122256665554433 47889999886643 2332111 12333
Q ss_pred EEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEE----EEeecCCcccceEEeeCCcEEEE-Ec-C-eEEEE
Q 045675 258 ALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRT----FNTAFERIAWPVGSFRDSKIIMK-SV-D-QFFLF 328 (382)
Q Consensus 258 l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~----~~i~~~~~~~~~~~~~~g~l~l~-~~-~-~~~~y 328 (382)
+.-. +|.+.+.... . .+.||-+..... .... +..+... ..+.+..+|..++. .. + .+.+|
T Consensus 220 l~fs~~g~~l~s~~~--------~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 220 VKFADNGYWMVVECD--------Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGT--VTYDIDDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp EEECTTSSEEEEEES--------S-BEEEEETTSSTTCBSSCCCBC-----CC--EEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEeCCCCEEEEEeC--------C-eEEEEEcCCCCcceeecccccccccccc--eEEEECCCCCEEEEecCCCCcEEEE
Confidence 3333 5554444443 3 899999876522 1100 1111111 23666667775555 33 3 56666
Q ss_pred eC--CCCcEEE
Q 045675 329 NP--KTKRNFI 337 (382)
Q Consensus 329 d~--~t~~~~~ 337 (382)
|. ..+.|+.
T Consensus 289 ~~~~~~~~~~~ 299 (343)
T 3lrv_A 289 KFDKKTKNWTK 299 (343)
T ss_dssp EECTTTCSEEE
T ss_pred EEcccccceEe
Confidence 55 5556775
No 191
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=58.46 E-value=72 Score=30.92 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=59.0
Q ss_pred cceEEECceEEEEee-cccccccccEEEEEEC-CC--ceeeEeCCCCCC-------CC-CeeeEEE--eCCe----EEEE
Q 045675 207 QDAVAVKGVLHWIAN-GIGVLVNEKFVVSYDM-NL--ELFWRTAMPELP-------TD-CYVKALS--YDQS----LALA 268 (382)
Q Consensus 207 ~~~v~~~G~lywl~~-~~~~~~~~~~i~~fD~-~~--~~~~~i~~P~~~-------~~-~~~~l~~--~~g~----L~~~ 268 (382)
..++..+|.+|.... .+ .|.++|. .+ +.|+.- .+... .+ ....++. .+|+ |++.
T Consensus 56 ~tP~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~lW~~~-~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~ 127 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN-------NTFALGLDDPGTILWQDK-PKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT 127 (599)
T ss_dssp SCCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEEC-CCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE
T ss_pred eccEEECCEEEEEeCCCC-------EEEEEeCCCCCcEEEEEC-CCCCccccccccccccccceEEEecCCcceeEEEEE
Confidence 366788999999765 33 7999999 55 456542 22110 00 0112344 4665 6554
Q ss_pred EecCCCccCCCCCeEEEEEECCCCC---eeEEEEee-cC-Cc-ccceEEeeCCcEEEEEc-------CeEEEEeCCCCcE
Q 045675 269 VYPGLGFRSRLSNRFELWVMNEGKG---WTRTFNTA-FE-RI-AWPVGSFRDSKIIMKSV-------DQFFLFNPKTKRN 335 (382)
Q Consensus 269 ~~~~~~~~~~~~~~~~iW~l~~~~~---W~~~~~i~-~~-~~-~~~~~~~~~g~l~l~~~-------~~~~~yd~~t~~~ 335 (382)
... . .+..++-..| |.....-. .. .+ ..|+. . ++.||+... ..++.||.+|++.
T Consensus 128 t~d---------g--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 128 QLD---------G--NVAALNAETGETVWKVENSDIKVGSTLTIAPYV-V-KDKVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp CTT---------S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-E-TTEEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred cCC---------C--EEEEEECCCCCEEEeecCCCCCccceeecCCEE-E-CCEEEEEecccccCCCCeEEEEECCCCcE
Confidence 332 2 3445553323 87542110 00 11 33433 3 455666552 3899999999986
Q ss_pred EE
Q 045675 336 FI 337 (382)
Q Consensus 336 ~~ 337 (382)
..
T Consensus 195 ~W 196 (599)
T 1w6s_A 195 VW 196 (599)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 192
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=57.87 E-value=1.2e+02 Score=28.27 Aligned_cols=95 Identities=17% Similarity=0.031 Sum_probs=52.7
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCccc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAW 307 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~ 307 (382)
..|..+|...+....+..... ....+.. -+|++.+.... ...+.||..+. ..+..+.- ..-+.
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~---~v~~~~~spd~~~las~~~--------d~~i~iw~~~~----~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSS---SVRGVAFSPDGQTIASASD--------DKTVKLWNRNG----QLLQTLTGHSSSVR 512 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSS---CEEEEEECTTSCEEEEEET--------TSEEEEEETTS----CEEEEEECCSSCEE
T ss_pred CEEEEEECCCCEEEEEcCCCC---CEEEEEEcCCCCEEEEEeC--------CCEEEEEcCCC----CEEEEEeCCCCCEE
Confidence 467788887665555432221 2223332 36776655554 67899998432 22333321 12244
Q ss_pred ceEEeeCCcEEE-EEcC-eEEEEeCCCCcEEEEe
Q 045675 308 PVGSFRDSKIIM-KSVD-QFFLFNPKTKRNFILP 339 (382)
Q Consensus 308 ~~~~~~~g~l~l-~~~~-~~~~yd~~t~~~~~v~ 339 (382)
-+++..+|.+++ ...+ .+.+||...+....+.
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~ 546 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 546 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEc
Confidence 466667777544 4444 7889997665555443
No 193
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=57.18 E-value=90 Score=26.49 Aligned_cols=158 Identities=11% Similarity=-0.020 Sum_probs=81.4
Q ss_pred EEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEE
Q 045675 154 LGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVV 233 (382)
Q Consensus 154 ~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~ 233 (382)
-|..+++..+...++-+ ....+..|+..++.-+....... .. .-+..-+|. +|++... .|.
T Consensus 16 Egp~w~~~~~~l~~~d~------~~~~i~~~d~~~~~~~~~~~~~~--~~---~i~~~~dG~-l~v~~~~-------~l~ 76 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI------PAKKVCRWDSFTKQVQRVTMDAP--VS---SVALRQSGG-YVATIGT-------KFC 76 (297)
T ss_dssp EEEEEETTTTEEEEEET------TTTEEEEEETTTCCEEEEECSSC--EE---EEEEBTTSS-EEEEETT-------EEE
T ss_pred cCCeEECCCCEEEEEEC------CCCEEEEEECCCCcEEEEeCCCc--eE---EEEECCCCC-EEEEECC-------eEE
Confidence 35666765554333322 23478888888775443322211 11 112223677 5665543 799
Q ss_pred EEECCCceeeEeC-CCCCCCC-CeeeEEE-eCCeEEEEEecCCCccC---CCCCeEEEEEECCCCC-eeEEEEeecCCcc
Q 045675 234 SYDMNLELFWRTA-MPELPTD-CYVKALS-YDQSLALAVYPGLGFRS---RLSNRFELWVMNEGKG-WTRTFNTAFERIA 306 (382)
Q Consensus 234 ~fD~~~~~~~~i~-~P~~~~~-~~~~l~~-~~g~L~~~~~~~~~~~~---~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~ 306 (382)
.||+.+.+++.+. .+..... ..-.+.. -+|+|++.... .... .....-.||.++.. + -..+.. .+ ...
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~--~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~-~~-~~p 151 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMA--EETAPAVLERHQGALYSLFPD-HHVKKYFD-QV-DIS 151 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEE--CCSBTTBCCTTCEEEEEECTT-SCEEEEEE-EE-SBE
T ss_pred EEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCC--cccccccccCCCcEEEEEECC-CCEEEEee-cc-ccc
Confidence 9999999888763 3222111 1222333 37888887654 1100 01345688998865 4 222211 11 112
Q ss_pred cceEEeeCCc-EEEEEcC--eEEEEeC--CCCcE
Q 045675 307 WPVGSFRDSK-IIMKSVD--QFFLFNP--KTKRN 335 (382)
Q Consensus 307 ~~~~~~~~g~-l~l~~~~--~~~~yd~--~t~~~ 335 (382)
.-+++..+|+ +|+.... ++..||+ +++++
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc
Confidence 3355556676 5555532 7777765 56654
No 194
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=55.74 E-value=1.1e+02 Score=27.03 Aligned_cols=74 Identities=5% Similarity=-0.014 Sum_probs=44.2
Q ss_pred CCeEEEEEecCCCccCC--CCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEc-CeEEEEeCCCCcEEEE
Q 045675 262 DQSLALAVYPGLGFRSR--LSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSV-DQFFLFNPKTKRNFIL 338 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~--~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-~~~~~yd~~t~~~~~v 338 (382)
+++|++........+.. ....+.+|-++.. ..+.+++... ..-+.+..+|+.+++.. +.+.+||.++++++.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---QRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLL 340 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---EEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCC---cEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceee
Confidence 46777766520000000 1234555544443 6778888776 66677777888544444 4899999999966666
Q ss_pred e
Q 045675 339 P 339 (382)
Q Consensus 339 ~ 339 (382)
.
T Consensus 341 ~ 341 (361)
T 2oiz_A 341 R 341 (361)
T ss_dssp E
T ss_pred E
Confidence 4
No 195
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=55.74 E-value=1.3e+02 Score=27.75 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=45.4
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCc-EEEEEc---CeEEEEeCCCCcEEE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSK-IIMKSV---DQFFLFNPKTKRNFI 337 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~---~~~~~yd~~t~~~~~ 337 (382)
+++|++..... ..+.+....=+||+++-. .+..+.+|++...-.-+.+..+|. +++... +.|.+||.++.+..+
T Consensus 330 g~rlyVa~~~~-~~gthk~~s~~VsVID~~-T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 330 SDRIYLLVDQR-DEWKHKAASRFVVVLNAE-TGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp GTEEEEEEEEC-CTTCTTSCEEEEEEEETT-TCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCEEEEEeccc-ccccccCCCCEEEEEECC-CCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 46788876541 000111234467888764 467778887654344456667777 555444 299999999998653
No 196
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=54.61 E-value=1.6e+02 Score=28.60 Aligned_cols=141 Identities=15% Similarity=0.116 Sum_probs=63.9
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
+..+.|||..+.....+......+. . ....+.+.+....-.++... .+..+.+++..++.-...-....
T Consensus 493 D~~i~iwd~~~~~~~~~~~~~~~h~----~--~v~~~~~~~~~~~~~l~s~s-----~d~~v~vwd~~~~~~~~~~~~h~ 561 (694)
T 3dm0_A 493 DRTIKLWNTLGECKYTISEGGEGHR----D--WVSCVRFSPNTLQPTIVSAS-----WDKTVKVWNLSNCKLRSTLAGHT 561 (694)
T ss_dssp TSCEEEECTTSCEEEEECSSTTSCS----S--CEEEEEECSCSSSCEEEEEE-----TTSCEEEEETTTCCEEEEECCCS
T ss_pred CCEEEEEECCCCcceeeccCCCCCC----C--cEEEEEEeCCCCcceEEEEe-----CCCeEEEEECCCCcEEEEEcCCC
Confidence 3467777765544333322222111 1 13355666654333333332 23478899887764332111111
Q ss_pred eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCC
Q 045675 200 SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRL 279 (382)
Q Consensus 200 ~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~ 279 (382)
.... .-...-+|.+...++.+ ..|..+|+.+.+-.. .+.... ....+....+...++...
T Consensus 562 ~~v~---~v~~spdg~~l~sg~~D------g~i~iwd~~~~~~~~-~~~~~~--~v~~~~~sp~~~~l~~~~-------- 621 (694)
T 3dm0_A 562 GYVS---TVAVSPDGSLCASGGKD------GVVLLWDLAEGKKLY-SLEANS--VIHALCFSPNRYWLCAAT-------- 621 (694)
T ss_dssp SCEE---EEEECTTSSEEEEEETT------SBCEEEETTTTEEEE-CCBCSS--CEEEEEECSSSSEEEEEE--------
T ss_pred CCEE---EEEEeCCCCEEEEEeCC------CeEEEEECCCCceEE-EecCCC--cEEEEEEcCCCcEEEEEc--------
Confidence 0000 01112246554444433 478889998765322 221111 223333333333333333
Q ss_pred CCeEEEEEECCC
Q 045675 280 SNRFELWVMNEG 291 (382)
Q Consensus 280 ~~~~~iW~l~~~ 291 (382)
...+.||.+...
T Consensus 622 ~~~i~iwd~~~~ 633 (694)
T 3dm0_A 622 EHGIKIWDLESK 633 (694)
T ss_dssp TTEEEEEETTTT
T ss_pred CCCEEEEECCCC
Confidence 345899988765
No 197
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=54.54 E-value=1.2e+02 Score=27.35 Aligned_cols=190 Identities=7% Similarity=-0.003 Sum_probs=95.5
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCC--CCCeEEEEEEeecCCCCCEEEEEECCCCCeeee-cC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQD--TNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEV-AA 196 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~--~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~-~~ 196 (382)
...+++++..+++....+....... .. ....+.+.|. .+.+-+.+ . .+..+.+|+..++.-... -.
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h---~~--~v~~~~~sp~~~~~~~l~s~--~----~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGH---VS--MLTDVHLIKDSDGHQFIITS--D----RDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEEC---SS--CEEEEEEEECTTSCEEEEEE--E----TTSCEEEEEESCTTCEEEECC
T ss_pred CCcEEEEecCCcccccccceeeecc---cC--ceEEEEEcCCCCCCcEEEEE--c----CCCcEEEEECCCCceeeeeec
Confidence 4467888776665442111111100 11 2335566665 12333222 2 234788888877653322 11
Q ss_pred CCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCC----------------------CCCC
Q 045675 197 GTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPE----------------------LPTD 253 (382)
Q Consensus 197 ~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~----------------------~~~~ 253 (382)
....... .-... +|.+...++.+ ..|..+|+.+.+. ..+.... ....
T Consensus 239 ~h~~~v~---~~~~s-d~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (450)
T 2vdu_B 239 GHKHFVS---SICCG-KDYLLLSAGGD------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEF 308 (450)
T ss_dssp CCSSCEE---EEEEC-STTEEEEEESS------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCC
T ss_pred CCCCceE---EEEEC-CCCEEEEEeCC------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceE
Confidence 1111111 11222 67665555433 4899999987654 3333210 0000
Q ss_pred CeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEE--CCCCCeeEEEEeecCCcccceEEeeCCcEEEEEcC-------
Q 045675 254 CYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVM--NEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSVD------- 323 (382)
Q Consensus 254 ~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l--~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~------- 323 (382)
....+.. -+|++.++... ....+.||.+ .....+..+..+.......-+.+.. +.+++....
T Consensus 309 ~v~~i~~~~~~~~l~~~~~-------~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~ 380 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVE-------ATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHN-DEFQVTLDNKESSGVQ 380 (450)
T ss_dssp CEEEEEECSSSSEEEEEET-------TCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEET-TEEEEEECCTTCCSSC
T ss_pred EEEEEEEeCCCCEEEEEEC-------CCCeEEEEEeccCCCCceeeccEeccCCceEEEEecC-CcEEEEEecccCCCCC
Confidence 1222222 25666666663 2789999999 3321267777776543344455554 446655432
Q ss_pred ----eEEEEeCCCCcEEEE
Q 045675 324 ----QFFLFNPKTKRNFIL 338 (382)
Q Consensus 324 ----~~~~yd~~t~~~~~v 338 (382)
.++.++.++++++..
T Consensus 381 ~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 381 KNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp CCSEEEEEEETTTTEEEEC
T ss_pred CcceEEEEEEcCCCeEEEc
Confidence 788888888888644
No 198
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=54.45 E-value=1e+02 Score=26.20 Aligned_cols=178 Identities=11% Similarity=-0.017 Sum_probs=87.3
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.|||..|++... +..... ....+.+.|.. .+-+ ... .+..+.+++..++. .......
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~~----------~v~~~~~~~~~-~~l~-sgs-----~D~~v~lWd~~~~~-~~~~~~~ 137 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHPD----------YIRSIAVHPTK-PYVL-SGS-----DDLTVKLWNWENNW-ALEQTFE 137 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS----------CEEEEEECSSS-SEEE-EEE-----TTSCEEEEEGGGTT-EEEEEEC
T ss_pred CCEEEEEECCCCcEEEEEeCCCC----------cEEEEEEcCCC-CEEE-EEC-----CCCeEEEEECCCCc-chhhhhc
Confidence 5689999998887543 322111 13356666653 2322 211 34578888876541 1111110
Q ss_pred C-eeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEEEe---CCeEEEEEe
Q 045675 199 G-SCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKALSY---DQSLALAVY 270 (382)
Q Consensus 199 ~-~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~~~---~g~L~~~~~ 270 (382)
. .... .++.+ +|.+...+..+ ..|..+|+.+..-... ...... ....+... ++.+.+...
T Consensus 138 ~h~~~v----~~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~s~s 205 (304)
T 2ynn_A 138 GHEHFV----MCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQER--GVNYVDYYPLPDKPYMITAS 205 (304)
T ss_dssp CCCSCE----EEEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEECCCTT--CEEEEEECCSTTCCEEEEEE
T ss_pred ccCCcE----EEEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceeccCCcC--cEEEEEEEEcCCCCEEEEEc
Confidence 0 0011 12222 23333333332 4788889865432211 111111 11112211 444444444
Q ss_pred cCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEEEE
Q 045675 271 PGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 271 ~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~~v 338 (382)
. ...+.||.+... ..+..+.- .....-+.+..++.+++.. .+ .+.+||.++.+..+.
T Consensus 206 ~--------D~~i~iWd~~~~---~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 206 D--------DLTIKIWDYQTK---SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp T--------TSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred C--------CCeEEEEeCCCC---ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 3 678999988765 34444432 1123345556667655544 34 899999999876543
No 199
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=53.68 E-value=1.2e+02 Score=26.85 Aligned_cols=93 Identities=9% Similarity=0.032 Sum_probs=50.7
Q ss_pred cEEEEEECCCce--eeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEE------EEe
Q 045675 230 KFVVSYDMNLEL--FWRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRT------FNT 300 (382)
Q Consensus 230 ~~i~~fD~~~~~--~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~------~~i 300 (382)
..|..+|+.+.. ...+...... ....+...+|++.+.... ...+.+|.+..... .... ...
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~l~s~~~--------d~~v~iw~~~~~~~~~~~~~~~~~~~~~ 382 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGT--PINNVYFAAGALFVSSGF--------DTSIKLDIISDPESERPAIEFETPTFLV 382 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTS--CEEEEEEETTEEEEEETT--------TEEEEEEEECCTTCCSCEECTTSCEEEC
T ss_pred CeEEEEEcCCCcCchhhhhccCCC--CceEEEeCCCCEEEEecC--------CccEEEEeccCCCCCccceeccCccEEc
Confidence 489999998753 2333321211 233344557876555443 67899999987422 1111 111
Q ss_pred ecCCcccceEEeeCCc----EEEEEcC-eEEEEeCCC
Q 045675 301 AFERIAWPVGSFRDSK----IIMKSVD-QFFLFNPKT 332 (382)
Q Consensus 301 ~~~~~~~~~~~~~~g~----l~l~~~~-~~~~yd~~t 332 (382)
........+++..++. |+.+..+ .+..|+++.
