Query 045685
Match_columns 199
No_of_seqs 137 out of 1151
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 04:28:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045685.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045685hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 2.4E-37 5.1E-42 226.5 20.8 194 4-198 8-228 (231)
2 PRK09481 sspA stringent starva 100.0 4.3E-33 9.3E-38 207.7 17.7 174 4-183 9-204 (211)
3 KOG0868 Glutathione S-transfer 100.0 1E-29 2.2E-34 176.1 12.8 176 1-182 1-208 (217)
4 PLN02473 glutathione S-transfe 100.0 6.7E-29 1.5E-33 185.5 15.1 172 6-180 3-210 (214)
5 PRK15113 glutathione S-transfe 100.0 2.1E-28 4.6E-33 182.8 16.2 173 1-182 1-209 (214)
6 TIGR00862 O-ClC intracellular 100.0 9.2E-28 2E-32 180.0 18.2 174 11-194 16-233 (236)
7 PRK10542 glutathionine S-trans 100.0 3.3E-28 7.2E-33 180.1 13.3 169 6-181 1-197 (201)
8 PRK13972 GSH-dependent disulfi 100.0 5.8E-28 1.3E-32 180.6 14.1 170 5-181 1-205 (215)
9 PRK10357 putative glutathione 100.0 1.8E-27 3.9E-32 176.3 16.3 172 6-182 1-201 (202)
10 TIGR01262 maiA maleylacetoacet 100.0 1.3E-27 2.7E-32 178.1 15.0 170 7-182 1-205 (210)
11 PLN02395 glutathione S-transfe 100.0 2.1E-27 4.6E-32 177.5 15.4 172 6-181 3-210 (215)
12 COG0625 Gst Glutathione S-tran 99.9 8.8E-27 1.9E-31 173.7 15.7 165 6-176 1-199 (211)
13 PLN02817 glutathione dehydroge 99.9 1.1E-25 2.4E-30 172.2 17.9 168 12-191 71-261 (265)
14 PRK11752 putative S-transferas 99.9 4.7E-26 1E-30 174.9 15.9 173 5-182 44-259 (264)
15 PLN02378 glutathione S-transfe 99.9 9.2E-26 2E-30 168.4 17.0 167 11-189 17-207 (213)
16 KOG0867 Glutathione S-transfer 99.9 3.9E-24 8.5E-29 160.5 14.9 174 5-181 2-209 (226)
17 PTZ00057 glutathione s-transfe 99.9 6.6E-24 1.4E-28 157.5 13.1 172 1-182 1-200 (205)
18 PRK10387 glutaredoxin 2; Provi 99.9 1.2E-23 2.6E-28 156.7 12.7 158 6-176 1-208 (210)
19 KOG1422 Intracellular Cl- chan 99.9 2.3E-21 4.9E-26 138.3 14.2 173 13-194 20-218 (221)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 1.3E-21 2.7E-26 145.7 12.4 156 7-176 1-207 (209)
21 KOG1695 Glutathione S-transfer 99.9 1.1E-20 2.4E-25 137.9 12.0 175 1-182 1-201 (206)
22 KOG4420 Uncharacterized conser 99.8 1E-19 2.2E-24 133.6 11.7 188 5-194 26-300 (325)
23 cd03185 GST_C_Tau GST_C family 99.8 8.2E-19 1.8E-23 120.3 11.7 122 70-191 2-125 (126)
24 cd03184 GST_C_Omega GST_C fami 99.8 4.8E-18 1E-22 116.3 10.8 119 71-191 2-123 (124)
25 cd03186 GST_C_SspA GST_N famil 99.8 7.8E-18 1.7E-22 112.3 10.1 105 70-178 2-106 (107)
26 cd03190 GST_C_ECM4_like GST_C 99.8 9.1E-18 2E-22 117.5 10.4 125 70-194 3-131 (142)
27 cd03196 GST_C_5 GST_C family, 99.7 6.7E-17 1.5E-21 109.1 10.6 111 67-179 2-115 (115)
28 cd03198 GST_C_CLIC GST_C famil 99.7 8.1E-17 1.8E-21 110.3 10.5 109 82-190 7-133 (134)
29 cd03201 GST_C_DHAR GST_C famil 99.7 2.1E-16 4.6E-21 107.5 10.1 107 83-190 11-119 (121)
30 cd03203 GST_C_Lambda GST_C fam 99.7 4E-16 8.7E-21 106.1 11.0 114 68-189 1-119 (120)
31 cd03188 GST_C_Beta GST_C famil 99.7 1.7E-16 3.6E-21 106.8 8.2 104 71-179 2-114 (114)
32 PLN02907 glutamate-tRNA ligase 99.7 8.1E-16 1.7E-20 131.5 13.9 135 6-174 3-159 (722)
33 cd03191 GST_C_Zeta GST_C famil 99.6 1.7E-15 3.7E-20 103.1 8.5 107 70-181 2-119 (121)
34 cd03182 GST_C_GTT2_like GST_C 99.6 3.9E-15 8.4E-20 100.7 9.9 104 68-175 1-117 (117)
35 cd03189 GST_C_GTT1_like GST_C 99.6 5.6E-15 1.2E-19 100.2 9.8 103 66-173 2-119 (119)
36 cd03178 GST_C_Ure2p_like GST_C 99.6 2.5E-15 5.3E-20 101.0 7.7 105 71-179 1-112 (113)
37 cd03187 GST_C_Phi GST_C family 99.6 4.5E-15 9.9E-20 100.4 8.6 106 71-179 2-118 (118)
38 cd03177 GST_C_Delta_Epsilon GS 99.6 1.2E-14 2.6E-19 98.6 9.8 105 71-179 2-110 (118)
39 cd03209 GST_C_Mu GST_C family, 99.6 1.3E-14 2.8E-19 98.8 9.3 108 71-183 2-111 (121)
40 cd03181 GST_C_EFB1gamma GST_C 99.6 1.5E-14 3.3E-19 98.6 8.6 111 71-183 1-118 (123)
41 cd03210 GST_C_Pi GST_C family, 99.6 1.4E-14 3E-19 99.3 8.3 109 70-183 2-114 (126)
42 cd03180 GST_C_2 GST_C family, 99.6 2.9E-14 6.3E-19 95.2 9.4 100 71-175 2-110 (110)
43 cd03207 GST_C_8 GST_C family, 99.6 8.5E-15 1.8E-19 96.8 6.5 99 77-181 3-102 (103)
44 KOG3029 Glutathione S-transfer 99.6 5.7E-14 1.2E-18 104.8 11.1 161 5-172 90-355 (370)
45 cd03183 GST_C_Theta GST_C fami 99.5 2.8E-14 6.2E-19 97.8 7.5 104 72-179 2-120 (126)
46 cd03208 GST_C_Alpha GST_C fami 99.5 6.1E-14 1.3E-18 97.5 9.2 107 70-181 2-115 (137)
47 COG0435 ECM4 Predicted glutath 99.5 2.7E-14 5.8E-19 106.3 7.3 83 98-180 200-285 (324)
48 KOG4244 Failed axon connection 99.5 1.9E-13 4.1E-18 101.4 11.5 156 4-171 44-272 (281)
49 KOG2903 Predicted glutathione 99.5 2.6E-14 5.6E-19 105.4 6.7 112 71-182 170-289 (319)
50 cd03195 GST_C_4 GST_C family, 99.5 2.4E-13 5.2E-18 91.6 9.3 104 69-180 1-112 (114)
51 PF00043 GST_C: Glutathione S- 99.5 1.3E-13 2.9E-18 89.6 7.5 70 100-173 25-95 (95)
52 cd03206 GST_C_7 GST_C family, 99.5 2.6E-13 5.7E-18 89.2 6.8 94 77-175 3-100 (100)
53 cd03179 GST_C_1 GST_C family, 99.4 2.9E-13 6.2E-18 89.6 6.2 95 71-170 2-105 (105)
54 PF13410 GST_C_2: Glutathione 99.4 2.9E-13 6.2E-18 82.9 5.5 67 100-168 3-69 (69)
55 cd03194 GST_C_3 GST_C family, 99.4 3.6E-12 7.9E-17 85.8 9.1 73 100-180 38-113 (114)
56 cd03204 GST_C_GDAP1 GST_C fami 99.4 1.8E-12 3.8E-17 86.3 7.2 73 99-175 25-111 (111)
57 cd03200 GST_C_JTV1 GST_C famil 99.4 2.8E-12 6E-17 83.6 7.9 87 63-171 9-95 (96)
58 cd00299 GST_C_family Glutathio 99.4 1.7E-12 3.8E-17 84.8 6.5 92 76-169 2-100 (100)
59 PF14497 GST_C_3: Glutathione 99.4 1.5E-12 3.3E-17 85.4 5.6 96 68-171 2-99 (99)
60 cd03060 GST_N_Omega_like GST_N 99.4 2E-12 4.4E-17 79.5 5.7 49 7-57 2-50 (71)
61 cd03059 GST_N_SspA GST_N famil 99.3 3.9E-12 8.5E-17 78.6 5.5 52 6-59 1-52 (73)
62 cd03052 GST_N_GDAP1 GST_N fami 99.3 4.3E-12 9.4E-17 78.4 5.6 51 6-57 1-53 (73)
63 COG2999 GrxB Glutaredoxin 2 [P 99.3 2.2E-11 4.8E-16 85.2 9.2 161 6-176 1-208 (215)
64 cd03192 GST_C_Sigma_like GST_C 99.3 1E-11 2.3E-16 82.1 7.3 95 71-169 2-104 (104)
65 cd03041 GST_N_2GST_N GST_N fam 99.3 4.9E-12 1.1E-16 79.1 4.9 52 5-57 1-52 (77)
66 cd03202 GST_C_etherase_LigE GS 99.3 1.8E-11 4E-16 83.6 8.0 69 100-171 55-123 (124)
67 cd03045 GST_N_Delta_Epsilon GS 99.3 9.1E-12 2E-16 77.2 5.4 52 6-58 1-54 (74)
68 PF13417 GST_N_3: Glutathione 99.3 9.5E-12 2.1E-16 77.4 5.2 48 8-57 1-48 (75)
69 cd03193 GST_C_Metaxin GST_C fa 99.3 2.5E-11 5.4E-16 77.8 7.3 66 103-170 19-88 (88)
70 cd03055 GST_N_Omega GST_N fami 99.3 1.8E-11 3.9E-16 78.7 6.4 53 4-58 17-69 (89)
71 cd03058 GST_N_Tau GST_N family 99.2 1.7E-11 3.7E-16 76.0 5.5 51 6-57 1-51 (74)
72 cd03061 GST_N_CLIC GST_N famil 99.2 1.3E-11 2.8E-16 78.9 5.0 44 12-57 20-63 (91)
73 cd03056 GST_N_4 GST_N family, 99.2 1.8E-11 3.9E-16 75.6 5.5 51 6-57 1-53 (73)
74 cd03051 GST_N_GTT2_like GST_N 99.2 1.9E-11 4.1E-16 75.6 5.4 52 6-58 1-54 (74)
75 cd03049 GST_N_3 GST_N family, 99.2 2.2E-11 4.7E-16 75.3 5.5 51 6-58 1-53 (73)
76 cd03053 GST_N_Phi GST_N family 99.2 4.1E-11 8.8E-16 74.6 6.1 51 6-57 2-54 (76)
77 cd03044 GST_N_EF1Bgamma GST_N 99.2 3.8E-11 8.2E-16 74.6 5.6 50 7-57 2-52 (75)
78 cd03037 GST_N_GRX2 GST_N famil 99.1 6.8E-11 1.5E-15 72.7 4.8 49 6-57 1-49 (71)
79 cd03047 GST_N_2 GST_N family, 99.1 1.2E-10 2.5E-15 72.0 5.5 53 6-59 1-55 (73)
80 cd03076 GST_N_Pi GST_N family, 99.1 5.9E-11 1.3E-15 73.4 4.1 51 6-58 2-52 (73)
81 cd03042 GST_N_Zeta GST_N famil 99.1 1.6E-10 3.4E-15 71.3 5.5 51 6-57 1-53 (73)
82 cd03050 GST_N_Theta GST_N fami 99.1 2E-10 4.2E-15 71.6 5.7 52 6-58 1-54 (76)
83 cd03048 GST_N_Ure2p_like GST_N 99.1 2.5E-10 5.4E-15 72.0 5.9 52 5-58 1-54 (81)
84 cd03197 GST_C_mPGES2 GST_C fam 99.1 1.3E-09 2.9E-14 75.6 9.1 66 102-171 78-145 (149)
85 cd03039 GST_N_Sigma_like GST_N 99.1 1.8E-10 3.9E-15 71.0 3.9 51 6-57 1-51 (72)
86 cd03040 GST_N_mPGES2 GST_N fam 99.1 2.5E-10 5.5E-15 71.2 4.5 49 5-57 1-49 (77)
87 PF14834 GST_C_4: Glutathione 99.0 3.5E-09 7.7E-14 69.3 9.3 104 68-179 1-112 (117)
88 cd03211 GST_C_Metaxin2 GST_C f 99.0 9E-10 2E-14 75.4 5.6 73 98-170 52-126 (126)
89 cd03057 GST_N_Beta GST_N famil 98.9 2.7E-09 5.8E-14 66.5 5.4 51 6-58 1-53 (77)
90 PF13409 GST_N_2: Glutathione 98.9 2.3E-09 5E-14 65.6 4.7 44 13-57 1-47 (70)
91 cd00570 GST_N_family Glutathio 98.9 3.6E-09 7.7E-14 64.1 5.5 50 6-57 1-51 (71)
92 cd03046 GST_N_GTT1_like GST_N 98.9 3.5E-09 7.5E-14 65.8 5.3 52 6-59 1-54 (76)
93 cd03205 GST_C_6 GST_C family, 98.9 2.2E-08 4.7E-13 65.4 8.1 67 98-169 32-98 (98)
94 KOG3027 Mitochondrial outer me 98.8 7.5E-08 1.6E-12 69.3 11.2 151 13-172 33-248 (257)
95 cd03212 GST_C_Metaxin1_3 GST_C 98.8 9.4E-09 2E-13 71.3 6.5 71 100-171 61-134 (137)
96 cd03043 GST_N_1 GST_N family, 98.8 1.1E-08 2.4E-13 63.1 5.4 46 11-57 7-53 (73)
97 PF02798 GST_N: Glutathione S- 98.8 1.5E-08 3.2E-13 63.0 5.6 52 6-57 1-54 (76)
98 PRK10638 glutaredoxin 3; Provi 98.8 1E-08 2.2E-13 64.9 5.0 54 1-57 1-54 (83)
99 cd03080 GST_N_Metaxin_like GST 98.8 1.2E-08 2.6E-13 63.3 5.2 44 5-57 1-51 (75)
100 cd03038 GST_N_etherase_LigE GS 98.7 4.1E-08 8.9E-13 62.2 4.4 44 12-57 14-59 (84)
101 cd03027 GRX_DEP Glutaredoxin ( 98.6 6.2E-08 1.3E-12 59.7 4.3 53 4-57 1-53 (73)
102 cd03075 GST_N_Mu GST_N family, 98.6 7.9E-08 1.7E-12 60.7 4.8 52 7-59 2-61 (82)
103 cd03077 GST_N_Alpha GST_N fami 98.6 8.7E-08 1.9E-12 60.0 4.9 50 5-59 1-55 (79)
104 cd03054 GST_N_Metaxin GST_N fa 98.6 9.3E-08 2E-12 58.7 4.7 43 6-57 1-50 (72)
105 TIGR02190 GlrX-dom Glutaredoxi 98.5 3.3E-07 7.2E-12 57.4 5.1 52 4-57 8-59 (79)
106 PRK10329 glutaredoxin-like pro 98.5 4E-07 8.7E-12 57.2 5.1 51 5-57 2-52 (81)
107 cd02976 NrdH NrdH-redoxin (Nrd 98.4 6.3E-07 1.4E-11 54.7 4.3 52 5-57 1-52 (73)
108 KOG3028 Translocase of outer m 98.3 2.9E-05 6.2E-10 59.7 13.2 149 13-171 16-233 (313)
109 cd03029 GRX_hybridPRX5 Glutare 98.3 1.9E-06 4.1E-11 52.9 5.5 51 5-57 2-52 (72)
110 TIGR02194 GlrX_NrdH Glutaredox 98.3 1.7E-06 3.7E-11 53.1 4.4 50 6-57 1-50 (72)
111 TIGR02196 GlrX_YruB Glutaredox 98.1 4E-06 8.7E-11 51.2 4.2 52 5-57 1-52 (74)
112 PF04399 Glutaredoxin2_C: Glut 98.1 2.5E-05 5.4E-10 53.4 8.2 68 101-175 57-124 (132)
113 cd02066 GRX_family Glutaredoxi 98.1 6E-06 1.3E-10 50.0 4.8 52 5-57 1-52 (72)
114 COG0695 GrxC Glutaredoxin and 98.1 1E-05 2.2E-10 50.6 5.4 51 5-57 2-55 (80)
115 TIGR02200 GlrX_actino Glutared 98.1 7.2E-06 1.6E-10 50.7 4.4 52 5-57 1-53 (77)
116 cd03418 GRX_GRXb_1_3_like Glut 98.1 7E-06 1.5E-10 50.6 4.2 53 5-57 1-53 (75)
117 PF00462 Glutaredoxin: Glutare 98.0 7.4E-06 1.6E-10 48.3 2.9 51 6-57 1-51 (60)
118 cd03199 GST_C_GRX2 GST_C famil 97.9 7.5E-05 1.6E-09 50.7 7.8 67 102-175 59-125 (128)
119 TIGR02189 GlrX-like_plant Glut 97.9 3.8E-05 8.2E-10 50.2 6.0 61 3-65 7-72 (99)
120 TIGR02181 GRX_bact Glutaredoxi 97.9 1.6E-05 3.5E-10 49.6 3.7 51 6-57 1-51 (79)
121 PHA03050 glutaredoxin; Provisi 97.8 7.6E-05 1.6E-09 49.5 5.8 53 4-57 13-71 (108)
122 TIGR00365 monothiol glutaredox 97.5 0.00015 3.3E-09 47.1 4.3 53 4-57 12-69 (97)
123 cd03419 GRX_GRXh_1_2_like Glut 97.5 0.00039 8.6E-09 43.4 5.6 51 5-57 1-55 (82)
124 cd03036 ArsC_like Arsenate Red 97.4 0.0002 4.2E-09 47.8 3.8 33 6-38 1-33 (111)
125 PRK01655 spxA transcriptional 97.4 0.00027 5.8E-09 48.6 4.4 33 5-37 1-33 (131)
126 cd03032 ArsC_Spx Arsenate Redu 97.3 0.00055 1.2E-08 46.0 5.1 33 5-37 1-33 (115)
