BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045682
(309 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 48 FSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIV- 105
FS +EL++A++N+ ++ ++ + F +YKG L++V + + + + V
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
S +HR +L G C+ +LV+ Y+ GS+A +R + QP PL R +I
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKRQRI 136
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFS--------- 208
A A +AYLH +I RD K +NIL +EE +AKL D+
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 209 ----------------------FSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKY 246
F + EL+TG RAFDLARL DD V L D VK
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VMLLDWVKGL 255
Query: 247 FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK 302
+E +L ++D + G+ K+++++ + C SP++RP M +V + L+
Sbjct: 256 LKEKKLEALVDVDLQGNY----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 48 FSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIV- 105
FS +EL++A++N+ ++ ++ + F +YKG L++V + + + + V
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
S +HR +L G C+ +LV+ Y+ GS+A +R + QP PL R +I
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKRQRI 144
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFS--------- 208
A A +AYLH +I RD K +NIL +EE +AKL D+
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 209 ----------------------FSISIPEGELLTGLRAFDLARLNEDDGYVALRDHVKKY 246
F + EL+TG RAFDLARL DD V L D VK
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VMLLDWVKGL 263
Query: 247 FEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLK 302
+E +L ++D + G+ K+++++ + C SP++RP M +V + L+
Sbjct: 264 LKEKKLEALVDVDLQGNY----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 45 YCTFSAKELEIATNNYDSEKV------IMKRSFYTLYKGFCQERLISVMKF----DASKP 94
+ +FS EL+ TNN+D + + + F +YKG+ ++V K D +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 95 RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
+ I ++ H +L+G + LV+ Y+ GSL DR+ + P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL R KIA+ AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 45 YCTFSAKELEIATNNYDSEKV------IMKRSFYTLYKGFCQERLISVMKF----DASKP 94
+ +FS EL+ TNN+D + + + F +YKG+ ++V K D +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 95 RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
+ I ++ H +L+G + LV+ Y+ GSL DR+ + P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL R KIA+ AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 45 YCTFSAKELEIATNNYDSEKV------IMKRSFYTLYKGFCQERLISVMKF----DASKP 94
+ +FS EL+ TNN+D + + + F +YKG+ ++V K D +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 95 RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
+ I ++ H +L+G + LV+ Y+ GSL DR+ + P
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 122
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL R KIA+ AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 123 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 45 YCTFSAKELEIATNNYDSEKVIM------KRSFYTLYKGFCQERLISVMKF----DASKP 94
+ +FS EL+ TNN+D + + + F +YKG+ ++V K D +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 95 RMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQ 153
+ I ++ H +L+G + LV+ Y GSL DR+ + P
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP--- 119
Query: 154 HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL R KIA+ AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 120 --PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 52 ELEIATNNYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKPRMYDCCINNIVYASQM 110
+LE ATNN+D + +I F +YKG ++ +++ + + + I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
H LIG C E IL+++Y+ G+L + P + RL+I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEICIGAA 149
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS---ISIPEGELLTGLRA--- 224
+ YLH R +I RD K NIL +E V K+ DF S + + L ++
Sbjct: 150 RGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 225 ------FDLARLNE-DDGY------------------------VALRDHVKKYFEEDRLN 253
F RL E D Y V L + + +L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 254 EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR 306
+I+DP + D+ + + L+ + +C+ S DRP+M DV KL+ R
Sbjct: 267 QIVDP-NLADKI---RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 52 ELEIATNNYDSEKVIMKRSFYTLYKGFCQERL-ISVMKFDASKPRMYDCCINNIVYASQM 110
+LE ATNN+D + +I F +YKG ++ +++ + + + I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
H LIG C E IL+++Y+ G+L + P + RL+I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEICIGAA 149
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS---ISIPEGELLTGLRA--- 224
+ YLH R +I RD K NIL +E V K+ DF S + + L ++
Sbjct: 150 RGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 225 ------FDLARLNE-DDGY------------------------VALRDHVKKYFEEDRLN 253
F RL E D Y V L + + +L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 254 EIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYR 306
+I+DP + D+ + + L+ + +C+ S DRP+M DV KL+ R
Sbjct: 267 QIVDP-NLADKI---RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPIL--VFEYINCGSLA 141
+ +K DA P+ I + H K GCC + L V EY+ GSL
Sbjct: 65 VKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
D + P+H + L L A+ I +AYLH + I RD N+L + + +
Sbjct: 124 DYL-------PRHS-IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRL 172
Query: 202 AKLFDFSFSISIPEG 216
K+ DF + ++PEG
Sbjct: 173 VKIGDFGLAKAVPEG 187
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H K GCC + + LV EY+ GSL D + P+H + L L A+
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHS-IGLAQLLLFAQ 124
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
I +AYLH + I R+ N+L + + + K+ DF + ++PEG
Sbjct: 125 QICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + + IA+
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 127
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+N K+ DF +
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + + IA+
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+N K+ DF +
Sbjct: 116 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
++ H +L G CLE Q PI LVFE++ G L+D +R Q L +
Sbjct: 61 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 113
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
D+ +AYL VI RD N L E V K+ DF + + + + TG +
Sbjct: 114 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
F +R + + + + F E ++ +E+++ + G R +
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 230
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
Y ++ C E P DRP + ++L ++ S
Sbjct: 231 LASTHVY-QIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H K GCC + + LV EY+ GSL D + P+H + L L A+
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHS-IGLAQLLLFAQ 124
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
I +AYLH + I R+ N+L + + + K+ DF + ++PEG
Sbjct: 125 QICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
++ H +L G CLE Q PI LVFE++ G L+D +R Q L +
Sbjct: 58 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 110
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
D+ +AYL VI RD N L E V K+ DF + + + + TG +
Sbjct: 111 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 167
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
F +R + + + + F E ++ +E+++ + G R +
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
Y ++ C E P DRP + ++L ++ S
Sbjct: 228 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
++ H +L G CLE Q PI LVFE++ G L+D +R Q L +
Sbjct: 56 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 108
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
D+ +AYL VI RD N L E V K+ DF + + + + TG +
Sbjct: 109 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 165
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
F +R + + + + F E ++ +E+++ + G R +
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
Y ++ C E P DRP + ++L ++ S
Sbjct: 226 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
+A + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G Q+ I V ++ SL + H + + E + + IA+
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 127
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+N K+ DF +
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
++ H +L G CLE Q PI LVFE++ G L+D +R Q L +
Sbjct: 58 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 110
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
D+ +AYL VI RD N L E V K+ DF + + + + TG +
Sbjct: 111 DVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 167
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
F +R + + + + F E ++ +E+++ + G R +
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
Y ++ C E P DRP + ++L + S
Sbjct: 228 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
++ H +L G CLE Q PI LVFE++ G L+D +R Q L +
Sbjct: 78 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 130
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
D+ +AYL VI RD N L E V K+ DF + + + + TG +
Sbjct: 131 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 187
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
F +R + + + + F E ++ +E+++ + G R +
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 247
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
Y ++ C E P DRP + ++L ++ S
Sbjct: 248 LASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 11/179 (6%)
Query: 40 GKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYD 98
G + C K+L + D +++R + G + +K D S+P D
Sbjct: 1 GSQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 60
Query: 99 CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL 158
I + + HR +L G L + +V E GSL DR+R +H L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FL 113
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
L + A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 114 LGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 13/180 (7%)
Query: 40 GKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYD 98
G + C K+L + D +++R + G + +K D S+P D
Sbjct: 1 GSQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 60
Query: 99 CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL 158
I + + HR +L G L + +V E GSL DR+R +H+
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-------KHQGHF 112
Query: 159 LTHRL-KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
L L + A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 113 LLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
C K+L + D +++R + G + +K D S+P D I +
Sbjct: 13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 72
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
+ HR +L G L + +V E GSL DR+R +H LL +
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 125
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 126 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
C K+L + D +++R + G + +K D S+P D I +
Sbjct: 13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 72
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
+ HR +L G L + +V E GSL DR+R +H LL +
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 125
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 126 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
C K+L + D +++R + G + +K D S+P D I +
Sbjct: 3 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
+ HR +L G L + +V E GSL DR+R +H LL +
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 115
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
C K+L + D +++R + G + +K D S+P D I +
Sbjct: 3 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
+ HR +L G L + +V E GSL DR+R +H LL +
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 115
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 116 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 46 CTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDA-SKPRMYDCCINNI 104
C K+L + D +++R + G + +K D S+P D I +
Sbjct: 3 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREV 62
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
+ HR +L G L + +V E GSL DR+R +H LL +
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGH-----FLLGTLSR 115
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
A +A + YL + I RD N+L ++ K+ DF ++P+ +
Sbjct: 116 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H K GCC + + LV EY+ GSL D + P+H + L L A+
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRH-CVGLAQLLLFAQ 119
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
I +AYLH + I R N+L + + + K+ DF + ++PEG
Sbjct: 120 QICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 165
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 110 MIHRCFFKLIGCCLET--QIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H K GCC + + LV EY+ GSL D + P+H + L L A+
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRH-CVGLAQLLLFAQ 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
I +AYLH + I R N+L + + + K+ DF + ++PEG
Sbjct: 119 QICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 164
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 97 YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP 156
+ I + + ++ H + GC L LV EY GS +D + + P + E
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 156
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
+TH +AYLH +I RD K NIL +E + KL DF S SI P
Sbjct: 157 AAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 97 YDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEP 156
+ I + + ++ H + GC L LV EY GS +D + + P + E
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 117
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 214
+TH +AYLH +I RD K NIL +E + KL DF S SI P
Sbjct: 118 AAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
++ H +L G CLE Q PI LV E++ G L+D +R Q L +
Sbjct: 59 KLSHPKLVQLYGVCLE-QAPICLVTEFMEHGCLSDYLRTQRG------LFAAETLLGMCL 111
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL--TGLR-- 223
D+ +AYL VI RD N L E V K+ DF + + + + TG +
Sbjct: 112 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168
Query: 224 -------AFDLARLNEDDGYVALRDHVKKYFEEDRL-------NEIIDPLIMGDRSCSGK 269
F +R + + + + F E ++ +E+++ + G R +
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
Query: 270 EQQLQAYAHLIFECVNESPVDRPTMVDVAKKLKQMYRS 307
Y ++ C E P DRP + ++L ++ S
Sbjct: 229 LASTHVY-QIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
+Q+ H +L+G +E + + +V EY+ GSL D +R + + LL K +
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 123
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 124 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 139
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 140 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 138
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 139 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
+Q+ H +L+G +E + + +V EY+ GSL D +R + + LL K +
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 108
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 109 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 139
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 140 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
+Q+ H +L+G +E + + +V EY+ GSL D +R + + LL K +