T Consensus 383 ~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 383 SNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 1112244455555555 6666555 788888764
No 200
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=53.49 E-value=1e+02 Score=26.11 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=56.7
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWP 308 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~ 308 (382)
..|..+|+.+.+.......... ....+.. -+|++.+.... ...+.+|.+... ..+..+........
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~--------Dg~i~iwd~~~~---~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASGGK--------DGQAMLWDLNEG---KHLYTLDGGDIINA 261 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEET--------TCEEEEEETTTT---EEEEEEECSSCEEE
T ss_pred CEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEEeC--------CCeEEEEEeccC---ceeeeecCCceEEe
Confidence 4678889888765443222111 2223332 36776665554 678999987765 44555544443445
Q ss_pred eEEeeCCcEEEEEcC-eEEEEeCCCCcEE
Q 045675 309 VGSFRDSKIIMKSVD-QFFLFNPKTKRNF 336 (382)
Q Consensus 309 ~~~~~~g~l~l~~~~-~~~~yd~~t~~~~ 336 (382)
+.+..++.++....+ .+.+||++++...
T Consensus 262 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 262 LCFSPNRYWLCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred eecCCCCceeeccCCCEEEEEECCCCeEE
Confidence 555566666665555 8999999887643
No 201
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=52.60 E-value=1.2e+02 Score=26.43 Aligned_cols=68 Identities=4% Similarity=-0.128 Sum_probs=37.5
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecC-CcccceEEeeCCcEEEEEcC-eEEEEeCCCCcEEE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFE-RIAWPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~-~~~~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~ 337 (382)
+|++.+.... ...+.||.+..... ...+..+... ....-+.+..+|.++....+ .++.|+...+.++.
T Consensus 216 ~~~~l~~~~~--------d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (377)
T 3dwl_C 216 SGNALAYAGH--------DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAH 286 (377)
T ss_dssp TSSCEEEEET--------TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CC
T ss_pred CCCEEEEEeC--------CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEE
Confidence 5665444443 67899999987632 3323333221 12445666678886666655 77788887555443
No 202
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=52.20 E-value=1.1e+02 Score=25.88 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=32.6
Q ss_pred CCeEEEEEECCCCC-eeEEEEeec-CCcccceEEeeCC---cEEEEE-cC-eEEEEeCCCC
Q 045675 280 SNRFELWVMNEGKG-WTRTFNTAF-ERIAWPVGSFRDS---KIIMKS-VD-QFFLFNPKTK 333 (382)
Q Consensus 280 ~~~~~iW~l~~~~~-W~~~~~i~~-~~~~~~~~~~~~g---~l~l~~-~~-~~~~yd~~t~ 333 (382)
...+.||.++.... |.....+.- ...+.-+.+..++ .++... .+ .+.+||+++.
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 67899999876533 766665532 1224445555553 444333 34 7888888764
No 203
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=52.14 E-value=1.3e+02 Score=26.73 Aligned_cols=193 Identities=10% Similarity=0.118 Sum_probs=92.8
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
.+|-.++.... ...+.|||..+++....-.... . ....+.+.|... + ++... .+..+.+++.
T Consensus 133 ~dg~~l~s~~~--d~~i~iwd~~~~~~~~~~~~h~------~---~v~~~~~~p~~~-~-l~s~s-----~d~~v~iwd~ 194 (393)
T 1erj_A 133 PDGKFLATGAE--DRLIRIWDIENRKIVMILQGHE------Q---DIYSLDYFPSGD-K-LVSGS-----GDRTVRIWDL 194 (393)
T ss_dssp TTSSEEEEEET--TSCEEEEETTTTEEEEEECCCS------S---CEEEEEECTTSS-E-EEEEE-----TTSEEEEEET
T ss_pred CCCCEEEEEcC--CCeEEEEECCCCcEEEEEccCC------C---CEEEEEEcCCCC-E-EEEec-----CCCcEEEEEC
Confidence 35544443332 5689999998887543211111 1 233566766543 3 22221 3458899998
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEE-E-CceEEEEeecccccccccEEEEEECCCceee-EeCCCCC----CCCCeeeEE
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVA-V-KGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPEL----PTDCYVKAL 259 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~-~-~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~----~~~~~~~l~ 259 (382)
.++.-...-..... . ..... - +|.+...+..+ ..|..+|+.+.... .+..+.. .......+.
T Consensus 195 ~~~~~~~~~~~~~~--v---~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 195 RTGQCSLTLSIEDG--V---TTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp TTTEEEEEEECSSC--E---EEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred CCCeeEEEEEcCCC--c---EEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 87654322111110 0 01111 1 45555544433 46888999876543 2222211 111222333
Q ss_pred Ee-CCeEEEEEecCCCccCCCCCeEEEEEECCCCC---------eeEEEEe-ecCCcccceEEeeCCcEEEEE-cC-eEE
Q 045675 260 SY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG---------WTRTFNT-AFERIAWPVGSFRDSKIIMKS-VD-QFF 326 (382)
Q Consensus 260 ~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~---------W~~~~~i-~~~~~~~~~~~~~~g~l~l~~-~~-~~~ 326 (382)
.. +|++.+.... ...+.+|.+..... ......+ .-......+.+..++..++.. .+ .+.
T Consensus 264 ~~~~g~~l~s~s~--------d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 335 (393)
T 1erj_A 264 FTRDGQSVVSGSL--------DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 335 (393)
T ss_dssp ECTTSSEEEEEET--------TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEE
T ss_pred ECCCCCEEEEEeC--------CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 32 5665555443 67899999875311 1111111 111123344555566644443 44 899
Q ss_pred EEeCCCCcEE
Q 045675 327 LFNPKTKRNF 336 (382)
Q Consensus 327 ~yd~~t~~~~ 336 (382)
+||.++++..
T Consensus 336 iwd~~~~~~~ 345 (393)
T 1erj_A 336 FWDKKSGNPL 345 (393)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCeEE
Confidence 9999988744
No 204
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=52.03 E-value=1.3e+02 Score=26.68 Aligned_cols=184 Identities=15% Similarity=0.110 Sum_probs=92.3
Q ss_pred ceeEEEEccccc-ce-eccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCC
Q 045675 120 GMAFVLWNPATN-EF-KGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAG 197 (382)
Q Consensus 120 ~~~~~V~NP~T~-~~-~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~ 197 (382)
...+.|||.... +. ..++.... +. . ....+.+.|..+.+-+.+- .+..+.+|+..++........
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~-h~----~--~V~~~~~~p~~~~~l~s~s------~dg~v~vw~~~~~~~~~~~~~ 122 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCG-HT----A--PVLDIAWCPHNDNVIASGS------EDCTVMVWEIPDGGLVLPLRE 122 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCC-CS----S--CEEEEEECTTCTTEEEEEE------TTSEEEEEECCTTCCSSCBCS
T ss_pred CCEEEEEECccCCCCCCCCceEec-CC----C--CEEEEEeCCCCCCEEEEEe------CCCeEEEEEccCCCCccccCC
Confidence 457899987443 22 11222111 11 1 2456777775555444432 335899999988754221111
Q ss_pred CCeeEEeCCc---ceEEE--Cc-eEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEe
Q 045675 198 TGSCVIYGGQ---DAVAV--KG-VLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQSLALAVY 270 (382)
Q Consensus 198 ~~~~~~~~~~---~~v~~--~G-~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~ 270 (382)
+..... +.. ..+.+ +| .+...++.+ ..|..+|+.+.+................+... +|.+.+...
T Consensus 123 ~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 123 PVITLE-GHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSEEEE-CCSSCEEEEEECSSBTTEEEEEETT------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred ceEEec-CCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 110000 100 12222 34 244433332 47889999887654332101111123333333 666666555
Q ss_pred cCCCccCCCCCeEEEEEECCCCCeeEEEEe-ec-CCc-ccceEEeeCCcEEEEE----cC-eEEEEeCCCCc
Q 045675 271 PGLGFRSRLSNRFELWVMNEGKGWTRTFNT-AF-ERI-AWPVGSFRDSKIIMKS----VD-QFFLFNPKTKR 334 (382)
Q Consensus 271 ~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i-~~-~~~-~~~~~~~~~g~l~l~~----~~-~~~~yd~~t~~ 334 (382)
. ...+.||.+... ..+..+ .. ... ..-+.+..++.++... .+ .+.+||+++.+
T Consensus 196 ~--------d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 196 R--------DKRVRVIEPRKG---TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp T--------TSEEEEEETTTT---EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred c--------CCcEEEEeCCCC---ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 4 678999998775 333443 11 111 2334455677766655 33 89999998865
No 205
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=51.71 E-value=32 Score=27.19 Aligned_cols=40 Identities=13% Similarity=0.294 Sum_probs=29.4
Q ss_pred eeEEEEccccc-ceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEE
Q 045675 121 MAFVLWNPATN-EFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIV 171 (382)
Q Consensus 121 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 171 (382)
..++++||.|+ +|+..-... ..+.+-+|...+.|+|+++.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~-----------~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC-----------eEEEEEEcCCCCEEEEEEcc
Confidence 47999999997 897543322 24456689888899999864
No 206
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=51.41 E-value=1.2e+02 Score=26.27 Aligned_cols=141 Identities=12% Similarity=0.043 Sum_probs=72.7
Q ss_pred CCEEEEEECCCCCeeeecCC-CC-eeEEeCCcceEE--ECceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCC
Q 045675 178 DAIAEVYSTSTGKWKEVAAG-TG-SCVIYGGQDAVA--VKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPT 252 (382)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~-~~-~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~ 252 (382)
+..+.+++..++.|...... .. .... .++. -+|.+...+..+ ..|..+|..++.+..+ .+....
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h~~~v----~~~~~sp~g~~l~s~s~D------~~v~iw~~~~~~~~~~~~~~~h~- 105 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGHQRTV----RKVAWSPCGNYLASASFD------ATTCIWKKNQDDFECVTTLEGHE- 105 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSCSSCE----EEEEECTTSSEEEEEETT------SCEEEEEECCC-EEEEEEECCCS-
T ss_pred CCeEEEEEcCCCcceeeeeeccccCCcE----EEEEECCCCCEEEEEECC------CcEEEEEccCCCeEEEEEccCCC-
Confidence 34788888888877532211 11 0011 1121 145544443333 3567778777665443 222111
Q ss_pred CCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEE-EEcC-eEEEE
Q 045675 253 DCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIM-KSVD-QFFLF 328 (382)
Q Consensus 253 ~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l-~~~~-~~~~y 328 (382)
.....+... +|.+.+.... ...+.||.++....+..+..+.. ..-+..+.+..++.+++ ...+ .+..|
T Consensus 106 ~~v~~v~~sp~~~~l~s~s~--------D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 106 NEVKSVAWAPSGNLLATCSR--------DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp SCEEEEEECTTSSEEEEEET--------TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred CCceEEEEeCCCCEEEEEEC--------CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 122333332 5666555554 67899999987633554444422 12234455556676444 4444 78888
Q ss_pred eCCCCcEEE
Q 045675 329 NPKTKRNFI 337 (382)
Q Consensus 329 d~~t~~~~~ 337 (382)
|.+++.+..
T Consensus 178 ~~~~~~~~~ 186 (345)
T 3fm0_A 178 REEEDDWVC 186 (345)
T ss_dssp EEETTEEEE
T ss_pred EecCCCEEE
Confidence 888776553
No 207
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=51.01 E-value=1.3e+02 Score=26.35 Aligned_cols=153 Identities=9% Similarity=-0.002 Sum_probs=82.4
Q ss_pred EEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCC-CCeeEEeCCcceEEE--CceEEEEeecccccccc
Q 045675 153 SLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAG-TGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNE 229 (382)
Q Consensus 153 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~-~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~ 229 (382)
...+.+.+....+-+.+-. +..+.+|+..++.....-.. ...... ....+. +|.+...+..+
T Consensus 76 v~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~~l~s~~~d------ 140 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSK------GGDIILWDYDVQNKTSFIQGMGPGDAI---TGMKFNQFNTNQLFVSSIR------ 140 (383)
T ss_dssp EEEEEECSSCTTEEEEEEB------TSCEEEEETTSTTCEEEECCCSTTCBE---EEEEEETTEEEEEEEEETT------
T ss_pred EEEEEECCCCCCEEEEEcC------CCeEEEEeCCCcccceeeecCCcCCce---eEEEeCCCCCCEEEEEeCC------
Confidence 3456677765455444432 34799999998776554332 111111 122222 33444433332
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCccc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAW 307 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~ 307 (382)
..|..+|+.++....+............+.. -+|.+.+.... ...+.+|.+... .+..+.. .....
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~----~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS--------TGRLLLLGLDGH----EIFKEKLHKAKVT 208 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET--------TSEEEEEETTSC----EEEEEECSSSCEE
T ss_pred CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC--------CCCEEEEECCCC----EEEEeccCCCcEE
Confidence 4889999998877776544332222333332 35665555554 678999998422 2233321 22244
Q ss_pred ceEEeeCCc-EEEEE-cC-eEEEEeCCC
Q 045675 308 PVGSFRDSK-IIMKS-VD-QFFLFNPKT 332 (382)
Q Consensus 308 ~~~~~~~g~-l~l~~-~~-~~~~yd~~t 332 (382)
.+.+..++. +++.. .+ .+.+||+++
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 455566666 55444 34 888999987
No 208
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=50.73 E-value=98 Score=26.40 Aligned_cols=65 Identities=8% Similarity=-0.003 Sum_probs=40.0
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC--cccceEEeeCCc-EEEEEcC--eEEEEeCCCCcEE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER--IAWPVGSFRDSK-IIMKSVD--QFFLFNPKTKRNF 336 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~--~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t~~~~ 336 (382)
++++++.... ...+.+|-++.. ..+..++... -...+.+..+|+ +++.... .+..||+++++..
T Consensus 10 ~~~~~v~~~~--------~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNY--------PNNLHVVDVASD---TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEET--------TTEEEEEETTTT---EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCC--------CCeEEEEECCCC---cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 5566665554 677888877654 3334444433 233455566776 5555543 8999999988755
Q ss_pred E
Q 045675 337 I 337 (382)
Q Consensus 337 ~ 337 (382)
.
T Consensus 79 ~ 79 (349)
T 1jmx_B 79 F 79 (349)
T ss_dssp E
T ss_pred E
Confidence 3
No 209
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=50.41 E-value=1.2e+02 Score=26.10 Aligned_cols=93 Identities=8% Similarity=-0.019 Sum_probs=48.3
Q ss_pred cEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccc
Q 045675 230 KFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWP 308 (382)
Q Consensus 230 ~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~ 308 (382)
..|..+|...+.-..+..... ....+.. -+|++.+.... ...+.||.+..... ....+.......-
T Consensus 194 ~~i~iwd~~~~~~~~~~~h~~---~v~~~~~s~~g~~l~sgs~--------dg~v~iwd~~~~~~--~~~~~~~~~~v~~ 260 (343)
T 2xzm_R 194 GRLKVWNTNFQIRYTFKAHES---NVNHLSISPNGKYIATGGK--------DKKLLIWDILNLTY--PQREFDAGSTINQ 260 (343)
T ss_dssp SEEEEEETTTEEEEEEECCSS---CEEEEEECTTSSEEEEEET--------TCEEEEEESSCCSS--CSEEEECSSCEEE
T ss_pred CEEEEEcCCCceeEEEcCccc---cceEEEECCCCCEEEEEcC--------CCeEEEEECCCCcc--cceeecCCCcEEE
Confidence 477778854433322221111 2223332 26666555544 67899999854311 1111211222444
Q ss_pred eEEeeCCcEEEEEcC-eEEEEeCCCCcE
Q 045675 309 VGSFRDSKIIMKSVD-QFFLFNPKTKRN 335 (382)
Q Consensus 309 ~~~~~~g~l~l~~~~-~~~~yd~~t~~~ 335 (382)
+.+..++.++....+ .+..||+.+++.
T Consensus 261 v~~sp~~~~la~~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 261 IAFNPKLQWVAVGTDQGVKIFNLMTQSK 288 (343)
T ss_dssp EEECSSSCEEEEEESSCEEEEESSSCCS
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCC
Confidence 566667766555444 889999887653
No 210
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=49.47 E-value=1.7e+02 Score=27.31 Aligned_cols=176 Identities=15% Similarity=0.123 Sum_probs=85.3
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.+||..+++...++.... ...++.+.|.. .+-+.+ . .+..+.+|+.....-........
T Consensus 324 d~~i~~w~~~~~~~~~~~~~~~----------~v~~~~~s~~g-~~l~~~--~----~dg~v~~~~~~~~~~~~~~~~~~ 386 (577)
T 2ymu_A 324 DKTVKLWNRNGQHLQTLTGHSS----------SVWGVAFSPDG-QTIASA--S----DDKTVKLWNRNGQLLQTLTGHSS 386 (577)
T ss_dssp TSCEEEEETTSCEEEEECCCSS----------CEEEEEECTTS-SEEEEE--E----TTSEEEEEETTCCEEEEEECCSS
T ss_pred CCeEEEEeCCCCeeEEEeCCCC----------CEEEEEECCCC-CEEEEE--e----CCCEEEEEcCCCCEEEEecCCCC
Confidence 3467788876666555543322 12345666643 222222 1 23467777754332222211111
Q ss_pred eeEEeCCcceE--EECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCcc
Q 045675 200 SCVIYGGQDAV--AVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFR 276 (382)
Q Consensus 200 ~~~~~~~~~~v--~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~ 276 (382)
.. .++ .-+|.....+..+ ..|..+|...+....+..... ....+... ++++.+....
T Consensus 387 --~v----~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~----- 446 (577)
T 2ymu_A 387 --SV----RGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTGHSS---SVWGVAFSPDDQTIASASD----- 446 (577)
T ss_dssp --CE----EEEEECTTSSCEEEEETT------SEEEEECTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEET-----
T ss_pred --Ce----EEEEECCCCCEEEEEeCC------CEEEEEeCCCCEEEEecCCCC---CeEEEEECCCCCEEEEEcC-----
Confidence 01 111 1245443333332 467778876655554433221 22333332 5665554443
Q ss_pred CCCCCeEEEEEECCCCCeeEEEEee-cCCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCcEEEEe
Q 045675 277 SRLSNRFELWVMNEGKGWTRTFNTA-FERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKRNFILP 339 (382)
Q Consensus 277 ~~~~~~~~iW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~~~~v~ 339 (382)
...+.+|.+... .+..+. ...-...+.+..+|.++... .+ .+.+||...+..+.+.
T Consensus 447 ---d~~v~~w~~~~~----~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 447 ---DKTVKLWNRNGQ----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 505 (577)
T ss_dssp ---TSEEEEEETTSC----EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred ---CCEEEEEECCCC----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Confidence 678999985432 222232 12224445666677755444 44 7888997665555543
No 211
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=49.40 E-value=1.3e+02 Score=26.18 Aligned_cols=55 Identities=5% Similarity=-0.008 Sum_probs=33.9
Q ss_pred CCeEEEEEECCCCCeeEEEEeec-------CCcccceEEeeCCcEEE-EEc----CeEEEEeCCCCcEEE
Q 045675 280 SNRFELWVMNEGKGWTRTFNTAF-------ERIAWPVGSFRDSKIIM-KSV----DQFFLFNPKTKRNFI 337 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~~-------~~~~~~~~~~~~g~l~l-~~~----~~~~~yd~~t~~~~~ 337 (382)
...+.+|.+... ..+..+.. ..-...+.+..++.+++ ... ..+.+||+++++...
