BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045685
(199 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VO4|A Chain A, Glutathione Transferase From Glycine Max
pdb|2VO4|B Chain B, Glutathione Transferase From Glycine Max
pdb|3FHS|A Chain A, Glutathione Transferase From Glycine Max At 2.7 Resolution
pdb|3FHS|B Chain B, Glutathione Transferase From Glycine Max At 2.7 Resolution
Length = 219
Score = 206 bits (524), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 140/219 (63%), Gaps = 23/219 (10%)
Query: 3 KGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT---- 58
+ VVLLD W +PF +R +IALAEKG++YE + E+L KS LLL+ NP++KK+P
Sbjct: 2 QDEVVLLDFWPSPFGMRVRIALAEKGIKYEYKEEDL-RNKSPLLLQMNPVHKKIPVLIHN 60
Query: 59 -----------------W-PSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEV 100
W PLLPS Y A+TRFWAD++DKK++D I SKGE
Sbjct: 61 GKPICESLIAVQYIEEVWNDRNPLLPSDPYQRAQTRFWADYVDKKIYDLGRKIWTSKGEE 120
Query: 101 PETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECP 160
E AK EFIE LK LE LG+K +FGGD+ GFV + +P WF A E FG + +E+ECP
Sbjct: 121 KEAAKKEFIEALKLLEEQLGDKTYFGGDNLGFVDIALVPFYTWFKAYETFGTLNIESECP 180
Query: 161 KFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRNMFGIE 199
KF AW +C+Q+++VA+ LPD +KVYEF++ LR GIE
Sbjct: 181 KFIAWAKRCLQKESVAKSLPDQQKVYEFIMDLRKKLGIE 219
>pdb|1OYJ|A Chain A, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione.
pdb|1OYJ|B Chain B, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione.
pdb|1OYJ|C Chain C, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione.
pdb|1OYJ|D Chain D, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione
Length = 231
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 131/226 (57%), Gaps = 33/226 (14%)
Query: 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT------- 58
+VLLD W +PF R +IA+AEKG+E+E R E+L G KSDLLL+SNP+++K+P
Sbjct: 7 LVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDL-GNKSDLLLRSNPVHRKIPVLLHAGRP 65
Query: 59 --------------WP-SPPLLPSRAYGTAKTR-------FWADFIDKKVFDAVCNIRKS 96
+P +P LLP G A FWAD++D+K++D + +
Sbjct: 66 VSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRL 125
Query: 97 KGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGF---VHVIAIPLTCWFYAVEKFGGV 153
KGE A E EIL+ LE LG+++FFGG G V V +P T WFY+ E+ GG
Sbjct: 126 KGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGF 185
Query: 154 KVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRNMFGIE 199
VE P+ +AW +C + D+V + LP PEKVY+FV +L+ +G+E
Sbjct: 186 SVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231
>pdb|4J2F|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Ricinus Communis, Target Efi-501866
Length = 223
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 8 LLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------- 57
L W +PF R AL KG+ YE E+LF KS LLL+ NP++KK+P
Sbjct: 7 LHGAWPSPFSCRVIWALKLKGIPYEYVEEDLFN-KSPLLLQYNPVHKKIPVLVHGGKPIC 65
Query: 58 -----------TWPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKN 106
TWP PLLPS + A RFW FI+ K A+ NI ++KGE E A
Sbjct: 66 ESTIILEYLDETWPENPLLPSDPHERAVARFWVKFIEDK-GTAIWNIFRTKGEELEKAVK 124
Query: 107 EFIEILKQL-EGALGEKD--FFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKV--ENECPK 161