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 114
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 115 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 131
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 132 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
+Q+ H +L+G +E + + +V EY+ GSL D +R + + LL K +
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 295
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 296 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 125 LQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 117 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 117 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 54 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 113
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 114 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 170
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 171 LVTEDNVMKIADFGLARDI 189
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 32/196 (16%)
Query: 40 GKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDC 99
G ++ + E E+A + + + SF +Y+G + V+K D + R+
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK----GVVK-DEPETRV--- 52
Query: 100 CINNIVYASQMIHRCFF----------------KLIGCCLETQIPILVFEYINCGSLADR 143
I + A+ M R F +L+G + Q +++ E + G L
Sbjct: 53 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 112
Query: 144 IRIQHNPQPQHEPLL----LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 199
+R P+ ++ P+L L+ +++A +IA+ +AYL+ + RD N + E+
Sbjct: 113 LR-SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAED 168
Query: 200 NVAKLFDFSFSISIPE 215
K+ DF + I E
Sbjct: 169 FTVKIGDFGMTRDIXE 184
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 107 ASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIA 166
+SQ+ H+ +I E LV EYI +L++ I H PL + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-------SHGPLSVDTAINFT 117
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL 218
I + I + H ++ RD K NIL + K+FDF + ++ E L
Sbjct: 118 NQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 57 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 116
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 117 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 173
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 174 LVTEDNVMKIADFGLARDI 192
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 125 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 51 KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
KE+E+ E+V+ + +F + K + + +++ + ++ R I + S++
Sbjct: 9 KEIEV-------EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRV 59
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
H KL G CL P+ LV EY GSL + + H +P H +
Sbjct: 60 NHPNIVKLYGACLN---PVCLVMEYAEGGSLYN---VLHGAEPLPY-YTAAHAMSWCLQC 112
Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSISI 213
+ +AYLH P+ +I RD K N+L V K+ DF + I
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 157
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 58 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 117
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 118 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 174
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 175 LVTEDNVMKIADFGLARDI 193
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 125 TQIPIL--VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
TQ P L V EY++ GSL R+ H E L RL +A D+A + YLH P
Sbjct: 104 TQPPNLSIVTEYLSRGSL---YRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNRNP- 158
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
P++ RD K N+L +++ K+ DF S
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYA 107
S+ + EI + I SF T+YKG + + + ++ A P+ N +
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H +G + Q+ I V ++ SL + H + + E + L + IA+
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIAR 113
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 114 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 51 KELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
KE+E+ E+V+ + +F + K + + +++ + ++ R I + S++
Sbjct: 8 KEIEV-------EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRV 58
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDI 169
H KL G CL P+ LV EY GSL + + H +P H +
Sbjct: 59 NHPNIVKLYGACLN---PVCLVMEYAEGGSLYN---VLHGAEPLPY-YTAAHAMSWCLQC 111
Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSISI 213
+ +AYLH P+ +I RD K N+L V K+ DF + I
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 50 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 109
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 110 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 166
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 167 LVTEDNVMKIADFGLARDI 185
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 125 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 106 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 165
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 222
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 223 LVTEDNVMKIADFGLARDI 241
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 144 IRIQHNP------QPQHEP---LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
++ + P P H P L + A +A + YL + I RD N+
Sbjct: 125 LQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV 181
Query: 195 LFNEENVAKLFDFSFSISI 213
L E+NV K+ DF + I
Sbjct: 182 LVTEDNVMKIADFGLARDI 200
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIR---------IQHN--------PQPQHEPLLL 159
KL+G C + L+FEY+ G L + +R + H+ P PL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+L IA+ +A +AYL R + RD N L E V K+ DF S +I
Sbjct: 174 AEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-----QHEPLLLTHR 162
+ + H K G C+E I+VFEY+ G L +R H P + P LT
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR-AHGPDAVLMAEGNPPTELTQS 128
Query: 163 --LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
L IA+ IA + YL + + RD N L E + K+ DF S
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 55 IATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMK--------FDASKPRMYDCCINNIV 105
+A N + EK I K F ++KG +++ + +K + + +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
S + H KL G L P +V E++ CG L R+ + + P+ + +L++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH------PIKWSVKLRL 127
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 210
DIA I Y+ P P++ RD + NI +EN AK+ DFS S
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHNPQPQHEP-------LLLTHRL 163
H L+G C + P++V E+ G+L+ +R + N ++P L L H +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 152 XYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLL 158
+ + H+ + G C E + ++VFEY+ G L +R H P + PL
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L +A +A + YL G + RD N L + V K+ DF S I
Sbjct: 157 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLL 158
+ + H+ + G C E + ++VFEY+ G L +R H P + PL
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L +A +A + YL G + RD N L + V K+ DF S I
Sbjct: 128 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQ---------HEPLL 158
+ + H+ + G C E + ++VFEY+ G L +R H P + PL
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 159 LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L +A +A + YL G + RD N L + V K+ DF S I
Sbjct: 134 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 69 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 121
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 52 ELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
+ EI + I SF T+YKG + + + ++ A P+ N + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
H +G + Q+ I V ++ SL + H + + E + L + IA+ A
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIARQTA 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 115 QGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 32/184 (17%)
Query: 52 ELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI 111
E E+A + + + SF +Y+G + V+K D + R+ I + A+ M
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAK----GVVK-DEPETRV---AIKTVNEAASMR 55
Query: 112 HRCFF----------------KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHE 155
R F +L+G + Q +++ E + G L +R P+ ++
Sbjct: 56 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR-SLRPEMENN 114
Query: 156 PLL----LTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 211
P+L L+ +++A +IA+ +AYL+ + RD N + E+ K+ DF +
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 212 SIPE 215
I E
Sbjct: 172 DIXE 175
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 115
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 115
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 62 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 110
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 111 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 130
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 52 ELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
+ EI + I SF T+YKG + + + ++ A P+ N + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
H +G + Q+ I V ++ SL + H + + E + L + IA+ A
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIARQTA 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 115 QGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIA 170
H +L G C + + ++ EY+ G L + +R ++H Q Q L++ KD+
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 130
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 18/167 (10%)
Query: 45 YCTFSAKELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINN 103
Y A E+ ++T I SF T+YKG + + + ++K P + N
Sbjct: 30 YWEIEASEVMLSTR-------IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNE 82
Query: 104 IVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRL 163
+ + H +G + + I V ++ SL + +Q + +
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETK------FQMFQLI 135
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ A + YLH + +I RD K +NI +E K+ DF +
Sbjct: 136 DIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 125 TQIPIL--VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
TQ P L V EY++ GSL R+ H E L RL +A D+A + YLH P
Sbjct: 104 TQPPNLSIVTEYLSRGSL---YRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNRNP- 158
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
P++ R+ K N+L +++ K+ DF S
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 55 IATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMK--------FDASKPRMYDCCINNIV 105
+A N + EK I K F ++KG +++ + +K + + +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
S + H KL G L P +V E++ CG L R+ + + P+ + +L++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH------PIKWSVKLRL 127
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 210
DIA I Y+ P P++ RD + NI +EN AK+ DF S
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 52 ELEIATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMKFDASKPRMYDCCINNIVYASQM 110
+ EI + I SF T+YKG + + + ++ A P+ N + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 111 IHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIA 170
H +G Q+ I V ++ SL + H + + E + L + IA+ A
Sbjct: 62 RHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---IDIARQTA 114
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ YLH + +I RD K +NI +E+ K+ DF +
Sbjct: 115 QGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q + F + C +T+ + V EY+N G L ++ Q +H +
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SA 128
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I+ A+ YLH R +I+RD KL N+L + E KL D+
Sbjct: 129 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 166
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q + F + C +T+ + V EY+N G L ++ Q +H +
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SA 160
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I+ A+ YLH R +I+RD KL N+L + E KL D+
Sbjct: 161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 198
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHE-PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY GS++D IR+++ + E +L LK + YLH F R I RD
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK-------GLEYLH--FMRK-IHRD 150
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K NIL N E AKL DF +
Sbjct: 151 IKAGNILLNTEGHAKLADFGVA 172
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIA 166
S + H ++ G + Q ++ +YI G L +R Q P P + A
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK--------FYA 112
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 215
++ A+ YLH + +I+RD K NIL ++ K+ DF F+ +P+
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNP--------QPQHEP--L 157
+ + H K G C + I+VFEY+ G L +R H P QP+ L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLR-AHGPDAMILVDGQPRQAKGEL 130
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
L+ L IA IA+ + YL + + RD N L + K+ DF S
Sbjct: 131 GLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q + F + C +T+ + V EY+N G L ++ Q +H +
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SA 113
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I+ A+ YLH R +I+RD KL N+L + E KL D+
Sbjct: 114 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 151
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q + F + C +T+ + V EY+N G L ++ Q +H +
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY-------SA 117
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I+ A+ YLH R +I+RD KL N+L + E KL D+
Sbjct: 118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 155
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 55 IATNNYDSEKVIMKRSFYTLYKG-FCQERLISVMK--------FDASKPRMYDCCINNIV 105
+A N + EK I K F ++KG +++ + +K + + +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
S + H KL G L P +V E++ CG L R+ + + P+ + +L++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH------PIKWSVKLRL 127
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 210
DIA I Y+ P P++ RD + NI +EN AK+ DF S
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 74 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 126
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
IA +A++ R I RD + +NIL ++ K+ DF L
Sbjct: 127 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG------------------L 165
Query: 228 ARLNEDDGYVA 238
ARL ED+ Y A
Sbjct: 166 ARLIEDNEYTA 176
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 69 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 121
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
IA +A++ R I RD + +NIL ++ K+ DF L
Sbjct: 122 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG------------------L 160
Query: 228 ARLNEDDGYVA 238
ARL ED+ Y A
Sbjct: 161 ARLIEDNEYTA 171
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 70 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 122
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
IA +A++ R I RD + +NIL ++ K+ DF L
Sbjct: 123 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG------------------L 161
Query: 228 ARLNEDDGYVA 238
ARL ED+ Y A
Sbjct: 162 ARLIEDNEYTA 172
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 13/141 (9%)