127 cd02977 ArsC_family Arsenate R 97.3 0.00033 7E-09 46.2 4.0 33 6-38 1-33 (105)
128 cd03028 GRX_PICOT_like Glutare 97.3 0.00053 1.1E-08 43.9 4.3 53 4-57 8-65 (90)
129 PRK12559 transcriptional regul 97.2 0.001 2.2E-08 45.7 5.4 34 5-38 1-34 (131)
130 PRK13344 spxA transcriptional 97.2 0.0012 2.6E-08 45.4 5.4 34 5-38 1-34 (132)
131 cd03079 GST_N_Metaxin2 GST_N f 97.1 0.00077 1.7E-08 41.4 3.9 38 12-57 15-52 (74)
132 PRK11200 grxA glutaredoxin 1; 97.1 0.00098 2.1E-08 42.1 4.3 35 5-39 2-41 (85)
133 PRK12759 bifunctional gluaredo 97.1 0.0012 2.6E-08 54.1 5.8 35 5-39 3-37 (410)
134 TIGR02180 GRX_euk Glutaredoxin 97.1 0.0019 4.2E-08 40.3 5.4 50 6-57 1-56 (84)
135 TIGR01617 arsC_related transcr 97.1 0.00089 1.9E-08 45.1 4.0 32 6-37 1-32 (117)
136 cd03078 GST_N_Metaxin1_like GS 97.0 0.0015 3.3E-08 40.0 4.5 36 13-57 15-50 (73)
137 PRK10026 arsenate reductase; P 97.0 0.0016 3.4E-08 45.2 4.6 35 1-37 1-35 (141)
138 PRK10824 glutaredoxin-4; Provi 96.9 0.002 4.4E-08 43.1 4.4 63 4-67 15-83 (115)
139 cd03035 ArsC_Yffb Arsenate Red 96.9 0.0027 5.9E-08 41.8 4.9 32 6-37 1-32 (105)
140 cd03033 ArsC_15kD Arsenate Red 96.7 0.0041 8.8E-08 41.6 5.1 33 5-37 1-33 (113)
141 TIGR02183 GRXA Glutaredoxin, G 96.6 0.0042 9.1E-08 39.3 4.1 33 6-38 2-39 (86)
142 COG1393 ArsC Arsenate reductas 96.5 0.0085 1.9E-07 40.3 5.4 33 5-37 2-34 (117)
143 cd03031 GRX_GRX_like Glutaredo 96.4 0.0054 1.2E-07 42.9 4.3 35 5-39 1-41 (147)
144 PRK10853 putative reductase; P 96.4 0.0066 1.4E-07 40.9 4.2 32 5-36 1-32 (118)
145 TIGR01616 nitro_assoc nitrogen 96.1 0.019 4E-07 39.2 5.3 33 5-37 2-34 (126)
146 KOG1147 Glutamyl-tRNA syntheta 95.9 0.0051 1.1E-07 51.1 2.4 85 62-167 66-150 (712)
147 cd03034 ArsC_ArsC Arsenate Red 95.8 0.015 3.3E-07 38.7 3.9 31 6-36 1-31 (112)
148 TIGR00014 arsC arsenate reduct 95.7 0.017 3.6E-07 38.7 3.9 32 6-37 1-32 (114)
149 COG4545 Glutaredoxin-related p 95.6 0.019 4.1E-07 34.8 3.4 37 1-39 1-37 (85)
150 cd02973 TRX_GRX_like Thioredox 95.4 0.045 9.7E-07 32.5 4.6 32 5-36 2-38 (67)
151 PTZ00062 glutaredoxin; Provisi 95.2 0.038 8.3E-07 40.9 4.6 62 4-66 113-180 (204)
152 KOG1752 Glutaredoxin and relat 94.5 0.1 2.3E-06 34.2 4.7 62 4-67 14-80 (104)
153 PF11801 Tom37_C: Tom37 C-term 94.1 0.12 2.5E-06 37.2 4.6 38 108-145 113-154 (168)
154 cd01659 TRX_superfamily Thiore 92.9 0.25 5.4E-06 27.7 4.2 50 6-57 1-55 (69)
155 PF05768 DUF836: Glutaredoxin- 92.7 0.44 9.6E-06 29.6 5.2 49 5-57 1-51 (81)
156 PF03960 ArsC: ArsC family; I 91.6 0.25 5.3E-06 32.7 3.3 29 9-37 1-29 (110)
157 TIGR00411 redox_disulf_1 small 91.3 0.87 1.9E-05 27.8 5.4 50 5-57 2-55 (82)
158 PHA02125 thioredoxin-like prot 90.8 0.68 1.5E-05 28.2 4.4 47 6-57 2-48 (75)
159 cd03030 GRX_SH3BGR Glutaredoxi 89.4 0.92 2E-05 29.0 4.3 34 6-39 2-41 (92)
160 COG0278 Glutaredoxin-related p 88.6 1.7 3.7E-05 28.1 5.0 33 4-36 15-53 (105)
161 TIGR00412 redox_disulf_2 small 87.6 1.4 3E-05 26.9 4.1 31 6-37 3-37 (76)
162 KOG1668 Elongation factor 1 be 83.9 0.88 1.9E-05 34.1 2.2 59 109-176 10-68 (231)
163 cd03026 AhpF_NTD_C TRX-GRX-lik 82.5 2.1 4.6E-05 27.1 3.3 32 5-36 15-51 (89)
164 PF04908 SH3BGR: SH3-binding, 79.4 4 8.6E-05 26.5 3.8 34 6-39 3-42 (99)
165 PF10568 Tom37: Outer mitochon 78.7 5.6 0.00012 24.1 4.2 36 13-57 13-51 (72)
166 PHA03075 glutaredoxin-like pro 70.1 11 0.00024 25.2 4.1 36 4-39 3-38 (123)
167 COG5515 Uncharacterized conser 69.8 3.9 8.4E-05 23.8 1.7 22 5-26 2-27 (70)
168 PF01323 DSBA: DSBA-like thior 62.9 16 0.00035 26.2 4.4 35 5-39 1-40 (193)
169 cd03020 DsbA_DsbC_DsbG DsbA fa 61.8 17 0.00037 26.5 4.4 34 5-38 80-115 (197)
170 cd02975 PfPDO_like_N Pyrococcu 56.6 30 0.00065 22.7 4.5 49 6-57 25-77 (113)
171 PF13192 Thioredoxin_3: Thiore 56.5 22 0.00048 21.4 3.6 31 5-36 2-36 (76)
172 COG3019 Predicted metal-bindin 56.0 25 0.00054 24.4 3.9 34 4-37 26-59 (149)
173 TIGR01295 PedC_BrcD bacterioci 53.7 32 0.00069 23.1 4.3 32 6-37 27-62 (122)
174 cd03021 DsbA_GSTK DsbA family, 53.2 26 0.00057 25.8 4.1 35 5-39 2-40 (209)
175 PF13098 Thioredoxin_2: Thiore 52.9 17 0.00037 23.4 2.8 34 6-39 9-49 (112)
176 cd02972 DsbA_family DsbA famil 51.5 21 0.00046 21.8 3.0 22 6-27 1-22 (98)
177 PRK11657 dsbG disulfide isomer 49.8 29 0.00063 26.6 4.0 20 6-25 121-140 (251)
178 PRK10877 protein disulfide iso 49.7 30 0.00066 26.2 4.0 22 5-26 110-131 (232)
179 cd02947 TRX_family TRX family; 48.9 56 0.0012 19.4 5.3 22 5-26 13-34 (93)
180 cd02953 DsbDgamma DsbD gamma f 48.1 63 0.0014 20.5 4.9 33 6-39 15-55 (104)
181 PRK15317 alkyl hydroperoxide r 47.0 14 0.0003 31.5 2.0 50 5-57 119-171 (517)
182 KOG0911 Glutaredoxin-related p 46.5 23 0.0005 26.6 2.8 34 4-37 139-177 (227)
183 cd04911 ACT_AKiii-YclM-BS_1 AC 45.5 26 0.00056 21.5 2.5 26 13-38 14-39 (76)
184 TIGR03140 AhpF alkyl hydropero 45.4 14 0.00031 31.5 1.9 50 5-57 120-172 (515)
185 TIGR03143 AhpF_homolog putativ 40.9 55 0.0012 28.3 4.7 48 5-57 479-531 (555)
186 cd02949 TRX_NTR TRX domain, no 39.7 67 0.0014 20.1 4.0 49 6-57 17-69 (97)
187 PRK15371 effector protein YopJ 39.5 1.3E+02 0.0028 23.8 6.0 66 102-170 22-87 (287)
188 PF09849 DUF2076: Uncharacteri 38.9 1.4E+02 0.003 23.0 6.1 49 66-119 23-71 (247)
189 TIGR02187 GlrX_arch Glutaredox 38.4 78 0.0017 23.4 4.7 50 5-57 136-188 (215)
190 cd03024 DsbA_FrnE DsbA family, 36.9 48 0.001 23.9 3.3 34 6-39 1-42 (201)
191 cd03022 DsbA_HCCA_Iso DsbA fam 34.7 54 0.0012 23.4 3.3 33 6-38 1-37 (192)
192 PF00085 Thioredoxin: Thioredo 31.9 1.3E+02 0.0027 18.5 6.0 50 5-57 20-73 (103)
193 cd03019 DsbA_DsbA DsbA family, 30.9 63 0.0014 22.7 3.1 21 5-25 18-38 (178)
194 cd03025 DsbA_FrnE_like DsbA fa 30.7 1E+02 0.0022 22.0 4.2 34 5-38 2-41 (193)
195 PF00731 AIRC: AIR carboxylase 30.4 87 0.0019 22.1 3.5 27 13-39 12-38 (150)
196 PF13462 Thioredoxin_4: Thiore 29.6 65 0.0014 22.1 2.9 21 5-25 15-35 (162)
197 cd02989 Phd_like_TxnDC9 Phosdu 29.4 1.5E+02 0.0032 19.4 4.5 49 6-57 26-77 (113)
198 cd02951 SoxW SoxW family; SoxW 29.0 53 0.0012 21.7 2.3 18 5-22 17-34 (125)
199 cd03023 DsbA_Com1_like DsbA fa 28.8 61 0.0013 21.9 2.7 21 5-25 8-28 (154)
200 COG4105 ComL DNA uptake lipopr 28.5 1.3E+02 0.0029 23.2 4.5 44 9-57 62-108 (254)
201 cd02963 TRX_DnaJ TRX domain, D 27.6 1.8E+02 0.0038 18.8 5.1 49 6-57 28-81 (111)
202 cd06891 PX_Vps17p The phosphoi 26.7 44 0.00094 23.3 1.5 19 159-177 111-129 (140)
203 PF10990 DUF2809: Protein of u 26.0 43 0.00094 21.3 1.3 17 123-139 71-87 (91)
204 COG3433 Aryl carrier domain [S 25.2 1.1E+02 0.0025 18.6 2.9 40 131-172 28-69 (74)
205 cd02984 TRX_PICOT TRX domain, 25.2 1.7E+02 0.0037 17.9 5.4 49 6-57 18-70 (97)
206 TIGR01162 purE phosphoribosyla 25.1 1.4E+02 0.0031 21.1 3.9 26 14-39 11-36 (156)
207 PF09413 DUF2007: Domain of un 24.9 91 0.002 18.0 2.5 32 7-38 2-33 (67)
208 PF11823 DUF3343: Protein of u 24.8 1.6E+02 0.0035 17.5 3.7 31 8-38 5-35 (73)
209 KOG3425 Uncharacterized conser 24.6 1.7E+02 0.0036 19.9 3.8 40 12-52 43-86 (128)
210 PF11732 Thoc2: Transcription- 22.5 1.8E+02 0.0039 17.9 3.5 42 123-170 35-76 (77)
211 cd02961 PDI_a_family Protein D 22.2 1.2E+02 0.0025 18.4 2.9 35 5-39 18-58 (101)
212 cd02995 PDI_a_PDI_a'_C PDIa fa 22.0 1.2E+02 0.0025 18.8 2.9 35 5-39 21-61 (104)
213 PF15608 PELOTA_1: PELOTA RNA 21.9 2.1E+02 0.0045 18.7 3.8 30 6-35 58-87 (100)
214 cd02959 ERp19 Endoplasmic reti 21.1 2.6E+02 0.0055 18.4 5.7 21 6-26 23-43 (117)
215 PRK13947 shikimate kinase; Pro 20.6 1.7E+02 0.0036 20.4 3.7 29 1-31 1-29 (171)
216 cd02993 PDI_a_APS_reductase PD 20.5 1.3E+02 0.0029 19.2 2.9 35 5-39 24-63 (109)
217 PF13728 TraF: F plasmid trans 20.4 1.9E+02 0.0041 21.6 4.0 32 6-37 124-159 (215)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-37 Score=226.55 Aligned_cols=194 Identities=47% Similarity=0.799 Sum_probs=173.0
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCC-C
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWP-S 61 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~-~ 61 (199)
+.++||+++.|||++|++++|++|||+|+.++.|+. ++++|+++.||.++||| .|| +
T Consensus 8 ~~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~-~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 8 GTVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT-NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred CeEEEEEeecChHHHHHHHHHHhcCCceEEEecCCC-CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 569999999999999999999999999999999999 99999999998779999 788 4
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhchhhHHHHhcc-CCcchhHHHHHHHHHHHHHHhhhC-CCCccccCCCChhHHHHHh
Q 045685 62 PPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKS-KGEVPETAKNEFIEILKQLEGALG-EKDFFGGDSFGFVHVIAIP 139 (199)
Q Consensus 62 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~ 139 (199)
++++|+|+.+|+.++.|+.+++..++.....+... +++..+...+++.+.|..+|+.|+ +++|++|+++|++|++++|
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p 166 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGP 166 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHh
Confidence 89999999999999999999999887777766663 457788899999999999999998 7899999999999999998
Q ss_pred HHHHHHHhHh-hcCcc--ccccCccHHHHHHHHhcchhhhccCCCchHHHHHHHHHHhhhcC
Q 045685 140 LTCWFYAVEK-FGGVK--VENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRNMFGI 198 (199)
Q Consensus 140 ~l~~~~~~~~-~~~~~--~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (199)
++.++..+.. ..+.+ ...++|.|.+|.+||.++|.|++++++.+...++++.+++..++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~~ 228 (231)
T KOG0406|consen 167 SFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSPN 228 (231)
T ss_pred hHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhccc
Confidence 7776655543 33222 26899999999999999999999999999999999999998653
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=4.3e-33 Score=207.72 Aligned_cols=174 Identities=23% Similarity=0.422 Sum_probs=147.1
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCCCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWPSP 62 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~~~ 62 (199)
++|+||+++.||+|+||+++|+++||+|+.+.+++. +++++|+++||. |+|| ++++.
T Consensus 9 ~~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~-~~~~~~~~~nP~-g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~ 86 (211)
T PRK09481 9 SVMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD-NLPQDLIDLNPY-QSVPTLVDRELTLYESRIIMEYLDERFPHP 86 (211)
T ss_pred CeeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc-cCCHHHHHhCCC-CCCCEEEECCEEeeCHHHHHHHHHHhCCCC
Confidence 579999999999999999999999999999999998 889999999999 9999 66777
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHH
Q 045685 63 PLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTC 142 (199)
Q Consensus 63 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~ 142 (199)
.++|.++.+|+.++.|..++...+......+...++...+...+.+.+.+..+|+.|++++|++|+++|+||+++++.+.
T Consensus 87 ~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~ 166 (211)
T PRK09481 87 PLMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLW 166 (211)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHH
Confidence 89999999999999999887765554444333333344566777889999999999998999999999999999999987