T Consensus 206 dg~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 206 NGTVQISELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 272 (397)
T ss_dssp TSEEEEEETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred CCcEEEEECCCC---ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc
Confidence 678999998765 33344433 22344455566676444 333 378999998876433
No 212
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=49.25 E-value=1.2e+02 Score=25.60 Aligned_cols=140 Identities=13% Similarity=0.044 Sum_probs=74.4
Q ss_pred CCCEEEEEECCCC--CeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCC
Q 045675 177 YDAIAEVYSTSTG--KWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDC 254 (382)
Q Consensus 177 ~~~~~~vyss~t~--~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~ 254 (382)
.+..+.+++..++ .|+....... . .....+.-+|.++. ... ..|..||+..+.-..+..|... .
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~-~---~~~~~~~pdG~ilv-s~~-------~~V~~~d~~G~~~W~~~~~~~~--~ 78 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGW-E---CNSVAATKAGEILF-SYS-------KGAKMITRDGRELWNIAAPAGC--E 78 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTC-C---CCEEEECTTSCEEE-ECB-------SEEEEECTTSCEEEEEECCTTC--E
T ss_pred CCCEEEEEECCCCeEEEEeCCCccC-C---CcCeEECCCCCEEE-eCC-------CCEEEECCCCCEEEEEcCCCCc--c
Confidence 3457888888776 5876543210 0 00122333787776 333 3799999954444445554321 1
Q ss_pred eeeEE-EeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC---eeEEEEeecCC-c--ccceEEeeCCcEEEEEcC--eE
Q 045675 255 YVKAL-SYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG---WTRTFNTAFER-I--AWPVGSFRDSKIIMKSVD--QF 325 (382)
Q Consensus 255 ~~~l~-~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~---W~~~~~i~~~~-~--~~~~~~~~~g~l~l~~~~--~~ 325 (382)
..... ..+|.+.++... ..-.|+.++.. | |.....-.... . ...+....+|.+++.... .+
T Consensus 79 ~~~~~~~~dG~~lv~~~~---------~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 79 MQTARILPDGNALVAWCG---------HPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp EEEEEECTTSCEEEEEES---------TTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred ccccEECCCCCEEEEecC---------CCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEE
Confidence 12222 347777766543 13366777654 5 55432111111 1 223445567887766643 99
Q ss_pred EEEeCCCCcEEEEee
Q 045675 326 FLFNPKTKRNFILPI 340 (382)
Q Consensus 326 ~~yd~~t~~~~~v~~ 340 (382)
++||++.+...+...
T Consensus 149 ~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 149 REIAPNGQLLNSVKL 163 (276)
T ss_dssp EEECTTSCEEEEEEC
T ss_pred EEECCCCCEEEEEEC
Confidence 999999554444443
No 213
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=48.24 E-value=1.5e+02 Score=26.45 Aligned_cols=192 Identities=11% Similarity=0.012 Sum_probs=94.3
Q ss_pred ceeEEEEcccc--cceeccCCCC--CccccccceeEEEEEEEeeCC-CCCeEEEEEEeecCCCCCEEEEEECCC--CCee
Q 045675 120 GMAFVLWNPAT--NEFKGLPTPS--LTESRLKTFWMVSLGFGFNQD-TNDYVLVRIVNFQARYDAIAEVYSTST--GKWK 192 (382)
Q Consensus 120 ~~~~~V~NP~T--~~~~~LP~~~--~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~~~vyss~t--~~W~ 192 (382)
...++++||.+ .+...|.-.. .... .. .-+|+.+.+. .+..+++.+-. ......+++|.... +...
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~---~f--~PhGi~~~~d~dg~~~L~Vvnh--~~~~s~ielf~~d~~~~~~~ 154 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDIS---SF--NPHGISTFIDDDNTVYLLVVNH--PGSSSTVEVFKFQEEEKSLL 154 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGG---GC--CEEEEEEEECTTCCEEEEEEEC--STTCCEEEEEEEETTTTEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcC---ce--eeeeeEEEECCCCcEEEEEEEC--CCCCCeEEEEEEECCCCEEE
Confidence 55789999973 3444443221 1100 11 3567777554 34455555433 12345788876654 3333
Q ss_pred eecCCCCeeEEeCCcceEEECceEEEEeecc-cc----------cccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 193 EVAAGTGSCVIYGGQDAVAVKGVLHWIANGI-GV----------LVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 193 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~----------~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
.+...........+.-.+.-+|.+|.-.... .+ ......|..+|.. +.+.+.-... ..=.++..
T Consensus 155 ~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~---~pNGia~s 229 (355)
T 3sre_A 155 HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFD---FANGINIS 229 (355)
T ss_dssp EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEES---SEEEEEEC
T ss_pred EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCc---ccCcceEC
Confidence 3322211111101123344567766543311 00 0123578899985 3333210000 11123333
Q ss_pred -CC-eEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEee-CCcEEEEEc-C--eEEEEeCCC
Q 045675 262 -DQ-SLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFR-DSKIIMKSV-D--QFFLFNPKT 332 (382)
Q Consensus 262 -~g-~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~-~g~l~l~~~-~--~~~~yd~~t 332 (382)
|| .|+++... ...+.++.++.. + ......+.+.....-+.+.. +|.|++... + +++.||++.
T Consensus 230 pDg~~lYvadt~--------~~~I~~~~~~~~-g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~ 298 (355)
T 3sre_A 230 PDGKYVYIAELL--------AHKIHVYEKHAN-WTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAEN 298 (355)
T ss_dssp TTSSEEEEEEGG--------GTEEEEEEECTT-SCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTS
T ss_pred CCCCEEEEEeCC--------CCeEEEEEECCC-CcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCC
Confidence 55 56766665 566777777654 4 44444444433344466666 488988553 4 788888873
No 214
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=47.78 E-value=1.3e+02 Score=25.65 Aligned_cols=183 Identities=11% Similarity=0.124 Sum_probs=84.2
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.|||..+++...+..... ....+.+.+..+.-.++... .+..+.+|+..++.-...-....
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDA----------PVKTIHWIKAPNYSCVMTGS-----WDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSS----------CEEEEEEEECSSCEEEEEEE-----TTSEEEEECSSCSSCSEEEECSS
T ss_pred CCcEEEEEcCCCCceeeccccC----------ceEEEEEEeCCCCCEEEEcc-----CCCcEEEEECCCCcEEEEEecCC
Confidence 4589999998888766433221 12344553222222232222 23478899887754211111111
Q ss_pred eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCce--eeEeCCCCCCCCCeeeEEEeCCe---EEEEEecCCC
Q 045675 200 SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLEL--FWRTAMPELPTDCYVKALSYDQS---LALAVYPGLG 274 (382)
Q Consensus 200 ~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~--~~~i~~P~~~~~~~~~l~~~~g~---L~~~~~~~~~ 274 (382)
. . .........+. ++..+ ..+..+|+.+.. +..+..+.........+. .++. -.++...
T Consensus 172 ~--~---~~~~~~~~~~~-~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--- 235 (368)
T 3mmy_A 172 R--C---YCADVIYPMAV-VATAE------RGLIVYQLENQPSEFRRIESPLKHQHRCVAIF-KDKQNKPTGFALGS--- 235 (368)
T ss_dssp C--E---EEEEEETTEEE-EEEGG------GCEEEEECSSSCEEEEECCCSCSSCEEEEEEE-ECTTSCEEEEEEEE---
T ss_pred C--c---eEEEecCCeeE-EEeCC------CcEEEEEeccccchhhhccccccCCCceEEEc-ccCCCCCCeEEEec---
Confidence 0 0 01122223333 33322 367788887643 333333332211111111 1111 1133333
Q ss_pred ccCCCCCeEEEEEECCCCCeeEEEEeecCC-------------cccceEEeeCCcEEE-EEcC-eEEEEeCCCCcEEE
Q 045675 275 FRSRLSNRFELWVMNEGKGWTRTFNTAFER-------------IAWPVGSFRDSKIIM-KSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~-------------~~~~~~~~~~g~l~l-~~~~-~~~~yd~~t~~~~~ 337 (382)
....+.+|.++....-.....+.... -..-+.+..++.+++ ...+ .+.+||+++++...
T Consensus 236 ----~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 236 ----IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp ----TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred ----CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 26789999988752201111111000 133345556676444 4444 89999999876543
No 215
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=47.48 E-value=1.8e+02 Score=27.17 Aligned_cols=133 Identities=8% Similarity=-0.087 Sum_probs=69.3
Q ss_pred CCEEEEEECCCCCeeeecCCC-CeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCC
Q 045675 178 DAIAEVYSTSTGKWKEVAAGT-GSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDC 254 (382)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~-~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~ 254 (382)
+..+.+|+..++.... .... ..... ..+.+ +|.+...+..+ ..|..+|+.+.+-... +.......
T Consensus 466 d~~i~~~~~~~~~~~~-~~~~~~~~~v----~~~~~s~~g~~l~~~~~d------g~i~iw~~~~~~~~~~-~~~~h~~~ 533 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSF-DLKTPLRAKP----SYISISPSETYIAAGDVM------GKILLYDLQSREVKTS-RWAFRTSK 533 (615)
T ss_dssp TSCEEEEETTEEEEEE-ECSSCCSSCE----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEC-CSCCCSSC
T ss_pred CCeEEEEECCCccccc-cccCCccCce----EEEEECCCCCEEEEcCCC------CeEEEeeCCCCcceeE-eecCCCCc
Confidence 3478888888765432 1111 11111 22222 66655555443 4788899987655432 21101112
Q ss_pred eeeEEEe-----------CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEEEEc
Q 045675 255 YVKALSY-----------DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIMKSV 322 (382)
Q Consensus 255 ~~~l~~~-----------~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l~~~ 322 (382)
...+... +|++.+.... ...+.||.++.. + ..+..+.. ..-..-+.+..++.|+....
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~--------dg~i~iw~~~~~-~-~~~~~~~~h~~~v~~l~~s~~~~l~s~~~ 603 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSL--------DTNIFIYSVKRP-M-KIIKALNAHKDGVNNLLWETPSTLVSSGA 603 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEET--------TSCEEEEESSCT-T-CCEEETTSSTTCEEEEEEEETTEEEEEET
T ss_pred eeEEEEcCccccccccccCCCEEEEEcC--------CCcEEEEECCCC-c-eechhhhcCccceEEEEEcCCCCeEEecC
Confidence 2333322 5666665554 679999999875 2 22232321 12244456667777434444
Q ss_pred C-eEEEEeCCC
Q 045675 323 D-QFFLFNPKT 332 (382)
Q Consensus 323 ~-~~~~yd~~t 332 (382)
+ .+.+||+++
T Consensus 604 d~~v~iw~~~~ 614 (615)
T 1pgu_A 604 DACIKRWNVVL 614 (615)
T ss_dssp TSCEEEEEEC-
T ss_pred CceEEEEeeec
Confidence 4 788888765
No 216
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=47.24 E-value=1.3e+02 Score=25.60 Aligned_cols=192 Identities=11% Similarity=0.099 Sum_probs=93.7
Q ss_pred ccCceEEEeeCCCCceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 106 SCNGLLCLDVSSAFGMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 106 s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+.+|-.++.... +..+.|||..+++... +..... ....+.+++.. .+ ++... .+..+.++
T Consensus 74 s~dg~~l~s~s~--D~~v~~wd~~~~~~~~~~~~h~~----------~v~~~~~~~~~-~~-l~s~s-----~D~~i~vw 134 (319)
T 3frx_A 74 TADGAYALSASW--DKTLRLWDVATGETYQRFVGHKS----------DVMSVDIDKKA-SM-IISGS-----RDKTIKVW 134 (319)
T ss_dssp CTTSSEEEEEET--TSEEEEEETTTTEEEEEEECCSS----------CEEEEEECTTS-CE-EEEEE-----TTSCEEEE
T ss_pred CCCCCEEEEEeC--CCEEEEEECCCCCeeEEEccCCC----------cEEEEEEcCCC-CE-EEEEe-----CCCeEEEE
Confidence 335555444433 5689999999887543 222111 13345565543 22 22222 33468888
Q ss_pred ECCCCCeeeecCCCCe--eEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-e
Q 045675 185 STSTGKWKEVAAGTGS--CVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALS-Y 261 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~--~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~ 261 (382)
+.....-......... ...........-++.....+.. ...|..+|+.+.+......... .....+.. -
T Consensus 135 d~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~sp 206 (319)
T 3frx_A 135 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN------DKMVKAWNLNQFQIEADFIGHN--SNINTLTASP 206 (319)
T ss_dssp ETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEET------TSCEEEEETTTTEEEEEECCCC--SCEEEEEECT
T ss_pred ECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC------CCEEEEEECCcchhheeecCCC--CcEEEEEEcC
Confidence 8765432222111110 0000000111112223332222 2478888988765433211111 12233333 2
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEc-CeEEEEeCCCCcE
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSV-DQFFLFNPKTKRN 335 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-~~~~~yd~~t~~~ 335 (382)
+|++.+.... ...+.||.+... ..+..+....-...+.+..++..+.... +.+.+|+++++..
T Consensus 207 ~g~~l~s~~~--------dg~i~iwd~~~~---~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~ 270 (319)
T 3frx_A 207 DGTLIASAGK--------DGEIMLWNLAAK---KAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYL 270 (319)
T ss_dssp TSSEEEEEET--------TCEEEEEETTTT---EEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEE
T ss_pred CCCEEEEEeC--------CCeEEEEECCCC---cEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCee
Confidence 6666555554 678999998876 4445554433355566677777554444 4777888776543
No 217
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=47.15 E-value=2.5e+02 Score=28.60 Aligned_cols=176 Identities=14% Similarity=0.067 Sum_probs=88.0
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.|||..+.+....-... . ....+.|.+ +.+ ++... .+..+.+++..++.-...-....
T Consensus 38 Dg~I~lw~~~~~~~~~~~~~~-------~---~V~~l~fsp--g~~-L~S~s-----~D~~v~lWd~~~~~~~~~~~~~~ 99 (902)
T 2oaj_A 38 TGEVHIYGQQQVEVVIKLEDR-------S---AIKEMRFVK--GIY-LVVIN-----AKDTVYVLSLYSQKVLTTVFVPG 99 (902)
T ss_dssp TSEEEEECSTTCEEEEECSSC-------C---CEEEEEEET--TTE-EEEEE-----TTCEEEEEETTTCSEEEEEECSS
T ss_pred CCEEEEEeCCCcEEEEEcCCC-------C---CEEEEEEcC--CCE-EEEEE-----CcCeEEEEECCCCcEEEEEcCCC
Confidence 457888887766544321111 1 234677777 443 33332 34588899888764221100111
Q ss_pred eeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCC---------CCCCCCCeeeEEEe--CCeEE
Q 045675 200 SCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAM---------PELPTDCYVKALSY--DQSLA 266 (382)
Q Consensus 200 ~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~---------P~~~~~~~~~l~~~--~g~L~ 266 (382)
.. .++.+ +|.....+..+ ..|..+|+.+........ +.........+... ++.+.
T Consensus 100 --~V----~~v~~sp~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 100 --KI----TSIDTDASLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp --CE----EEEECCTTCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred --CE----EEEEECCCCCEEEEEcCC------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 01 11211 34433333332 468888998876532221 11111122333333 23444
Q ss_pred EEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC-------------------CcccceEEeeCCcEEEEE-cC-eE
Q 045675 267 LAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE-------------------RIAWPVGSFRDSKIIMKS-VD-QF 325 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~-------------------~~~~~~~~~~~g~l~l~~-~~-~~ 325 (382)
++... ...+ +|-++.. ..+..+... ..+.-+.+..+|..++.. .+ .+
T Consensus 168 ~~g~~--------dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i 235 (902)
T 2oaj_A 168 LISYE--------YVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSL 235 (902)
T ss_dssp EEECS--------SCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEeC--------CCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeE
Confidence 44443 5678 9998775 223333211 113445556677755444 44 89
Q ss_pred EEEeCCCCcEEE
Q 045675 326 FLFNPKTKRNFI 337 (382)
Q Consensus 326 ~~yd~~t~~~~~ 337 (382)
.+||+++++...
T Consensus 236 ~lWd~~~g~~~~ 247 (902)
T 2oaj_A 236 VFWDANSGHMIM 247 (902)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCcEEE
Confidence 999999876543
No 218
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=47.11 E-value=1.5e+02 Score=26.19 Aligned_cols=105 Identities=10% Similarity=0.081 Sum_probs=57.3
Q ss_pred CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCC
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEG 291 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~ 291 (382)
+|.....+..+ ..|..+|+.+.+.......... ....+... +|...+.... ...+.+|.+...
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~--------d~~v~iwd~~~~ 197 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQGHEQ--DIYSLDYFPSGDKLVSGSG--------DRTVRIWDLRTG 197 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEET--------TSEEEEEETTTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEccCCC--CEEEEEEcCCCCEEEEecC--------CCcEEEEECCCC
Confidence 56555444433 4788899988765433211111 22333332 5555444443 678999988765
Q ss_pred CCeeEEEEeecCCcccceEEee-CCcEEEEE-cC-eEEEEeCCCCcEE
Q 045675 292 KGWTRTFNTAFERIAWPVGSFR-DSKIIMKS-VD-QFFLFNPKTKRNF 336 (382)
Q Consensus 292 ~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~~-~~-~~~~yd~~t~~~~ 336 (382)
.....+....-...+.+.. +|.+++.. .+ .+.+||+++++..
T Consensus 198 ---~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 198 ---QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp ---EEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred ---eeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 2233333333234445554 56655444 34 8889999887643
No 219
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=46.64 E-value=1.5e+02 Score=26.01 Aligned_cols=194 Identities=11% Similarity=-0.028 Sum_probs=96.8
Q ss_pred ccCceE-EEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 106 SCNGLL-CLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 106 s~~Gll-~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
|-+|-+ ++..... +..+.|||+.|++.+....... ....+.|.|.+ .+-+.+ . ...+.++
T Consensus 142 SpDg~~la~as~~~-d~~i~iwd~~~~~~~~~~~~~~----------~V~~v~fspdg-~~l~s~--s-----~~~~~~~ 202 (365)
T 4h5i_A 142 SREGTVAAIASSKV-PAIMRIIDPSDLTEKFEIETRG----------EVKDLHFSTDG-KVVAYI--T-----GSSLEVI 202 (365)
T ss_dssp CTTSSCEEEEESCS-SCEEEEEETTTTEEEEEEECSS----------CCCEEEECTTS-SEEEEE--C-----SSCEEEE
T ss_pred cCCCCEEEEEECCC-CCEEEEeECCCCcEEEEeCCCC----------ceEEEEEccCC-ceEEec--c-----ceeEEEE
Confidence 445643 3333211 4689999999988665433221 12245666643 222222 1 2256677
Q ss_pred ECCCCCeeeecCC-CCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe---CCCCCCCCCeeeEEE
Q 045675 185 STSTGKWKEVAAG-TGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT---AMPELPTDCYVKALS 260 (382)
Q Consensus 185 ss~t~~W~~~~~~-~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i---~~P~~~~~~~~~l~~ 260 (382)
...++.-...... ...... . .-...-+|.....+..+.. ....+..+|......... .+.... .....+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~v-~-~v~fspdg~~l~~~s~d~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~V~~~~~ 277 (365)
T 4h5i_A 203 STVTGSCIARKTDFDKNWSL-S-KINFIADDTVLIAASLKKG--KGIVLTKISIKSGNTSVLRSKQVTNRF-KGITSMDV 277 (365)
T ss_dssp ETTTCCEEEEECCCCTTEEE-E-EEEEEETTEEEEEEEESSS--CCEEEEEEEEETTEEEEEEEEEEESSC-SCEEEEEE
T ss_pred EeccCcceeeeecCCCCCCE-E-EEEEcCCCCEEEEEecCCc--ceeEEeecccccceecceeeeeecCCC-CCeEeEEE
Confidence 7666654322222 111111 0 1223346666555543321 123556666665544332 111111 11222332
Q ss_pred -eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee-c-CCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCc
Q 045675 261 -YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA-F-ERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKR 334 (382)
Q Consensus 261 -~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~-~-~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~ 334 (382)
-+|++.+.+.. ...+.||.++.. ..+..+. . ...+.-+++..+|..++.. .+ .+-++|+..+.