Query: 86 VMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIR 145
+++FD R + + + + H K IG + + + EYI G+L I+
Sbjct: 43 LIRFDEETQRTF---LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK 99
Query: 146 IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 205
+ P + R+ AKDIA+ +AYLH +I RD N L E +
Sbjct: 100 SMDSQYP------WSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVA 150
Query: 206 DFSFS-ISIPEGELLTGLRAF 225
DF + + + E GLR+
Sbjct: 151 DFGLARLMVDEKTQPEGLRSL 171
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHNPQPQHEPL-----LLTHRLKI 165
H L+G C + P++V E+ G+L+ +R + N ++ L L H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 59 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 111
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
IA +A++ R I RD + +NIL ++ K+ DF L
Sbjct: 112 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG------------------L 150
Query: 228 ARLNEDDGYVA 238
ARL ED+ Y A
Sbjct: 151 ARLIEDNEYTA 161
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
IA +A++ R I RD + +NIL ++ K+ DF L
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG------------------L 155
Query: 228 ARLNEDDGYVA 238
ARL ED+ Y A
Sbjct: 156 ARLIEDNEYTA 166
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 42/200 (21%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L + ++ EY+ GSL D ++ + +LL + + IA
Sbjct: 67 HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK-----VLLPKLIDFSAQIAE 121
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLN 231
+AY+ + I RD + +N+L +E + K+ DF LAR+
Sbjct: 122 GMAYIER---KNYIHRDLRAANVLVSESLMCKIADFG------------------LARVI 160
Query: 232 EDDGYVALRDHVK---KYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESP 288
ED+ Y A R+ K K+ + +N C + + ++ L++E V
Sbjct: 161 EDNEYTA-REGAKFPIKWTAPEAIN----------FGCFTIKSDVWSFGILLYEIVTYGK 209
Query: 289 VDRP--TMVDVAKKLKQMYR 306
+ P T DV L Q YR
Sbjct: 210 IPYPGRTNADVMTALSQGYR 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 120 GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG 179
G L++ ++ EY+ GS D ++ P P E + T I ++I + YLH
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLK----PGPLEETYIAT----ILREILKGLDYLHS- 134
Query: 180 FPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
I RD K +N+L +E+ KL DF +
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHNP-QPQHEP-------LLLTHR 162
H L+G C + P++V E+ G+L+ +R + N P P L L H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 151 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 72/195 (36%), Gaps = 21/195 (10%)
Query: 31 LKELIRASNGKYNPYCTFSAKELEIATNNYDSEKVIMKRSFYTLYK------GFCQERLI 84
+K+ +GK NP T + N+ + VI + +F + K G + I
Sbjct: 1 MKKHHHHHHGKNNPDPTIYPV---LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAI 57
Query: 85 SVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRI 144
MK ASK D V H L+G C L EY G+L D +
Sbjct: 58 KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
Query: 145 R----IQHNP-----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL 195
R ++ +P L L A D+A + YL + I RD NIL
Sbjct: 118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNIL 174
Query: 196 FNEENVAKLFDFSFS 210
E VAK+ DF S
Sbjct: 175 VGENYVAKIADFGLS 189
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 107/303 (35%), Gaps = 49/303 (16%)
Query: 43 NPYCTFSAKELEIATNNYDSE--KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCC 100
+P F K L + + E KV+ +F+ + + ++K +AS + D
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL- 73
Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN----------- 149
++ Q+ H KL G C + +L+ EY GSL +R
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 150 ------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 203
P L + + A I+ + YL ++ RD NIL E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMK 190
Query: 204 LFDFSFSISIPE---------GELLTGLRA----FDLARLNEDDGY---------VALRD 241
+ DF S + E G + A FD + D + V L
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 242 HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKL 301
+ +RL ++ +R + E+ + L+ +C + P RP D++K L
Sbjct: 251 NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYR----LMLQCWKQEPDKRPVFADISKDL 306
Query: 302 KQM 304
++M
Sbjct: 307 EKM 309
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +GF + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 64 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 123
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 124 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 180
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 181 LVTENNVMKIADFGLARDI 199
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 107/303 (35%), Gaps = 49/303 (16%)
Query: 43 NPYCTFSAKELEIATNNYDSE--KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCC 100
+P F K L + + E KV+ +F+ + + ++K +AS + D
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL- 73
Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN----------- 149
++ Q+ H KL G C + +L+ EY GSL +R
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 150 ------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 203
P L + + A I+ + YL ++ RD NIL E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMK 190
Query: 204 LFDFSFSISIPE---------GELLTGLRA----FDLARLNEDDGY---------VALRD 241
+ DF S + E G + A FD + D + V L
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 242 HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKL 301
+ +RL ++ +R + E+ + L+ +C + P RP D++K L
Sbjct: 251 NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYR----LMLQCWKQEPDKRPVFADISKDL 306
Query: 302 KQM 304
++M
Sbjct: 307 EKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 107/303 (35%), Gaps = 49/303 (16%)
Query: 43 NPYCTFSAKELEIATNNYDSE--KVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCC 100
+P F K L + + E KV+ +F+ + + ++K +AS + D
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL- 73
Query: 101 INNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN----------- 149
++ Q+ H KL G C + +L+ EY GSL +R
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 150 ------PQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 203
P L + + A I+ + YL ++ RD NIL E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMK 190
Query: 204 LFDFSFSISIPE---------GELLTGLRA----FDLARLNEDDGY---------VALRD 241
+ DF S + E G + A FD + D + V L
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 242 HVKKYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESPVDRPTMVDVAKKL 301
+ +RL ++ +R + E+ + L+ +C + P RP D++K L
Sbjct: 251 NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYR----LMLQCWKQEPDKRPVFADISKDL 306
Query: 302 KQM 304
++M
Sbjct: 307 EKM 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 61 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 120
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 121 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 177
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 178 LVTENNVMKIADFGLARDI 196
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 65 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 117
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 118 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 164
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 42/200 (21%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L + + ++ E++ GSL D ++ + +LL + + IA
Sbjct: 66 HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGK-----VLLPKLIDFSAQIAE 120
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLN 231
+AY+ + I RD + +N+L +E + K+ DF LAR+
Sbjct: 121 GMAYIER---KNYIHRDLRAANVLVSESLMCKIADFG------------------LARVI 159
Query: 232 EDDGYVALRDHVK---KYFEEDRLNEIIDPLIMGDRSCSGKEQQLQAYAHLIFECVNESP 288
ED+ Y A R+ K K+ + +N C + + ++ L++E V
Sbjct: 160 EDNEYTA-REGAKFPIKWTAPEAIN----------FGCFTIKSNVWSFGILLYEIVTYGK 208
Query: 289 VDRP--TMVDVAKKLKQMYR 306
+ P T DV L Q YR
Sbjct: 209 IPYPGRTNADVMSALSQGYR 228
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 70 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 122
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 123 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 72 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 124
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 125 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 59 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 118
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 119 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTARNV 175
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 176 LVTENNVMKIADFGLARDI 194
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 66 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 119 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 165
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 187 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 118 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 177
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 178 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 234
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 235 LVTENNVMKIADFGLARDI 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 152 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 77 GFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYIN 136
G + I MK ASK D V H L+G C L EY
Sbjct: 40 GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 99
Query: 137 CGSLADRIR----IQHNP-----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFR 187
G+L D +R ++ +P L L A D+A + YL + I R
Sbjct: 100 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHR 156
Query: 188 DFKLSNILFNEENVAKLFDFSFS 210
D NIL E VAK+ DF S
Sbjct: 157 DLAARNILVGENYVAKIADFGLS 179
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 73 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 125
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 126 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 172
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHN--------PQPQHEPLL-LTH 161
H L+G C + P++V E+ G+L+ +R + N P+ ++ L L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQ---------HEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P + E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 142
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 143 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 112 HRCFFKLIGCCLETQIPILVF-EYINCGSLADRIRIQHNPQPQHEPL-----LLTHRLKI 165
H L+G C + P++V E+ G+L+ +R + N ++ L L H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 152
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 153 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 125
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 126 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 109 QMIHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q+ H+ +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 60 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 112
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDL 227
IA +A++ R I R+ + +NIL ++ K+ DF L
Sbjct: 113 QIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFG------------------L 151
Query: 228 ARLNEDDGYVA 238
ARL ED+ Y A
Sbjct: 152 ARLIEDNEYTA 162
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 25/162 (15%)
Query: 64 KVIMKRSFYTLYKGFCQERLISV-------MKFDASKPRMYDCCINNIVYASQMIHRCFF 116
KV+ F T++KG S+ + D S + + ++++ + H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQH----NPQPQHEPLLLTHRLKIAKDIANA 172
+L+G C + + LV +Y+ GSL D +R QH PQ LLL ++IAK
Sbjct: 97 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQ-----LLLNWGVQIAK----G 145
Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
+ YL ++ R+ N+L + ++ DF + +P
Sbjct: 146 MYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 184
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 29/151 (19%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
+L++V K D K + + N +V H ++ L +V E++ G+L
Sbjct: 177 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIA-------NAIAYLHVGFPRPVIFRDFKLSNI 194
D ++TH + IA A++ LH + VI RD K +I
Sbjct: 237 D---------------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSI 278
Query: 195 LFNEENVAKLFDFSF----SISIPEGELLTG 221
L + KL DF F S +P + L G
Sbjct: 279 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ EY + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV ++ DF + I
Sbjct: 189 LVTENNVMRIADFGLARDI 207
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 64 KVIMKRSFYTLYKGFC---QERL-----ISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
KV+ F T++KG E + I V++ D S + + ++++ + H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE-DKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQH----NPQPQHEPLLLTHRLKIAKDIAN 171
+L+G C + + LV +Y+ GSL D +R QH PQ LLL ++IAK
Sbjct: 78 VRLLGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQ-----LLLNWGVQIAK---- 126
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
+ YL ++ R+ N+L + ++ DF + +P
Sbjct: 127 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H +LIG C + Q +V E + G +R + L + L++ D
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGD 221
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YL + I RD N L E+NV K+ DF S
Sbjct: 222 AAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H +LIG C + Q +V E + G +R + L + L++ D
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGD 221
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A + YL + I RD N L E+NV K+ DF S
Sbjct: 222 AAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 29/151 (19%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
+L++V K D K + + N +V H ++ L +V E++ G+L
Sbjct: 100 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIA-------NAIAYLHVGFPRPVIFRDFKLSNI 194
D ++TH + IA A++ LH + VI RD K +I
Sbjct: 160 D---------------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSI 201
Query: 195 LFNEENVAKLFDFSF----SISIPEGELLTG 221
L + KL DF F S +P + L G
Sbjct: 202 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G ++ L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHE---PLLLTHRLKIAKD 168
H L+G C +++ EY G L + +R + E PL L L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 169 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 15/144 (10%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
+L++V K D K + + N +V H ++ L +V E++ G+L
Sbjct: 50 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 109
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
D + + Q + L + A++ LH + VI RD K +IL +
Sbjct: 110 DIVTHTRMNEEQIAAVCLA--------VLQALSVLHA---QGVIHRDIKSDSILLTHDGR 158
Query: 202 AKLFDFSF----SISIPEGELLTG 221
KL DF F S +P + L G
Sbjct: 159 VKLSDFGFCAQVSKEVPRRKXLVG 182
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 29/151 (19%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
+L++V K D K + + N +V H ++ L +V E++ G+L
Sbjct: 57 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIA-------NAIAYLHVGFPRPVIFRDFKLSNI 194
D ++TH + IA A++ LH + VI RD K +I
Sbjct: 117 D---------------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSI 158
Query: 195 LFNEENVAKLFDFSF----SISIPEGELLTG 221