Q ss_pred HHHHhHhhcCccc-cccCccHHHHHHHHhcchhhhccCCCch
Q 045685 143 WFYAVEKFGGVKV-ENECPKFSAWMNKCMQRDTVARILPDPE 183 (199)
Q Consensus 143 ~~~~~~~~~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 183 (199)
++... +.++ ...+|+|++|+++|.++|++++++.+.+
T Consensus 167 ~~~~~----~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~ 204 (211)
T PRK09481 167 RLPVL----GIELSGPGAKELKGYMTRVFERDSFLASLTEAE 204 (211)
T ss_pred HHHhc----CCCCCCCCChhHHHHHHHHhccHHHHHHcCHHH
Confidence 66542 3344 2579999999999999999999987644
No 3
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1e-29 Score=176.12 Aligned_cols=176 Identities=24% Similarity=0.333 Sum_probs=149.6
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC---CCChhhhhhCCCCCCCC--------------------
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG---GKSDLLLKSNPINKKVP-------------------- 57 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~---~~~~~~~~~~p~~g~vP-------------------- 57 (199)
|.+.+.+||+|+.|.+++|||++|..|||+|+.+++++.+ +...+|.++||. ++||
T Consensus 1 ~~~~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm-~kVP~L~i~g~tl~eS~AII~YLe 79 (217)
T KOG0868|consen 1 SSAAKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPM-EKVPTLVIDGLTLTESLAIIEYLE 79 (217)
T ss_pred CCcccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCch-hhCCeEEECCEEeehHHHHHHHHH
Confidence 3446899999999999999999999999999999999874 456789999999 9999
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHHHHhhhhchhhHHH----HhccC--CcchhHHHHHHHHHHHHHHhhhC--CCCccccC
Q 045685 58 -TWPSPPLLPSRAYGTAKTRFWADFIDKKVFDAVCN----IRKSK--GEVPETAKNEFIEILKQLEGALG--EKDFFGGD 128 (199)
Q Consensus 58 -~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~ 128 (199)
.+|+++|+|.|+..|+.++++...+...+.|.-.- .+..+ +.....+...+.+.+..+|+.|. .++|.+||
T Consensus 80 Et~P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGD 159 (217)
T KOG0868|consen 80 ETYPDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGD 159 (217)
T ss_pred hcCCCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCc
Confidence 78999999999999999999999999988775442 22222 22245667778999999999994 47999999
Q ss_pred CCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 129 SFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 129 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
++|+||+++.|.++....+ ..++ ..||.|.+..+.+.+.|.|+.+.++.
T Consensus 160 evtiADl~L~pqv~nA~rf----~vdl-~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 160 EVTIADLCLPPQVYNANRF----HVDL-TPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred eeehhhhccchhhhhhhhc----cccC-CcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 9999999999999755443 4666 89999999999999999999998764
No 4
>PLN02473 glutathione S-transferase
Probab=99.96 E-value=6.7e-29 Score=185.52 Aligned_cols=172 Identities=19% Similarity=0.280 Sum_probs=137.7
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC---------------------CCCC-
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP---------------------TWPS- 61 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP---------------------~~~~- 61 (199)
|+||+++.||+|+||+++|.++||+|+.+.++... +++++++++||. |+|| .+++
T Consensus 3 ~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~ 81 (214)
T PLN02473 3 VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF-GQVPAIEDGDLKLFESRAIARYYATKYADQ 81 (214)
T ss_pred eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC-CCCCeEEECCEEEEehHHHHHHHHHHcCCc
Confidence 89999999999999999999999999999998763 578899999999 9999 4543
Q ss_pred -CCCCCCCHHHHHHHHHHHHHhhhhchhhHH-----HHhcc---C---CcchhHHHHHHHHHHHHHHhhhCCCCccccCC
Q 045685 62 -PPLLPSRAYGTAKTRFWADFIDKKVFDAVC-----NIRKS---K---GEVPETAKNEFIEILKQLEGALGEKDFFGGDS 129 (199)
Q Consensus 62 -~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~---~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~ 129 (199)
.+++|.++.+++.+++|..++.+.+.+... ..+.. . ....+....++.+.++.+|+.|++++|++|++
T Consensus 82 ~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~ 161 (214)
T PLN02473 82 GTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDE 161 (214)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcccCCC
Confidence 268999999999999999988776654322 12211 1 12234456778889999999998889999999
Q ss_pred CChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCC
Q 045685 130 FGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILP 180 (199)
Q Consensus 130 ~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 180 (199)
+|+||+++++.+.++..... ...+.+++|+|.+|+++|.++|++++++.
T Consensus 162 ~t~ADi~~~~~~~~~~~~~~--~~~~~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 162 FTLADLTHMPGMRYIMNETS--LSGLVTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred CCHHHHHHHHHHHHHHhccc--cHHHHhcCHHHHHHHHHHhcChhhHHHHH
Confidence 99999999999876543211 11224789999999999999999999864
No 5
>PRK15113 glutathione S-transferase; Provisional
Probab=99.96 E-value=2.1e-28 Score=182.81 Aligned_cols=173 Identities=19% Similarity=0.248 Sum_probs=138.9
Q ss_pred CCCCcEEEEccC--CChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC-------------------
Q 045685 1 MSKGAVVLLDCW--ANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP------------------- 57 (199)
Q Consensus 1 M~~~~~~Ly~~~--~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP------------------- 57 (199)
|+-++|+||+++ .||+|+||+++|.++||+|+.+.+++.+ ++.++|+++||. |+||
T Consensus 1 ~~~~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~-g~VP~L~~~~~~l~ES~aI~~YL 79 (214)
T PRK15113 1 MSKPAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT-RRVPTLQHDDFELSESSAIAEYL 79 (214)
T ss_pred CCCCeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC-CCCCEEEECCEEEecHHHHHHHH
Confidence 555789999975 7999999999999999999999999862 467899999999 9999
Q ss_pred --CCCCCC---CCCCCHHHHHHHHHHHHHhhhhchhhHHH-----Hhcc--CCcchhHHHHHHHHHHHHHHhhhCC-CCc
Q 045685 58 --TWPSPP---LLPSRAYGTAKTRFWADFIDKKVFDAVCN-----IRKS--KGEVPETAKNEFIEILKQLEGALGE-KDF 124 (199)
Q Consensus 58 --~~~~~~---l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~l~~le~~L~~-~~~ 124 (199)
.++++. ++|.++.+++.+++|+.+++..+.+.... .+.. .....+...+.+.+.++.+|+.|++ ++|
T Consensus 80 ~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 159 (214)
T PRK15113 80 EERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPN 159 (214)
T ss_pred HHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 556554 99999999999999999987666543221 1111 1233466778899999999999974 579
Q ss_pred cccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 125 FGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 125 l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
++|+ +|+||+++++.+.++... +..+ .|+|.+|++||.++|+|++++.+.
T Consensus 160 l~G~-~TlADi~l~~~l~~~~~~----~~~~---~p~l~~~~~r~~~rp~~~~~~~~~ 209 (214)
T PRK15113 160 LFGE-WCIADTDLALMLNRLVLH----GDEV---PERLADYATFQWQRASVQRWLALS 209 (214)
T ss_pred eeCC-ccHHHHHHHHHHHHHHHc----CCCC---CHHHHHHHHHHhcCHHHHHHHHHh
Confidence 9996 999999999999766532 2333 299999999999999999987653
No 6
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.96 E-value=9.2e-28 Score=180.02 Aligned_cols=174 Identities=19% Similarity=0.281 Sum_probs=137.7
Q ss_pred cCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCCC---CCCCC
Q 045685 11 CWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWPS---PPLLP 66 (199)
Q Consensus 11 ~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~~---~~l~p 66 (199)
...||+|+||+++|.++||+|+.+.+|+. +++++|+++||. |+|| .|+. +.+.|
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~-~~~~~fl~inP~-g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p 93 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLK-RKPEDLQNLAPG-THPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSP 93 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCC-CCCHHHHHHCcC-CCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCC
Confidence 35799999999999999999999999999 889999999999 9999 4443 34556
Q ss_pred CCHHHHHHHHHHHHHhhhhchhhHHHHhccC-CcchhHHHHHHHHHHHHHHhhhC------------------CCCcccc
Q 045685 67 SRAYGTAKTRFWADFIDKKVFDAVCNIRKSK-GEVPETAKNEFIEILKQLEGALG------------------EKDFFGG 127 (199)
Q Consensus 67 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~------------------~~~~l~G 127 (199)
.++..++... .+++.+..++... +...+...+.+.+.+..||+.|+ +++|+.|
T Consensus 94 ~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~G 165 (236)
T TIGR00862 94 KHPESNTAGL--------DIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDG 165 (236)
T ss_pred CCHHHHHHHH--------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccC
Confidence 6655444221 1233333333222 22344556668899999999996 5799999
Q ss_pred CCCChhHHHHHhHHHHHHHh-HhhcCccccccCccHHHHHHHHhcchhhhccCCCchHHHHHHHHHHh
Q 045685 128 DSFGFVHVIAIPLTCWFYAV-EKFGGVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRN 194 (199)
Q Consensus 128 ~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (199)
+++|+|||+++|.+.++..+ +...+++++.++|+|.+|++++.++|+|++++++++.++..+.+..+
T Consensus 166 d~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~~ 233 (236)
T TIGR00862 166 DELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVAK 233 (236)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHhh
Confidence 99999999999999988875 34456776799999999999999999999999999999999888743
No 7
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.96 E-value=3.3e-28 Score=180.05 Aligned_cols=169 Identities=21% Similarity=0.376 Sum_probs=136.8
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC---CCChhhhhhCCCCCCCC----------------------CCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG---GKSDLLLKSNPINKKVP----------------------TWP 60 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~---~~~~~~~~~~p~~g~vP----------------------~~~ 60 (199)
|+||+.+.| ++++++++|+++||+|+.+.+++.+ ..+++|+++||. |+|| .++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~-g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPK-GQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcC-CCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 689998755 7999999999999999999998852 345889999999 9999 455
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHhhhhchhhHHHHhccC--CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHH
Q 045685 61 SPPLL-PSRAYGTAKTRFWADFIDKKVFDAVCNIRKSK--GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIA 137 (199)
Q Consensus 61 ~~~l~-p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l 137 (199)
++.++ |.++.+|+.++.|+.++...+.+.+...+... +...+...+.+.+.|..+|+.|++++|++|+++|+||+++
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l 158 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYL 158 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHH
Confidence 55555 66788999999999988777776655444332 2223445677899999999999988999999999999999
Q ss_pred HhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCC
Q 045685 138 IPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 138 ~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
++++.++... +.++ ..+|+|.+|++++.++|++++++..