T Consensus 278 Spdg~~lasgs~--------D~~V~iwd~~~~---~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 278 DMKGELAVLASN--------DNSIALVKLKDL---SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp CTTSCEEEEEET--------TSCEEEEETTTT---EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CCCCCceEEEcC--------CCEEEEEECCCC---cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 37776665554 678999988765 4444442 1 1225557777888865544 34 88888886543
No 220
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=46.61 E-value=29 Score=26.00 Aligned_cols=43 Identities=2% Similarity=0.002 Sum_probs=27.2
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEe---eCCCCCeEEEEEE
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGF---NQDTNDYVLVRIV 171 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykvv~~~ 171 (382)
..++++||.++.|+........ . ..+.+.. |...+.|+|++..
T Consensus 20 A~Vm~~D~~~~~W~p~~~g~ls------~--v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEGGGIS------R--VGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEEECTTSSSSEECSCCSCE------E--EEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCCCcc------c--EEEEEecCCCCCCCCEEEEEEEE
Confidence 4789999999998755443210 0 1222333 5567889999875
No 221
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=45.88 E-value=1.8e+02 Score=26.57 Aligned_cols=195 Identities=9% Similarity=0.017 Sum_probs=97.7
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCC-CCEEEEEE
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARY-DAIAEVYS 185 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~-~~~~~vys 185 (382)
.+|.|.+.+. ...+.++++.+++...+..... ...++.+|+..+ +-.|.-.. ... ...+.+++
T Consensus 148 ~~g~Lyv~d~---~~~I~~id~~~~~v~~~~~~~~----------~P~~ia~d~~G~-~lyvad~~--~~~~~~~v~~~~ 211 (430)
T 3tc9_A 148 NHNHLYLVGE---QHPTRLIDFEKEYVSTVYSGLS----------KVRTICWTHEAD-SMIITNDQ--NNNDRPNNYILT 211 (430)
T ss_dssp EEEEEEEEEB---TEEEEEEETTTTEEEEEECCCS----------CEEEEEECTTSS-EEEEEECC--SCTTSEEEEEEE
T ss_pred CCCeEEEEeC---CCcEEEEECCCCEEEEEecCCC----------CcceEEEeCCCC-EEEEEeCC--CCcccceEEEEe
Confidence 4677776665 2578888998877665543211 133677777654 22222111 111 12344454
Q ss_pred CCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-
Q 045675 186 TSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS- 260 (382)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~- 260 (382)
. .+.|....... .. ....++.+ +|.+|+..... ..|..||+.+..... ...+... ....++.
T Consensus 212 ~-~g~~~~~~~l~---~~-~~p~giavdp~~g~lyv~d~~~------~~V~~~~~~~~~~~~~~~~~~~~--~P~gia~~ 278 (430)
T 3tc9_A 212 R-ESGFKVITELT---KG-QNCNGAETHPINGELYFNSWNA------GQVFRYDFTTQETTPLFTIQDSG--WEFHIQFH 278 (430)
T ss_dssp G-GGTSCSEEEEE---EC-SSCCCEEECTTTCCEEEEETTT------TEEEEEETTTTEEEEEEECSSSS--CCEEEEEC
T ss_pred C-CCceeeeeeec---cC-CCceEEEEeCCCCEEEEEECCC------CEEEEEECCCCcEEEEEEcCCCC--cceeEEEc
Confidence 3 33343111000 01 11133333 68899876543 489999998876633 3443321 2234444
Q ss_pred eCCe-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEee--------------cCCcccce-EEe----------e
Q 045675 261 YDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTA--------------FERIAWPV-GSF----------R 313 (382)
Q Consensus 261 ~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~--------------~~~~~~~~-~~~----------~ 313 (382)
-+|+ |+++... ...+.++..+...+ ......+. ...+..|. ++. .
T Consensus 279 pdG~~lyv~d~~--------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 279 PSGNYAYIVVVN--------QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp TTSSEEEEEETT--------TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred CCCCEEEEEECC--------CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 3566 7776654 55666655553212 11111111 01124455 443 2
Q ss_pred CCcEEEEEcC--eEEEEeCCCCcEEEEe
Q 045675 314 DSKIIMKSVD--QFFLFNPKTKRNFILP 339 (382)
Q Consensus 314 ~g~l~l~~~~--~~~~yd~~t~~~~~v~ 339 (382)
+|.||+.... ++..+|.. +++..+.
T Consensus 351 ~g~lyvaD~~n~~I~~i~~~-G~v~~~~ 377 (430)
T 3tc9_A 351 EYDFYFCDRENHCIRILTPQ-GRVTTFA 377 (430)
T ss_dssp CEEEEEEEGGGTEEEEECTT-SEEEEEE
T ss_pred CCeEEEEECCCcEEEEECCC-CcEEEEE
Confidence 3568887764 88999964 5555553
No 222
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=44.96 E-value=1.6e+02 Score=25.70 Aligned_cols=172 Identities=13% Similarity=0.102 Sum_probs=83.8
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.+||..+++... +..... ....+.+.+..+.-.++... .+..+.+++.+++.....-...
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~~----------~v~~~~~~~~~~g~~l~sgs-----~Dg~v~~wd~~~~~~~~~~~~h 239 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHGA----------DVLCLDLAPSETGNTFVSGG-----CDKKAMVWDMRSGQCVQAFETH 239 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS----------CEEEEEECCCSSCCEEEEEE-----TTSCEEEEETTTCCEEEEECCC
T ss_pred CCcEEEEeCCCCeEEEEEcCCCC----------CeEEEEEEeCCCCCEEEEEe-----CCCeEEEEECCCCcEEEEecCC
Confidence 4578999998877543 221111 12244555543322233222 2347889998877543221111
Q ss_pred CeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEe-CCCCCCCCCeeeEE-EeCCeEEEEEecCCC
Q 045675 199 GSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT-AMPELPTDCYVKAL-SYDQSLALAVYPGLG 274 (382)
Q Consensus 199 ~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i-~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~ 274 (382)
.. .. .++.+ +|.....+..+ ..|-.+|+.+..-..+ ...... .....+. ..+|.+.+....
T Consensus 240 ~~-~v----~~v~~~p~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~g~~l~~g~~--- 304 (354)
T 2pbi_B 240 ES-DV----NSVRYYPSGDAFASGSDD------ATCRLYDLRADREVAIYSKESII-FGASSVDFSLSGRLLFAGYN--- 304 (354)
T ss_dssp SS-CE----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTTCC-SCEEEEEECTTSSEEEEEET---
T ss_pred CC-Ce----EEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCCcc-cceeEEEEeCCCCEEEEEEC---
Confidence 10 01 12222 45544444433 4788899987644332 221111 0112222 236776666654
Q ss_pred ccCCCCCeEEEEEECCCCCeeEEEEee-cCCcccceEEeeCCcEEEEE-cC-eEEEEe
Q 045675 275 FRSRLSNRFELWVMNEGKGWTRTFNTA-FERIAWPVGSFRDSKIIMKS-VD-QFFLFN 329 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~g~l~l~~-~~-~~~~yd 329 (382)
...+.||.+... ..+..+. -...+..+.+..+|..++.. .+ .+.+||
T Consensus 305 -----d~~i~vwd~~~~---~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 305 -----DYTINVWDVLKG---SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -----TSCEEEEETTTC---SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred -----CCcEEEEECCCC---ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 678999988655 2333332 11224445556677644433 34 555553
No 223
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=44.17 E-value=1.4e+02 Score=25.06 Aligned_cols=149 Identities=14% Similarity=0.048 Sum_probs=72.5
Q ss_pred CCEEEEEECCCCCeeeecCCCCe--eEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceee-EeCCCCCC--C
Q 045675 178 DAIAEVYSTSTGKWKEVAAGTGS--CVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELP--T 252 (382)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~--~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~--~ 252 (382)
...+.+++..++.-...-..... ... .-.+.-+|...++.... ...|..+|+.+.+.. .+..+... .
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPM---VPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCC---CEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCcc---ceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccc
Confidence 34788888877643221111000 010 12223367444444332 247999999876653 34544310 0
Q ss_pred CCeeeEEE-eCC-eEEEEEecCC-CccCC--CCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEcCeEEE
Q 045675 253 DCYVKALS-YDQ-SLALAVYPGL-GFRSR--LSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSVDQFFL 327 (382)
Q Consensus 253 ~~~~~l~~-~~g-~L~~~~~~~~-~~~~~--~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~~~~~ 327 (382)
.....+.. -+| .|++...... ..... ....+.+|.++.. ..+..++.......+.+..+|..++..++.+..
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL---SRRKAFEAPRQITMLAWARDGSKLYGLGRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT---EEEEEEECCSSCCCEEECTTSSCEEEESSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC---cEEEEEeCCCCcceeEECCCCCEEEEeCCeEEE
Confidence 01112332 256 4555432100 00000 1467777877544 333444443334445666777744444668999
Q ss_pred EeCCCCcEEE
Q 045675 328 FNPKTKRNFI 337 (382)
Q Consensus 328 yd~~t~~~~~ 337 (382)
||+++++...
T Consensus 159 ~d~~~~~~~~ 168 (337)
T 1pby_B 159 MDPEAGTLVE 168 (337)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCcEee
Confidence 9999987653
No 224
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=44.06 E-value=2.5e+02 Score=27.82 Aligned_cols=198 Identities=12% Similarity=0.105 Sum_probs=97.5
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccc-cccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTES-RLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~-~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
+|-|-+... ...+..+||.++++...+..+.... ..... ....+..|... .. +.+.. ....+..|+.
T Consensus 367 ~g~lWiGt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~--~v~~i~~d~~g-~~--lWigt----~~~Gl~~~d~ 434 (795)
T 4a2l_A 367 DKNLWIGTN---DGGLNLYNPITQRFTSYTLQEDESARGIGSN--NIKAVYVDEKK-SL--VYIGT----HAGGLSILHR 434 (795)
T ss_dssp TSCEEEEES---SSCEEEECTTTCCEEEECCC------CCSCS--CEEEEEEETTT-TE--EEEEE----TTTEEEEEET
T ss_pred CCCEEEEEC---CCCeEEEcCCCCcEEEEecCCCCcccCCCCc--cEEEEEEcCCC-CE--EEEEe----CcCceeEEeC
Confidence 454444333 2368888998888776653321000 00001 12344445432 21 11111 2236888888
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeEeCCC---CCCC-CCeeeEEE
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMP---ELPT-DCYVKALS 260 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P---~~~~-~~~~~l~~ 260 (382)
.++.++......+.... ..-.++.. +|.+ |++... .+..||+.+++|..+... .... .....+.+
T Consensus 435 ~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~l-wigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 505 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVN-ENVYAILPDGEGNL-WLGTLS-------ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFR 505 (795)
T ss_dssp TTCCEEEECTTTSCCSC-SCEEEEEECSSSCE-EEEESS-------CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEE
T ss_pred CCCcEEEeecCCCCcCC-CeeEEEEECCCCCE-EEEecC-------ceeEEeCCCCeEEEccccccccccCCceEEEEEE
Confidence 88877765432110000 00122333 3554 555544 689999999999877432 1111 12233333
Q ss_pred -eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEe--ecCCc----ccceEEeeCCcEEEEEcCeEEEEeCCCC
Q 045675 261 -YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNT--AFERI----AWPVGSFRDSKIIMKSVDQFFLFNPKTK 333 (382)
Q Consensus 261 -~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i--~~~~~----~~~~~~~~~g~l~l~~~~~~~~yd~~t~ 333 (382)
.+|.|.+.... .+.+|..+.. .+ . +.. ....+ ...+....+|.|++.....++.||++++
T Consensus 506 d~~g~lWigt~~----------Gl~~~~~~~~-~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~~~~ 572 (795)
T 4a2l_A 506 DSHKRLWIGGEE----------GLSVFKQEGL-DI-Q-KASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDK 572 (795)
T ss_dssp CTTCCEEEEESS----------CEEEEEEETT-EE-E-ECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEETTTT
T ss_pred CCCCCEEEEeCC----------ceEEEeCCCC-eE-E-EecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECCCCC
Confidence 35667665432 1333333322 24 1 110 00111 2223333467788888789999999999
Q ss_pred cEEEEe
Q 045675 334 RNFILP 339 (382)
Q Consensus 334 ~~~~v~ 339 (382)
+++...
T Consensus 573 ~~~~~~ 578 (795)
T 4a2l_A 573 QIKRYN 578 (795)
T ss_dssp EEEEEC
T ss_pred cEEEeC
Confidence 888764
No 225
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=43.03 E-value=2.3e+02 Score=27.08 Aligned_cols=211 Identities=10% Similarity=-0.006 Sum_probs=104.9
Q ss_pred Cce-EEEeeCCCCceeEEEEccc--c-cceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeec-C--CCCCE
Q 045675 108 NGL-LCLDVSSAFGMAFVLWNPA--T-NEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQ-A--RYDAI 180 (382)
Q Consensus 108 ~Gl-l~~~~~~~~~~~~~V~NP~--T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~-~--~~~~~ 180 (382)
+.. |.+.... ...+++++.. + ++...|...+.... .. ....+.+.|.++....+..-... . .....
T Consensus 90 g~~~la~~~~~--~~~l~~~~~~~~g~~~~~~l~~~~~~~~---~~--~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 90 GGPLLVFTHFG--DQRLYAFEPDAPGGAVPRPLTPVSAVGG---GL--RWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp SSCEEEEEBTT--TCCEEEECTTSTTCCCCEECSCCCCSTT---CE--EEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred CCeEEEEEECC--CCeEEEEcCCCCCCCCCEeccCCccCCC---Cc--cccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 445 5544433 4578999987 4 77666665431100 01 23366777765432222211100 0 11236
Q ss_pred EEEEECCC------CCeeeec-CCCCeeEEeCCcceEEECce-EEEEeecccccc-cccEEEEEECC-Cc---eeeEeCC
Q 045675 181 AEVYSTST------GKWKEVA-AGTGSCVIYGGQDAVAVKGV-LHWIANGIGVLV-NEKFVVSYDMN-LE---LFWRTAM 247 (382)
Q Consensus 181 ~~vyss~t------~~W~~~~-~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~-~~~~i~~fD~~-~~---~~~~i~~ 247 (382)
+.+++..+ +.-+.+. .... ... .....-+|+ +++......... ....|..+|+. +. +...+.-
T Consensus 163 i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~---~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVRELSDDAHR-FVT---GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEETTSTTTTCGGGSEESSCSCSS-EEC---CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEECCCCccccCCceeEEEecCCC-ccc---CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 77788877 5555544 2211 111 234445674 666654431100 12478889998 55 4444321
Q ss_pred CCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCC----c---ccceEEeeCCcEE
Q 045675 248 PELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFER----I---AWPVGSFRDSKII 318 (382)
Q Consensus 248 P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~----~---~~~~~~~~~g~l~ 318 (382)
... .....+.. -||+|++.... .....||.++...+ +..+....... . ...+.+..++.++
T Consensus 239 ~~~--~~~~~~~~spdg~l~~~~~~--------~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 239 GPE--EAIAQAEWAPDGSLIVATDR--------TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp ETT--BCEEEEEECTTSCEEEEECT--------TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred CCC--ceEcceEECCCCeEEEEECC--------CCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEE
Confidence 111 12233333 37886655443 34457888875323 55432211100 0 2234555567776
Q ss_pred EEEc-C--eEEEEeCCCCcEEEEe
Q 045675 319 MKSV-D--QFFLFNPKTKRNFILP 339 (382)
Q Consensus 319 l~~~-~--~~~~yd~~t~~~~~v~ 339 (382)
+... . +++.+|+++++.+.+.
T Consensus 309 ~~~~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 309 VVHGKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEEBSSSCEEEEEETTTTEEEECC
T ss_pred EEEEcCccEEEEEECCCCcEEEec
Confidence 6653 2 8888899888877664
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=42.83 E-value=1.5e+02 Score=24.85 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=48.7
Q ss_pred cEEEEEECC-CceeeE----eCCCCCCCCCeeeEEE-eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC
Q 045675 230 KFVVSYDMN-LELFWR----TAMPELPTDCYVKALS-YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE 303 (382)
Q Consensus 230 ~~i~~fD~~-~~~~~~----i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~ 303 (382)
..|..||+. +.++.. ..+|.........+.. -+|.|++.... ...+.+|..+.. .-......+.
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~--------~~~i~~~d~~~g-~~~~~~~~~~- 267 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG--------SSHIEVFGPDGG-QPKMRIRCPF- 267 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET--------TTEEEEECTTCB-SCSEEEECSS-
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC--------CCEEEEEcCCCC-cEeEEEeCCC-
Confidence 478889876 444321 1333221012233443 36888877654 445666654422 1222222222
Q ss_pred CcccceEEeeCCc-EEEEEcC--eEEEEeCCCC
Q 045675 304 RIAWPVGSFRDSK-IIMKSVD--QFFLFNPKTK 333 (382)
Q Consensus 304 ~~~~~~~~~~~g~-l~l~~~~--~~~~yd~~t~ 333 (382)
....-+.+..+|. |++.... .++.||+++.
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 1123344456777 7777765 8999998764
No 227
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=42.51 E-value=1.5e+02 Score=24.83 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=20.8
Q ss_pred ccceEEeeCCcEEE-EEcC-eEEEEeCCCC-cEEEEe
Q 045675 306 AWPVGSFRDSKIIM-KSVD-QFFLFNPKTK-RNFILP 339 (382)
Q Consensus 306 ~~~~~~~~~g~l~l-~~~~-~~~~yd~~t~-~~~~v~ 339 (382)
+.-+.+..++.+++ ...+ .+.+||++++ .++.+.