+E+LK + E A+G D +FGGD G V + + W +E+ GVKV + P+
Sbjct: 125 NCLEVLKTIEEHAMGVSDDKYFGGDKIGIVDIAFCGIAHWLGVIEEVAGVKVLESQKFPR 184
Query: 162 FSAWMNKCMQRDTVARILPDPEKVYEFVIMLRNMF 196
AW + + LPD +++ F R M
Sbjct: 185 LHAWTENFKEAPIIKENLPDRDQMTAFFKRRREMI 219
>pdb|1GWC|A Chain A, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|B Chain B, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|C Chain C, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
Length = 230
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 8 LLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPTW-------- 59
LL W +PF R K+ALA KG+ YE E+L+ KS+LLLKSNP++KK+P
Sbjct: 9 LLGAWPSPFVTRVKLALALKGLSYEDVEEDLY-KKSELLLKSNPVHKKIPVLIHNGAPVC 67
Query: 60 ---------------PSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPET- 103
P LLP+ Y A RFW ++D K+ + K E ++
Sbjct: 68 ESMIILQYIDEVFASTGPSLLPADPYERAIARFWVAYVDDKLVAPWRQWLRGKTEEEKSE 127
Query: 104 AKNEFIEILKQLEGALGE----KDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVEN-- 157
K + + LEGAL E FFGGD G V V + W E G K+ +
Sbjct: 128 GKKQAFAAVGVLEGALRECSKGGGFFGGDGVGLVDVALGGVLSWMKVTEALSGDKIFDAA 187
Query: 158 ECPKFSAWMNKCMQRDTVARILPDPEKVYEF 188
+ P +AW+ + ++ D LPD ++ EF
Sbjct: 188 KTPLLAAWVERFIELDAAKAALPDVGRLLEF 218
>pdb|3VLN|A Chain A, Human Glutathione Transferase O1-1 C32s Mutant In Complex
With Ascorbic Acid
Length = 241
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 73/201 (36%), Gaps = 29/201 (14%)
Query: 3 KGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT---- 58
+G++ + +PF R ++ L KG+ +E NL K + K NP VP
Sbjct: 21 EGSIRIYSMRFSPFAERTRLVLKAKGIRHEVININL-KNKPEWFFKKNPFG-LVPVLENS 78
Query: 59 ------------------WPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEV 100
+P LLP Y A + + K IR E
Sbjct: 79 QGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKED 138
Query: 101 PETAKNEFIEILKQLEGALGEK--DFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENE 158
K EF + +LE L K FFGG+S + + P WF +E + +
Sbjct: 139 YAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWP---WFERLEAMKLNECVDH 195
Query: 159 CPKFSAWMNKCMQRDTVARIL 179
PK WM + TV+ +L
Sbjct: 196 TPKLKLWMAAMKEDPTVSALL 216
>pdb|1YY7|A Chain A, Crystal Structure Of Stringent Starvation Protein A
(Sspa), An Rna Polymerase-Associated Transcription
Factor
pdb|1YY7|B Chain B, Crystal Structure Of Stringent Starvation Protein A
(Sspa), An Rna Polymerase-Associated Transcription
Factor
Length = 213
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 74/208 (35%), Gaps = 36/208 (17%)
Query: 3 KGAVVLLDCWANPFCLRAKIALAEKGVEYE---ARAENLFGGKSDLLLKSNPINKKVPT- 58
+ + L + F + +I LAEKGV E A+NL DL NP + VPT
Sbjct: 8 RSVMTLFSGPTDIFSHQVRIVLAEKGVSVEIEQVEADNLPQDLIDL----NPY-RTVPTL 62
Query: 59 --------------------WPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKG 98
+P PPL+P +R I+ + + I +
Sbjct: 63 VDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGSSRLMMHRIEHDWYSLLYKIEQGNA 122
Query: 99 EVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVE--KFGGVKVE 156
+ E A+ + E L + E FF + F V PL W V +F G
Sbjct: 123 QEAEAARKQLREELLSIAPVFNETPFFMSEEFSLVDCYLAPL-LWRLPVLGIEFTGAG-- 179
Query: 157 NECPKFSAWMNKCMQRDTVARILPDPEK 184
+ +M + +RD L + E+
Sbjct: 180 --SKELKGYMTRVFERDAFLASLTEAER 205