T Consensus 159 ~~~~~~~~~~----~~~~-~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 159 FTVLRWAYAV----KLNL-EGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHhhcc----CCCc-ccchHHHHHHHHHHcCHHHHHHHHH
Confidence 9998776442 3343 6899999999999999999998754
No 8
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.96 E-value=5.8e-28 Score=180.58 Aligned_cols=170 Identities=15% Similarity=0.167 Sum_probs=132.8
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC--CC----CC---------------
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP--TW----PS--------------- 61 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP--~~----~~--------------- 61 (199)
+|+||+.+ +|+|+||+++|+++||+|+.+.+++.+ +++++|+++||. |+|| .. .+
T Consensus 1 m~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~-gkVP~L~~~~~~d~g~~~~L~ES~AI~~Y 78 (215)
T PRK13972 1 MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN-NKIPAIVDHSPADGGEPLSLFESGAILLY 78 (215)
T ss_pred CeEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcC-CCCCEEEeCCCCCCCCceeEEcHHHHHHH
Confidence 47999876 899999999999999999999998762 457899999999 9999 21 00
Q ss_pred -----CCCCCCCHHHHHHHHHHHHHhhhhchhhHHHH--hc-c----CCcchhHHHHHHHHHHHHHHhhhCCCCccccCC
Q 045685 62 -----PPLLPSRAYGTAKTRFWADFIDKKVFDAVCNI--RK-S----KGEVPETAKNEFIEILKQLEGALGEKDFFGGDS 129 (199)
Q Consensus 62 -----~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~-~----~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~ 129 (199)
+.+.|.++.+|+.++.|+.+....+.+.+... +. . .+...+.....+.+.+..+|++|++++|++|++
T Consensus 79 L~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~ 158 (215)
T PRK13972 79 LAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGEN 158 (215)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCC
Confidence 13457788999999999999887776654321 11 1 122344556678899999999998889999999
Q ss_pred CChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCC
Q 045685 130 FGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 130 ~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
+|+|||++++++...... +.++ ++||+|.+|+++|.++|++++++..
T Consensus 159 ~t~ADi~l~~~~~~~~~~----~~~~-~~~P~l~~w~~r~~~rp~~~~~~~~ 205 (215)
T PRK13972 159 YSIADIACWPWVNAWTRQ----RIDL-AMYPAVKNWHERIRSRPATGQALLK 205 (215)
T ss_pred CCHHHHHHHHHHHHHhhc----CCcc-hhCHHHHHHHHHHHhCHHHHHHHHH
Confidence 999999998877433221 2343 7899999999999999999988654
No 9
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.96 E-value=1.8e-27 Score=176.28 Aligned_cols=172 Identities=20% Similarity=0.304 Sum_probs=136.5
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC----------------------CCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP----------------------TWPSPP 63 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP----------------------~~~~~~ 63 (199)
|+||+++.||++++||++|+++||+|+.+.++.. ..++++.++||. |+|| .++++.
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~-~~~~~~~~~nP~-g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~ 78 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPY-NADNGVAQYNPL-GKVPALVTEEGECWFDSPIIAEYIELLNVAPA 78 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCC-CCchhhhhcCCc-cCCCeEEeCCCCeeecHHHHHHHHHHhCCCCC
Confidence 5899999999999999999999999999999876 667788889999 9999 445556
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhchhhHHHHh---ccC----CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHH
Q 045685 64 LLPSRAYGTAKTRFWADFIDKKVFDAVCNIR---KSK----GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVI 136 (199)
Q Consensus 64 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~ 136 (199)
++|.++.+++.+++|..+.++.+......+. ... +...+...+.+.+.|..||++|++++ ++|+++|+||++
T Consensus 79 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~ 157 (202)
T PRK10357 79 MLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIA 157 (202)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHH
Confidence 8999999999999998877665443322111 111 12234566789999999999998778 999999999999
Q ss_pred HHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 137 AIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 137 l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
+++.+.++.... .+..+..++|+|.+|++++.++|+|+++.++.
T Consensus 158 l~~~l~~~~~~~--~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~~ 201 (202)
T PRK10357 158 IACAVGYLNFRR--VAPGWCVDRPHLVKLVENLFQRESFARTEPPK 201 (202)
T ss_pred HHHHHHHHHhcc--cCcchhhcChHHHHHHHHHhcChhhhhcCCCC
Confidence 999998765421 11222367999999999999999999998764
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.96 E-value=1.3e-27 Score=178.13 Aligned_cols=170 Identities=26% Similarity=0.354 Sum_probs=135.5
Q ss_pred EEEccCCChhhHHHHHHHHHcCCceeEEEecCC--C-CCChhhhhhCCCCCCCC---------------------CCCCC
Q 045685 7 VLLDCWANPFCLRAKIALAEKGVEYEARAENLF--G-GKSDLLLKSNPINKKVP---------------------TWPSP 62 (199)
Q Consensus 7 ~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~--~-~~~~~~~~~~p~~g~vP---------------------~~~~~ 62 (199)
+||+++.||+|+|||++|+++||+|+.+.++.. + .++++++++||. |+|| .+++.
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ-GLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC-CcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 589999999999999999999999999998862 1 457889999999 9999 55656
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhchhhHH----HHhcc----CCc-chhHHHHHHHHHHHHHHhhhCC--CCccccCCCC
Q 045685 63 PLLPSRAYGTAKTRFWADFIDKKVFDAVC----NIRKS----KGE-VPETAKNEFIEILKQLEGALGE--KDFFGGDSFG 131 (199)
Q Consensus 63 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~----~~~-~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t 131 (199)
.++|.++.+++.+++|..++...+.+... .++.. ++. ..+...+.+.+.|+.||++|++ ++|++|+++|
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T 159 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPT 159 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCC
Confidence 79999999999999999988765543211 12211 111 2233456688999999999975 4699999999
Q ss_pred hhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 132 FVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 132 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
+|||++++++.++... ...+ ..||+|++|+++|.++|++++++.+.
T Consensus 160 ~ADi~~~~~l~~~~~~----~~~~-~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 160 LADLCLVPQVYNAERF----GVDL-TPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHHHHc----CCCc-ccchHHHHHHHHHhcCHHHHHhCccc
Confidence 9999999999876532 2334 78999999999999999999998754
No 11
>PLN02395 glutathione S-transferase
Probab=99.95 E-value=2.1e-27 Score=177.55 Aligned_cols=172 Identities=21% Similarity=0.336 Sum_probs=134.9
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC---------------------CCCC-
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP---------------------TWPS- 61 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP---------------------~~~~- 61 (199)
++||+.+. ++++|++++|.++|++|+.+.+++.. +++++|+++||. |+|| ++++
T Consensus 3 ~~ly~~~~-~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~ 80 (215)
T PLN02395 3 LKVYGPAF-ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF-GVVPVIVDGDYKIFESRAIMRYYAEKYRSQ 80 (215)
T ss_pred EEEEcCCc-CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHHHcCCC
Confidence 89999644 57999999999999999999998752 567899999999 9999 4543
Q ss_pred -CCCCCCCHHHHHHHHHHHHHhhhhchhhHHHH-----hc------cCCcchhHHHHHHHHHHHHHHhhhCCCCccccCC
Q 045685 62 -PPLLPSRAYGTAKTRFWADFIDKKVFDAVCNI-----RK------SKGEVPETAKNEFIEILKQLEGALGEKDFFGGDS 129 (199)
Q Consensus 62 -~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~ 129 (199)
++++|.++.+++.+++|..+.+..+.+.+... +. ..+...+...+.+.+.++.+|+.|++++|++|++
T Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~ 160 (215)
T PLN02395 81 GPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDF 160 (215)
T ss_pred CcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 36999999999999999998877665443221 11 1112234567778899999999998889999999
Q ss_pred CChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCC
Q 045685 130 FGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 130 ~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
+|+||+++++++.++... ........++|+|.+|++++.++|++++++..
T Consensus 161 ~s~ADi~l~~~~~~~~~~--~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 161 VSLADLAHLPFTEYLVGP--IGKAYLIKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred cCHHHHHHHHHHHHHhcc--cchhhhhccCchHHHHHHHHHcChHHHHHHHH
Confidence 999999999988765321 11111246799999999999999999998754
No 12
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=8.8e-27 Score=173.75 Aligned_cols=165 Identities=27% Similarity=0.503 Sum_probs=139.5
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC-CCChhhhhhCCCCCCCC----------------------CCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG-GKSDLLLKSNPINKKVP----------------------TWPSP 62 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~-~~~~~~~~~~p~~g~vP----------------------~~~~~ 62 (199)
|+||+++.||+|+||+++|.++|++|+.+.++... .++++|+++||. |+|| ++|++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~-gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPL-GKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCC-CCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 68999999999999999999999999999999872 488999999999 9999 55554
Q ss_pred CCCCCCHH---HHHHHHHHHHHhhhhchhhHHHHhcc--------CCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCC
Q 045685 63 PLLPSRAY---GTAKTRFWADFIDKKVFDAVCNIRKS--------KGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFG 131 (199)
Q Consensus 63 ~l~p~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 131 (199)
.++|.++. +|+.+..|..++...+.+.+...... .....+...+.+.+.+..+|..|++++|++|+++|
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 159 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFT 159 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCC
Confidence 59998875 78888899999888787777654332 23345667888999999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhh
Q 045685 132 FVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVA 176 (199)
Q Consensus 132 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 176 (199)
+||+++++++.++... +..+ .++|+|.+|++|+.++|+++
T Consensus 160 iAD~~~~~~~~~~~~~----~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 160 IADIALAPLLWRLALL----GEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhhhc----Cccc-ccChHHHHHHHHHHcCCchh
Confidence 9999999999875543 3333 78999999999999999965
No 13
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.94 E-value=1.1e-25 Score=172.16 Aligned_cols=168 Identities=20% Similarity=0.305 Sum_probs=130.1
Q ss_pred CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCCCCCCCCCCHH
Q 045685 12 WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWPSPPLLPSRAY 70 (199)
Q Consensus 12 ~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~~~~l~p~~~~ 70 (199)
..||+|+|++++|+++||+|+.+.+++. +++++|+++||. |+|| +++++.+ .++.
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~-~~~~~fl~iNP~-GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L--~~~~ 146 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLT-NKPEWFLKISPE-GKVPVVKLDEKWVADSDVITQALEEKYPDPPL--ATPP 146 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcC-cCCHHHHhhCCC-CCCCEEEECCEEEecHHHHHHHHHHHCCCCCC--CCHH
Confidence 4699999999999999999999999998 899999999999 9999 5565555 3567
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhC-CCCccccCCCChhHHHHHhHHHHHHHhHh
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALG-EKDFFGGDSFGFVHVIAIPLTCWFYAVEK 149 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 149 (199)
+++.++.++. +.+..++.... ..+...+.+.+.+..||+.|+ +++|++|+++|+|||++++.+.++.....
T Consensus 147 era~i~~~l~-------~~~~~~~~~~~-~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~ 218 (265)
T PLN02817 147 EKASVGSKIF-------STFIGFLKSKD-PGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALG 218 (265)
T ss_pred HHHHHHHHHH-------HHHHHHhccCC-cchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7777665432 22222322221 122334677888999999997 47999999999999999999987765321
Q ss_pred -hcCccccccCccHHHHHHHHhcchhhhccCCCchHHHHHHHH
Q 045685 150 -FGGVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIM 191 (199)
Q Consensus 150 -~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (199)
..+.++.+++|+|.+|+++|.++|+|+++++..+.+.+.++.