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 33455556676444 4444 7999999876 455554
No 228
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=41.56 E-value=2.2e+02 Score=26.52 Aligned_cols=154 Identities=10% Similarity=0.065 Sum_probs=76.2
Q ss_pred EEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCCe--eEEeCCcceEEE--C-ceEEEEeeccccccc
Q 045675 154 LGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTGS--CVIYGGQDAVAV--K-GVLHWIANGIGVLVN 228 (382)
Q Consensus 154 ~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~--~~~~~~~~~v~~--~-G~lywl~~~~~~~~~ 228 (382)
..+.+.|... +.++... .+..+.+|+..+..-...-..... ... .++.+ + |.....+..+
T Consensus 164 ~~~~~~~~~~-~~l~~~~-----~d~~v~vwd~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~l~~~~~d----- 228 (615)
T 1pgu_A 164 NACHLKQSRP-MRSMTVG-----DDGSVVFYQGPPFKFSASDRTHHKQGSFV----RDVEFSPDSGEFVITVGSD----- 228 (615)
T ss_dssp EEEEECSSSS-CEEEEEE-----TTTEEEEEETTTBEEEEEECSSSCTTCCE----EEEEECSTTCCEEEEEETT-----
T ss_pred EEEEECCCCC-cEEEEEe-----CCCcEEEEeCCCcceeeeecccCCCCceE----EEEEECCCCCCEEEEEeCC-----
Confidence 3566666543 3333332 235788888766532211111000 011 12222 4 5555544433
Q ss_pred ccEEEEEECCCceeeEeC-CCC-CCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC--C
Q 045675 229 EKFVVSYDMNLELFWRTA-MPE-LPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE--R 304 (382)
Q Consensus 229 ~~~i~~fD~~~~~~~~i~-~P~-~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~--~ 304 (382)
..|..+|+.+.+..... .+. ........+...+|.+.+.... ...+.+|.+... ..+..+... .
T Consensus 229 -g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~--------d~~i~~wd~~~~---~~~~~~~~~~~~ 296 (615)
T 1pgu_A 229 -RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGA--------DATIRVWDVTTS---KCVQKWTLDKQQ 296 (615)
T ss_dssp -CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEET--------TSEEEEEETTTT---EEEEEEECCTTC
T ss_pred -CeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcC--------CCcEEEEECCCC---cEEEEEcCCCCc
Confidence 47889999876654332 210 1111223333337776666664 678999998765 334444332 1
Q ss_pred c---ccceEEeeCCc-EEEEEcC-eEEEEeCCCCcE
Q 045675 305 I---AWPVGSFRDSK-IIMKSVD-QFFLFNPKTKRN 335 (382)
Q Consensus 305 ~---~~~~~~~~~g~-l~l~~~~-~~~~yd~~t~~~ 335 (382)
. ...+... ++. ++....+ .+..||+++++.
T Consensus 297 ~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 297 LGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEV 331 (615)
T ss_dssp GGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEE
T ss_pred ccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcE
Confidence 1 1122222 444 4444544 899999987543
No 229
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=39.72 E-value=2.1e+02 Score=25.69 Aligned_cols=66 Identities=8% Similarity=0.051 Sum_probs=38.9
Q ss_pred eCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEE-EEcC-eEEEEeCCCCcEEE
Q 045675 261 YDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIM-KSVD-QFFLFNPKTKRNFI 337 (382)
Q Consensus 261 ~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l-~~~~-~~~~yd~~t~~~~~ 337 (382)
.+|.+.++... ...+.+|.+... ..+..+.. ......+.+..++..++ ...+ .+.+||+++++...
T Consensus 278 ~~~~~l~~~~~--------d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 278 GHGNIVVSGSY--------DNTLIVWDVAQM---KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp EETTEEEEEET--------TSCEEEEETTTT---EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEeC--------CCeEEEEECCCC---cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 34555555554 568999988765 33444422 12244455566666444 4444 89999998876443
No 230
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=38.49 E-value=2e+02 Score=25.14 Aligned_cols=66 Identities=11% Similarity=0.059 Sum_probs=41.3
Q ss_pred CCeEE-EEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEc-CeEEEEeCCCCcEEE
Q 045675 262 DQSLA-LAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSV-DQFFLFNPKTKRNFI 337 (382)
Q Consensus 262 ~g~L~-~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-~~~~~yd~~t~~~~~ 337 (382)
||++. ++... ....+.||-++.. ..+..+....-+.-+.+..+|.++.... +.+..++..+++...
T Consensus 144 Dg~~la~as~~-------~d~~i~iwd~~~~---~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 144 EGTVAAIASSK-------VPAIMRIIDPSDL---TEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIA 211 (365)
T ss_dssp TSSCEEEEESC-------SSCEEEEEETTTT---EEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEE
T ss_pred CCCEEEEEECC-------CCCEEEEeECCCC---cEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCccee
Confidence 67654 44443 3678999998776 4445554333355567777888665554 477777777766443
No 231
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=38.22 E-value=1.8e+02 Score=24.53 Aligned_cols=175 Identities=7% Similarity=-0.089 Sum_probs=83.1
Q ss_pred ceeEEEEcccccc----eeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC-CCCCeeee
Q 045675 120 GMAFVLWNPATNE----FKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST-STGKWKEV 194 (382)
Q Consensus 120 ~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss-~t~~W~~~ 194 (382)
...+.|||..+++ ...+..... ....+.+.+. +.+.++... .+..+.+|+. .++.-...
T Consensus 32 d~~v~iw~~~~~~~~~~~~~~~~~~~----------~v~~~~~~~~-~~~~l~~~~-----~dg~i~~wd~~~~~~~~~~ 95 (342)
T 1yfq_A 32 DGSLTVYKFDIQAKNVDLLQSLRYKH----------PLLCCNFIDN-TDLQIYVGT-----VQGEILKVDLIGSPSFQAL 95 (342)
T ss_dssp TSEEEEEEEETTTTEEEEEEEEECSS----------CEEEEEEEES-SSEEEEEEE-----TTSCEEEECSSSSSSEEEC
T ss_pred CCeEEEEEeCCCCccccceeeeecCC----------ceEEEEECCC-CCcEEEEEc-----CCCeEEEEEeccCCceEec
Confidence 4578889887766 332221111 1334556654 442333322 2347899998 77765544
Q ss_pred cC--CCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCC---------ceeeEeCCCCCCCCCeeeEEEeCC
Q 045675 195 AA--GTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNL---------ELFWRTAMPELPTDCYVKALSYDQ 263 (382)
Q Consensus 195 ~~--~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~---------~~~~~i~~P~~~~~~~~~l~~~~g 263 (382)
.. ... .. ....+..|.....+..+ ..|..+|+.+ .+... .+... .....+....+
T Consensus 96 ~~~~~~~--~v---~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~--~~v~~~~~~~~ 161 (342)
T 1yfq_A 96 TNNEANL--GI---CRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSN-NTKVK--NKIFTMDTNSS 161 (342)
T ss_dssp BSCCCCS--CE---EEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSS-SSSSC--CCEEEEEECSS
T ss_pred cccCCCC--ce---EEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeee-EEeeC--CceEEEEecCC
Confidence 43 211 11 01111213333333332 4788888765 22111 11111 12333444444
Q ss_pred eEEEEEecCCCccCCCCCeEEEEEECC-CCCeeEEEEeecCCcccceEEee-CCcEEEE-EcC-eEEEEeCCCC
Q 045675 264 SLALAVYPGLGFRSRLSNRFELWVMNE-GKGWTRTFNTAFERIAWPVGSFR-DSKIIMK-SVD-QFFLFNPKTK 333 (382)
Q Consensus 264 ~L~~~~~~~~~~~~~~~~~~~iW~l~~-~~~W~~~~~i~~~~~~~~~~~~~-~g~l~l~-~~~-~~~~yd~~t~ 333 (382)
. ++... ....+.+|.+.. ...-..............+.+.. ++..++. ..+ .+.+||.+.+
T Consensus 162 ~--l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 162 R--LIVGM-------NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp E--EEEEE-------STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred c--EEEEe-------CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 4 33333 267899999987 42211112222222344556665 6665444 444 7777777654
No 232
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=38.14 E-value=1.9e+02 Score=24.80 Aligned_cols=170 Identities=16% Similarity=0.150 Sum_probs=82.0
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.+||..+++... +..... ....+.+.|.. .+.+ ... .+..+.+|+..++.-...-...
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~----------~v~~~~~~~~~-~~l~-sg~-----~d~~v~~wd~~~~~~~~~~~~h 225 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTG----------DVMSLSLAPDT-RLFV-SGA-----CDASAKLWDVREGMCRQTFTGH 225 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS----------CEEEEEECTTS-SEEE-EEE-----TTSCEEEEETTTCSEEEEECCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCC----------ceEEEEECCCC-CEEE-EEe-----CCCcEEEEECCCCeeEEEEcCC
Confidence 4578889988876543 221111 13356666643 2222 221 3347888888776422211110
Q ss_pred CeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-eCCeEEEEEecCCC
Q 045675 199 GSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS-YDQSLALAVYPGLG 274 (382)
Q Consensus 199 ~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~ 274 (382)
.. .. .++.+ +|.....+..+ ..|-.+|+.+.+-.. +..+.... ....+.. -+|++.+.+..
T Consensus 226 ~~-~v----~~v~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~g~~--- 290 (340)
T 1got_B 226 ES-DI----NAICFFPNGNAFATGSDD------ATCRLFDLRADQELMTYSHDNIIC-GITSVSFSKSGRLLLAGYD--- 290 (340)
T ss_dssp SS-CE----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTTCCS-CEEEEEECTTSSEEEEEET---
T ss_pred cC-CE----EEEEEcCCCCEEEEEcCC------CcEEEEECCCCcEEEEEccCCccc-ceEEEEECCCCCEEEEECC---
Confidence 00 01 11222 45554444433 478889998765432 23222110 1222322 36777666664
Q ss_pred ccCCCCCeEEEEEECCCCCeeEEEEeec-CCcccceEEeeCCcEEE-EEcC-eEEEEe
Q 045675 275 FRSRLSNRFELWVMNEGKGWTRTFNTAF-ERIAWPVGSFRDSKIIM-KSVD-QFFLFN 329 (382)
Q Consensus 275 ~~~~~~~~~~iW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~g~l~l-~~~~-~~~~yd 329 (382)
...+.||.+... .....+.- ...+.-+.+..+|..++ ...+ .+.+||
T Consensus 291 -----d~~i~vwd~~~~---~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 291 -----DFNCNVWDALKA---DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -----TSEEEEEETTTC---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -----CCeEEEEEcccC---cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 678999987654 33333321 12233455555666443 3333 555554
No 233
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=38.09 E-value=2e+02 Score=24.93 Aligned_cols=138 Identities=8% Similarity=-0.059 Sum_probs=71.5
Q ss_pred eccCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEE
Q 045675 105 GSCNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVY 184 (382)
Q Consensus 105 ~s~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vy 184 (382)
+..+|.|...+.. ...+.++++..+....+...... .-.++..|+..+...+. . ......++.+
T Consensus 87 d~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~~~---------~P~giavdp~~g~ly~t---d--~~~~~~I~r~ 150 (318)
T 3sov_A 87 DWLGEKLYWTDSE--TNRIEVSNLDGSLRKVLFWQELD---------QPRAIALDPSSGFMYWT---D--WGEVPKIERA 150 (318)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCS---------SEEEEEEEGGGTEEEEE---E--CSSSCEEEEE
T ss_pred EcCCCeEEEEECC--CCEEEEEECCCCcEEEEEeCCCC---------CccEEEEeCCCCEEEEE---e--cCCCCEEEEE
Confidence 3346666665543 45777888765544444221111 12367778765432221 1 1123467777
Q ss_pred ECCCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEe
Q 045675 185 STSTGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSY 261 (382)
Q Consensus 185 ss~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 261 (382)
+.....=+.+....-.. ..++.+ +|.|||..... ..|.++|+....-+.+.. ... .....+++.
T Consensus 151 ~~dG~~~~~~~~~~l~~-----Pnglavd~~~~~lY~aD~~~------~~I~~~d~dG~~~~~~~~-~~~-~~P~glav~ 217 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYW-----PNGLTLDYEEQKLYWADAKL------NFIHKSNLDGTNRQAVVK-GSL-PHPFALTLF 217 (318)
T ss_dssp ETTSCSCEEEECSSCSC-----EEEEEEETTTTEEEEEETTT------TEEEEEETTSCSCEEEEC-SCC-SCEEEEEEE
T ss_pred EcCCCCeEEEEECCCCC-----ccEEEEeccCCEEEEEECCC------CEEEEEcCCCCceEEEec-CCC-CCceEEEEe
Confidence 76543222221110011 133333 68999987543 589999997543333321 111 134567778
Q ss_pred CCeEEEEEec
Q 045675 262 DQSLALAVYP 271 (382)
Q Consensus 262 ~g~L~~~~~~ 271 (382)
++.|++....
T Consensus 218 ~~~lywtd~~ 227 (318)
T 3sov_A 218 EDILYWTDWS 227 (318)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEEecC
Confidence 8888887554
No 234
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=38.08 E-value=3e+02 Score=27.03 Aligned_cols=130 Identities=12% Similarity=0.094 Sum_probs=0.0
Q ss_pred EEEEECCCCCeeeecCC--CCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeE
Q 045675 181 AEVYSTSTGKWKEVAAG--TGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKA 258 (382)
Q Consensus 181 ~~vyss~t~~W~~~~~~--~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l 258 (382)
+..|+..++.++..... ...... .....-..--.|++..+ .+..||+.++++..+............+
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~---~~i~~d~~g~lWigt~~-------Gl~~~~~~~~~~~~~~~~gl~~~~i~~i 564 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSP---NYLLCDEDGLLWVGFHG-------GVMRINPKDESQQSISFGSFSNNEILSM 564 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCE---EEEEECTTSCEEEEETT-------EEEEECC--CCCCBCCCCC---CCEEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCccc---ceEEECCCCCEEEEecC-------ceEEEecCCCceEEecccCCCccceEEE
Q ss_pred EEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEcCeEEEEeCCC
Q 045675 259 LSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSVDQFFLFNPKT 332 (382)
Q Consensus 259 ~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~~~~~yd~~t 332 (382)
.+.+|.|.+.... -+..++....=...+.++-..+........+|+|+|...+.+..+|++.
T Consensus 565 ~~~~g~lWi~t~~------------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 565 TCVKNSIWVSTTN------------GLWIIDRKTMDARQQNMTNKRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp EEETTEEEEEESS------------CEEEEETTTCCEEEC--CCCCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred EECCCCEEEECCC------------CeEEEcCCCceeEEecCCCCceeeeEEECCCCcEEEecCCceEEEChhh
No 235
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=37.94 E-value=16 Score=21.78 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=9.5
Q ss_pred CCCCHHHHHHHHhcCC
Q 045675 10 SSVPLVIITDILLQLP 25 (382)
Q Consensus 10 ~~LP~dll~~IL~rLp 25 (382)
..||.||.+|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 4566666666665443
No 236
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=37.26 E-value=1.9e+02 Score=24.50 Aligned_cols=140 Identities=9% Similarity=0.041 Sum_probs=70.1
Q ss_pred CCEEEEEECCCCC--eeeecCCCC--eeEE--eCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCC
Q 045675 178 DAIAEVYSTSTGK--WKEVAAGTG--SCVI--YGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELP 251 (382)
Q Consensus 178 ~~~~~vyss~t~~--W~~~~~~~~--~~~~--~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~ 251 (382)
+..+.+|+..++. ......... .... .....+..-+|.+...+..+ ..|..+|+.+.+.........
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~- 210 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN------GDIKLFDLRNMALRWETNIKN- 210 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT------SEEEEEETTTTEEEEEEECSS-
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC------CeEEEEECccCceeeecCCCC-
Confidence 3478899888764 333322211 0011 00000122456655555443 489999998876543311111
Q ss_pred CCCeeeEEEe----CCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEE-EEe-ecCCcccceEEeeCCc-EEEEEc-
Q 045675 252 TDCYVKALSY----DQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRT-FNT-AFERIAWPVGSFRDSK-IIMKSV- 322 (382)
Q Consensus 252 ~~~~~~l~~~----~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~-~~i-~~~~~~~~~~~~~~g~-l~l~~~- 322 (382)
....+... +|.+.++... ...+.+|.+..... .... ..+ ........+.+..++. +++...
T Consensus 211 --~v~~~~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 211 --GVCSLEFDRKDISMNKLVATSL--------EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG 280 (357)
T ss_dssp --CEEEEEESCSSSSCCEEEEEES--------TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred --ceEEEEcCCCCCCCCEEEEECC--------CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC
Confidence 22333333 5666655554 67899998875422 1111 111 1122244455666666 444443
Q ss_pred C-eEEEEeCCCCc
Q 045675 323 D-QFFLFNPKTKR 334 (382)
Q Consensus 323 ~-~~~~yd~~t~~ 334 (382)
+ .+.+||+++..
T Consensus 281 dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 281 AGGLHLWKYEYPI 293 (357)
T ss_dssp TSEEEEEEEECCS
T ss_pred CCcEEEeecCCCc
Confidence 4 88889887654
No 237
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=36.49 E-value=2e+02 Score=24.59 Aligned_cols=186 Identities=11% Similarity=0.068 Sum_probs=93.4
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC--CeeeecCC-
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG--KWKEVAAG- 197 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~--~W~~~~~~- 197 (382)
..++++|+.|++....-..... . ...++.+|+..+ ..| .. .....+.+|+..+. .=......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~-----~---~p~gia~d~~g~-l~v---~d---~~~~~v~~~~~~g~~~~~~~~~~~~ 133 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLF-----Y---LPHGLSIDTDGN-YWV---TD---VALHQVFKLDPHSKEGPLLILGRSM 133 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTC-----S---SEEEEEECTTSC-EEE---EE---TTTTEEEEECTTCSSCCSEEESBTT
T ss_pred CcEEEEECCCCeEEeccCCCcc-----C---CceEEEECCCCC-EEE---EE---CCCCEEEEEeCCCCeEEEEEecccC
Confidence 3699999998886542221110 0 234777887554 222 11 12347888887654 11222211
Q ss_pred -CC--eeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCceeeEeCCCCCC-----C--CCeeeEEEe-C-
Q 045675 198 -TG--SCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELP-----T--DCYVKALSY-D- 262 (382)
Q Consensus 198 -~~--~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~-----~--~~~~~l~~~-~- 262 (382)
.. .... ....++.+ +|.+|+..... ...|..||...+....+..+... . .....++.. +
T Consensus 134 ~~g~~~~~~-~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~ 207 (329)
T 3fvz_A 134 QPGSDQNHF-CQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHL 207 (329)
T ss_dssp BCCCSTTCC-SSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTT
T ss_pred CCCCCcccc-CCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCC
Confidence 00 0000 01133333 68888877422 24899999776655555322111 0 123345543 4
Q ss_pred CeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCCc---ccceEEee------CCcEEEEEcC--eEEEEeCC
Q 045675 263 QSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFERI---AWPVGSFR------DSKIIMKSVD--QFFLFNPK 331 (382)
Q Consensus 263 g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~~---~~~~~~~~------~g~l~l~~~~--~~~~yd~~ 331 (382)
|.|++.... ...+.+|..+.. ..+..+..... ...+.+.. +|.+++.... .+..+|+.