L + KL DF F S +P + L G
Sbjct: 159 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 33/199 (16%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN--NIVY 106
+A E + +N ++I + + +YKG ER ++V F + + + IN NI
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNF---INEKNIYR 60
Query: 107 ASQMIHRCFFKLI----GCCLETQIP-ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTH 161
M H + I + ++ +LV EY GSL + + +
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD--------WVS 112
Query: 162 RLKIAKDIANAIAYLHVGFPR-----PVI-FRDFKLSNILFNEENVAKLFDFSFSISIPE 215
++A + +AYLH PR P I RD N+L + + DF S+
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR--- 169
Query: 216 GELLTGLRAFDLARLNEDD 234
LTG R L R E+D
Sbjct: 170 ---LTGNR---LVRPGEED 182
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C +V EY+ G+L D +R + E + L +A I++
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLR-----ECNREEVTAVVLLYMATQISS 141
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E +V K+ DF S L+TG
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS------RLMTG 182
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 66 IMKRSFYTLYKGFCQ--ERLISVMKFDASKPRMYDCCINN-IVYASQMIHRCFFKLIGCC 122
I K SF ++KG ++++++ D + I I SQ K G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 123 LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
L+ ++ EY+ GS D + P P E + T I ++I + YLH
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT----ILREILKGLDYLHS---E 138
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
I RD K +N+L +E KL DF +
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 15/144 (10%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
+L++V K D K + + N +V H ++ L +V E++ G+L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 201
D + + Q + L + A++ LH + VI RD K +IL +
Sbjct: 106 DIVTHTRMNEEQIAAVCLA--------VLQALSVLHA---QGVIHRDIKSDSILLTHDGR 154
Query: 202 AKLFDFSF----SISIPEGELLTG 221
KL DF F S +P + L G
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKXLVG 178
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNP------QPQHEPL-LLTHR-- 162
H L+G C +++ EY G L + +R + P P H P L+ R
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L + +A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 66 IMKRSFYTLYKGFCQ--ERLISVMKFDASKPRMYDCCINN-IVYASQMIHRCFFKLIGCC 122
I K SF ++KG ++++++ D + I I SQ K G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 123 LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
L+ ++ EY+ GS D + P P E + T I ++I + YLH
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT----ILREILKGLDYLHS---E 123
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
I RD K +N+L +E KL DF +
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
K G L+ ++ EY+ GS D + P P E + T I ++I + YL
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT----ILREILKGLDYL 120
Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H I RD K +N+L +E KL DF +
Sbjct: 121 HS---EKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 29/151 (19%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
+L++V K D K + + N +V H ++ L +V E++ G+L
Sbjct: 55 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 142 DRIRIQHNPQPQHEPLLLTHRLKIAKDIA-------NAIAYLHVGFPRPVIFRDFKLSNI 194
D ++TH + IA A++ LH + VI RD K +I
Sbjct: 115 D---------------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSI 156
Query: 195 LFNEENVAKLFDFSF----SISIPEGELLTG 221
L + KL DF F S +P + L G
Sbjct: 157 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHE---PLLLTHRLKIAKD 168
H L+G C +++ EY G L + +R + E PL L L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 161 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+N GSL D ++ + + L L + ++ IA+ +AY+ + RD
Sbjct: 86 IVTEYMNKGSLLDFLKGETG-----KYLRLPQLVDMSAQIASGMAYVER---MNYVHRDL 137
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 138 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 168
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 66 IMKRSFYTLYKGFCQ--ERLISVMKFDASKPRMYDCCINN-IVYASQMIHRCFFKLIGCC 122
I K SF ++KG ++++++ D + I I SQ K G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 123 LETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
L+ ++ EY+ GS D + P P E + T I ++I + YLH
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT----ILREILKGLDYLHS---E 143
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
I RD K +N+L +E KL DF +
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 17/129 (13%)
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
YA+ + R F K + + + EY G+L D I ++ Q + E ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE------YWRL 121
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF 225
+ I A++Y+H + +I RD K NI +E K+ DF + ++ R+
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH--------RSL 170
Query: 226 DLARLNEDD 234
D+ +L+ +
Sbjct: 171 DILKLDSQN 179
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVIEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 132
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 133 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 182
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 120
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 55 IATNNYDSEKVIMKRSFYTLYKGFCQER----LISVMKFDAS-KPRMYDCCINNIVYASQ 109
+ +N++ +V+ K SF + +E + V+K D + +C + S
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 110 MIHRCFFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AK 167
+ F + CC +T + V E++N G L I Q R + A
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--------QKSRRFDEARARFYAA 131
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ +LH + +I+RD KL N+L + E KL DF
Sbjct: 132 EIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFG 169
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 120
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 121 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 120
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 121 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 117 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 117 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF +
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 117
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 118 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 161
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 56/149 (37%), Gaps = 35/149 (23%)
Query: 87 MKFDASKPRMYDCCINNIVYASQMIHRCF----------------FKLIGCCLETQIPIL 130
++ DA+ RM + YAS+ HR F L+G C L
Sbjct: 48 LRMDAAIKRMKE-------YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 100
Query: 131 VFEYINCGSLADRIR----IQHNP-----QPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
EY G+L D +R ++ +P L L A D+A + YL
Sbjct: 101 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---Q 157
Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ I R+ NIL E VAK+ DF S
Sbjct: 158 KQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 119
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 120 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 163
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------- 119
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ Y + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
+ ++K DA++ + D + H+ L+G C + ++ Y + G+L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREY 131
Query: 144 IRIQHNPQPQH---------EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNI 194
+R + P ++ E + + +A + YL + I RD N+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188
Query: 195 LFNEENVAKLFDFSFSISI 213
L E NV K+ DF + I
Sbjct: 189 LVTENNVMKIADFGLARDI 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 27/130 (20%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
++ H +L E I +V EY++ GSL D ++ + + L L + +A
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQ 371
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
IA+ +AY+ + RD + +NIL E V K+ DF LA
Sbjct: 372 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG------------------LA 410
Query: 229 RLNEDDGYVA 238
RL ED+ Y A
Sbjct: 411 RLIEDNEYTA 420
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
+P +V EY++ +L D + + P+ +++ D A+ + H +I
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISI 213
RD K +NIL + N K+ DF + +I
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAI 166
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------- 119
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
PL LKI A+ ++H P P+I RD K+ N+L + + KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 165
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V EY+ GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLG 194
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 114
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 115 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 164
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 141
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 142 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 191
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 123
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 164
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 141
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 142 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 112
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 113 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 156
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADR 143
++V K D K + + N +V H + L +V E++ G+L D
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 144 IRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 203
+ + Q + L+ + A++YLH + VI RD K +IL + K
Sbjct: 133 VTHTRMNEEQIATVCLS--------VLRALSYLH---NQGVIHRDIKSDSILLTSDGRIK 181
Query: 204 LFDFSF----SISIPEGELLTG 221
L DF F S +P+ + L G
Sbjct: 182 LSDFGFCAQVSKEVPKRKXLVG 203
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 127
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 168
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 128 PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
PI +V EY++ GSL D ++ + + L L + +A IA+ +AY+ +
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
RD + +NIL E V K+ DF LARL ED+ Y A
Sbjct: 304 RDLRAANILVGENLVCKVADFG------------------LARLIEDNEYTA 337
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 128 PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
PI +V EY++ GSL D ++ + + L L + +A IA+ +AY+ +
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
RD + +NIL E V K+ DF LARL ED+ Y A
Sbjct: 304 RDLRAANILVGENLVCKVADFG------------------LARLIEDNEYTA 337
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 82 IVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 133
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 134 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 164
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
+P +V EY++ +L D + + P+ +++ D A+ + H +I
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISI 213
RD K +NI+ + N K+ DF + +I
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 128 PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
PI +V EY++ GSL D ++ + + L L + +A IA+ +AY+ +
Sbjct: 252 PIYIVGEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
RD + +NIL E V K+ DF LARL ED+ Y A
Sbjct: 304 RDLRAANILVGENLVCKVADFG------------------LARLIEDNEYTA 337
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
+P +V EY++ +L D + + P+ +++ D A+ + H +I
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISI 213
RD K +NI+ + N K+ DF + +I
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRD 188
LV E +N G L +RI+ + + T I + + +A++++H VG V+ RD
Sbjct: 83 LVMELLNGGELFERIK-------KKKHFSETEASYIMRKLVSAVSHMHDVG----VVHRD 131
Query: 189 FKLSNILFNEEN---VAKLFDFSFS 210
K N+LF +EN K+ DF F+
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFA 156
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 122
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 163
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 95 RMYDCCIN---NIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-P 150
R DC N I + H K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 151 QPQHEPLLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 210 S 210
+
Sbjct: 151 A 151
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
+P +V EY++ +L D + + P+ +++ D A+ + H +I
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISI 213
RD K +NI+ + N K+ DF + +I
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 122
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 163
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 80 IVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 131
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 132 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 162
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 165
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 78 IVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 129
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 130 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 160
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
+P +V EY++ +L D + + P+ +++ D A+ + H +I
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISI 213
RD K +NI+ + N K+ DF + +I
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 82 RLISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLA 141
R ++V D K + + N +V H ++ L + ++ E++ G+L
Sbjct: 71 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 142 DRI-RIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEEN 200
D + +++ N + + + + A+AYLH + VI RD K +IL +
Sbjct: 131 DIVSQVRLNEE---------QIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDG 178
Query: 201 VAKLFDFSF----SISIPEGELLTG 221
KL DF F S +P+ + L G
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKXLVG 203
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 15/142 (10%)
Query: 84 ISVMKFDASKPRMYDCCINNIVYASQMIHRCFFKLIGCCLETQI-----PILVFEYINCG 138
+ MK D S R + ++ H +L+G C+E P+++ ++ G
Sbjct: 67 VKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYG 126
Query: 139 SLADRI---RIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL 195
L + R++ P+H P L LK DIA + YL R + RD N +
Sbjct: 127 DLHTYLLYSRLETG--PKHIP--LQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCM 179
Query: 196 FNEENVAKLFDFSFSISIPEGE 217
++ + DF S I G+
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGD 201
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 110 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+N GSL D ++ + + L L + ++ IA+ +AY+ + RD
Sbjct: 86 IVTEYMNKGSLLDFLKGETG-----KYLRLPQLVDMSAQIASGMAYVER---MNYVHRDL 137
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ + A
Sbjct: 138 RAANILVGENLVCKVADFG------------------LARLIEDNEWTA 168
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 95 RMYDCCIN---NIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-P 150
R DC N I + H K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 151 QPQHEPLLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 210 S 210
+
Sbjct: 152 A 152
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 165