T Consensus 219 ~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~~~~ 261 (265)
T PLN02817 219 HYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALPEDVIAGWRP 261 (265)
T ss_pred HhcCCCccccCHHHHHHHHHHhcchhHhhcCCCHHHHHHHhHh
Confidence 223344578999999999999999999999988777776654
No 14
>PRK11752 putative S-transferase; Provisional
Probab=99.94 E-value=4.7e-26 Score=174.88 Aligned_cols=173 Identities=17% Similarity=0.206 Sum_probs=132.9
Q ss_pred cEEEEccCCChhhHHHHHHHHHc------CCceeEEEecCCC--CCChhhhhhCCCCCCCC-------------------
Q 045685 5 AVVLLDCWANPFCLRAKIALAEK------GVEYEARAENLFG--GKSDLLLKSNPINKKVP------------------- 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~------gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP------------------- 57 (199)
.|+||+. .||+|+||+++|+++ |++|+.+.+++.. +.+++|+++||. |+||
T Consensus 44 ~~~Ly~~-~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~-GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSL-GTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN-SKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecC-CCCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC-CCCCEEEeCCCCCCeEEEcHHHH
Confidence 5999997 599999999999997 8999999998752 567899999999 9999
Q ss_pred ------CCCCCCCCCCCHHHHHHHHHHHHHhhhhchh---hHHHHhc--cC--CcchhHHHHHHHHHHHHHHhhhCCCCc
Q 045685 58 ------TWPSPPLLPSRAYGTAKTRFWADFIDKKVFD---AVCNIRK--SK--GEVPETAKNEFIEILKQLEGALGEKDF 124 (199)
Q Consensus 58 ------~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~--~~--~~~~~~~~~~~~~~l~~le~~L~~~~~ 124 (199)
.+ ++|+|.++.+|+.++.|+.+....... .+...+. +. ....+....++.+.|+.+|+.|++++|
T Consensus 122 l~YL~~~~--~~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~f 199 (264)
T PRK11752 122 LLYLAEKF--GAFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEY 199 (264)
T ss_pred HHHHHHhc--CCcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 22 248899999999999999887654311 1111111 11 112344566788999999999988899
Q ss_pred cccCCCChhHHHHHhHHHHHHHhHhhc---CccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 125 FGGDSFGFVHVIAIPLTCWFYAVEKFG---GVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 125 l~G~~~t~aD~~l~~~l~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
|+|+++|+|||++++++.++....... ..+ .++||+|.+|+++|.++|++++++...
T Consensus 200 l~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~-~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 200 IAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLD-VGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred CCCCccCHHHHHHHHHHHHHhhccccccccccC-cccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 999999999999999887664321000 112 378999999999999999999987654
No 15
>PLN02378 glutathione S-transferase DHAR1
Probab=99.94 E-value=9.2e-26 Score=168.38 Aligned_cols=167 Identities=23% Similarity=0.336 Sum_probs=125.9
Q ss_pred cCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCCCCCCCCCCH
Q 045685 11 CWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWPSPPLLPSRA 69 (199)
Q Consensus 11 ~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~~~~l~p~~~ 69 (199)
+..||||+||+++|+++|++|+.+.+++. .++++|+++||. |+|| ++++..+ .++
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~-~~~~~~l~inP~-G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~~~ 92 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLS-DKPQWFLDISPQ-GKVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--KTP 92 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcc-cCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHhCCCCCC--CCH
Confidence 45799999999999999999999999998 899999999999 9999 4554434 355
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhC--CCCccccCCCChhHHHHHhHHHHHHHh
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALG--EKDFFGGDSFGFVHVIAIPLTCWFYAV 147 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~~~l~~~~~~ 147 (199)
.+++.+... +...+..++... ...+...+.+.+.|+.+|+.|+ +++|++|+++|+||+++++++.++...
T Consensus 93 ~~~a~i~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~ 164 (213)
T PLN02378 93 AEFASVGSN-------IFGTFGTFLKSK-DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVA 164 (213)
T ss_pred HHHHHHHHH-------HHHHHHHHHhcC-ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHH
Confidence 666654432 222233232222 1233455678889999999997 479999999999999999999876543
Q ss_pred Hh-hcCccccccCccHHHHHHHHhcchhhhccCCCchHHHHHH
Q 045685 148 EK-FGGVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFV 189 (199)
Q Consensus 148 ~~-~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 189 (199)
.. ....++..++|+|.+|+++|.++|+++++++.....+...
T Consensus 165 ~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~~~ 207 (213)
T PLN02378 165 LGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVISGW 207 (213)
T ss_pred HHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHHHHHH
Confidence 21 2223334789999999999999999999998876655433
No 16
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=3.9e-24 Score=160.49 Aligned_cols=174 Identities=21% Similarity=0.261 Sum_probs=146.0
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC---------------------CCC-
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP---------------------TWP- 60 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP---------------------~~~- 60 (199)
.|+||+++.||.|+++.+++.++|++|+.+.++..+ +++++|+++||. |+|| .|.
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~-~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~ 80 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPL-GKVPALEDGGLTLWESHAILRYLAEKYGP 80 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcC-CCCCeEecCCeEEeeHHHHHHHHHHHcCC
Confidence 489999999999999999999999999999888764 899999999999 8999 343
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHhhhhchhhH--HHHhcc-------CCcchhHHHHHHHHHHHHHHhhhCCCCccccCCC
Q 045685 61 SPP-LLPSRAYGTAKTRFWADFIDKKVFDAV--CNIRKS-------KGEVPETAKNEFIEILKQLEGALGEKDFFGGDSF 130 (199)
Q Consensus 61 ~~~-l~p~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~ 130 (199)
... ++|.+..+|+.+.+|+.+..+.+.+.. ..++.+ +.....+....+.+.++.+|..|.++.|+.|+++
T Consensus 81 ~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~ 160 (226)
T KOG0867|consen 81 LGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQL 160 (226)
T ss_pred CCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcc
Confidence 344 899999999999999999888887763 232222 3456678899999999999999999999999999
Q ss_pred ChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCC
Q 045685 131 GFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 131 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
|+||+.+.+.+..+.. ... ......++|++.+|++++.++|++++....
T Consensus 161 tlADl~~~~~~~~~~~-~~~-~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~ 209 (226)
T KOG0867|consen 161 TLADLSLASTLSQFQG-KFA-TEKDFEKYPKVARWYERIQKRPAYEEANEK 209 (226)
T ss_pred cHHHHHHhhHHHHHhH-hhh-hhhhhhhChHHHHHHHHHHhCccHHHHHHH
Confidence 9999999999987742 111 122358999999999999999998887654
No 17
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.91 E-value=6.6e-24 Score=157.55 Aligned_cols=172 Identities=13% Similarity=0.107 Sum_probs=119.1
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhh--------hhCCCCCCCC---------------
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLL--------KSNPINKKVP--------------- 57 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~--------~~~p~~g~vP--------------- 57 (199)
|+ ++++||+++.++++++||++|+++||+|+.+.++. .++ .+. ++||. |+||
T Consensus 1 m~-~~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~--~~~-~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~eS~AI 75 (205)
T PTZ00057 1 MA-EEIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE--NGD-AFIEFKNFKKEKDTPF-EQVPILEMDNIIFAQSQAI 75 (205)
T ss_pred CC-CceEEEecCCCcchHHHHHHHHHcCCCeEEEeccc--cch-HHHHHHhccccCCCCC-CCCCEEEECCEEEecHHHH
Confidence 66 67999999999999999999999999999987743 222 332 47999 9999
Q ss_pred -CCCC--CCCCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCC--CCccccCCCCh
Q 045685 58 -TWPS--PPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGE--KDFFGGDSFGF 132 (199)
Q Consensus 58 -~~~~--~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~ 132 (199)
.|-. .++.+.+..+++.+..+...+.+........... .+...+...+.+.+.+..||+.|++ ++|++|+++|+
T Consensus 76 ~~YLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~ 154 (205)
T PTZ00057 76 VRYLSKKYKICGESELNEFYADMIFCGVQDIHYKFNNTNLF-KQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTY 154 (205)
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccH
Confidence 1111 1234555555555544433322211111110000 1112234567788999999999964 38999999999
Q ss_pred hHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 133 VHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 133 aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
||+++++.+.++... .+.++ +.||+|.+|++|+.++|++++++.++
T Consensus 155 AD~~l~~~~~~~~~~---~~~~l-~~~P~l~~~~~r~~~~P~~k~y~~~~ 200 (205)
T PTZ00057 155 ADLAVFNLYDDIETK---YPNSL-KNFPLLKAHNEFISNLPNIKNYISNR 200 (205)
T ss_pred HHHHHHHHHHHHHHh---Chhhh-ccChhHHHHHHHHHhChHHHHHHHhC
Confidence 999999988766531 12344 78999999999999999999998664
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.91 E-value=1.2e-23 Score=156.70 Aligned_cols=158 Identities=14% Similarity=0.117 Sum_probs=116.4
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC----------------------CCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP----------------------TWPSPP 63 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP----------------------~~~~~~ 63 (199)
|+||++..||+|+|||++|+++||+|+.+.++.. ... ...+.||. |+|| +|+++.
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~-~~~-~~~~~~p~-~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~ 77 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLAND-DEA-TPIRMIGQ-KQVPILQKDDGSYMPESLDIVHYIDELDGKPL 77 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCC-chh-hHHHhcCC-cccceEEecCCeEecCHHHHHHHHHHhCCCcc
Confidence 6899999999999999999999999999988654 322 22578998 8999 555433
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccC----------------------C------cchhHHHHHHHHHHHHH
Q 045685 64 LLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSK----------------------G------EVPETAKNEFIEILKQL 115 (199)
Q Consensus 64 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----------------------~------~~~~~~~~~~~~~l~~l 115 (199)
+.+ .+++.++.|+.++...+.+.+...+... + ...++..+.+.+.|+.+
T Consensus 78 l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (210)
T PRK10387 78 LTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRAL 154 (210)
T ss_pred CCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 321 2567788887776554443332211100 0 01135677889999999
Q ss_pred HhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhh
Q 045685 116 EGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVA 176 (199)
Q Consensus 116 e~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 176 (199)
|+.|++ +|++|+++|+||+++++++.++... .+. +.+|+|.+|++||.++|++.
T Consensus 155 e~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~~---~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 155 DPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KGI---EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cCC---CCCHHHHHHHHHHHHHhCCC
Confidence 999986 9999999999999999999877653 122 24699999999999999864
No 19
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.88 E-value=2.3e-21 Score=138.29 Aligned_cols=173 Identities=18% Similarity=0.320 Sum_probs=139.0
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCCCCCCCCCCHHH
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWPSPPLLPSRAYG 71 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~~~~l~p~~~~~ 71 (199)
.||||||+.+.|.++|++|++..||+. .+++||+++.|. |++| .+|.+.+.--++.|
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vttVd~~-~kp~~f~~~sp~-~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E 97 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVTTVDLS-RKPEWFLDISPG-GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPE 97 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEEEeecC-CCcHHHHhhCCC-CCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHH
Confidence 599999999999999999999999999 999999999999 8999 33333221111112
Q ss_pred HHHHHHHHHHhhhhchhhHHHHh-ccCCcchhHHHHHHHHHHHHHHhhhCC---CCccccCCCChhHHHHHhHHHHHHHh
Q 045685 72 TAKTRFWADFIDKKVFDAVCNIR-KSKGEVPETAKNEFIEILKQLEGALGE---KDFFGGDSFGFVHVIAIPLTCWFYAV 147 (199)
Q Consensus 72 ~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~~~ 147 (199)
- .-+...++..+..++ .++++.-+.....+...|..|++.|+. ++|+.||++|.|||.++|-|+.+..+
T Consensus 98 ~-------asag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va 170 (221)
T KOG1422|consen 98 S-------ASAGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVA 170 (221)
T ss_pred H-------HhhHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHH
Confidence 1 122334556666664 344556666777888889999999974 79999999999999999999999887
Q ss_pred H-hhcCccccccCccHHHHHHHHhcchhhhccCCCchHHHHHHHHHHh
Q 045685 148 E-KFGGVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRN 194 (199)
Q Consensus 148 ~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (199)
. +..+++++.++++|.+|++.+.++..|..+++.+++++..+..+..
T Consensus 171 ~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~~~ 218 (221)
T KOG1422|consen 171 AKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAPVAK 218 (221)
T ss_pred HHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhhhh
Confidence 5 4456778999999999999999999999999999999988887654
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.87 E-value=1.3e-21 Score=145.66 Aligned_cols=156 Identities=16% Similarity=0.195 Sum_probs=109.2
Q ss_pred EEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC----------------------CCCCCCC
Q 045685 7 VLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP----------------------TWPSPPL 64 (199)
Q Consensus 7 ~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP----------------------~~~~~~l 64 (199)
+||++..||+|+|||++|.++|++|+.+.++.. . .....+.||. |+|| +|+.+.+
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~-~-~~~~~~~np~-g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~ 77 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLND-D-EETPIRMIGA-KQVPILQKDDGRAMPESLDIVAYFDKLDGEPLL 77 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCC-c-chhHHHhcCC-CCcceEEeeCCeEeccHHHHHHHHHHhCCCccC
Confidence 689999999999999999999999999877543 2 2234789999 8999 4443323
Q ss_pred CCCCHHHHHHHHHHHHHhhhhchhhHHHHhc-----------------cCC-----------cchhHHHHHHHHHHHHHH
Q 045685 65 LPSRAYGTAKTRFWADFIDKKVFDAVCNIRK-----------------SKG-----------EVPETAKNEFIEILKQLE 116 (199)
Q Consensus 65 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----------------~~~-----------~~~~~~~~~~~~~l~~le 116 (199)
.|. .++.++.|+.++...+...+...+. ... ...++..+.+.+.|+.+|
T Consensus 78 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le 154 (209)
T TIGR02182 78 TGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELD 154 (209)
T ss_pred CCC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHH
Confidence 222 3455666665544433222211110 000 011456678899999999
Q ss_pred hhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCc-cHHHHHHHHhcchhhh
Q 045685 117 GALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECP-KFSAWMNKCMQRDTVA 176 (199)
Q Consensus 117 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~~ 176 (199)
+.|++++|++| ++|+||+++++.+.++.... + ..+| +|.+|++||.+++++.
T Consensus 155 ~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~---~----~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 155 KLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA---G----INWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHhCccccCC-CCCHHHHHHHHHhcCeeeec---C----CCCChHHHHHHHHHHHHhCCC
Confidence 99999999965 59999999999998766421 1 1356 9999999999988763
No 21
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=1.1e-20 Score=137.95 Aligned_cols=175 Identities=14% Similarity=0.128 Sum_probs=136.3
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC----------------CCCC--C
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP----------------TWPS--P 62 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP----------------~~~~--~ 62 (199)
|+ .++|++++..+++..+|++++..|++|+...++.. +.....+...|. |+|| +|-. .