>pdb|1EEM|A Chain A, Glutathione Transferase From Homo Sapiens
Length = 241
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 72/201 (35%), Gaps = 29/201 (14%)
Query: 3 KGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT---- 58
+G++ + PF R ++ L KG+ +E NL K + K NP VP
Sbjct: 21 EGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININL-KNKPEWFFKKNPFG-LVPVLENS 78
Query: 59 ------------------WPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEV 100
+P LLP Y A + + K IR E
Sbjct: 79 QGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKED 138
Query: 101 PETAKNEFIEILKQLEGALGEK--DFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENE 158
K EF + +LE L K FFGG+S + + P WF +E + +
Sbjct: 139 YAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWP---WFERLEAMKLNECVDH 195
Query: 159 CPKFSAWMNKCMQRDTVARIL 179
PK WM + TV+ +L
Sbjct: 196 TPKLKLWMAAMKEDPTVSALL 216
>pdb|3LFL|A Chain A, Crystal Structure Of Human Glutathione Transferase Omega
1, Delta 155
pdb|3LFL|B Chain B, Crystal Structure Of Human Glutathione Transferase Omega
1, Delta 155
pdb|3LFL|C Chain C, Crystal Structure Of Human Glutathione Transferase Omega
1, Delta 155
Length = 240
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 72/200 (36%), Gaps = 28/200 (14%)
Query: 3 KGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT---- 58
+G++ + PF R ++ L KG+ +E NL K + K NP VP
Sbjct: 21 EGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININL-KNKPEWFFKKNPFG-LVPVLENS 78
Query: 59 ------------------WPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEV 100
+P LLP Y A + + K IR E
Sbjct: 79 QGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKED 138
Query: 101 PETAKNEFIEILKQLEGALGEK-DFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENEC 159
K EF + +LE +K FFGG+S + + P WF +E + +
Sbjct: 139 YAGLKEEFRKEFTKLEVLTNKKTTFFGGNSISMIDYLIWP---WFERLEAMKLNECVDHT 195
Query: 160 PKFSAWMNKCMQRDTVARIL 179
PK WM + TV+ +L
Sbjct: 196 PKLKLWMAAMKEDPTVSALL 215
>pdb|4HOJ|A Chain A, Crystal Structure Of Glutathione Transferase Homolog From
Neisseria Gonorrhoeae, Target Efi-501841, With Bound
Glutathione
Length = 210
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 25/191 (13%)
Query: 15 PFCLRAKIALAEKGVEYEARAENLFGGKSDL------------------LLKSNPINKKV 56
PF R + L EKG+++E + +++ DL L +SN IN+ +
Sbjct: 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYI 72
Query: 57 -PTWPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAK-NEFI-EILK 113
+P P L+P + R ++K++F+ V + E AK E I L
Sbjct: 73 DERFPHPQLMPGDPVMRGRGRLVLYRMEKELFNHVQVLENPAAANKEQAKAREAIGNGLT 132
Query: 114 QLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRD 173
L + + + G+ F + V PL + ++ + VK+ + + QR+
Sbjct: 133 MLSPSFSKSKYILGEDFSMIDVALAPL---LWRLDHY-DVKLGKSAAPLLKYAERIFQRE 188
Query: 174 TVARILPDPEK 184
L EK
Sbjct: 189 AFIEALTPAEK 199
>pdb|3LYP|A Chain A, Structure Of Stringent Starvation Protein A Homolog From
Pseudomonas Fluorescens
pdb|3LYP|B Chain B, Structure Of Stringent Starvation Protein A Homolog From
Pseudomonas Fluorescens
Length = 215
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 28/165 (16%)
Query: 2 SKGAVVLLDCWANP---FCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNP------- 51
S G L C+++P + R +I LAEKGV E + G + L++ NP