T Consensus 208 g~l~v~d~~--------~~~I~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~ 276 (329)
T 3fvz_A 208 DQLCVADRE--------NGRIQCFKTDTK---EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS 276 (329)
T ss_dssp TEEEEEETT--------TTEEEEEETTTC---CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT
T ss_pred CEEEEEECC--------CCEEEEEECCCC---cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC
Confidence 888887765 678888887733 22333322211 11122222 3333322222 78899988
Q ss_pred CCcEEEE
Q 045675 332 TKRNFIL 338 (382)
Q Consensus 332 t~~~~~v 338 (382)
+++....
T Consensus 277 ~g~~~~~ 283 (329)
T 3fvz_A 277 SGEIIDV 283 (329)
T ss_dssp TCCEEEE
T ss_pred CCeEEEE
Confidence 8875544
No 238
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=36.21 E-value=61 Score=24.33 Aligned_cols=19 Identities=5% Similarity=0.039 Sum_probs=15.3
Q ss_pred ceeEEEEcccccceeccCC
Q 045675 120 GMAFVLWNPATNEFKGLPT 138 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~ 138 (382)
...++.+||.|++|+.+..
T Consensus 17 rA~Vm~~Dd~tk~WlP~gg 35 (130)
T 3syx_A 17 RAVVMTRDDSSGGWLPLGG 35 (130)
T ss_dssp EEEEEEECSSSSCEEESSS
T ss_pred EEEeeeEcCCCCceEeCCC
Confidence 3478999999999887654
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=36.18 E-value=2e+02 Score=24.29 Aligned_cols=95 Identities=18% Similarity=0.253 Sum_probs=50.6
Q ss_pred EEECceEEEEeecccccccccEEEEEECC-CceeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEE
Q 045675 210 VAVKGVLHWIANGIGVLVNEKFVVSYDMN-LELFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWV 287 (382)
Q Consensus 210 v~~~G~lywl~~~~~~~~~~~~i~~fD~~-~~~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~ 287 (382)
+..+|.+|.-...+ .|.+||.. ...|+. ..+... ...+... +|.|++.... . .|+.
T Consensus 104 ~~~~~~l~v~t~~~-------~l~~~d~~g~~~~~~-~~~~~~---~~~~~~~~~g~l~vgt~~---------~--~l~~ 161 (330)
T 3hxj_A 104 TIFEDILYVTSMDG-------HLYAINTDGTEKWRF-KTKKAI---YATPIVSEDGTIYVGSND---------N--YLYA 161 (330)
T ss_dssp EEETTEEEEECTTS-------EEEEECTTSCEEEEE-ECSSCC---CSCCEECTTSCEEEECTT---------S--EEEE
T ss_pred eEECCEEEEEecCC-------EEEEEcCCCCEEEEE-cCCCce---eeeeEEcCCCEEEEEcCC---------C--EEEE
Confidence 33477776543333 89999998 334433 333221 1222333 6777664332 2 3445
Q ss_pred ECCCCC---eeEEEEeecCCcccceEEeeCCcEEEEEcCeEEEEeCC
Q 045675 288 MNEGKG---WTRTFNTAFERIAWPVGSFRDSKIIMKSVDQFFLFNPK 331 (382)
Q Consensus 288 l~~~~~---W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~~~~~yd~~ 331 (382)
++.. + |... .+. .....+.+..+|.|++.. ..++.||..
T Consensus 162 ~d~~-g~~~~~~~--~~~-~~~~~~~~d~~g~l~v~t-~~l~~~d~~ 203 (330)
T 3hxj_A 162 INPD-GTEKWRFK--TND-AITSAASIGKDGTIYFGS-DKVYAINPD 203 (330)
T ss_dssp ECTT-SCEEEEEE--CSS-CCCSCCEECTTCCEEEES-SSEEEECTT
T ss_pred ECCC-CCEeEEEe--cCC-CceeeeEEcCCCEEEEEe-CEEEEECCC
Confidence 5544 3 6543 221 223334444567788888 889999943
No 240
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=35.32 E-value=58 Score=23.96 Aligned_cols=41 Identities=7% Similarity=0.093 Sum_probs=23.6
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEe-----eCCCCCeEEEEEE
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGF-----NQDTNDYVLVRIV 171 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~-----d~~~~~ykvv~~~ 171 (382)
..++.+||.|+.|+....... ..+.+.+ |...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~g~l----------s~v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 11 AVVMTRDDSSGGWLQLGGGGL----------SSVTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEEECSSSSCEEEGGGCCC----------EEEEEECC---------CCEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCCCc----------ccEEEEEecCcCCCCCCEEEEEEEE
Confidence 478999999999976543321 1222232 4556789999875
No 241
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=34.85 E-value=4.2e+02 Score=27.69 Aligned_cols=181 Identities=10% Similarity=0.042 Sum_probs=86.5
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
...+.|||..|++... ++.... ....+.+.+..+...++... .+..+.+|+..++.-...-...
T Consensus 678 d~~v~vwd~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~l~sg~-----~d~~v~vwd~~~~~~~~~~~~h 742 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYDEHSE----------QVNCCHFTNKSNHLLLATGS-----NDFFLKLWDLNQKECRNTMFGH 742 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS----------CEEEEEECSSSSCCEEEEEE-----TTSCEEEEETTSSSEEEEECCC
T ss_pred CCeEEEEECCCCceEEEEcCCCC----------cEEEEEEecCCCceEEEEEe-----CCCeEEEEECCCcchhheecCC
Confidence 4589999999887544 222111 13356666655544444433 2347888988877533221111
Q ss_pred CeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceee-EeCCCCCC----------CCCeeeEE-EeCCeEE
Q 045675 199 GSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFW-RTAMPELP----------TDCYVKAL-SYDQSLA 266 (382)
Q Consensus 199 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~-~i~~P~~~----------~~~~~~l~-~~~g~L~ 266 (382)
..... .-...-+|.....++.+ ..|..+|+.+..-. .+..+... ......+. .-+|+..
T Consensus 743 ~~~v~---~~~~sp~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 743 TNSVN---HCRFSPDDELLASCSAD------GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp SSCEE---EEEECSSTTEEEEEESS------SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred CCCEE---EEEEecCCCEEEEEECC------CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 10000 01112245443333332 47888888765432 22221110 00001111 2245544
Q ss_pred EEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee--cCCcccceEEeeCCcEEEEEc-C-eEEEEeCCCCcEE
Q 045675 267 LAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA--FERIAWPVGSFRDSKIIMKSV-D-QFFLFNPKTKRNF 336 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~--~~~~~~~~~~~~~g~l~l~~~-~-~~~~yd~~t~~~~ 336 (382)
++.. ...+.+|.+... + ....+. -..-...+.+..++.+++... + .+.+||.++++..
T Consensus 814 ~~~~---------~~~v~~~d~~~~-~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 814 IVAA---------KNKVLLFDIHTS-G--LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV 875 (1249)
T ss_dssp EEEE---------TTEEEEEETTTC-C--EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE
T ss_pred EEEc---------CCcEEEEEecCC-C--ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 4433 346777877665 2 222221 122244455566666554443 3 7888888876543
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=34.47 E-value=1.9e+02 Score=24.98 Aligned_cols=62 Identities=11% Similarity=0.018 Sum_probs=34.4
Q ss_pred ceEEE--CceEEEEeecccccccccEEEEEECCCce-eeEeCCCCCCC--C-CeeeEEEe--CCeEEEEEe
Q 045675 208 DAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLEL-FWRTAMPELPT--D-CYVKALSY--DQSLALAVY 270 (382)
Q Consensus 208 ~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~-~~~i~~P~~~~--~-~~~~l~~~--~g~L~~~~~ 270 (382)
.++.+ +|.|||+.... .......|+.||+.+.+ ...+.+|.... . ..-.++.. +|.+++...
T Consensus 70 ~gv~~d~~g~L~v~D~g~-~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGN-QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp EEEEECSSSEEEEEECHH-HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred eEEEEcCCCcEEEEcCCC-CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 34444 48899886431 00012489999999877 45667664321 1 12334444 466666654
No 243
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=34.30 E-value=1.3e+02 Score=27.02 Aligned_cols=34 Identities=12% Similarity=0.290 Sum_probs=27.0
Q ss_pred CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecC
Q 045675 262 DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFE 303 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~ 303 (382)
...+|++... ...+.+|...+...|+++|+....
T Consensus 52 ~~~~~~~~~~--------~~~v~lw~~~~~~~~~~~~~~~~~ 85 (356)
T 2w18_A 52 CKEPCIITAC--------EDVVSLWKALDAWQWEKLYTWHFA 85 (356)
T ss_dssp -CEEEEEEEE--------SSEEEEEEESSSSBEEEEEEEECC
T ss_pred CCccEEEEec--------cceEEEcccCCCccceeeEEEecc
Confidence 4568999887 789999999987349999988543
No 244
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=33.73 E-value=2.4e+02 Score=24.50 Aligned_cols=50 Identities=8% Similarity=-0.010 Sum_probs=25.7
Q ss_pred CCeEEEEEECCCCCeeEEEEeecCCcccceEEeeCCcEEEEEcCeEEEEeCCCC
Q 045675 280 SNRFELWVMNEGKGWTRTFNTAFERIAWPVGSFRDSKIIMKSVDQFFLFNPKTK 333 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~~~~~yd~~t~ 333 (382)
...+.||-+... ..+..+....-..-+.+. ...+++..++.+.+||++++
T Consensus 80 d~~v~iWd~~~~---~~~~~~~~~~~v~~v~~~-~~~~~~~~~~~i~i~d~~~~ 129 (355)
T 3vu4_A 80 KEVVHIWDDVKK---QDVSRIKVDAPVKDLFLS-REFIVVSYGDVISVFKFGNP 129 (355)
T ss_dssp TTEEEEEETTTT---EEEEEEECSSCEEEEEEC-SSEEEEEETTEEEEEESSTT
T ss_pred ccEEEEEECCCC---cEEEEEECCCceEEEEEc-CCEEEEEEcCEEEEEECCCC
Confidence 458899987765 333344332222222222 12244445557777777665
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=33.44 E-value=2.2e+02 Score=24.09 Aligned_cols=193 Identities=8% Similarity=-0.096 Sum_probs=98.1
Q ss_pred cCceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEEC
Q 045675 107 CNGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYST 186 (382)
Q Consensus 107 ~~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss 186 (382)
.+|-|++.+.. ...++.+||.++....++... ...++.+++..+ .. |+-.. .....+..|+.
T Consensus 41 ~~g~lyv~d~~--~~~I~~~d~~g~~~~~~~~~~-----------~p~gia~~~dG~-l~-vad~~---~~~~~v~~~d~ 102 (306)
T 2p4o_A 41 PDGTIFVTNHE--VGEIVSITPDGNQQIHATVEG-----------KVSGLAFTSNGD-LV-ATGWN---ADSIPVVSLVK 102 (306)
T ss_dssp TTSCEEEEETT--TTEEEEECTTCCEEEEEECSS-----------EEEEEEECTTSC-EE-EEEEC---TTSCEEEEEEC
T ss_pred CCCCEEEEeCC--CCeEEEECCCCceEEEEeCCC-----------CceeEEEcCCCc-EE-EEecc---CCcceEEEEcC
Confidence 36777666643 457888999876543333211 234677777643 32 22211 11224666777
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeEe---C-----CCCCCCCCeeeE
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRT---A-----MPELPTDCYVKA 258 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i---~-----~P~~~~~~~~~l 258 (382)
.+++.+.....+..... . ..++..+|.+|..... ...|..+|..+...+.. . .+.......-.+
T Consensus 103 ~~g~~~~~~~~~~~~~~-~-g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFL-N-GITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp TTSCEEEEEECTTCSCE-E-EEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred CCCeEEEEEeCCCcccc-C-cccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc
Confidence 77776654333211111 0 0112234455654322 24899999876432221 0 111110112224
Q ss_pred EEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC----eeEEEEeecCCcccceEEeeCCcEEEEEcC--eEEEEeCCC
Q 045675 259 LSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG----WTRTFNTAFERIAWPVGSFRDSKIIMKSVD--QFFLFNPKT 332 (382)
Q Consensus 259 ~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~----W~~~~~i~~~~~~~~~~~~~~g~l~l~~~~--~~~~yd~~t 332 (382)
...++.|++.... ...+.++.++.. + ...... . ..-.-+++..+|.|++.... ++..||++
T Consensus 175 s~dg~~lyv~d~~--------~~~I~~~~~~~~-g~~~~~~~~~~--~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~- 241 (306)
T 2p4o_A 175 KRFGNFLYVSNTE--------KMLLLRIPVDST-DKPGEPEIFVE--Q-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD- 241 (306)
T ss_dssp EEETTEEEEEETT--------TTEEEEEEBCTT-SCBCCCEEEEE--S-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-
T ss_pred CcCCCEEEEEeCC--------CCEEEEEEeCCC-CCCCccEEEec--c-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-
Confidence 3334568877665 566777766642 2 111111 1 12344666777888877754 89999997
Q ss_pred CcEEEE
Q 045675 333 KRNFIL 338 (382)
Q Consensus 333 ~~~~~v 338 (382)
++...+
T Consensus 242 G~~~~~ 247 (306)
T 2p4o_A 242 RSTTII 247 (306)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 444443
No 246
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=33.24 E-value=2.4e+02 Score=24.45 Aligned_cols=62 Identities=5% Similarity=0.004 Sum_probs=39.5
Q ss_pred CCeEEEEEecCCCccCCCCCe-EEEEEECCCCCeeEEEEee---cCCcccceEEeeCCcEEEEE-cC-eEEEEeCCCCc
Q 045675 262 DQSLALAVYPGLGFRSRLSNR-FELWVMNEGKGWTRTFNTA---FERIAWPVGSFRDSKIIMKS-VD-QFFLFNPKTKR 334 (382)
Q Consensus 262 ~g~L~~~~~~~~~~~~~~~~~-~~iW~l~~~~~W~~~~~i~---~~~~~~~~~~~~~g~l~l~~-~~-~~~~yd~~t~~ 334 (382)
+|++.+.... ... +.||.+... ..+..+. -..-+.-+.+..+|..++.. .+ .+.+||+++..
T Consensus 206 ~g~~l~s~s~--------d~~~v~iwd~~~~---~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 206 KSDMVATCSQ--------DGTIIRVFKTEDG---VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSSEEEEEET--------TCSEEEEEETTTC---CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEeC--------CCCEEEEEECCCC---cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 6666555554 566 999998765 4455554 22234556666777755444 44 89999998764
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=32.85 E-value=3.7e+02 Score=26.52 Aligned_cols=116 Identities=11% Similarity=0.082 Sum_probs=61.1
Q ss_pred CceEEEEeecccccccccEEEEEECCC-ceeeE-eCCCCCCCCCeeeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECC
Q 045675 213 KGVLHWIANGIGVLVNEKFVVSYDMNL-ELFWR-TAMPELPTDCYVKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNE 290 (382)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~i~~fD~~~-~~~~~-i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~ 290 (382)
++.+|+++..+.. ....|...|+.+ +.|+. +-.+ ........+...++.|.+.... ....+||.++-
T Consensus 330 g~~l~~~t~~~~a--~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~~~~lv~~~~~--------~g~~~l~~~dl 398 (751)
T 2xe4_A 330 TSHLVILTNEGGA--VNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVRSNYLVVAGRR--------AGLTRIWTMMA 398 (751)
T ss_dssp TTEEEEEECTTTC--TTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEECSSEEEEEEEE--------TTEEEEEEEEC
T ss_pred CCEEEEEeCCCCC--CCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEECCEEEEEEEe--------CCEEEEEEEec
Confidence 6788888775410 135899999986 67875 4222 2110112233456677666654 34555666542
Q ss_pred C--CC-ee--E-EEEeecCCcccceEEe------eCC-cEEEEEcC-----eEEEEeCCCCcEEEEe
Q 045675 291 G--KG-WT--R-TFNTAFERIAWPVGSF------RDS-KIIMKSVD-----QFFLFNPKTKRNFILP 339 (382)
Q Consensus 291 ~--~~-W~--~-~~~i~~~~~~~~~~~~------~~g-~l~l~~~~-----~~~~yd~~t~~~~~v~ 339 (382)
. ++ |. + ...|.+.......++. .++ .+++.... .++.||+.+++.+.+.
T Consensus 399 ~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 399 DSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp CTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred ccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 0 00 21 1 3344443322223331 133 46555433 7999999988876664
No 248
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=31.80 E-value=2.4e+02 Score=24.04 Aligned_cols=59 Identities=10% Similarity=0.117 Sum_probs=35.9
Q ss_pred CCeEEEEEECCCC----C-eeEEEEeec--CCcccceEEeeCCcEEEEEcC-eEEEEeCCCCcEEEE
Q 045675 280 SNRFELWVMNEGK----G-WTRTFNTAF--ERIAWPVGSFRDSKIIMKSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 280 ~~~~~iW~l~~~~----~-W~~~~~i~~--~~~~~~~~~~~~g~l~l~~~~-~~~~yd~~t~~~~~v 338 (382)
...+.||.+.... . |.....++. ...+..+.+..++.|+....+ .+.+||.++++++.+
T Consensus 220 D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 220 DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEE
Confidence 6789999885421 1 776665542 122333444444445555555 889999988877655
No 249
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=31.54 E-value=3e+02 Score=25.04 Aligned_cols=192 Identities=13% Similarity=0.034 Sum_probs=93.3
Q ss_pred CceEEEeeCCCCceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCC-EEEEEEC
Q 045675 108 NGLLCLDVSSAFGMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDA-IAEVYST 186 (382)
Q Consensus 108 ~Gll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~-~~~vyss 186 (382)
+|.|.+.+.. ..+..++|.+++...+..... ...++.+|+..+ ..|.-. ...... .+..+..
T Consensus 152 ~g~Lyv~D~~---~~I~~id~~~g~v~~~~~~~~----------~P~giavd~dG~-lyVad~---~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 152 YDDLYWVGQR---DAFRHVDFVNQYVDIKTTNIG----------QCADVNFTLNGD-MVVVDD---QSSDTNTGIYLFTR 214 (433)
T ss_dssp TCEEEEECBT---SCEEEEETTTTEEEEECCCCS----------CEEEEEECTTCC-EEEEEC---CSCTTSEEEEEECG
T ss_pred CCEEEEEeCC---CCEEEEECCCCEEEEeecCCC----------CccEEEECCCCC-EEEEcC---CCCcccceEEEEEC
Confidence 5777766552 478888998888776654221 234778888765 222211 111111 2333332
Q ss_pred CCCCeeeecCCCCeeEEeCCcceEEE---CceEEEEeecccccccccEEEEEECCCcee-eEe-CCCCCCCCCeeeEEEe
Q 045675 187 STGKWKEVAAGTGSCVIYGGQDAVAV---KGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRT-AMPELPTDCYVKALSY 261 (382)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i-~~P~~~~~~~~~l~~~ 261 (382)
.+.|....... . .. . ..++.+ +|.+|+..... ..|..||+.+.+. ..+ ...... ....++..