T Consensus 1 m~--~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~-~~w~~~K~~~pf-gqlP~l~vDg~~i~QS~AI~RyLArk~ 76 (206)
T KOG1695|consen 1 MP--PYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITME-DAWEELKDKMPF-GQLPVLEVDGKKLVQSRAILRYLARKF 76 (206)
T ss_pred CC--ceEEEecCcchhHHHHHHHHHhcCCCcceeeeccc-cchhhhcccCCC-CCCCEEeECCEeeccHHHHHHHHHHHh
Confidence 55 79999999999999999999999999999999886 544444556898 9999 2222 4
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccC--Cc---chh-HHHHHHHHHHHHHHhhhC--CCCccccCCCChhH
Q 045685 63 PLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSK--GE---VPE-TAKNEFIEILKQLEGALG--EKDFFGGDSFGFVH 134 (199)
Q Consensus 63 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~-~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD 134 (199)
++.++++.++++++++++.+.+.....+...+... +. ..+ .......+.+..+++.|+ ++.|++||++|+||
T Consensus 77 gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aD 156 (206)
T KOG1695|consen 77 GLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWAD 156 (206)
T ss_pred CcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHH
Confidence 68899999999999999998886655444333321 11 111 344566778889999996 45799999999999
Q ss_pred HHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCc
Q 045685 135 VIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDP 182 (199)
Q Consensus 135 ~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 182 (199)
+.++..+..+... ......+.+|+|+++.+++.++|.+++++.++
T Consensus 157 l~i~e~l~~l~~~---~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r 201 (206)
T KOG1695|consen 157 LVIAEHLDTLEEL---LDPSALDHFPKLKAFKERVSSIPNIKKYLESR 201 (206)
T ss_pred HHHHHHHHHHHHh---cCchhhccChHHHHHHHHHhcCchHHHHHhcC
Confidence 9999988766552 23333578899999999999999999998764
No 22
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.83 E-value=1e-19 Score=133.65 Aligned_cols=188 Identities=18% Similarity=0.223 Sum_probs=127.0
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC---------------------CCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP---------------------TWPS 61 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP---------------------~~~~ 61 (199)
.++||..+.|--+||||+++.+|||+|+...|++.. +.++||...||. |+|| .|-+
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~-gevPVl~~g~~II~d~tqIIdYvErtf~g 104 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPG-GEVPVLIHGDNIISDYTQIIDYVERTFTG 104 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCC-CCCceEecCCeecccHHHHHHHHHHhhcc
Confidence 499999999999999999999999999999998864 889999999999 9999 1211
Q ss_pred -CCCCCCC-H--HHHH---HHHHHHHHhhh--------------hchhhHHHH-----------h---------------
Q 045685 62 -PPLLPSR-A--YGTA---KTRFWADFIDK--------------KVFDAVCNI-----------R--------------- 94 (199)
Q Consensus 62 -~~l~p~~-~--~~~a---~~~~~~~~~~~--------------~~~~~~~~~-----------~--------------- 94 (199)
..|+|.- . ..+. ....+..-++. ...|....+ +
T Consensus 105 er~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ 184 (325)
T KOG4420|consen 105 ERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYL 184 (325)
T ss_pred cccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHH
Confidence 2344421 0 0111 01111100000 001111100 0
Q ss_pred -----------cc-CCcchhHHHHHHHHHHHHHHhhhCC----CCccccCCCChhHHHHHhHHHHHHHhHhhcCccc-cc
Q 045685 95 -----------KS-KGEVPETAKNEFIEILKQLEGALGE----KDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKV-EN 157 (199)
Q Consensus 95 -----------~~-~~~~~~~~~~~~~~~l~~le~~L~~----~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~-~~ 157 (199)
.. +........+++..+|+++|..|.+ ..|++|+++|+||+.+.+.|+++..+.- ....+ ..
T Consensus 185 akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~-e~~yw~~g 263 (325)
T KOG4420|consen 185 AKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGL-EKKYWEDG 263 (325)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHccc-HHHhcccC
Confidence 00 0122345566777888899999965 5899999999999999999999987631 11112 35
Q ss_pred cCccHHHHHHHHhcchhhhccCCCchHHHHHHHHHHh
Q 045685 158 ECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRN 194 (199)
Q Consensus 158 ~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (199)
..|+|..|+.|+..|++|++++++.-.+.-+...++.
T Consensus 264 srpnle~Yf~rvrrR~sf~kvlg~~fnilr~~~~~~k 300 (325)
T KOG4420|consen 264 SRPNLESYFERVRRRFSFRKVLGDIFNILRFRLVKRK 300 (325)
T ss_pred CCccHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHhc
Confidence 7899999999999999999999886665554444443
No 23
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.80 E-value=8.2e-19 Score=120.34 Aligned_cols=122 Identities=43% Similarity=0.772 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHh
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEK 149 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 149 (199)
.+|+.+++|+.+++..+.+.+...+...+...+.....+.+.++.||+.|++++|++|+++|+|||++++.+.++..+..
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~ 81 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEE 81 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 47899999999999888888776655544556677888999999999999889999999999999999999988766543
Q ss_pred hcCccc--cccCccHHHHHHHHhcchhhhccCCCchHHHHHHHH
Q 045685 150 FGGVKV--ENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIM 191 (199)
Q Consensus 150 ~~~~~~--~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (199)
..+.++ .+.+|++.+|+++|.++|++++++++.+...+++++
T Consensus 82 ~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 82 VGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 333331 377999999999999999999999998887776654
No 24
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.77 E-value=4.8e-18 Score=116.28 Aligned_cols=119 Identities=26% Similarity=0.363 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCC--CCccccCCCChhHHHHHhHHHHHHHhH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGE--KDFFGGDSFGFVHVIAIPLTCWFYAVE 148 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~l~~~l~~~~~~~ 148 (199)
+||+.+.|+++++. +.+.+...+.. ++..+...+.+.+.|+.+|+.|++ ++|++|+++|+||+++++++.++..+.
T Consensus 2 ~ra~~r~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~ 79 (124)
T cd03184 2 EKAQQKLLLERFSK-VVSAFYKLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALK 79 (124)
T ss_pred hHHHHHHHHHHHhh-hhHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHH
Confidence 58999999999974 55555555555 667788899999999999999975 799999999999999999998877654
Q ss_pred hhcCcc-ccccCccHHHHHHHHhcchhhhccCCCchHHHHHHHH
Q 045685 149 KFGGVK-VENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIM 191 (199)
Q Consensus 149 ~~~~~~-~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (199)
...+.. ..+++|+|++|+++|.++|++++++++.+.+.++++.
T Consensus 80 ~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 80 LLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred hhccccCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 221111 1478999999999999999999999999999888764
No 25
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.76 E-value=7.8e-18 Score=112.26 Aligned_cols=105 Identities=22% Similarity=0.381 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHh
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEK 149 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 149 (199)
.+|++++.|+.+++..+.+.+..+..+.++..+.....+.+.|..+|+.|++++|++|+++|+|||++++.+.++..
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~--- 78 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPA--- 78 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHH---
Confidence 57999999999999988888776655445556678888999999999999999999999999999999999865542
Q ss_pred hcCccccccCccHHHHHHHHhcchhhhcc
Q 045685 150 FGGVKVENECPKFSAWMNKCMQRDTVARI 178 (199)
Q Consensus 150 ~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 178 (199)
.+.++...+|+|.+|+++|.++|+++++
T Consensus 79 -~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 79 -LGIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred -cCCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 2344445799999999999999999875
No 26
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.76 E-value=9.1e-18 Score=117.50 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhc-cCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhH
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRK-SKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVE 148 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 148 (199)
..|+.+++|++|+...+.+.+..... .+++..+.....+.+.|+.+|+.|++++|++|+++|+||+++++++.++..+.
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~ 82 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVY 82 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHh
Confidence 45788999999999998887776543 33455667888899999999999998999999999999999999987764321
Q ss_pred -hhc--CccccccCccHHHHHHHHhcchhhhccCCCchHHHHHHHHHHh
Q 045685 149 -KFG--GVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVIMLRN 194 (199)
Q Consensus 149 -~~~--~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (199)
... +......||+|.+|+++|.++|++++++...+...++++++++
T Consensus 83 ~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 83 VQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred hhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 111 1112368999999999999999999999998989999998865
No 27
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.72 E-value=6.7e-17 Score=109.08 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHhhhhchhhHHHHhccC---CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHH
Q 045685 67 SRAYGTAKTRFWADFIDKKVFDAVCNIRKSK---GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCW 143 (199)
Q Consensus 67 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 143 (199)
.|+.+++.+++|..+.+..+.+.+....... ....+.....+.+.+..+|++|++++|++|+++|+||+++++.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~ 81 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQ 81 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHH
Confidence 4788999999999999999988887644321 2246778889999999999999989999999999999999998876
Q ss_pred HHHhHhhcCccccccCccHHHHHHHHhcchhhhccC
Q 045685 144 FYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARIL 179 (199)
Q Consensus 144 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 179 (199)
+.... ..... .+++|+|.+|++++.++|++++++
T Consensus 82 ~~~~~-~~~~~-~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 82 FAHVD-PKWFD-QSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHhh-hcccC-cccCHHHHHHHHHHHcChHHHhhC
Confidence 65421 11122 378999999999999999999864
No 28
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.72 E-value=8.1e-17 Score=110.35 Aligned_cols=109 Identities=15% Similarity=0.293 Sum_probs=89.3
Q ss_pred hhhhchhhHHHHhccC-CcchhHHHHHHHHHHHHHHhhhCC----------------CCccccCCCChhHHHHHhHHHHH
Q 045685 82 IDKKVFDAVCNIRKSK-GEVPETAKNEFIEILKQLEGALGE----------------KDFFGGDSFGFVHVIAIPLTCWF 144 (199)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~----------------~~~l~G~~~t~aD~~l~~~l~~~ 144 (199)
..+.+++.+..++++. ++..+...+.+.+.|..+|+.|++ ++|++|+++|+|||.++|.+.++
T Consensus 7 ~~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~ 86 (134)
T cd03198 7 AGEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIV 86 (134)
T ss_pred hHHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3455788888887764 556777888999999999999976 67999999999999999999877
Q ss_pred HHhHh-hcCccccccCccHHHHHHHHhcchhhhccCCCchHHHHHHH
Q 045685 145 YAVEK-FGGVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFVI 190 (199)
Q Consensus 145 ~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 190 (199)
..+.. ..+..++.++|+|.+|++||.++|+|+++++..+.++..++
T Consensus 87 ~~~~~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 87 KVVAKKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HHHHHhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 65321 12455457899999999999999999999999888877654
No 29
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.70 E-value=2.1e-16 Score=107.46 Aligned_cols=107 Identities=18% Similarity=0.284 Sum_probs=84.3
Q ss_pred hhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCC-CCccccCCCChhHHHHHhHHHHHHHh-HhhcCccccccCc
Q 045685 83 DKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGE-KDFFGGDSFGFVHVIAIPLTCWFYAV-EKFGGVKVENECP 160 (199)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~p 160 (199)
...+++.+..++.+.+.. ++..+.+.+.|..||+.|++ ++|++||++|+||+++++.+.++... ....+..+.+.+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P 89 (121)
T cd03201 11 GSKIFSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLT 89 (121)
T ss_pred HHHHHHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccch
Confidence 344666666666655443 66778899999999999984 79999999999999999988777643 2112333347899
Q ss_pred cHHHHHHHHhcchhhhccCCCchHHHHHHH
Q 045685 161 KFSAWMNKCMQRDTVARILPDPEKVYEFVI 190 (199)
Q Consensus 161 ~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 190 (199)
+|.+|+++|.++|+|+++++..+++.+.++
T Consensus 90 ~l~~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 90 SVKSYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 999999999999999999999888877664
No 30
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.69 E-value=4e-16 Score=106.09 Aligned_cols=114 Identities=18% Similarity=0.329 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHHHhhhhchhhH-HHHhccCCcchhHHHHHHHHHHHHHHhhhC---CCCccccCCCChhHHHHHhHHHH
Q 045685 68 RAYGTAKTRFWADFIDKKVFDAV-CNIRKSKGEVPETAKNEFIEILKQLEGALG---EKDFFGGDSFGFVHVIAIPLTCW 143 (199)
Q Consensus 68 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~aD~~l~~~l~~ 143 (199)
|+.+|+.+++++.+... +...+ ...+.+. . .+.+.+.++.||+.|+ +++|++| ++|+|||+++|.+.+
T Consensus 1 d~~~ra~~~~~~~~~~~-~~~~~~~~~~~~~--~----~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~ 72 (120)
T cd03203 1 DPAKREFADELLAYTDA-FTKALYSSLIKGD--P----SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIER 72 (120)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC--c----hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHH
Confidence 56789999999888333 22222 2222221 1 2344667778888885 5899999 999999999999987
Q ss_pred HHHh-HhhcCccccccCccHHHHHHHHhcchhhhccCCCchHHHHHH
Q 045685 144 FYAV-EKFGGVKVENECPKFSAWMNKCMQRDTVARILPDPEKVYEFV 189 (199)
Q Consensus 144 ~~~~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 189 (199)
+... ....+.++..++|+|.+|+++|.++|+++++.++.+++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 73 FQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 7542 223345554689999999999999999999999988888764
No 31
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.68 E-value=1.7e-16 Score=106.84 Aligned_cols=104 Identities=20% Similarity=0.390 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhccC---------CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRKSK---------GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLT 141 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 141 (199)
+|+.+++|+.+.++.+.+.+....... +...+...+.+.+.+..+|+.|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 578999999999998888876544321 12234567789999999999999889999999999999999998
Q ss_pred HHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccC
Q 045685 142 CWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARIL 179 (199)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 179 (199)
.++... +.++ +++|+|.+|+++|.++|++++++
T Consensus 82 ~~~~~~----~~~~-~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGV----GLDL-SDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhc----CCCh-hhChHHHHHHHHHHhCHHhHhhC
Confidence 776542 2333 68999999999999999999864
No 32
>PLN02907 glutamate-tRNA ligase
Probab=99.68 E-value=8.1e-16 Score=131.50 Aligned_cols=135 Identities=14% Similarity=0.143 Sum_probs=105.7
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC----------------------CCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP----------------------TWPSPP 63 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP----------------------~~~~~~ 63 (199)
++||+.+.| .+.++.++|++.|++|+.+.. +|. |+|| .++...
T Consensus 3 ~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~~-------------~p~-GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~ 67 (722)
T PLN02907 3 AKLSFPPDS-PPLAVIAAAKVAGVPLTIDPS-------------LKS-GSAPTLLFSSGEKLTGTNVLLRYIARSASLPG 67 (722)
T ss_pred EEEEECCCC-ChHHHHHHHHHcCCCcEEeec-------------CCC-CCCcEEEECCCCEEECHHHHHHHHHHhCCCcC
Confidence 899988766 577899999999999998652 455 7887 455667
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHH
Q 045685 64 LLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCW 143 (199)
Q Consensus 64 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 143 (199)
|+|.++.+++.+++|+.+...... ...+.+.++.||++|++++||+|+++|+||+++++.+..