Sbjct: 2 SLGVTNRLACYSDPADHYSHRVRIVLAEKGVSAEIISVE-AGRQPPKLIEVNPYGSLPTL 60
Query: 52 INKKVPTW-------------PSPPLLPSRAYGTAKTRFWADFIDKK---VFDAVCNIRK 95
+++ + W P PPLLP A +R I + D + + R
Sbjct: 61 VDRDLALWESTVVXEYLDERYPHPPLLPVYPVARANSRLLIHRIQRDWCGQVDLILDPR- 119
Query: 96 SKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPL 140
+K A+ E E L + +K FF + V +P+
Sbjct: 120 TKEAARVQARKELRESLTGVSPLFADKPFFLSEEQSLVDCCLLPI 164
>pdb|4DEJ|A Chain A, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|B Chain B, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|C Chain C, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|D Chain D, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|E Chain E, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|F Chain F, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|G Chain G, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|H Chain H, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|I Chain I, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|J Chain J, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|K Chain K, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
pdb|4DEJ|L Chain L, Crystal Structure Of Glutathione Transferase-Like Protein
Il0419 (Target Efi-501089) From Idiomarina Loihiensis
L2tr
Length = 231
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 68/188 (36%), Gaps = 31/188 (16%)
Query: 19 RAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT-------------------- 58
+ ++ LAEKGV E DLL + NP + PT
Sbjct: 26 QVRLVLAEKGVGVEITYVTDESTPEDLL-QLNPYPEAKPTLVDRELVLYNAQIIMEYLDE 84
Query: 59 -WPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEG 117
+P PPL+P +R I++ + I+K+ + A+ E E + L
Sbjct: 85 RFPHPPLMPVYPVARGTSRLMMYRIERDWYSLAEKIQKNDAQ----ARQELKEGILSLAP 140
Query: 118 ALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPK-FSAWMNKCMQRDTVA 176
+ +F + F V PL A G+ +E + K +M + +R T
Sbjct: 141 IFADTPYFMSEEFSLVDCYLAPLLWRLPAY----GIDLEGQGAKEIKQYMVRLFERKTFQ 196
Query: 177 RILPDPEK 184
L + EK
Sbjct: 197 DSLTEEEK 204
>pdb|3LYK|A Chain A, Structure Of Stringent Starvation Protein A Homolog From
Haemophilus Influenzae
pdb|3LYK|B Chain B, Structure Of Stringent Starvation Protein A Homolog From
Haemophilus Influenzae
Length = 216
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 23/146 (15%)
Query: 16 FCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT----------------- 58
+C + KI LAEKGV YE +L D L + NP VPT
Sbjct: 17 YCHQVKIVLAEKGVLYENAEVDLQALPED-LXELNPYG-TVPTLVDRDLVLFNSRIIXEY 74
Query: 59 ----WPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQ 114
+P PPL AK R I++ + + + +A + E L
Sbjct: 75 LDERFPHPPLXQVYPVSRAKDRLLXLRIEQDWYPTLAKAENGTEKEKTSALKQLKEELLG 134
Query: 115 LEGALGEKDFFGGDSFGFVHVIAIPL 140
+ + +F + FG V PL
Sbjct: 135 IAPIFQQXPYFXNEEFGLVDCYVAPL 160
>pdb|3ERF|A Chain A, Crystal Structure Of Gtt2 From Saccharomyces Cerevisiae
pdb|3ERG|A Chain A, Crystal Structure Of Gtt2 From Saccharomyces Cerevisiae In
Complex With Glutathione Sulfnate
pdb|3ERG|B Chain B, Crystal Structure Of Gtt2 From Saccharomyces Cerevisiae In
Complex With Glutathione Sulfnate
pdb|3IBH|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Gtt2 In
Complex With Glutathione
Length = 233