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 123
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 164
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 120
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 161
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 135
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 176
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 127
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 168
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 110 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 110 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVCEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G + ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------- 120
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S+ P T
Sbjct: 121 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 110 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 127 IPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
+P +V EY++ +L D + + P+ +++ D A+ + H +I
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIH 156
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISI 213
RD K +NI+ + N K+ DF + +I
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAI 183
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 95 RMYDCCIN---NIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-P 150
R DC N I + H K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 151 QPQHEPLLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 210 S 210
+
Sbjct: 151 A 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 165
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 112 HRCFFKLIGCCLETQIP------ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
HR G ++ P LV E+ GS+ D I+ + E + I
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----I 134
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
++I +++LH VI RD K N+L E KL DF S +
Sbjct: 135 CREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 122
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 122
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 163
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G + ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------- 120
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 127
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 168
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 95 RMYDCCIN---NIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-P 150
R DC N I + + H K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 151 QPQHEPLLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 210 S 210
+
Sbjct: 152 A 152
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 63/167 (37%), Gaps = 38/167 (22%)
Query: 49 SAKELEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCIN---NIV 105
+A E+++A N E V +K I MK R DC N I
Sbjct: 18 AAGEVQLAVNRVTEEAVAVK---------------IVDMK------RAVDCPENIKKEIC 56
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEPLLLTHRLK 164
+ H K G E I L EY + G L DRI P+P + H+L
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQL- 113
Query: 165 IAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ YLH +G + RD K N+L +E + K+ DF +
Sbjct: 114 -----MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 82 RLISVMKF-DASKPRMYD-CCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGS 139
R++++ KF ++ +M + I Q+ H L+ C + + LVFE+++
Sbjct: 51 RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110
Query: 140 LADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 199
L D ++ P ++ + +I N I + H +I RD K NIL ++
Sbjct: 111 LDD---LELFPNGLDYQVVQKYLFQII----NGIGFCH---SHNIIHRDIKPENILVSQS 160
Query: 200 NVAKLFDFSFSISI 213
V KL DF F+ ++
Sbjct: 161 GVVKLCDFGFARTL 174
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 126
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 167
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q + +LL +A I++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQISS 127
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 168
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 53 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 107
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 108 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 110 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
++ H +L+G C ++ E++ G+L D +R + N Q +LL +A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQ 124
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
I++A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 168
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 122
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 163
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 122
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 163
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 120
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 161
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L+G C ++ E++ G+L D +R + N Q +LL +A I++
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQISS 120
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
A+ YL + I RD N L E ++ K+ DF S L+TG
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLMTG 161
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVIEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGE 217
+ +NIL E V K+ DF + I + E
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 108 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 158
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 159 ATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 108 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 158
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 159 ATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 93 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 143
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 97 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 147
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 148 ATRNILVENENRVKIGDFGLTKVLPQ 173
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 90 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 96 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 146
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 147 ATRNILVENENRVKIGDFGLTKVLPQ 172
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 109 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 98 DCCINNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHN-PQPQHEP 156
+ CIN + + H K G E I L EY + G L DRI P+P +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 157 LLLTHRLKIAKDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H+L + YLH +G + RD K N+L +E + K+ DF +
Sbjct: 110 FF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 88 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 138
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 139 ATRNILVENENRVKIGDFGLTKVLPQ 164
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 90 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ GSL D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 AAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ G L D I +H + E ++ + I +A+ Y H V+ RD
Sbjct: 88 MVMEYVSGGELFDYI-CKHGRVEEMEAR------RLFQQILSAVDYCHRHM---VVHRDL 137
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELL 219
K N+L + AK+ DF S + +GE L
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFL 167
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H +L E I I V EY++ GSL D ++ + + L L + +A IA+
Sbjct: 62 HEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIAS 115
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
+AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 116 GMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 158
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 121 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 171
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 172 ATRNILVENENRVKIGDFGLTKVLPQ 197
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 95 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 145
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 146 ATRNILVENENRVKIGDFGLTKVLPQ 171
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 89 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 139
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 140 ATRNILVENENRVKIGDFGLTKVLPQ 165
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ G L D I +H + E ++ + I +A+ Y H V+ RD
Sbjct: 88 MVMEYVSGGELFDYI-CKHGRVEEMEAR------RLFQQILSAVDYCHRHM---VVHRDL 137
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELL 219
K N+L + AK+ DF S + +GE L
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFL 167
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
K G L+ ++ EY+ GS D +R + Q +L K+I + YL
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML--------KEILKGLDYL 136
Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
H I RD K +N+L +E+ KL DF +
Sbjct: 137 H---SEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 90 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
V EY+N G L I+ + +PQ + A +I+ + +LH R +I+RD
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQ--------AVFYAAEISIGLFFLH---KRGIIYRD 145
Query: 189 FKLSNILFNEENVAKLFDFS 208
KL N++ + E K+ DF
Sbjct: 146 LKLDNVMLDSEGHIKIADFG 165
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+VFE +N G + + P +PL +D+ I YLH + +I RD
Sbjct: 115 MVFELVNQGPVMEV--------PTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDI 163
Query: 190 KLSNILFNEENVAKLFDFSFS 210
K SN+L E+ K+ DF S
Sbjct: 164 KPSNLLVGEDGHIKIADFGVS 184
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDI 169
H LI + LVF+ + G L D + E + L+ + I + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT---------EKVALSEKETRSIMRSL 209
Query: 170 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGL 222
A+++LH ++ RD K NIL ++ +L DF FS + GE L L
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL 259
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I RD
Sbjct: 94 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 144
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 145 ATRNILVENENRVKIGDFGLTKVLPQ 170
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V E + GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 117
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ +F +S+ P T
Sbjct: 118 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT 167
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V E + GSL +R +H+ Q + + + +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 125
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 126 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 97/271 (35%), Gaps = 36/271 (13%)
Query: 59 NYDSEKVIMKRSFYTLYKGFC-----QERLISVMKFDASKPRMYDCCINNIVYASQMIHR 113
N+ EK I + F +Y+ C L V FD + CI I Q+ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIAN 171
K +E +V E + G L+ I+ + + L+ R K + +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIK-----HFKKQKRLIPERTVWKYFVQLCS 147
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS----FSISIPEGELLTGLRAFDL 227
A+ ++H R V+ RD K +N+ V KL D FS L G +
Sbjct: 148 ALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMS 204
Query: 228 ARLNEDDGYVALRD------------HVKKYFEEDRLN--EIIDPLIMGDRSCSGKEQQL 273
++GY D ++ F D++N + + D +
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 274 QAYAHLIFECVNESPVDRPTMV---DVAKKL 301
+ L+ C+N P RP + DVAK++
Sbjct: 265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
+++RD K NIL ++ ++ D ++ +PEG+ + G
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 116
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ DF +S P T
Sbjct: 117 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT 166
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ G L D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVMEYMSKGCLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 128 PI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIF 186
PI +V EY++ GSL D ++ + + L L + +A IA+ +AY+ +
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVH 304
Query: 187 RDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
RD + +NIL E V K+ DF L RL ED+ Y A
Sbjct: 305 RDLRAANILVGENLVCKVADFG------------------LGRLIEDNEYTA 338
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
+++RD K NIL ++ ++ D ++ +PEG+ + G
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
S + H +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
++ANA++Y H + VI RD K N+L K+ +F +S+ P T
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT 168
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 49 SAKELEIATNNYDSEKVIMKRSF--YTLYKGFCQERLISVMKFDASK--PRMYDCCINNI 104
SA + + NY +K I K +F L + R ++V D ++ P +
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREV 65
Query: 105 VYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLK 164
+ H KL + LV EY + G + D + + H + E R K
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAK 119
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ I +A+ Y H + ++ RD K N+L + + K+ DF FS
Sbjct: 120 F-RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE----L 218
L I IA A+ +LH + ++ RD K SNI F ++V K+ DF ++ + E +
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 219 LTGLRAF 225
LT + A+
Sbjct: 224 LTPMPAY 230
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 64 KVIMKRSFYTLYKGFCQE-----RLISVMKF--DASKPRMYDCCINNIVYASQMIHRCFF 116
KV+ +F T+YKG ++ +K + + P+ ++ + + M H
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
+L+G CL I LV + + G L + + +H + LLL ++IAK + YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQ-LLLNWCVQIAK----GMMYL 156
Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGY 236
R ++ RD N+L N K+ DF + LL G D N D G
Sbjct: 157 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLA------RLLEG----DEKEYNADGGK 203
Query: 237 VALR 240
+ ++
Sbjct: 204 MPIK 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE----L 218
L I IA A+ +LH + ++ RD K SNI F ++V K+ DF ++ + E +
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 219 LTGLRAF 225
LT + A+
Sbjct: 178 LTPMPAY 184
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 491
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 492 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 490
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 491 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 131 IKLENLMLDKDGHIKITDFGL 151
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 27/184 (14%)
Query: 64 KVIMKRSFYTLYKGFCQERLISV-------MKFDASKPRMYDCCINNIVYASQMIHRCFF 116
KV+ +F T+YKG +V + + + P+ ++ + + M H
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYL 176
+L+G CL I LV + + G L + + +H + LLL ++IAK + YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQ-LLLNWCVQIAK----GMMYL 133
Query: 177 HVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGY 236
R ++ RD N+L N K+ DF + LL G D N D G
Sbjct: 134 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLA------RLLEG----DEKEYNADGGK 180
Query: 237 VALR 240
+ ++
Sbjct: 181 MPIK 184