T Consensus 215 -~~~~~~~~~~~-~-~~-~-P~giavd~~~G~lyv~d~~~------~~V~~~d~~~g~~~~~~~~~~~~~--~~~~ia~d 281 (433)
T 4hw6_A 215 -ASGFTERLSLC-N-AR-G-AKTCAVHPQNGKIYYTRYHH------AMISSYDPATGTLTEEEVMMDTKG--SNFHIVWH 281 (433)
T ss_dssp -GGTTCCEEEEE-E-CS-S-BCCCEECTTTCCEEECBTTC------SEEEEECTTTCCEEEEEEECSCCS--SCEEEEEC
T ss_pred -CCCeecccccc-c-cC-C-CCEEEEeCCCCeEEEEECCC------CEEEEEECCCCeEEEEEeccCCCC--CcccEEEe
Confidence 23332110000 0 00 1 122333 68898876543 4899999986665 322 222111 22234443
Q ss_pred -CCe-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEe-ec-------------CCcccceEEe-----------e
Q 045675 262 -DQS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNT-AF-------------ERIAWPVGSF-----------R 313 (382)
Q Consensus 262 -~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i-~~-------------~~~~~~~~~~-----------~ 313 (382)
+|. |+++... ...+..+.++...+ ......+ .. ..+..|.++. .
T Consensus 282 pdG~~LYvad~~--------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~ 353 (433)
T 4hw6_A 282 PTGDWAYIIYNG--------KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED 353 (433)
T ss_dssp TTSSEEEEEETT--------TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC
T ss_pred CCCCEEEEEeCC--------CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC
Confidence 554 7777654 44555444543212 1111111 00 1123454333 3
Q ss_pred CCcEEEEEcC--eEEEEeCCCCcEEEE
Q 045675 314 DSKIIMKSVD--QFFLFNPKTKRNFIL 338 (382)
Q Consensus 314 ~g~l~l~~~~--~~~~yd~~t~~~~~v 338 (382)
+|.||+.... ++..+|+ ++.+..+
T Consensus 354 ~g~lyvaD~~n~~I~~~~~-~G~v~t~ 379 (433)
T 4hw6_A 354 EYDFYFCDRDSHTVRVLTP-EGRVTTY 379 (433)
T ss_dssp CEEEEEEETTTTEEEEECT-TSEEEEE
T ss_pred CCcEEEEECCCCEEEEECC-CCCEEEE
Confidence 4568887765 8889997 4555554
No 250
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.46 E-value=3.9e+02 Score=26.36 Aligned_cols=120 Identities=10% Similarity=0.185 Sum_probs=65.0
Q ss_pred EEECceEEEEeeccc----ccccccEEEEEECCC--------ceeeEeCCCCCCCCCeeeEEEeCCeEEEEEecCCCccC
Q 045675 210 VAVKGVLHWIANGIG----VLVNEKFVVSYDMNL--------ELFWRTAMPELPTDCYVKALSYDQSLALAVYPGLGFRS 277 (382)
Q Consensus 210 v~~~G~lywl~~~~~----~~~~~~~i~~fD~~~--------~~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~ 277 (382)
.+.+|.+|......- .......|++.|+.+ ..|+.+-.|.... .-..+...++.|.+.... .
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~--~--- 369 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE-VFNFISTTKDRVFLATYD--N--- 369 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE-EEEEEEECSSCEEEEEEE--T---
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC-eEEEEEEECCEEEEEEEE--C---
Confidence 366888888653320 001235799999865 4688765554321 223445567777776665 2
Q ss_pred CCCCeEEEEEECCCCCeeEEEEeecCCc--ccceEEeeCC-cEEEEEcC-----eEEEEeCCCCcEEEE
Q 045675 278 RLSNRFELWVMNEGKGWTRTFNTAFERI--AWPVGSFRDS-KIIMKSVD-----QFFLFNPKTKRNFIL 338 (382)
Q Consensus 278 ~~~~~~~iW~l~~~~~W~~~~~i~~~~~--~~~~~~~~~g-~l~l~~~~-----~~~~yd~~t~~~~~v 338 (382)
....+.++.++.. .|.....++++.. ........++ .+++.... .++.||++ ++.+.+
T Consensus 370 -~~~~l~~~~~~~g-~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l 435 (711)
T 4hvt_A 370 -VVAKVVTFTLENE-QWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKII 435 (711)
T ss_dssp -TEEEEEEECEETT-EECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEE
T ss_pred -CEEEEEEEECCCC-ceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEE
Confidence 2445555554433 3753322544432 2222222233 46655543 89999998 666655
No 251
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=30.90 E-value=3.8e+02 Score=26.01 Aligned_cols=164 Identities=13% Similarity=0.075 Sum_probs=83.9
Q ss_pred EEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCC------C--CeeeecCCCCeeEEeCCcceEEE-CceEEEEeecccc
Q 045675 155 GFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTST------G--KWKEVAAGTGSCVIYGGQDAVAV-KGVLHWIANGIGV 225 (382)
Q Consensus 155 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t------~--~W~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~ 225 (382)
+..+.|+. .|-++.... .......+.+++..+ + .++.+....... ...+.. ++.+|+.+..+.
T Consensus 237 ~~~~SpDg-~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~s~dg~~l~~~s~~~~- 308 (710)
T 2xdw_A 237 GAELSDDG-RYVLLSIRE-GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-----YDYVTNEGTVFTFKTNRHS- 308 (710)
T ss_dssp EEEECTTS-CEEEEEEEC-SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-----EEEEEEETTEEEEEECTTC-
T ss_pred EEEEcCCC-CEEEEEEEc-cCCCccEEEEEECcccccccCCccceEEeeCCCCcE-----EEEEeccCCEEEEEECCCC-
Confidence 45555543 454444332 111245788888765 4 576665432111 112333 456777765441
Q ss_pred cccccEEEEEECCCc---eeeEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEee
Q 045675 226 LVNEKFVVSYDMNLE---LFWRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA 301 (382)
Q Consensus 226 ~~~~~~i~~fD~~~~---~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~ 301 (382)
....|..+|+.+. .|+.+..+... .....+... ++.|.+.... ....+||.++-..| .....+.
T Consensus 309 --~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~~~--------~g~~~l~~~~~~~g-~~~~~l~ 376 (710)
T 2xdw_A 309 --PNYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCYLH--------DVKNTLQLHDLATG-ALLKIFP 376 (710)
T ss_dssp --TTCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEEEE--------TTEEEEEEEETTTC-CEEEEEC
T ss_pred --CCCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEEEE--------CCEEEEEEEECCCC-CEEEecC
Confidence 1358999999875 47766433221 012223444 6777776665 34445555543112 2334454
Q ss_pred cCC-cccceEEeeCCc-EEEEEcC-----eEEEEeCCCCc--EEEE
Q 045675 302 FER-IAWPVGSFRDSK-IIMKSVD-----QFFLFNPKTKR--NFIL 338 (382)
Q Consensus 302 ~~~-~~~~~~~~~~g~-l~l~~~~-----~~~~yd~~t~~--~~~v 338 (382)
+.. ....+....++. +++.... .++.||+++++ .+.+
T Consensus 377 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 377 LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 431 122223333454 6555443 89999999887 5544
No 252
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=30.82 E-value=2.7e+02 Score=24.83 Aligned_cols=44 Identities=2% Similarity=-0.115 Sum_probs=29.3
Q ss_pred eeEEEEeecCCcccceEEeeCCc-EEEEEc--C-eEEEEeCCCCcEEE
Q 045675 294 WTRTFNTAFERIAWPVGSFRDSK-IIMKSV--D-QFFLFNPKTKRNFI 337 (382)
Q Consensus 294 W~~~~~i~~~~~~~~~~~~~~g~-l~l~~~--~-~~~~yd~~t~~~~~ 337 (382)
...+.+|++.....-+.+..+|. +++... + .|-++|+++++..+
T Consensus 304 ~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 304 GQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp CCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred CeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 35666676544334455566776 777765 2 99999999987553
No 253
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=29.59 E-value=2.8e+02 Score=24.17 Aligned_cols=180 Identities=14% Similarity=0.126 Sum_probs=91.6
Q ss_pred ceeEEEEcccccceeccCCCC--CccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCC--Ceeeec
Q 045675 120 GMAFVLWNPATNEFKGLPTPS--LTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTG--KWKEVA 195 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~--~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~--~W~~~~ 195 (382)
+..+.+||..+++....-... ..+.. ....+.+.+..+.+.+.+- .+..+.+|+.+.. .-+...
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~~l~sgs------~D~~v~~wd~~~~~~~~~~~~ 246 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTA------DVLSLSINSLNANMFISGS------CDTTVRLWDLRITSRAVRTYH 246 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCS------CEEEEEECSSSCCEEEEEE------TTSCEEEEETTTTCCCCEEEC
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCcc------CeEEEEeecCCCCEEEEEE------CCCeEEEEECCCCCcceEEEC
Confidence 458999999998765432111 11111 2334555554444433322 3347888887632 111111
Q ss_pred CCCCeeEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCC----CeeeEE-EeCCeEEE
Q 045675 196 AGTGSCVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTD----CYVKAL-SYDQSLAL 267 (382)
Q Consensus 196 ~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~----~~~~l~-~~~g~L~~ 267 (382)
.... .. .++.+ +|.....+..+ ..|-.+|+.+..-.. +........ ....+. ..+|++.+
T Consensus 247 ~h~~--~v----~~v~~~p~~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 314 (380)
T 3iz6_a 247 GHEG--DI----NSVKFFPDGQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF 314 (380)
T ss_dssp CCSS--CC----CEEEECTTSSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE
T ss_pred CcCC--Ce----EEEEEecCCCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE
Confidence 1100 01 12222 45544433332 478889998765433 332221111 112233 23677766
Q ss_pred EEecCCCccCCCCCeEEEEEECCCCCeeEEEEee-c----CCcccceEEeeCCcEEEEEc-C-eEEEEeCCCCc
Q 045675 268 AVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTA-F----ERIAWPVGSFRDSKIIMKSV-D-QFFLFNPKTKR 334 (382)
Q Consensus 268 ~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~-~----~~~~~~~~~~~~g~l~l~~~-~-~~~~yd~~t~~ 334 (382)
++.. ...+.||.+... .....+. + ...+.-+.+..+|..++... + .+.+||+.+.+
T Consensus 315 ~g~~--------dg~i~vwd~~~~---~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 315 AGYS--------NGDCYVWDTLLA---EMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EECT--------TSCEEEEETTTC---CEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEC--------CCCEEEEECCCC---ceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 6654 678999987665 2333331 1 11245566677787665554 4 78889887653
No 254
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=29.25 E-value=3.1e+02 Score=24.47 Aligned_cols=184 Identities=9% Similarity=0.014 Sum_probs=85.9
Q ss_pred ceeEEEEcccccce--eccCCCC-C-ccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCC-eeee
Q 045675 120 GMAFVLWNPATNEF--KGLPTPS-L-TESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGK-WKEV 194 (382)
Q Consensus 120 ~~~~~V~NP~T~~~--~~LP~~~-~-~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~-W~~~ 194 (382)
...+.||+..+++. ..+.+.. . .+ .. ....+.+.|..+.+.+.+. ....+.+|+.+++. .+..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h----~~--~v~~v~~~p~~~~~l~s~~------~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGH----TA--VVEDVAWHLLHESLFGSVA------DDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCC----SS--CEEEEEECSSCTTEEEEEE------TTSEEEEEETTCSCSSSCS
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCC----CC--CEeeeEEeCCCCCEEEEEe------CCCeEEEEECCCCCCCcce
Confidence 45899999877321 1111110 0 11 11 2345677775544443332 23489999998752 1111
Q ss_pred cCC-CCeeEEeCCcceEEE--Cce-EEEEeecccccccccEEEEEECCCce--eeEeCCCCCCCCCeeeEEEe-CC-eEE
Q 045675 195 AAG-TGSCVIYGGQDAVAV--KGV-LHWIANGIGVLVNEKFVVSYDMNLEL--FWRTAMPELPTDCYVKALSY-DQ-SLA 266 (382)
Q Consensus 195 ~~~-~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~i~~fD~~~~~--~~~i~~P~~~~~~~~~l~~~-~g-~L~ 266 (382)
... ...... .++.+ +|. ++..+..+ ..|..+|+.+.. ...+..... ....+... +| .+.
T Consensus 271 ~~~~~~~~~v----~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~h~~---~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 271 HTVDAHTAEV----NCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFESHKD---EIFQVQWSPHNETIL 337 (430)
T ss_dssp EEEECCSSCE----EEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEECCSS---CEEEEEECSSCTTEE
T ss_pred eEeecCCCCe----EEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeecCCC---CEEEEEECCCCCCEE
Confidence 110 000001 22222 243 45444433 478999997632 222221111 22233322 34 344
Q ss_pred EEEecCCCccCCCCCeEEEEEECCCCC-----------eeEEEEeec-CCcccceEEeeCCc-EEEEEc-C-eEEEEeCC
Q 045675 267 LAVYPGLGFRSRLSNRFELWVMNEGKG-----------WTRTFNTAF-ERIAWPVGSFRDSK-IIMKSV-D-QFFLFNPK 331 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~iW~l~~~~~-----------W~~~~~i~~-~~~~~~~~~~~~g~-l~l~~~-~-~~~~yd~~ 331 (382)
+.... ...+.||.+..... -..+..... .....-+.+..++. +++... + .+.+|++.
T Consensus 338 ~s~~~--------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 338 ASSGT--------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEEET--------TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEeC--------CCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 44443 56889998875211 123333321 11244455556666 554443 3 78888887
Q ss_pred CCcEE
Q 045675 332 TKRNF 336 (382)
Q Consensus 332 t~~~~ 336 (382)
++.+.
T Consensus 410 ~~~~~ 414 (430)
T 2xyi_A 410 ENVYN 414 (430)
T ss_dssp HHHHC
T ss_pred ccccc
Confidence 65443
No 255
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=28.63 E-value=2.7e+02 Score=23.67 Aligned_cols=52 Identities=12% Similarity=0.129 Sum_probs=27.3
Q ss_pred CCeEEEEEECCCCCeeEEEEeec--CC-cccceEEee--CCcEEE-EEcC-eEEEEeCCC
Q 045675 280 SNRFELWVMNEGKGWTRTFNTAF--ER-IAWPVGSFR--DSKIIM-KSVD-QFFLFNPKT 332 (382)
Q Consensus 280 ~~~~~iW~l~~~~~W~~~~~i~~--~~-~~~~~~~~~--~g~l~l-~~~~-~~~~yd~~t 332 (382)
...+.||..... .|........ .. ....+.+.. ++.++. ...+ .+..||+++
T Consensus 270 dg~v~iw~~~~~-~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 270 DGVLAVYEEVDG-EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TSCEEEEEEETT-EEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCEEEEEEcCCC-ceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 678999998754 4766554421 11 133344444 455444 4444 788888865
No 256
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=27.75 E-value=2.8e+02 Score=23.45 Aligned_cols=154 Identities=7% Similarity=0.031 Sum_probs=77.2
Q ss_pred EEEEEeeCCC--CCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC-CeeEEeCCcceEEE--CceEEEEeecccccc
Q 045675 153 SLGFGFNQDT--NDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT-GSCVIYGGQDAVAV--KGVLHWIANGIGVLV 227 (382)
Q Consensus 153 ~~~~g~d~~~--~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~-~~~~~~~~~~~v~~--~G~lywl~~~~~~~~ 227 (382)
...+.+.|.. +.+-+.+- .+..+.+|+..++......... ..... ..+.+ +|.....+..+
T Consensus 42 v~~~~~~~~~~~g~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~h~~~v----~~~~~~~~~~~l~s~~~d---- 107 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGS------WANDVRCWEVQDSGQTIPKAQQMHTGPV----LDVCWSDDGSKVFTASCD---- 107 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEE------TTSEEEEEEECTTSCEEEEEEEECSSCE----EEEEECTTSSEEEEEETT----
T ss_pred eEEEEEcCCCCCceEEEEEC------CCCcEEEEEcCCCCceeEEEeccccCCE----EEEEECcCCCEEEEEcCC----
Confidence 3466777765 34443332 2347899998874332211110 00001 11222 55544444333
Q ss_pred cccEEEEEECCCceeeEeCCCCCCCCCeeeEE---EeCCeEEEEEecCCCccCCCCCeEEEEEECCCCCeeEEEEeecCC
Q 045675 228 NEKFVVSYDMNLELFWRTAMPELPTDCYVKAL---SYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKGWTRTFNTAFER 304 (382)
Q Consensus 228 ~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~---~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W~~~~~i~~~~ 304 (382)
..|..+|+.+.+...+..... ....+. ..+|.+.+.... ...+.+|.+... . .+..+....
T Consensus 108 --g~v~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~--------dg~i~vwd~~~~-~--~~~~~~~~~ 171 (368)
T 3mmy_A 108 --KTAKMWDLSSNQAIQIAQHDA---PVKTIHWIKAPNYSCVMTGSW--------DKTLKFWDTRSS-N--PMMVLQLPE 171 (368)
T ss_dssp --SEEEEEETTTTEEEEEEECSS---CEEEEEEEECSSCEEEEEEET--------TSEEEEECSSCS-S--CSEEEECSS
T ss_pred --CcEEEEEcCCCCceeeccccC---ceEEEEEEeCCCCCEEEEccC--------CCcEEEEECCCC-c--EEEEEecCC
Confidence 488999998887655422111 222333 236666655554 678999998765 2 222232222
Q ss_pred cccceEEee-CCcEEEEEcC-eEEEEeCCCCcEEEE
Q 045675 305 IAWPVGSFR-DSKIIMKSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 305 ~~~~~~~~~-~g~l~l~~~~-~~~~yd~~t~~~~~v 338 (382)
....+.. ...+++...+ .+..||+++......
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 205 (368)
T 3mmy_A 172 --RCYCADVIYPMAVVATAERGLIVYQLENQPSEFR 205 (368)
T ss_dssp --CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEE
T ss_pred --CceEEEecCCeeEEEeCCCcEEEEEeccccchhh
Confidence 1122222 2234444444 888999987754433
No 257
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=27.74 E-value=3e+02 Score=23.79 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=53.9
Q ss_pred cEEEEEECCCce------eeEeCCCCCC--CCCeeeEEEe-----CCeE-EEEEecCCCccCCCCCeEEEEEECC-----
Q 045675 230 KFVVSYDMNLEL------FWRTAMPELP--TDCYVKALSY-----DQSL-ALAVYPGLGFRSRLSNRFELWVMNE----- 290 (382)
Q Consensus 230 ~~i~~fD~~~~~------~~~i~~P~~~--~~~~~~l~~~-----~g~L-~~~~~~~~~~~~~~~~~~~iW~l~~----- 290 (382)
..|..+|+.+.. +..+...... ......+... +|.+ .++... ...+.+|.+..
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--------dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV--------KGTTYIWKFHPFADES 162 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET--------TSCEEEEEEESSSSHH
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC--------CCcEEEEeCCcccccc
Confidence 367788887655 5555433210 1123334333 5666 444443 67899999987
Q ss_pred -CCC--eeEEEEeec--------CCcccceEEeeCCcEEEEEcC--eEEEEeCCCCcEE
Q 045675 291 -GKG--WTRTFNTAF--------ERIAWPVGSFRDSKIIMKSVD--QFFLFNPKTKRNF 336 (382)
Q Consensus 291 -~~~--W~~~~~i~~--------~~~~~~~~~~~~g~l~l~~~~--~~~~yd~~t~~~~ 336 (382)
... |.....+.. .....-+.+..++ +++.... .+.+||+++++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL 220 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee
Confidence 322 555444421 1224445566667 5555443 8999999887643
No 258
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=27.37 E-value=2.3e+02 Score=25.11 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=18.8
Q ss_pred CCcEEEEEcC-eEEEEeCCCCcEEEE
Q 045675 314 DSKIIMKSVD-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 314 ~g~l~l~~~~-~~~~yd~~t~~~~~v 338 (382)
+|.||+...+ +++..|++|++..+.