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 105 KNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSA 164
+++ + + + L E+ + GDSF + I F A+ K +V EC A
Sbjct: 156 RDKALHGMHYFDTVLRERPYVAGDSFSMADITVIA-GLIFAAIVKL---QVPEECEALRA 211
Query: 165 WMNKCMQRDTVARIL 179
W + QR +V ++L
Sbjct: 212 WYKRMQQRPSVKKLL 226
>pdb|4IGJ|A Chain A, Crystal Structure Of Maleylacetoacetate Isomerase From
Anaeromyxobacter Dehalogenans 2cp-1, Target Efi-507175
pdb|4IGJ|B Chain B, Crystal Structure Of Maleylacetoacetate Isomerase From
Anaeromyxobacter Dehalogenans 2cp-1, Target Efi-507175
Length = 242
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 37/178 (20%)
Query: 8 LLDCWANPFCLRAKIALAEKGVEYEARAENLFG-------------------------GK 42
L W + R ++ LA KG+ YE RA +L G+
Sbjct: 27 LYSYWRSSSAWRVRLGLALKGLAYEYRAVDLLAQEQFQAAHQARNPMSQVPVLEVEEDGR 86
Query: 43 SDLLLKSNPINKKV-PTWPSPPLLPSRAYGTAKTRFWADFIDK--KVFDAVCNIRKSKGE 99
+ LL++S I + + P P LLP +G A+ R A+ ++ + +R + +
Sbjct: 87 THLLVQSMAILEWLEERHPEPALLPPDLWGRARVRALAEHVNSGTQPMQNALVLRMLREK 146
Query: 100 VP----ETAKNEFIEILKQLEGAL--GEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFG 151
VP E A+ L LE A+ G F GD+ +P Y +FG
Sbjct: 147 VPGWDREWARFFIARGLAALETAVRDGAGRFSHGDAPTLADCYLVPQ---LYNARRFG 201
>pdb|3QAG|A Chain A, Human Glutathione Transferase O2 With Glutathione -New
Crystal Form
pdb|3Q18|A Chain A, Human Glutathione Transferase O2
pdb|3Q18|B Chain B, Human Glutathione Transferase O2
pdb|3Q19|A Chain A, Human Glutathione Transferase O2
pdb|3Q19|B Chain B, Human Glutathione Transferase O2
Length = 239
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 68/190 (35%), Gaps = 26/190 (13%)
Query: 15 PFCLRAKIALAEKGVEYEARAENL------------FG-------GKSDLLLKSNPINKK 55
P+ R ++ L K + +E NL FG +S L+ +S +
Sbjct: 33 PYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQSQLIYESVIACEY 92
Query: 56 VP-TWPSPPLLPSRAYGTAKTRFWADFIDK-KVFDAVCNIRKSKGEVPETAKNEFIEILK 113
+ +P L P Y A+ + + K C + G K +
Sbjct: 93 LDDAYPGRKLFPYDPYERARQKMLLELFSKVPHLTKECLVALRSGRESTNLKAALRQEFS 152
Query: 114 QLEGALGEKD--FFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQ 171
LE L ++ FFGG S + + P WF ++ +G + + P W++
Sbjct: 153 NLEEILEYQNTTFFGGTSISMIDYLLWP---WFERLDVYGILDCVSHTPALRLWISAMKW 209
Query: 172 RDTVARILPD 181
TV+ +L D
Sbjct: 210 DPTVSALLMD 219
>pdb|1FW1|A Chain A, Glutathione Transferase ZetaMALEYLACETOACETATE ISOMERASE
Length = 216
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Query: 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLF--GGK--SDLLLKSNPINKKV 56
M G +L + + R +IALA KG++Y+ NL GG+ S NP+ K+V
Sbjct: 1 MQAGKPILYSYFRSSCSWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPM-KQV 59
Query: 57 PTW---------------------PSPPLLPSRAYGTAKTRFWADFI 82
PT P+P LLP A R +D I
Sbjct: 60 PTLKIDGITIHQSLAIIEYLEETRPTPRLLPQDPKKRASVRMISDLI 106
>pdb|3TOT|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000
pdb|3TOT|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000
pdb|3TOU|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000 With Gsh
Bound
pdb|3TOU|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000 With Gsh
Bound
Length = 226
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 34/159 (21%)
Query: 8 LLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPTW-------- 59