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 85 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 133
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 134 IKLENLMLDKDGHIKITDFGL 154
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 131 IKLENLMLDKDGHIKITDFGL 151
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 115 FFKLIGCCLETQIPI-LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANA 172
F + C +T + V EY+N G L I+ + +P H + A +IA
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP--------HAVFYAAEIAIG 133
Query: 173 IAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+ +L + +I+RD KL N++ + E K+ DF
Sbjct: 134 LFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFG 166
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 126
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 127 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 87 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 135
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 136 IKLENLMLDKDGHIKITDFGL 156
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 138
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 139 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 115 FFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
F + C +T+ + V EY+N G L I+ H L+ A +I +
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-------FDLSRATFYAAEIILGL 132
Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+LH + +++RD KL NIL +++ K+ DF
Sbjct: 133 QFLH---SKGIVYRDLKLDNILLDKDGHIKIADFG 164
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ G L D ++ + + L L + +A IA+ +AY+ + RD
Sbjct: 89 IVTEYMSKGCLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
+ +NIL E V K+ DF LARL ED+ Y A
Sbjct: 141 RAANILVGENLVCKVADFG------------------LARLIEDNEYTA 171
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 132
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 133 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 131 IKLENLMLDKDGHIKITDFGL 151
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 131 IKLENLMLDKDGHIKITDFGL 151
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 189 FKLSNILFNEENVAKLFDFSF 209
KL N++ +++ K+ DF
Sbjct: 131 IKLENLMLDKDGHIKITDFGL 151
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 148
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 149 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 148
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 149 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 132
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 133 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 146
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 147 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 63 EKVIMKRSFYTLYKGFCQ------ERLISVMKFDASKPRMYDCCINNIVYASQMIHRCFF 116
+K + +F T+ KG+ Q + ++K +A+ P + D + Q+ +
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 117 KLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLL-LTHRLKIAKDIANAIAY 175
++IG C E + +LV E G L + Q N + + ++ L H++ + +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF 128
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H RD N+L ++ AK+ DF S ++
Sbjct: 129 VH---------RDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 115 FFKLIGCCLETQIPIL-VFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
F + C +T+ + V EY+N G L I+ H L+ A +I +
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-------FDLSRATFYAAEIILGL 131
Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+LH + +++RD KL NIL +++ K+ DF
Sbjct: 132 QFLH---SKGIVYRDLKLDNILLDKDGHIKIADFG 163
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 115 FFKLIGCCLETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
F + C +T + V EY+N G L I+ Q H + A +IA +
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-------QVGRFKEPHAVFYAAEIAIGL 455
Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+L + +I+RD KL N++ + E K+ DF
Sbjct: 456 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFG 487
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 20/170 (11%)
Query: 53 LEIATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMI- 111
LEI E++I F +Y+ F ++V I N+ +++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 112 ---HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
H L G CL+ LV E+ G L + + P P +L + A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP-----PDILVNW---AVQ 113
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFSFS 210
IA + YLH P+I RD K SNIL ++ + K+ DF +
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ H + H LL + I + YL + I RD
Sbjct: 93 LIMEYLPYGSLRDYLQA-HAERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 143
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S++ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 147
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKF-RQIVS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKF-RQIVS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G +++ ++V E + GSL +R +H+ Q + + + +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQ-----FTVIQLVGMLR 154
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
IA+ + YL + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKF-RQIVS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKF-RQIVS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
++ H +L+G C ++ E++ G+L D +R + N Q + +LL +A
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQ 323
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
I++A+ YL + I R+ N L E ++ K+ DF S L+TG
Sbjct: 324 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS------RLMTG 367
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKF-RQIVS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGWMKEKEA-----RAKF-RQIVS 117
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S++ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 161
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIAN 171
H KL + LV EY + G + D + + H + E R K + I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEA-----RAKF-RQIVS 124
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY+ GSL D ++ +H + H LL + I + YL + I R+
Sbjct: 91 LIMEYLPYGSLRDYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRNL 141
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 142 ATRNILVENENRVKIGDFGLTKVLPQ 167
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
+++A+A+ Y H R VI RD K N+L + K+ DF +S+ P
Sbjct: 121 EELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
+++A+A+ Y H R VI RD K N+L + K+ DF +S+ P
Sbjct: 122 EELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 166
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
L+ +YIN G L H Q + H ++I +I A+ +LH +I+RD
Sbjct: 136 LILDYINGGEL-----FTHLSQRER---FTEHEVQIYVGEIVLALEHLH---KLGIIYRD 184
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
KL NIL + L DF S
Sbjct: 185 IKLENILLDSNGHVVLTDFGLS 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
++ H +L+G C ++ E++ G+L D +R + N Q + +LL +A
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLY----MATQ 365
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
I++A+ YL + I R+ N L E ++ K+ DF S L+TG
Sbjct: 366 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS------RLMTG 409
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
+++A+A+ Y H R VI RD K N+L + K+ DF +S+ P
Sbjct: 121 EELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
KIA I A+ +LH VI RD K SN+L N K+ DF S
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 106 YASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI 165
YA+ + R F K + + + EY +L D I ++ Q + E ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE------YWRL 121
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAF 225
+ I A++Y+H + +I RD K NI +E K+ DF + ++ R+
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH--------RSL 170
Query: 226 DLARLNEDD 234
D+ +L+ +
Sbjct: 171 DILKLDSQN 179
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
V +YIN G L + Q E L R + A +IA+A+ YLH +++RD
Sbjct: 116 FVLDYINGGELFYHL--------QRERCFLEPRARFYAAEIASALGYLHS---LNIVYRD 164
Query: 189 FKLSNILFNEENVAKLFDFSF 209
K NIL + + L DF
Sbjct: 165 LKPENILLDSQGHIVLTDFGL 185
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G ++ ++V EY+ GSL +R H+ Q + + + +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQ-----FTIMQLVGMLR 158
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ + YL +G+ + RD N+L + V K+ DF S
Sbjct: 159 GVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 164
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 165 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
Q H +L G ++ ++V EY+ GSL +R H+ Q + + + +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQ-----FTIMQLVGMLR 158
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ + YL +G+ + RD N+L + V K+ DF S
Sbjct: 159 GVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
++ H +L+G C ++ E++ G+L D +R + N Q +LL +A
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLY----MATQ 326
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
I++A+ YL + I R+ N L E ++ K+ DF S L+TG
Sbjct: 327 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS------RLMTG 370
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
KIA I A+ +LH VI RD K SN+L N K+ DF S
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 173
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 174 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 220
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 163
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 164 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 210
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 147
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI 194
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 123 LETQIPI-LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFP 181
LET I +V EY G L D I I + + E + + + I +A+AY+H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRV------VFRQIVSAVAYVH---S 126
Query: 182 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
+ RD K N+LF+E + KL DF P+G
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKG 160
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 110 MIHRCFFKLIGCCLE--TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H K G C E L+ E++ GSL + + N + L +LK A
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK------INLKQQLKYAV 133
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
I + YL R + RD N+L E+ K+ DF + +I
Sbjct: 134 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 153
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 154 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 130 LVFEYINCGSLADRIR-----IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPV 184
LV + ++ GS+ D I+ +H E + T I +++ + YLH
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT----ILREVLEGLEYLH---KNGQ 142
Query: 185 IFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
I RD K NIL E+ ++ DF S + G +T
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 147
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 187
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 188 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 130 LVFEYINCGSLADRIR-----IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPV 184
LV + ++ GS+ D I+ +H E + T I +++ + YLH
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT----ILREVLEGLEYLH---KNGQ 137
Query: 185 IFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
I RD K NIL E+ ++ DF S + G +T
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I+ A+ +LH + +I+RD K NI+ N + KL DF
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I+ A+ +LH + +I+RD K NI+ N + KL DF
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++A A+ +LH +I+RD K NIL +EE KL DF S
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 146
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 160 THRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS 212
H+ + + I YLH G ++ RD K SNIL N E K+ DF S S
Sbjct: 109 VHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+N GSL D ++ + L L + + +A +A +AY+ I RD
Sbjct: 80 IVTEYMNKGSLLDFLK-----DGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDL 131
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGE 217
+ +NIL + K+ DF + I + E
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNE 159
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++A A+ +LH +I+RD K NIL +EE KL DF S
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 161
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 146
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 110 MIHRCFFKLIGCCLE--TQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAK 167
+ H K G C E L+ E++ GSL + + N + L +LK A
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK------INLKQQLKYAV 121
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
I + YL R + RD N+L E+ K+ DF + +I
Sbjct: 122 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 138
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 139 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 185
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 108 SQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQP-QHEPLLLTHRLKIA 166
S+ H+ + IG L++ ++ E + G L +R + P+P Q L + L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 161
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 213
+DIA YL I RD N L VAK+ DF + I
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++A A+ +LH +G +I+RD K NIL +EE KL DF S
Sbjct: 134 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+ GSL D + + Q + ++ A+ +LH VI RD
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 142
Query: 190 KLSNILFNEENVAKLFDFSFSISI-PE 215
K NIL + KL DF F I PE
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE 169
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 165 IAKDIANAIAYLHVGFP-------RPVI-FRDFKLSNILFNEENVAKLFDFSFSISIPEG 216
+A+ ++ ++YLH P +P I RDFK N+L + A L DF ++ G
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 217 E 217
+
Sbjct: 177 K 177
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY++ G L D I ++ L ++ + I + + Y H V+ RD
Sbjct: 93 MVMEYVSGGELFDYI-------CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDL 142
Query: 190 KLSNILFNEENVAKLFDFSFSISIPEGELL 219
K N+L + AK+ DF S + +GE L
Sbjct: 143 KPENVLLDAHMNAKIADFGLSNMMSDGEFL 172
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+ GSL D + + Q + ++ A+ +LH VI RD
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 142
Query: 190 KLSNILFNEENVAKLFDFSFSISI-PE 215
K NIL + KL DF F I PE
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE 169
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+ GSL D + + Q + ++ A+ +LH VI RD
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 142
Query: 190 KLSNILFNEENVAKLFDFSFSISI-PE 215
K NIL + KL DF F I PE
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE 169
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-----IQHNPQPQHEPLLLTHR--LK 164
H L+G C +++ EY G L + +R ++ +P L+ R L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ +A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+ GSL D + + Q + ++ A+ +LH VI RD