T Consensus 68 L~p~d~~erAqV~qWL~~~~~~~~-----------------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~ 130 (722)
T PLN02907 68 FYGQDAFESSQVDEWLDYAPTFSS-----------------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAG 130 (722)
T ss_pred CCCCCHHHHHHHHHHHHHHhhccc-----------------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHh
Confidence 899999999999999998754210 124567889999999989999999999999999998854
Q ss_pred HHHhHhhcCccccccCccHHHHHHHHhcchh
Q 045685 144 FYAVEKFGGVKVENECPKFSAWMNKCMQRDT 174 (199)
Q Consensus 144 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 174 (199)
.... .........||+|.+|+++|.++|+
T Consensus 131 ~~~~--~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 131 SGQR--WESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred hhhh--hhcccccccCHHHHHHHHHHHhCCC
Confidence 4111 1112224789999999999999999
No 33
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.63 E-value=1.7e-15 Score=103.13 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHhhhhchhhHHH----Hhc-c-C--Cc-chhHHHHHHHHHHHHHHhhhC--CCCccccCCCChhHHHHH
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCN----IRK-S-K--GE-VPETAKNEFIEILKQLEGALG--EKDFFGGDSFGFVHVIAI 138 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~----~~~-~-~--~~-~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~ 138 (199)
.+|+.+++|+.++++.+.+.+.. ... . . +. ..+.....+.+.|..+|+.|+ +++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 57899999999999887764321 111 1 1 11 112344668899999999997 458999999999999999
Q ss_pred hHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCC
Q 045685 139 PLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 139 ~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
+.+.++... +.++ +.+|+|++|++++.++|+++++++.
T Consensus 82 ~~~~~~~~~----~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 82 PQVYNARRF----GVDL-SPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHh----CCCc-ccCcHHHHHHHHHHhChhHHHhCcC
Confidence 998766542 3444 7899999999999999999998764
No 34
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.63 E-value=3.9e-15 Score=100.68 Aligned_cols=104 Identities=18% Similarity=0.294 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHHHhhhhchhhHHHHhcc-----C--------CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhH
Q 045685 68 RAYGTAKTRFWADFIDKKVFDAVCNIRKS-----K--------GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVH 134 (199)
Q Consensus 68 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD 134 (199)
|+.+|+.+++|..+++..+.+.+...+.. . +...+.....+.+.|..||+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 56789999999999888877766544321 0 1223566778999999999999888999999999999
Q ss_pred HHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhh
Q 045685 135 VIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTV 175 (199)
Q Consensus 135 ~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 175 (199)
|++++.+.++... +.++...+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVV----KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhc----CCCCccccHHHHHHHHHHHhccCC
Confidence 9999999876542 344446899999999999999974
No 35
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.61 E-value=5.6e-15 Score=100.20 Aligned_cols=103 Identities=18% Similarity=0.237 Sum_probs=81.0
Q ss_pred CCCHHHHHHHHHHHHHhhhhchhhHHHH-hcc---C-----------CcchhHHHHHHHHHHHHHHhhhCCCCccccCCC
Q 045685 66 PSRAYGTAKTRFWADFIDKKVFDAVCNI-RKS---K-----------GEVPETAKNEFIEILKQLEGALGEKDFFGGDSF 130 (199)
Q Consensus 66 p~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~---~-----------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~ 130 (199)
|.++.+|+.+++|+.+....+.+.+... +.. . ....+.....+.+.|+.+|+.|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 5688999999999999998888776432 111 1 112234556789999999999998999999999
Q ss_pred ChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcch
Q 045685 131 GFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRD 173 (199)
Q Consensus 131 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 173 (199)
|+|||++++.+.++... +.. ...+|+|.+|++++.++|
T Consensus 82 t~ADi~l~~~~~~~~~~----~~~-~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALAR----GPL-LEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHc----Ccc-cccCchHHHHHHHHhcCC
Confidence 99999999988877542 223 478999999999999886
No 36
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.61 E-value=2.5e-15 Score=101.03 Aligned_cols=105 Identities=17% Similarity=0.271 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHh-----cc--CCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIR-----KS--KGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCW 143 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 143 (199)
+|+.+++|+.+.+..+.+.+...+ .. ++...+...+.+.+.++.+|+.|++++|++|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 478899999999888877654321 11 13334556788999999999999988999999999999999999887
Q ss_pred HHHhHhhcCccccccCccHHHHHHHHhcchhhhccC
Q 045685 144 FYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARIL 179 (199)
Q Consensus 144 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 179 (199)
.... +.+....+|+|.+|++++.++|++++++
T Consensus 81 ~~~~----~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWI----GIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhc----cccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 6543 2332478999999999999999999864
No 37
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.61 E-value=4.5e-15 Score=100.42 Aligned_cols=106 Identities=19% Similarity=0.337 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhhhhchhhHHHH-----hcc---C---CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHh
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNI-----RKS---K---GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIP 139 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~-----~~~---~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~ 139 (199)
+|+.+.+|+.+....+.+.+... +.. . +...+.....+.+.++.+|++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 57889999998887777665432 111 1 122345677899999999999998999999999999999999
Q ss_pred HHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccC
Q 045685 140 LTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARIL 179 (199)
Q Consensus 140 ~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 179 (199)
++.++.... .....+++|+|.+|++++.++|++++++
T Consensus 82 ~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATP---FAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHcc---chhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 987765321 1112368999999999999999998764
No 38
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.59 E-value=1.2e-14 Score=98.56 Aligned_cols=105 Identities=16% Similarity=0.229 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhc----cCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRK----SKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYA 146 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~ 146 (199)
+++.+.+|+.+....+.+.+...+. .++...+.....+.+.+..+|+.|++++|++|+++|+||+++++++.++..
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~ 81 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEA 81 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHH
Confidence 5788999998887777665543322 233456777888999999999999888999999999999999999987764
Q ss_pred hHhhcCccccccCccHHHHHHHHhcchhhhccC
Q 045685 147 VEKFGGVKVENECPKFSAWMNKCMQRDTVARIL 179 (199)
Q Consensus 147 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 179 (199)
. .+.+. ..+|+|.+|+++|.++|++++..
T Consensus 82 ~---~~~~~-~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 82 L---LPLDL-SKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred h---cCCCh-hhCchHHHHHHHHHcccchHHHH
Confidence 1 23333 67999999999999999999865
No 39
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.59 E-value=1.3e-14 Score=98.82 Aligned_cols=108 Identities=11% Similarity=0.171 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhcc-C-CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRKS-K-GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVE 148 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 148 (199)
++++++++++.+.+.. ..+..++.. + +...+.....+.+.+..||+.|++++|++|+++|+||+++++.+.++....
T Consensus 2 e~~~id~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~ 80 (121)
T cd03209 2 ERIRVDMLEQQAMDLR-MGLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFE 80 (121)
T ss_pred chHHHHHHHHHHHHHH-HHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhC
Confidence 4678888888777633 333333222 2 233455677788999999999988899999999999999999998876531
Q ss_pred hhcCccccccCccHHHHHHHHhcchhhhccCCCch
Q 045685 149 KFGGVKVENECPKFSAWMNKCMQRDTVARILPDPE 183 (199)
Q Consensus 149 ~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 183 (199)
....+.||+|.+|++|+.++|++++++.++.
T Consensus 81 ----~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~ 111 (121)
T cd03209 81 ----PDCLDAFPNLKDFLERFEALPKISAYMKSDR 111 (121)
T ss_pred ----ccccccChHHHHHHHHHHHCHHHHHHHhccc
Confidence 2224789999999999999999999987654
No 40
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.57 E-value=1.5e-14 Score=98.60 Aligned_cols=111 Identities=14% Similarity=0.256 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhcc-------CCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRKS-------KGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCW 143 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 143 (199)
+|+.+++|..+++..+.+.+...+.. +....+...+.+.+.|+.+|+.|++++|++|+++|+||+++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 47889999999998888876543321 12334567778899999999999988999999999999999999887
Q ss_pred HHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCCch
Q 045685 144 FYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDPE 183 (199)
Q Consensus 144 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 183 (199)
..... .+....+.+|++.+|++++.++|++++++.+..
T Consensus 81 ~~~~~--~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 81 GFTYV--FDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHHH--cCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 64321 122223679999999999999999999987643
No 41
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.57 E-value=1.4e-14 Score=99.35 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhccC-CcchhHHHHHHHHHHHHHHhhhCC---CCccccCCCChhHHHHHhHHHHHH
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRKSK-GEVPETAKNEFIEILKQLEGALGE---KDFFGGDSFGFVHVIAIPLTCWFY 145 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~ 145 (199)
.+++.++++++.+.+.. ..+..++... +...+...+.+.+.|..||+.|++ ++|++|+++|+||+++++.+.++.
T Consensus 2 ~e~~~vd~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~ 80 (126)
T cd03210 2 KEAALIDMVNDGVEDLR-LKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHL 80 (126)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHH
Confidence 35778888877776533 3333333222 233455677788999999999963 589999999999999999998776
Q ss_pred HhHhhcCccccccCccHHHHHHHHhcchhhhccCCCch
Q 045685 146 AVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPDPE 183 (199)
Q Consensus 146 ~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 183 (199)
... ... ...+|+|.+|++||.++|++++++....
T Consensus 81 ~~~---~~~-~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 81 VLA---PGC-LDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred HhC---hHh-hhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 431 122 4789999999999999999999986543
No 42
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=2.9e-14 Score=95.19 Aligned_cols=100 Identities=12% Similarity=0.276 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhc----cC-C----cchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRK----SK-G----EVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLT 141 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~----~~-~----~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 141 (199)
+|+.+++|+.+..+.+.+.+...+. .. + ...+...+.+.+.|+.+|+.|++++|++|+++|+||+++++.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 4788999999998888887654321 11 1 1234567789999999999999889999999999999999988
Q ss_pred HHHHHhHhhcCccccccCccHHHHHHHHhcchhh
Q 045685 142 CWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTV 175 (199)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 175 (199)
...... +.. ...+|+|.+|+++|.++|+|
T Consensus 82 ~~~~~~----~~~-~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFEL----PIE-RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHc----ccc-cccCchHHHHHHHHHhCCCC
Confidence 533321 222 47899999999999999975
No 43
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=8.5e-15 Score=96.84 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=75.8
Q ss_pred HHHHHhhhhchhhHHHHhcc-CCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccc
Q 045685 77 FWADFIDKKVFDAVCNIRKS-KGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKV 155 (199)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~ 155 (199)
+|+.+..+.+.+.+...+.. .+...+....++.+.++.||+.|++++|++|+++|+|||++++.+.+.... + .
T Consensus 3 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~ 76 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAMGIEEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G--L 76 (103)
T ss_pred eeeeeccccccHHHHHHHcCCCcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--C
Confidence 34445555555554433322 233456677889999999999999889999999999999999999877642 2 2
Q ss_pred cccCccHHHHHHHHhcchhhhccCCC
Q 045685 156 ENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 156 ~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
...+|+|++|++++.++|++++++..
T Consensus 77 ~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 77 LPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred CCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 36899999999999999999998653
No 44
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.56 E-value=5.7e-14 Score=104.75 Aligned_cols=161 Identities=18% Similarity=0.324 Sum_probs=105.9
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------------
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP--------------------------- 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP--------------------------- 57 (199)
+++||.|..||||-+||.+|.+.||+|++++|++- .+.+ .+-+-. +|||
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV-~r~e--Ik~Ssy-kKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPV-LRQE--IKWSSY-KKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecch-hhhh--cccccc-ccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 68999999999999999999999999999999986 3222 233433 7899
Q ss_pred --------CCCC---------------CCCC-------C-CCHHHHHHHHHHHHHhhhhc----hhhHHHHh--------
Q 045685 58 --------TWPS---------------PPLL-------P-SRAYGTAKTRFWADFIDKKV----FDAVCNIR-------- 94 (199)
Q Consensus 58 --------~~~~---------------~~l~-------p-~~~~~~a~~~~~~~~~~~~~----~~~~~~~~-------- 94 (199)
-||. ..++ | .+-..+...+.|-.|.++.+ .|.+++..
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFe 245 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFE 245 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHH
Confidence 1120 0000 0 01112223455666666543 23322210
Q ss_pred --c--------------------------------cCCcchhHHHHHHHHHHHHHHhhh-CCCCccccCCCChhHHHHHh
Q 045685 95 --K--------------------------------SKGEVPETAKNEFIEILKQLEGAL-GEKDFFGGDSFGFVHVIAIP 139 (199)
Q Consensus 95 --~--------------------------------~~~~~~~~~~~~~~~~l~~le~~L-~~~~~l~G~~~t~aD~~l~~ 139 (199)
. .+.......++.+..+++.+-..| .+++|++|++|++||+.+++
T Consensus 246 wf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfG 325 (370)
T KOG3029|consen 246 WFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFG 325 (370)
T ss_pred HHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhh
Confidence 0 011222336777888888888888 46899999999999999999
Q ss_pred HHHHHHHhHhhcCccccccCccHHHHHHHHhcc
Q 045685 140 LTCWFYAVEKFGGVKVENECPKFSAWMNKCMQR 172 (199)
Q Consensus 140 ~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 172 (199)
.+..+...... .++ -...+|..|+-+|++.