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEE
Confidence 4446666655 999999999987765
No 259
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=26.49 E-value=3.4e+02 Score=24.04 Aligned_cols=132 Identities=11% Similarity=0.164 Sum_probs=64.4
Q ss_pred ceeEEEEcccccceec-cCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCC
Q 045675 120 GMAFVLWNPATNEFKG-LPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGT 198 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 198 (382)
+..+.|||..|++... +..... ....+.|++.. .+-+.+ . .+..+.+|+..+..- +....
T Consensus 129 Dg~i~vwd~~~~~~~~~l~~h~~----------~V~~v~~~~~~-~~l~sg--s----~D~~i~iwd~~~~~~--~~~~~ 189 (410)
T 1vyh_C 129 DATIKVWDYETGDFERTLKGHTD----------SVQDISFDHSG-KLLASC--S----ADMTIKLWDFQGFEC--IRTMH 189 (410)
T ss_dssp SSCEEEEETTTCCCCEEECCCSS----------CEEEEEECTTS-SEEEEE--E----TTSCCCEEETTSSCE--EECCC
T ss_pred CCeEEEEECCCCcEEEEEeccCC----------cEEEEEEcCCC-CEEEEE--e----CCCeEEEEeCCCCce--eEEEc
Confidence 5589999998887543 222111 23356666643 332222 1 234677888765432 11111
Q ss_pred Ce-eEEeCCcceEEE--CceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCeeeEEE-eCCeEEEEEecCC
Q 045675 199 GS-CVIYGGQDAVAV--KGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCYVKALS-YDQSLALAVYPGL 273 (382)
Q Consensus 199 ~~-~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~ 273 (382)
.+ ... .++.+ +|.....++. ...|..+|+.+..... +..... ....+.. .+|.+.+.+..
T Consensus 190 ~h~~~V----~~v~~~p~~~~l~s~s~------D~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~g~~l~s~s~-- 254 (410)
T 1vyh_C 190 GHDHNV----SSVSIMPNGDHIVSASR------DKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSN-- 254 (410)
T ss_dssp CCSSCE----EEEEECSSSSEEEEEET------TSEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEET--
T ss_pred CCCCCE----EEEEEeCCCCEEEEEeC------CCeEEEEECCCCcEEEEEeCCCc---cEEEEEECCCCCEEEEEcC--
Confidence 10 011 11222 4544333333 2478889998765422 221111 1122222 25666555554
Q ss_pred CccCCCCCeEEEEEECCC
Q 045675 274 GFRSRLSNRFELWVMNEG 291 (382)
Q Consensus 274 ~~~~~~~~~~~iW~l~~~ 291 (382)
...+.+|.+...
T Consensus 255 ------D~~v~vwd~~~~ 266 (410)
T 1vyh_C 255 ------DQTVRVWVVATK 266 (410)
T ss_dssp ------TSCEEEEETTTC
T ss_pred ------CCeEEEEECCCC
Confidence 678999987654
No 260
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=26.32 E-value=4.5e+02 Score=25.43 Aligned_cols=198 Identities=8% Similarity=-0.056 Sum_probs=91.4
Q ss_pred eeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeec---------CCCCCEEEEEECCCCCe
Q 045675 121 MAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQ---------ARYDAIAEVYSTSTGKW 191 (382)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~---------~~~~~~~~vyss~t~~W 191 (382)
..++|+|..|++...+...... ..++.+.|+++.+.....-... ......+.+++.+++..
T Consensus 151 ~~i~v~d~~tg~~~~~~~~~~~----------~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~ 220 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLERVK----------FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS 220 (710)
T ss_dssp EEEEEEETTTTEEEEEEEEEEC----------SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG
T ss_pred EEEEEEECCCCCCCcccccCcc----------cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc
Confidence 3799999999987754211110 0123444443332222211100 01233577777777654
Q ss_pred e--eecCCC--CeeEEeCCcceEEECce-EEEEeecccccccccEEEEEECCC------c--eeeEeCCCCCCCCCeeeE
Q 045675 192 K--EVAAGT--GSCVIYGGQDAVAVKGV-LHWIANGIGVLVNEKFVVSYDMNL------E--LFWRTAMPELPTDCYVKA 258 (382)
Q Consensus 192 ~--~~~~~~--~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~i~~fD~~~------~--~~~~i~~P~~~~~~~~~l 258 (382)
. .+-... ..... ...+.-+|. +.+....... ....|...|+.+ . .+..+..+... ....+
T Consensus 221 ~~~~v~~~~~~~~~~~---~~~~SpDg~~l~~~~~~~~~--~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~--~~~~~ 293 (710)
T 2xdw_A 221 EDILCAEFPDEPKWMG---GAELSDDGRYVLLSIREGCD--PVNRLWYCDLQQESNGITGILKWVKLIDNFEG--EYDYV 293 (710)
T ss_dssp GCEEEECCTTCTTCEE---EEEECTTSCEEEEEEECSSS--SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS--CEEEE
T ss_pred cceEEeccCCCCeEEE---EEEEcCCCCEEEEEEEccCC--CccEEEEEECcccccccCCccceEEeeCCCCc--EEEEE
Confidence 3 221111 11111 123334554 3333332211 124777888875 3 56666444332 22223
Q ss_pred EEeCCeEEEEEecCCCccCCCCCeEEEEEECCCC--CeeEEEEeecCCcccceEEeeCCcEEEEEc-C---eEEEEeCCC
Q 045675 259 LSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGK--GWTRTFNTAFERIAWPVGSFRDSKIIMKSV-D---QFFLFNPKT 332 (382)
Q Consensus 259 ~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~--~W~~~~~i~~~~~~~~~~~~~~g~l~l~~~-~---~~~~yd~~t 332 (382)
...++.|++.... . .....+.+|-++... .|..+..-.-......+.+.+++.+++... + +++.+|+++
T Consensus 294 s~dg~~l~~~s~~--~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 294 TNEGTVFTFKTNR--H---SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp EEETTEEEEEECT--T---CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred eccCCEEEEEECC--C---CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence 3445667776654 1 023455555555442 176553111111233344443555665543 3 789999966
Q ss_pred Cc-EEEEee
Q 045675 333 KR-NFILPI 340 (382)
Q Consensus 333 ~~-~~~v~~ 340 (382)
++ .+.+..
T Consensus 369 g~~~~~l~~ 377 (710)
T 2xdw_A 369 GALLKIFPL 377 (710)
T ss_dssp CCEEEEECC
T ss_pred CCEEEecCC
Confidence 54 566643
No 261
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=25.87 E-value=3.2e+02 Score=25.10 Aligned_cols=64 Identities=11% Similarity=-0.100 Sum_probs=48.4
Q ss_pred ceEEECceEEEEeecccccccccEEEEEECCCceeeEeCCCCCCCCCeeeEEEeCCeEEEEEec
Q 045675 208 DAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWRTAMPELPTDCYVKALSYDQSLALAVYP 271 (382)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~ 271 (382)
+.-+.+|+||..........-.-.+...+...+.|+.+..|........-....++.|+++...
T Consensus 343 CvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 343 CIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred hhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 4458999999987644221112367777888899999999987766667778889999999987
No 262
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.81 E-value=2.8e+02 Score=25.05 Aligned_cols=62 Identities=13% Similarity=0.195 Sum_probs=34.8
Q ss_pred ccEEEEEECCCc---eeeEeCCCCCCCC---CeeeEEEe--------CCeEEEEEecCCCccCCCCCeEEEEEECCCCCe
Q 045675 229 EKFVVSYDMNLE---LFWRTAMPELPTD---CYVKALSY--------DQSLALAVYPGLGFRSRLSNRFELWVMNEGKGW 294 (382)
Q Consensus 229 ~~~i~~fD~~~~---~~~~i~~P~~~~~---~~~~l~~~--------~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~W 294 (382)
...|++||+.|+ ..+.+.+|..... ..-.+++. ++....+... ....|-|.-+.....|
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~-------~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF-------LRGALFIYDHKKQDSW 194 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET-------TTTEEEEEETTTTEEE
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC-------CCCcEEEEECCCCcEE
Confidence 458999999997 5567788865331 22233333 1333333332 2556766666665336
Q ss_pred eEE
Q 045675 295 TRT 297 (382)
Q Consensus 295 ~~~ 297 (382)
...
T Consensus 195 Rv~ 197 (381)
T 3q6k_A 195 NVT 197 (381)
T ss_dssp EEE
T ss_pred EEc
Confidence 655
No 263
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=23.73 E-value=4.9e+02 Score=24.93 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=53.1
Q ss_pred ccEEEEEECCCceeeEeCCCCCCCCCeeeEEE-eCCe-EEEEEecCCCccCCCCCeEEEEEEC--CCCCeeEEEEeecCC
Q 045675 229 EKFVVSYDMNLELFWRTAMPELPTDCYVKALS-YDQS-LALAVYPGLGFRSRLSNRFELWVMN--EGKGWTRTFNTAFER 304 (382)
Q Consensus 229 ~~~i~~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~--~~~~W~~~~~i~~~~ 304 (382)
...|..+|+.+.+...+............+.. -+|+ |++.... . ......||..+ .......+..-....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~----~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN--R----AQNECKVNAYDAETGRFVRTLFVETDKH 307 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC--T----TSCEEEEEEEETTTCCEEEEEEEEECSS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC--C----CCCeeEEEEEECCCCceeeEEEEccCCC
Confidence 35799999998887665433211111222332 3676 5544443 1 23334444444 331133333222111
Q ss_pred ---cccceEEee--CCcEEEEEc-C---eEEEEeCCCCcEEEE
Q 045675 305 ---IAWPVGSFR--DSKIIMKSV-D---QFFLFNPKTKRNFIL 338 (382)
Q Consensus 305 ---~~~~~~~~~--~g~l~l~~~-~---~~~~yd~~t~~~~~v 338 (382)
....+.+.. +|.+++... + +++.+|..++..+.+
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec
Confidence 124456666 787655543 2 788888777766665
No 264
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=23.71 E-value=5e+02 Score=25.02 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=50.6
Q ss_pred EEEEEECCC-ceeeEeCCCCCCCC--CeeeEEEeCCe-EEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCC-
Q 045675 231 FVVSYDMNL-ELFWRTAMPELPTD--CYVKALSYDQS-LALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFER- 304 (382)
Q Consensus 231 ~i~~fD~~~-~~~~~i~~P~~~~~--~~~~l~~~~g~-L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~- 304 (382)
.|..+|+.+ .+...+..+..... ..... -||+ |.+.... . ......||.++-..+ ...+..-....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~--~----~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQS--R----DQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEE--T----TSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEec--c----cCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 788889988 77666654421111 12223 4554 5555543 1 234455555543323 44333322221
Q ss_pred --cccceEEeeCCcEEEEEcC----eEEEEeCCCCcEEEE
Q 045675 305 --IAWPVGSFRDSKIIMKSVD----QFFLFNPKTKRNFIL 338 (382)
Q Consensus 305 --~~~~~~~~~~g~l~l~~~~----~~~~yd~~t~~~~~v 338 (382)
....+.+..+|.+++.... .++.+|.+++ .+.+
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee
Confidence 1234556677776555443 7888887665 4443
No 265
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=22.77 E-value=1.2e+02 Score=26.80 Aligned_cols=130 Identities=7% Similarity=-0.038 Sum_probs=50.3
Q ss_pred CEEEEEECCCC--CeeeecCCCCeeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCceeeE-eCCCCCCCCCe
Q 045675 179 AIAEVYSTSTG--KWKEVAAGTGSCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELFWR-TAMPELPTDCY 255 (382)
Q Consensus 179 ~~~~vyss~t~--~W~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~~~-i~~P~~~~~~~ 255 (382)
..+..++..++ .|+....... .. .....+..+|.+|.-... ..|.++|..+.+-.. +..+...
T Consensus 59 g~l~a~d~~tG~~~w~~~~~~~~--~~-~~sp~~~~~~~v~~g~~d-------g~v~a~D~~tG~~~w~~~~~~~~---- 124 (369)
T 2hz6_A 59 GSLYTLGSKNNEGLTKLPFTIPE--LV-QASPCRSSDGILYMGKKQ-------DIWYVIDLLTGEKQQTLSSAFAD---- 124 (369)
T ss_dssp CCEEEC-----CCSEECSCCHHH--HH-TTCSCC-----CCCCEEE-------EEEEEECCC------------------
T ss_pred CEEEEEECCCCceeeeeeccCcc--cc-ccCceEecCCEEEEEeCC-------CEEEEEECCCCcEEEEecCCCcc----
Confidence 35667776544 5654221110 00 111222356777754433 379999998654322 1222111
Q ss_pred eeEEEeCCeEEEEEecCCCccCCCCCeEEEEEECCCCC-eeEEEEeecCCcccceEEee----CCcEEEEEcC-eEEEEe
Q 045675 256 VKALSYDQSLALAVYPGLGFRSRLSNRFELWVMNEGKG-WTRTFNTAFERIAWPVGSFR----DSKIIMKSVD-QFFLFN 329 (382)
Q Consensus 256 ~~l~~~~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~~~-W~~~~~i~~~~~~~~~~~~~----~g~l~l~~~~-~~~~yd 329 (382)
...-.++.|++... ...+..|..+..+. |.....- . ....+.. ++.+++...+ .++++|
T Consensus 125 -~~~p~~~~v~~~~~---------dg~v~a~d~~tG~~~W~~~~~~-~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 125 -SLSPSTSLLYLGRT---------EYTITMYDTKTRELRWNATYFD-Y----AASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp ---------EEEEEE---------EEEEECCCSSSSSCCCEEEEEE-E----CCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred -cccccCCEEEEEec---------CCEEEEEECCCCCEEEeEeccc-c----cCccccCCccccceEEEECCCCEEEEEE
Confidence 11113455554433 23444444444322 8865321 1 1111111 2457776665 899999
Q ss_pred CCCCcEEE
Q 045675 330 PKTKRNFI 337 (382)
Q Consensus 330 ~~t~~~~~ 337 (382)
.++++..+
T Consensus 190 ~~tG~~~W 197 (369)
T 2hz6_A 190 SESGDVLW 197 (369)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEE
Confidence 99987544
No 266
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=22.24 E-value=4e+02 Score=23.43 Aligned_cols=107 Identities=8% Similarity=-0.011 Sum_probs=56.7
Q ss_pred ceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccCCCCCeEEEEEECCC
Q 045675 214 GVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRSRLSNRFELWVMNEG 291 (382)
Q Consensus 214 G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~~~~~iW~l~~~ 291 (382)
|.+...+..+ ..|..+|+.+.+. ..+..+... .....+... +|.+.+.+.. ...+.+|.+...
T Consensus 182 ~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~--------dg~i~iwd~~~~ 246 (437)
T 3gre_A 182 KSLLVALTNL------SRVIIFDIRTLERLQIIENSPRH-GAVSSICIDEECCVLILGTT--------RGIIDIWDIRFN 246 (437)
T ss_dssp CEEEEEEETT------SEEEEEETTTCCEEEEEECCGGG-CCEEEEEECTTSCEEEEEET--------TSCEEEEETTTT
T ss_pred CCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCC-CceEEEEECCCCCEEEEEcC--------CCeEEEEEcCCc
Confidence 5544444433 4899999987654 333443111 122333332 5666655554 678999998765
Q ss_pred CCeeEEEEeecCCc--ccceEEe----eCCcEEEEEc-C-eEEEEeCCCCcEEEE
Q 045675 292 KGWTRTFNTAFERI--AWPVGSF----RDSKIIMKSV-D-QFFLFNPKTKRNFIL 338 (382)
Q Consensus 292 ~~W~~~~~i~~~~~--~~~~~~~----~~g~l~l~~~-~-~~~~yd~~t~~~~~v 338 (382)
..+..+.+..- +.-+.+. .++.+++... + .+.+||+++++....
T Consensus 247 ---~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 247 ---VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp ---EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred ---cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 33333322211 1122111 2444554443 3 799999998875443
No 267
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=22.00 E-value=3.3e+02 Score=22.38 Aligned_cols=144 Identities=9% Similarity=0.022 Sum_probs=66.0
Q ss_pred ceeEEEEcccccceeccCCCCCccccccceeEEEEEEEeeCCCCCeEEEEEEeecCCCCCEEEEEECCCCCeeeecCCCC
Q 045675 120 GMAFVLWNPATNEFKGLPTPSLTESRLKTFWMVSLGFGFNQDTNDYVLVRIVNFQARYDAIAEVYSTSTGKWKEVAAGTG 199 (382)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~ 199 (382)
...+.|||..+++............ .. ....+.+.+.......+.. ......+.+++..+..-........
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~---~~--~v~~~~~~~~~~~~~~~~~----~~~~~~i~lwd~~~~~~~~~~~~~~ 241 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQH---QG--AVKAVAWCPWQSNVLATGG----GTSDRHIRIWNVCSGACLSAVDAHS 241 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCC---CS--CEEEEEECTTSTTEEEEEE----CTTTCEEEEEETTTCCEEEEEECSS
T ss_pred CcceeEEECCCCcccccceeeeccc---CC--ceEEEEecCCCCcEEEEEe----cCCCCEEEEEeccccccccccccee
Confidence 4578888888776432221111100 00 1223444554444433332 2234577888877664333222211
Q ss_pred eeEEeCCcceEEECceEEEEeecccccccccEEEEEECCCcee-eEeCCCCCCCCCeeeEEEe-CCeEEEEEecCCCccC
Q 045675 200 SCVIYGGQDAVAVKGVLHWIANGIGVLVNEKFVVSYDMNLELF-WRTAMPELPTDCYVKALSY-DQSLALAVYPGLGFRS 277 (382)
Q Consensus 200 ~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~i~~fD~~~~~~-~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~ 277 (382)
... .....-++......... ....|..+|+.+.+- ..+.-.. +....+... +|++.+.+..
T Consensus 242 ~v~----~~~~~~~~~~~~~~sg~----~d~~i~iwd~~~~~~~~~l~gH~---~~V~~l~~spdg~~l~S~s~------ 304 (318)
T 4ggc_A 242 QVC----SILWSPHYKELISGHGF----AQNQLVIWKYPTMAKVAELKGHT---SRVLSLTMSPDGATVASAAA------ 304 (318)
T ss_dssp CEE----EEEEETTTTEEEEEECT----TTCCEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSCEEEEET------
T ss_pred eee----eeeecccccceEEEEEc----CCCEEEEEECCCCcEEEEEcCCC---CCEEEEEEcCCCCEEEEEec------
Confidence 110 01222233333333221 134788899876543 2222211 123334433 6665544443
Q ss_pred CCCCeEEEEEECCC
Q 045675 278 RLSNRFELWVMNEG 291 (382)
Q Consensus 278 ~~~~~~~iW~l~~~ 291 (382)
...+.||.+.+.
T Consensus 305 --D~~v~iWd~~~~ 316 (318)
T 4ggc_A 305 --DETLRLWRCFEL 316 (318)
T ss_dssp --TTEEEEECCSCC
T ss_pred --CCeEEEEECCCC
Confidence 678999987653
Done!