L+ A+P+ + ++ LAEK ++Y+ E+++ + + + NP+ KVP
Sbjct: 5 LIGSHASPYTRKVRVVLAEKKIDYQFVLEDVWNADTQ-IHQFNPLG-KVPCLVMDDGGAL 62
Query: 60 --------------PSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGE-VPETA 104
P L+P + R W D + DA +R + + PE
Sbjct: 63 FDSRVIAEYADTLSPVARLIPPSGRERVEVRCWEALAD-GLLDAAVALRVEQTQRTPEQR 121
Query: 105 KNEFI--------EILKQLEGALGEKDFFGGDSFGFVHV 135
+I E LK + L ++ + G+ +
Sbjct: 122 SESWITRQHHKIDEALKAMSRGLADRTWCNGNHLTLADI 160
>pdb|3M3M|A Chain A, Crystal Structure Of Glutathione S-Transferase From
Pseudomonas Fluorescens [pf-5]
Length = 210
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 36/186 (19%)
Query: 17 CLRAKIALAEKGVEYEARAENLFGG--KSDLLLKSNPINKKVPT---------WPSPPLL 65
C + K+ L G+ YE +A ++ GG +++ L NP N K+P W S +L
Sbjct: 15 CYKIKLXLNLLGLPYEWQAVDILGGDTQTEAFLAKNP-NGKIPVLELEDGTCLWESNAIL 73
Query: 66 PSRAYGT----AKTRFWADFIDKKVFD--------AVCNIRKSKGEVPETAKNEFIEILK 113
A G+ ++ R + + F+ AV + +PE + E++++ K
Sbjct: 74 NFLADGSQFLPSEPRLRTQVLQWQFFEQYSHEPYIAVARFIQLYEGLPEERREEYLKLHK 133
Query: 114 Q-------LEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWM 166
+ E L + G+ + + I L + + ++ GG + + P AW
Sbjct: 134 RGYKALDVXEKQLSRTPYLVGEHYS---IADIALYAYTHVADE-GGFDL-SRYPGIQAWX 188
Query: 167 NKCMQR 172
+
Sbjct: 189 QRVQSH 194
>pdb|1E6B|A Chain A, Crystal Structure Of A Zeta Class Glutathione
S-Transferase From Arabidopsis Thaliana
Length = 221
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 26/90 (28%)
Query: 8 LLDCWANPFCLRAKIALAEKGVEYEARAENLFGG---KSDLLLKSNPINKKVPT------ 58
L W + R +IALA KG++YE NL G SD K NP+ VP
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSD-FKKINPMG-TVPALVDGDV 68
Query: 59 ---------------WPSPPLLPSRAYGTA 73
+P PPLLP + A
Sbjct: 69 VINDSFAIIMYLDEKYPEPPLLPRDLHKRA 98
>pdb|3AGK|A Chain A, Crystal Structure Of Archaeal Translation Termination
Factor, Arf1
pdb|3VMF|B Chain B, Archaeal Protein
Length = 373
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 61 SPPLLPSRA-YGTAKTRFWADFIDKKVFD----AVCNIRKSKGEVPETAKNEFIEILKQL 115
SPP P R Y RF DF++ V D + + + + + K +E+LK+L
Sbjct: 112 SPPE-PIRVFYYRTDKRFITDFLEDMVEDNNAIGIIIVERDQATIG-LLKGARLEVLKEL 169
Query: 116 EGALGEKDFFGGDS 129
EG + K GG S
Sbjct: 170 EGFVPGKHKMGGQS 183
>pdb|3DL8|G Chain G, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
pdb|3DL8|H Chain H, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
Length = 429
Score = 26.6 bits (57), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 92 NIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFG 151
N+ K+ +P + + +K LE + FFG + +I I ++ WF FG
Sbjct: 339 NLHKAGAFIPGVRPGQ--DTVKYLERIINRLIFFGALFLSVIALIPILISVWFNIPFYFG 396
Query: 152 G 152
G
Sbjct: 397 G 397
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,157,180
Number of Sequences: 62578
Number of extensions: 254247
Number of successful extensions: 968
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 940
Number of HSP's gapped (non-prelim): 30
length of query: 199
length of database: 14,973,337
effective HSP length: 94
effective length of query: 105
effective length of database: 9,091,005
effective search space: 954555525
effective search space used: 954555525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)