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 143
Query: 190 KLSNILFNEENVAKLFDFSFSISI-PE 215
K NIL + KL DF F I PE
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE 170
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
LVF+ + G L D + E + L+ + KI + + I LH ++ R
Sbjct: 88 LVFDLMKKGELFDYLT---------EKVTLSEKETRKIMRALLEVICALH---KLNIVHR 135
Query: 188 DFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
D K NIL +++ KL DF FS + GE L
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 167
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL + + K +A+ YLH +I RD K NILF + KL DF S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL + + K +A+ YLH +I RD K NILF + KL DF S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRI----QHNPQPQHEPLLLTHRLKI 165
+H F + ET+ + LV +N G + R I + NP Q EP + + +I
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQ-EPRAIFYTAQI 298
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
+ + +LH R +I+RD K N+L +++ ++ D ++ + G+ T
Sbjct: 299 V----SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL + + K +A+ YLH +I RD K NILF + KL DF S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I +A+ YLH + V++RD KL N++ +++ K+ DF
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
LVF+ + G L D + E + L+ + KI + + I LH ++ R
Sbjct: 101 LVFDLMKKGELFDYLT---------EKVTLSEKETRKIMRALLEVICALH---KLNIVHR 148
Query: 188 DFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
D K NIL +++ KL DF FS + GE L
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 180
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRI----QHNPQPQHEPLLLTHRLKI 165
+H F + ET+ + LV +N G + R I + NP Q EP + + +I
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQ-EPRAIFYTAQI 298
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
+ + +LH R +I+RD K N+L +++ ++ D ++ + G+ T
Sbjct: 299 V----SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I +A+ YLH + V++RD KL N++ +++ K+ DF
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRI----QHNPQPQHEPLLLTHRLKI 165
+H F + ET+ + LV +N G + R I + NP Q EP + + +I
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQ-EPRAIFYTAQI 298
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
+ + +LH R +I+RD K N+L +++ ++ D ++ + G+ T
Sbjct: 299 V----SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHR--LKIAKDIANAIAYLHVGFPRPVIFR 187
LVF+ + G L D + E + L+ + KI + + I LH ++ R
Sbjct: 101 LVFDLMKKGELFDYLT---------EKVTLSEKETRKIMRALLEVICALH---KLNIVHR 148
Query: 188 DFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
D K NIL +++ KL DF FS + GE L
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 180
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 19/118 (16%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQ------------HNPQP----QHE 155
H L+G C +++ EY G L + +R + +P+
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
PL L L + +A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 165 IAKDIANAIAYLHVGFP------RPVI-FRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
IA+ +A +AYLH P +P I RD K N+L A + DF ++ G+
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I +A+ YLH + V++RD KL N++ +++ K+ DF
Sbjct: 114 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 111 IHRCFFKLIGCCLETQIPI-LVFEYINCGSLADRIRI----QHNPQPQHEPLLLTHRLKI 165
+H F + ET+ + LV +N G + R I + NP Q EP + + +I
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQ-EPRAIFYTAQI 298
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLT 220
+ + +LH R +I+RD K N+L +++ ++ D ++ + G+ T
Sbjct: 299 V----SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 56 ATNNYDSEKVIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
A + D + ++KR Y K + + ++ K D Y+ C + Y + +
Sbjct: 30 AKHRIDGKTYVIKRVKYNNEK--AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87
Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
+ CL Q+ E+ + G+L I + + E L L++ + I + Y
Sbjct: 88 SRSKTKCLFIQM-----EFCDKGTLEQWIE-----KRRGEKLDKVLALELFEQITKGVDY 137
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+H + +I RD K SNI + K+ DF S+
Sbjct: 138 IH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ N IAY H R V+ RD K N+L N E K+ DF +
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ N IAY H R V+ RD K N+L N E K+ DF +
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I +A+ YLH + V++RD KL N++ +++ K+ DF
Sbjct: 115 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ N IAY H R V+ RD K N+L N E K+ DF +
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR 223
++ + + N + Y+H ++ RD K +N+L + V KL DF + R
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------R 173
Query: 224 AFDLARLNEDDGY 236
AF LA+ ++ + Y
Sbjct: 174 AFSLAKNSQPNRY 186
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 155 EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
EP+ + + + +A + +L R I RD NIL +E NV K+ DF + I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDI 249
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 166 AKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
+I +A+ YLH + V++RD KL N++ +++ K+ DF
Sbjct: 116 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ E++ GSL + ++ +H + H LL + I + YL + I RD
Sbjct: 93 LIMEFLPYGSLREYLQ-KHKERIDHIKLL-----QYTSQICKGMEYLGT---KRYIHRDL 143
Query: 190 KLSNILFNEENVAKLFDFSFSISIPE 215
NIL EN K+ DF + +P+
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR 223
++ + + N + Y+H ++ RD K +N+L + V KL DF + R
Sbjct: 128 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------R 172
Query: 224 AFDLARLNEDDGY 236
AF LA+ ++ + Y
Sbjct: 173 AFSLAKNSQPNRY 185
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 156 PLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
PL + + K +A+ YLH +I RD K NILF + KL DF S
Sbjct: 104 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR 223
++ + + N + Y+H ++ RD K +N+L + V KL DF + R
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------R 173
Query: 224 AFDLARLNEDDGY 236
AF LA+ ++ + Y
Sbjct: 174 AFSLAKNSQPNRY 186
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY + G + D + + H + E R K + I +A+ Y H + ++ RD
Sbjct: 88 LIMEYASGGEVFDYL-VAHGRMKEKEA-----RSKF-RQIVSAVQYCH---QKRIVHRDL 137
Query: 190 KLSNILFNEENVAKLFDFSFS 210
K N+L + + K+ DF FS
Sbjct: 138 KAENLLLDADMNIKIADFGFS 158
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLR 223
++ + + N + Y+H ++ RD K +N+L + V KL DF + R
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------R 173
Query: 224 AFDLARLNEDDGY 236
AF LA+ ++ + Y
Sbjct: 174 AFSLAKNSQPNRY 186
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
L+ EY + G + D + + H + E R K + I +A+ Y H + ++ RD
Sbjct: 91 LIMEYASGGEVFDYL-VAHGRMKEKEA-----RSKF-RQIVSAVQYCH---QKRIVHRDL 140
Query: 190 KLSNILFNEENVAKLFDFSFS 210
K N+L + + K+ DF FS
Sbjct: 141 KAENLLLDADMNIKIADFGFS 161
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 168 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++A + +LH +G +I+RD K NIL +EE KL DF S
Sbjct: 138 ELALGLDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
KIA I A+ +LH VI RD K SN+L N K DF S
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 155 EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+PL L H + + Y+H VI RD K SN+L NE K+ DF +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 195 LTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 197 LTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 157 LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 155 EPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+PL L H + + Y+H VI RD K SN+L NE K+ DF +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 125 TQIPI-LVFEYINCGSLADRIRI-QHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
T+ PI ++ E++ GSL D ++ + + QP L + + IA +A++ R
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 303
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
I RD + +NIL + V K+ DF + I + E
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 24/168 (14%)
Query: 60 YDSEKVIMKRSFYTLYKGFCQER----LISVMKFDASK--PRMYDCCINNIVYASQMIHR 113
Y+ I + S+ ++K C+ R ++++ KF S+ P + + I Q+ H
Sbjct: 5 YEKIGKIGEGSYGVVFK--CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 114 CFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAI 173
L+ + LVFEY + L + R Q P+H L+ I A+
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEH---LVK---SITWQTLQAV 115
Query: 174 AYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTG 221
+ H I RD K NIL + +V KL DF F+ LLTG
Sbjct: 116 NFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFA------RLLTG 154
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 29/116 (25%)
Query: 125 TQIPI-LVFEYINCGSLADRIRI-QHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
T+ PI ++ E++ GSL D ++ + + QP L + + IA +A++ R
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIEQ---R 130
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLARLNEDDGYVA 238
I RD + +NIL + V K+ DF LAR+ ED+ Y A
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFG------------------LARVIEDNEYTA 168
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 178
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 182
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 180
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 178
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 153
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +E+ ++ DF F+
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFA 175
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V EY+ GSL D + + Q + ++ A+ +LH VI R+
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRNI 143
Query: 190 KLSNILFNEENVAKLFDFSFSISI-PE 215
K NIL + KL DF F I PE
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE 170
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 159
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS 212
+ YLH + ++ RD K +N+L +E V KL DF + S
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 153
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 152
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
K+ I A+ YL VI RD K SNIL +E KL DF S
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 154
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 168 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 208
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 118 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 155
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGEL 218
I + + +A+ YL + + +I RD K NI+ E+ KL DF + + G+L
Sbjct: 135 IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL 185
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR-----IQHNPQPQHEPLLLTHR--LK 164
H L+G C +++ EY G L + +R ++ +P + R L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ +A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 70 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 122
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 123 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISIPEGELL 219
+I KD+ +A+AY H V RD K N LF + ++ KL DF + G+++
Sbjct: 110 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 164 KIAKDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISIPEGELL 219
+I KD+ +A+AY H V RD K N LF + ++ KL DF + G+++
Sbjct: 127 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 182
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 72 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 124
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 125 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ K+ DF F+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFA 188
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 95 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 147
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 148 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 64 KVIMKRSFYTLYKGFC---QERL-----ISVMKFDASKPRMYDCCINNIVYASQMIHRCF 115
KV+ +F T+YKG E + I V++ + S P+ ++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYV 81
Query: 116 FKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAY 175
+L+G CL + + LV + + G L D +R + LL ++IAK ++Y
Sbjct: 82 SRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQD--LLNWCMQIAK----GMSY 134
Query: 176 LHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
L ++ RD N+L N K+ DF +
Sbjct: 135 LE---DVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 69 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 121
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 122 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 119
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 119
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 64 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 116
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 117 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE++ K+ DF LA
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFG------------------LA 178
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 179 RHTDDEMTGYVATR 192
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 125 TQIPI-LVFEYINCGSLADRIRI-QHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPR 182
T+ PI ++ E++ GSL D ++ + + QP L + + IA +A++ R
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIEQ---R 297
Query: 183 PVIFRDFKLSNILFNEENVAKLFDFSFS 210
I RD + +NIL + V K+ DF +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE++ K+ DF LA
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFG------------------LA 174
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 175 RHTDDEMTGYVATR 188
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 16/115 (13%)
Query: 112 HRCFFKLIGCCLETQ------IPILVFEYINCGSLADRI---RIQHNPQPQHEPLLLTHR 162
H KL+G L ++ IP+++ ++ G L + RI NP + PL R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF--NLPLQTLVR 141
Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 217
+ DIA + YL R I RD N + E+ + DF S I G+
Sbjct: 142 FMV--DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 19/118 (16%)
Query: 112 HRCFFKLIGCCLETQIPILVFEYINCGSLADRIR----------IQHNPQPQHEP----- 156
H L+G C + L+FEY G L + +R I++ Q + E
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 157 -LLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L L A +A + +L + + RD N+L V K+ DF + I
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 499
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 119
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ K+ DF F+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFA 188
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 187
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFA 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
LV EY+ G L D ++ +H L RL + + I + YL R + RD
Sbjct: 91 LVMEYLPSGCLRDFLQ-------RHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRD 140
Query: 189 FKLSNILFNEENVAKLFDFSFSISIP 214
NIL E K+ DF + +P
Sbjct: 141 LAARNILVESEAHVKIADFGLAKLLP 166
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ K+ DF F+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFA 188
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
LV EY+ G L D ++ +H L RL + + I + YL R + RD
Sbjct: 103 LVMEYLPSGCLRDFLQ-------RHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRD 152
Query: 189 FKLSNILFNEENVAKLFDFSFSISIP 214
NIL E K+ DF + +P
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLP 178
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
LV EY+ G L D ++ +H L RL + + I + YL R + RD
Sbjct: 87 LVMEYLPSGCLRDFLQ-------RHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRD 136
Query: 189 FKLSNILFNEENVAKLFDFSFSISIP 214
NIL E K+ DF + +P
Sbjct: 137 LAARNILVESEAHVKIADFGLAKLLP 162
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 499
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 171 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKI-AKDIANAIAYLHVGFPRPVIFRD 188
LV EY+ G L D ++ +H L RL + + I + YL R + RD
Sbjct: 90 LVMEYLPSGCLRDFLQ-------RHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRD 139
Query: 189 FKLSNILFNEENVAKLFDFSFSISIP 214
NIL E K+ DF + +P
Sbjct: 140 LAARNILVESEAHVKIADFGLAKLLP 165
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG------------------LA 183
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 184 RHTDDEMTGYVATR 197
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL ++ + + P
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----EAKRIPE 113
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + +AYL ++ RD K SNIL N KL DF S
Sbjct: 114 EILGKVSIA--VLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG------------------LA 177
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 178 RHTDDEMTGYVATR 191
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG------------------LA 177
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 178 RHTDDEMTGYVATR 191
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
Q H KLIG E + I + E G L ++++ L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 119
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
LV E + G L D+I ++ + E + H I + YLH + V+ RD
Sbjct: 98 LVTELMRGGELLDKI-LRQKFFSEREASFVLHT------IGKTVEYLH---SQGVVHRDL 147
Query: 190 KLSNILFNEEN----VAKLFDFSFS 210
K SNIL+ +E+ ++ DF F+
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFA 172
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 187
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFA 209
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
VI RD KL N+ NE+ K+ DF + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 187
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFA 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
VI RD KL N+ NE+ K+ DF + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 161
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFA 183
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 152
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFA 174
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
VI RD KL N+ NE+ K+ DF + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
LV E + G L D+I ++ + E + H I + YLH + V+ RD
Sbjct: 98 LVTELMRGGELLDKI-LRQKFFSEREASFVLH------TIGKTVEYLH---SQGVVHRDL 147
Query: 190 KLSNILFNEEN----VAKLFDFSFS 210
K SNIL+ +E+ ++ DF F+
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFA 172
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
VI RD KL N+ NE+ K+ DF + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
VI RD KL N+ NE+ K+ DF + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFSISI 213
VI RD KL N+ NE+ K+ DF + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 159
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFA 181
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 14/154 (9%)
Query: 65 VIMKRSFYTLYKGFCQERLISVMKFDASKPRMYDCCI-----NNIVYASQMIHRCFFKLI 119
++ K SF +Y+ + V K MY + N + Q+ H +L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 120 GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVG 179
++ LV E + G + ++ + P ++E H+ I + YLH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ------IITGMLYLH-- 129
Query: 180 FPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
++ RD LSN+L K+ DF + +
Sbjct: 130 -SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ K+ DF F+
Sbjct: 168 LKPENLLIDQQGYIKVADFGFA 189
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 201
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 202 RHTDDEMTGYVATR 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 123
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 124 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 159
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N+L +++ ++ DF F+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFA 181
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 130 LVFEYINCGSLADRI-RIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V E + G L D+I R + + + +L T I + YLH + V+ RD
Sbjct: 93 VVTELMKGGELLDKILRQKFFSEREASAVLFT--------ITKTVEYLHA---QGVVHRD 141
Query: 189 FKLSNILFNEEN----VAKLFDFSFS 210
K SNIL+ +E+ ++ DF F+
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFA 167
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 209
I + Y+H +I RD K SN+ NE++ K+ DF
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGL 171
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 131
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 132 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 163 LKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 213
L++ + I + Y+H + +I RD K SNI + K+ DF S+
Sbjct: 139 LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 178
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 179 RHTDDEMTGYVATR 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ ++ DF F+
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFA 188
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 174
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 175 RHTDDEMTGYVATR 188
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 178
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 179 RHTDDEMTGYVATR 192
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 174
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 175 RHTDDEMTGYVATR 188
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 184
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 185 RHTDDEMTGYVATR 198
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 178
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 179 RHTDDEMTGYVATR 192
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 192
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 193 RHTDDEMTGYVATR 206
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 179
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 180 RHTDDEMTGYVATR 193
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 184
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 185 RHTDDEMTGYVATR 198
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 184
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 185 RHTDDEMTGYVATR 198
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 174
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 175 RHTDDEMTGYVATR 188
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 195
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 196 RHTDDEMTGYVATR 209
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
I K + N+ +Y+H + + RD K SNIL ++ KL DF S
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 191
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 192 RHTDDEMTGYVATR 205
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 192
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 193 RHTDDEMTGYVATR 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 191
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 192 RHTDDEMTGYVATR 205
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 177
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 178 RHTDDEMTGYVATR 191
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 133 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 171
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 172 RHTDDEMTGYVATR 185
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRCFFKLI----GCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C I G + E+++ GSL D++ + P+
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 166
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 167 -ILGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 183
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 184 RHTDDEMTGYVATR 197
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 144 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 182
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 183 RHTDDEMTGYVATR 196
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 177
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 178 RHTDDEMTGYVATR 191
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 172 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF--SISIP 214
+AY H + V+ RD K N+L NE KL DF + SIP
Sbjct: 112 GLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 109 QMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKD 168
++ H K G C + +V EYI+ G L + +R + L + L++ D
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR------SHGKGLEPSQLLEMCYD 112
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ +A+L I RD N L + + K+ DF +
Sbjct: 113 VCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
+ I +A+ Y H ++ RD K N+L +E K+ DF S + +G L
Sbjct: 120 QQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 169
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 195
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 196 RHTDDEMXGYVATR 209
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 169
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 170 RHTDDEMTGYVATR 183
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 172
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 173 RHTDDEMTGYVATR 186
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 102 NNIVYASQMIHRCFFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPLLLTH 161
N I +Q+ H +L +LV EY++ G L DRI + + + +L
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM- 193
Query: 162 RLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNIL 195
K I I ++H + ++ D K NIL
Sbjct: 194 -----KQICEGIRHMHQMY---ILHLDLKPENIL 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
+ I +A+ Y H ++ RD K N+L +E K+ DF S + +G L
Sbjct: 119 QQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 168
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 169 RHTDDEMTGYVATR 182
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 107
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 108 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 168
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 169 RHTDDEMTGYVATR 182
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 132 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 170
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 171 RHTDDEMTGYVATR 184
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 168
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 169 RHTDDEMTGYVATR 182
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 169
Query: 229 RLNEDD--GYVALR 240
R +D+ GYVA R
Sbjct: 170 RHTDDEMTGYVATR 183
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
++++E+++ G L +++ +HN + E ++ + + + ++H + D
Sbjct: 230 VMIYEFMSGGELFEKVADEHNKMSEDE------AVEYMRQVCKGLCHMHENN---YVHLD 280
Query: 189 FKLSNILFNEE--NVAKLFDFSFSISI 213
K NI+F + N KL DF + +
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHL 307
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 129 ILVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
++++E+++ G L +++ +HN + E ++ + + + ++H + D
Sbjct: 124 VMIYEFMSGGELFEKVADEHNKMSEDE------AVEYMRQVCKGLCHMHENN---YVHLD 174
Query: 189 FKLSNILFNEE--NVAKLFDFSFSISI 213
K NI+F + N KL DF + +
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHL 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ K+ DF F+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFA 188
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
+ I +A+ Y H ++ RD K N+L +E K+ DF S + +G L
Sbjct: 110 QQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 159
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 167 KDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELL 219
+ I +A+ Y H ++ RD K N+L +E K+ DF S + +G L
Sbjct: 114 QQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 163
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 214
I +++A+A+ Y H + VI RD K N+L + K+ DF +S+ P
Sbjct: 128 IMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAP 174
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 184 VIFRDFKLSNILFNEENVAKLFDFSFS 210
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ K+ DF F+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFA 188
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 130 LVFEYINCGSLADRIR-IQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRD 188
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 189 FKLSNILFNEENVAKLFDFSFS 210
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 102 NNIVYASQMIHRC----FFKLIGCCLETQIPILVFEYINCGSLADRIRIQHNPQPQHEPL 157
N I+ Q++H C G + E+++ GSL D++ + P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 158 LLTHRLKIAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ ++ IA + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 -ILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 130 LVFEYINCGSLADRIRIQHNPQPQHEPLLLTHRLKIAKDIANAIAYLHVGFPRPVIFRDF 189
+V +Y G L RI Q Q + +L I A+ ++H R ++ RD
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQIL-----DWFVQICLALKHVH---DRKILHRDI 151
Query: 190 KLSNILFNEENVAKLFDFSFS 210
K NI ++ +L DF +
Sbjct: 152 KSQNIFLTKDGTVQLGDFGIA 172
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 179
Query: 229 RLNEDD--GYVALR 240
R D+ GYVA R
Sbjct: 180 RHTADEMTGYVATR 193
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 165 IAKDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 210
+ + + A+ +LH + +I RD K N+L E +L DF S
Sbjct: 122 VCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 179
Query: 229 RLNEDD--GYVALR 240
R D+ GYVA R
Sbjct: 180 RHTADEMTGYVATR 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 23/74 (31%)
Query: 169 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGELLTGLRAFDLA 228
I + Y+H +I RD K SN+ NE+ K+ DF LA
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG------------------LA 179
Query: 229 RLNEDD--GYVALR 240
R D+ GYVA R
Sbjct: 180 RHTADEMTGYVATR 193
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,713,594
Number of Sequences: 62578
Number of extensions: 353678
Number of successful extensions: 2004
Number of sequences better than 100.0: 645
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 529
Number of HSP's that attempted gapping in prelim test: 1649
Number of HSP's gapped (non-prelim): 748
length of query: 309
length of database: 14,973,337
effective HSP length: 99
effective length of query: 210
effective length of database: 8,778,115
effective search space: 1843404150
effective search space used: 1843404150
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)