T Consensus 326 vl~sm~gc~af--kd~-~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 326 VLRSMEGCQAF--KDC-LQNTSIGEWYYRMEAL 355 (370)
T ss_pred hhhHhhhhhHH--HHH-HhcchHHHHHHHHHHH
Confidence 99877665322 233 5678999999998753
No 45
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.54 E-value=2.8e-14 Score=97.75 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhhhchhhHHHH-----h----cc---CCcchhHHHHHHHHHHHHHHhhh-CCCCccccCCCChhHHHHH
Q 045685 72 TAKTRFWADFIDKKVFDAVCNI-----R----KS---KGEVPETAKNEFIEILKQLEGAL-GEKDFFGGDSFGFVHVIAI 138 (199)
Q Consensus 72 ~a~~~~~~~~~~~~~~~~~~~~-----~----~~---~~~~~~~~~~~~~~~l~~le~~L-~~~~~l~G~~~t~aD~~l~ 138 (199)
++.+++|+.+....+.+.+... . .. .+...+...+.+.+.+..+|+.| ++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 5677888888877666554321 1 11 12233456677889999999984 5578999999999999999
Q ss_pred hHHHHHHHhHhhcCccccccCccHHHHHHHHhc--chhhhccC
Q 045685 139 PLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQ--RDTVARIL 179 (199)
Q Consensus 139 ~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~~ 179 (199)
+.+.+.... +.+....+|+|.+|++++.+ +|++++++
T Consensus 82 ~~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 82 CEIMQPEAA----GYDVFEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHhc----CCcccccCchHHHHHHHHHHhcchhHHHHH
Confidence 988766542 33334789999999999999 89998864
No 46
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.53 E-value=6.1e-14 Score=97.46 Aligned_cols=107 Identities=11% Similarity=0.109 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhccCCcchh----H-HHHHHHHHHHHHHhhhC--CCCccccCCCChhHHHHHhHHH
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPE----T-AKNEFIEILKQLEGALG--EKDFFGGDSFGFVHVIAIPLTC 142 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~~~l~ 142 (199)
.+++.++++++.+.+.+...+. +....++..+ . ....+.+.|..||+.|+ +++|++|+++|+||+++++.+.
T Consensus 2 ~e~a~iD~i~~~v~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~ 80 (137)
T cd03208 2 KERALIDMYVEGTADLMEMILM-LPFLPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAIL 80 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHH
Confidence 3577888888887765544332 2222222222 2 22345789999999997 6789999999999999999998
Q ss_pred HHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCCC
Q 045685 143 WFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILPD 181 (199)
Q Consensus 143 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 181 (199)
++.... ......+|+|.+|++||.++|++++++..
T Consensus 81 ~~~~~~----~~~l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 81 MVEELD----PSLLSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHhc----hhhhccChHHHHHHHHHHcCHHHHHHHhc
Confidence 776431 22247899999999999999999999864
No 47
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=2.7e-14 Score=106.29 Aligned_cols=83 Identities=19% Similarity=0.247 Sum_probs=70.7
Q ss_pred CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhH-hhcCccc--cccCccHHHHHHHHhcchh
Q 045685 98 GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVE-KFGGVKV--ENECPKFSAWMNKCMQRDT 174 (199)
Q Consensus 98 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~-~~~~~~~--~~~~p~l~~~~~~~~~~p~ 174 (199)
++.-++..+.+-+.|+.+|+.|+++.|++||++|-||+-+++.|.+|+.+- .++..++ ..+||+|..|...+.+.|.
T Consensus 200 q~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg 279 (324)
T COG0435 200 QEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPG 279 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcc
Confidence 456678888899999999999999999999999999999999999998863 2222222 4679999999999999999
Q ss_pred hhccCC
Q 045685 175 VARILP 180 (199)
Q Consensus 175 ~~~~~~ 180 (199)
|+.++.
T Consensus 280 ~~~T~d 285 (324)
T COG0435 280 FAETVD 285 (324)
T ss_pred cccccc
Confidence 999974
No 48
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.52 E-value=1.9e-13 Score=101.36 Aligned_cols=156 Identities=17% Similarity=0.215 Sum_probs=106.6
Q ss_pred CcEEEEccC-------CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC-------------------
Q 045685 4 GAVVLLDCW-------ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP------------------- 57 (199)
Q Consensus 4 ~~~~Ly~~~-------~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP------------------- 57 (199)
..+-||.|+ .||||.++..+|+..+||||.+.-.+. ..++. |++|
T Consensus 44 D~VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~~--------~rSr~-G~lPFIELNGe~iaDS~~I~~~L 114 (281)
T KOG4244|consen 44 DTVYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSLK--------RRSRN-GTLPFIELNGEHIADSDLIEDRL 114 (281)
T ss_pred CeEEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccce--------eeccC-CCcceEEeCCeeccccHHHHHHH
Confidence 347788875 599999999999999999998776552 34666 8999
Q ss_pred -CCCC-CCCCCCCHHHHHHHHHHHHHhhhhchhhHH----------------------------HHh-----cc------
Q 045685 58 -TWPS-PPLLPSRAYGTAKTRFWADFIDKKVFDAVC----------------------------NIR-----KS------ 96 (199)
Q Consensus 58 -~~~~-~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~----------------------------~~~-----~~------ 96 (199)
++-+ +.. -++++++..+++...+++++.-.+. +++ ..
T Consensus 115 ~~hf~~~~~--L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~ 192 (281)
T KOG4244|consen 115 RKHFKIPDD--LSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRS 192 (281)
T ss_pred HHHcCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHh
Confidence 1111 111 2456677777666655544322211 111 00
Q ss_pred C----CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcC-cc-ccccCccHHHHHHHHh
Q 045685 97 K----GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGG-VK-VENECPKFSAWMNKCM 170 (199)
Q Consensus 97 ~----~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~-~~-~~~~~p~l~~~~~~~~ 170 (199)
. +-..++..+.+.+-|..++..|++++||.|+++|-+|+.+++.|..+-. +-... .+ +.+++|+|..|++||.
T Consensus 193 ~g~IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr 271 (281)
T KOG4244|consen 193 TGAIGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIR 271 (281)
T ss_pred hccccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHH
Confidence 0 1234556677788899999999999999999999999999998864443 10001 11 2688999999999997
Q ss_pred c
Q 045685 171 Q 171 (199)
Q Consensus 171 ~ 171 (199)
+
T Consensus 272 ~ 272 (281)
T KOG4244|consen 272 K 272 (281)
T ss_pred H
Confidence 4
No 49
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=2.6e-14 Score=105.42 Aligned_cols=112 Identities=18% Similarity=0.222 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHh-ccCCcchhHHHHHHHHHHHHHHhhhCCCC--ccccCCCChhHHHHHhHHHHHHHh
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIR-KSKGEVPETAKNEFIEILKQLEGALGEKD--FFGGDSFGFVHVIAIPLTCWFYAV 147 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~~~ 147 (199)
.++.++.+-+|+.+.+..-++..- ..+++.-+...+++.+.|+.+|+.|+.+. |++|+++|-||+.+++.+.+|+.+
T Consensus 170 L~~~Ide~N~wvy~~INNGVYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~V 249 (319)
T KOG2903|consen 170 LRAQIDETNSWVYDKINNGVYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEV 249 (319)
T ss_pred HHHHHhhhhceecccccCceeeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhh
Confidence 355666666666655544444322 22456778888999999999999998765 999999999999999999999876
Q ss_pred H-hhcCcc---ccccCccHHHHHHHHhc-chhhhccCCCc
Q 045685 148 E-KFGGVK---VENECPKFSAWMNKCMQ-RDTVARILPDP 182 (199)
Q Consensus 148 ~-~~~~~~---~~~~~p~l~~~~~~~~~-~p~~~~~~~~~ 182 (199)
- .++..+ +.++||+|..|..++.. +|+|+.+..-.
T Consensus 250 Y~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~Ttd~~ 289 (319)
T KOG2903|consen 250 YVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSSTTDFN 289 (319)
T ss_pred hheeeecchhhhhccCcHHHHHHHHHHhhccchhhccchh
Confidence 3 122222 25799999999999998 99999987433
No 50
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.49 E-value=2.4e-13 Score=91.57 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHH-----hccC--CcchhHHHHHHHHHHHHHHhhhC-CCCccccCCCChhHHHHHhH
Q 045685 69 AYGTAKTRFWADFIDKKVFDAVCNI-----RKSK--GEVPETAKNEFIEILKQLEGALG-EKDFFGGDSFGFVHVIAIPL 140 (199)
Q Consensus 69 ~~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~ 140 (199)
+.+|++++.|+.++.+.+.+..... +... +...+.....+.+.+..+|..|+ +++|++|+ +|+||+++++.
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G~-fSiAD~~l~~~ 79 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFGE-WCIADTDLALM 79 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccCC-ccHHHHHHHHH
Confidence 3579999999999999988753211 1111 22456778888999999999995 55899994 99999999999
Q ss_pred HHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccCC
Q 045685 141 TCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARILP 180 (199)
Q Consensus 141 l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 180 (199)
+.|+... +.++ . |++.+|.+||.++|+|++.+.
T Consensus 80 ~~~~~~~----g~~l-~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 80 LNRLVLN----GDPV-P--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHc----CCCC-C--HHHHHHHHHHHCCHHHHHHHh
Confidence 9888763 4555 3 999999999999999998763
No 51
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.49 E-value=1.3e-13 Score=89.62 Aligned_cols=70 Identities=20% Similarity=0.419 Sum_probs=60.8
Q ss_pred chhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCcccc-ccCccHHHHHHHHhcch
Q 045685 100 VPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVE-NECPKFSAWMNKCMQRD 173 (199)
Q Consensus 100 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~-~~~p~l~~~~~~~~~~p 173 (199)
..+...+.+.+.|..+|+.|++++|++|+++|+||+++++.+.++.... .... .++|+|.+|+++|.++|
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~----~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLG----PDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHT----TTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhC----CCcccccCHHHHHHHHHHHcCC
Confidence 4667788899999999999999999999999999999999999888753 3333 89999999999999987
No 52
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.45 E-value=2.6e-13 Score=89.20 Aligned_cols=94 Identities=20% Similarity=0.307 Sum_probs=68.8
Q ss_pred HHHHHhhhhchhhHHHHh----ccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcC
Q 045685 77 FWADFIDKKVFDAVCNIR----KSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGG 152 (199)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~ 152 (199)
+|..+..+.+.+...... ...+...+....++.+.+..+|+.|++++|++|+++|+||+++++++.+... ..
T Consensus 3 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~ 78 (100)
T cd03206 3 RWLSVAAGEIANGPAAARLITLFGAPLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GG 78 (100)
T ss_pred eehhhhhhhcccchhHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cC
Confidence 455666655544322111 1112245667889999999999999999999999999999999998865432 12
Q ss_pred ccccccCccHHHHHHHHhcchhh
Q 045685 153 VKVENECPKFSAWMNKCMQRDTV 175 (199)
Q Consensus 153 ~~~~~~~p~l~~~~~~~~~~p~~ 175 (199)
.. .+++|+|.+|+++|.++|++
T Consensus 79 ~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 79 VD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred CC-hhhCcHHHHHHHHHHhCcCC
Confidence 23 37899999999999999975
No 53
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.44 E-value=2.9e-13 Score=89.64 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhc-----c-C---CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRK-----S-K---GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLT 141 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~-----~-~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 141 (199)
+|+.+++|+.+.++.+.+.+..... . . ++..+....++.+.++.+|+.|++++|++|+++|+||+++++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 5889999999988877776553211 1 1 23456778889999999999998889999999999999999999
Q ss_pred HHHHHhHhhcCccccccCccHHHHHHHHh
Q 045685 142 CWFYAVEKFGGVKVENECPKFSAWMNKCM 170 (199)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 170 (199)
.++... +.+ ..++|+|.+|+++++
T Consensus 82 ~~~~~~----~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADEG----GFD-LADYPAIRAWLARIE 105 (105)
T ss_pred Hhcccc----CCC-hHhCccHHHHHHhhC
Confidence 876542 333 377999999999874
No 54
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.43 E-value=2.9e-13 Score=82.87 Aligned_cols=67 Identities=21% Similarity=0.367 Sum_probs=56.3
Q ss_pred chhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHH
Q 045685 100 VPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNK 168 (199)
Q Consensus 100 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~ 168 (199)
..++..+.+.+.|+.+|+.|++++|++|+++|+||+++++++.++..... +.++...+|+|.+|++|
T Consensus 3 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 3 AVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCccccCHHHHHHHhC
Confidence 45778899999999999999999999999999999999999998888632 23345899999999986
No 55
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.39 E-value=3.6e-12 Score=85.78 Aligned_cols=73 Identities=16% Similarity=0.333 Sum_probs=57.5
Q ss_pred chhHHHHHHHHHHHHHHhhh---CCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhh
Q 045685 100 VPETAKNEFIEILKQLEGAL---GEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVA 176 (199)
Q Consensus 100 ~~~~~~~~~~~~l~~le~~L---~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 176 (199)
..+...+.+.+.+..+|..| ++++|++|+ +|+||+++++.+.+.... +.+. .|+|.+|++|+.++|+++
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~----~~~~---~P~l~~~~~rv~~rPsv~ 109 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY----GLPL---SPAAQAYVDALLAHPAMQ 109 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc----CCCC---CHHHHHHHHHHHCCHHHH
Confidence 45566666777777777766 467899999 999999999999877542 2332 299999999999999999
Q ss_pred ccCC
Q 045685 177 RILP 180 (199)
Q Consensus 177 ~~~~ 180 (199)
+++.
T Consensus 110 ~~~~ 113 (114)
T cd03194 110 EWIA 113 (114)
T ss_pred HHHh
Confidence 8763
No 56
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.38 E-value=1.8e-12 Score=86.28 Aligned_cols=73 Identities=19% Similarity=0.342 Sum_probs=60.6
Q ss_pred cchhHHHHHHHHHHHHHHhhhCCC----------CccccCCCChhHHHHHhHHHHHHHhHhhcCccc----cccCccHHH
Q 045685 99 EVPETAKNEFIEILKQLEGALGEK----------DFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKV----ENECPKFSA 164 (199)
Q Consensus 99 ~~~~~~~~~~~~~l~~le~~L~~~----------~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~----~~~~p~l~~ 164 (199)
...+.....+.+.|+.||++|+++ +|++|+++|+|||++++.+.++..+ +.+. ...+|+|.+
T Consensus 25 ~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 25 EYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNLEA 100 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHHHH
Confidence 345678888999999999999654 5999999999999999999887653 2222 257999999
Q ss_pred HHHHHhcchhh
Q 045685 165 WMNKCMQRDTV 175 (199)
Q Consensus 165 ~~~~~~~~p~~ 175 (199)
|++||.++|+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999985
No 57
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.38 E-value=2.8e-12 Score=83.60 Aligned_cols=87 Identities=17% Similarity=0.329 Sum_probs=69.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHH
Q 045685 63 PLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTC 142 (199)
Q Consensus 63 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~ 142 (199)
++.|.++.+++.++.|++.....+. .....++.+.+..+|++|++++|++|+++|+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~vd~~~d~~~~~l~--------------~~~~~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~ 74 (96)
T cd03200 9 GPAPNAPNAATNIDSWVDTAIFQLA--------------EGSSKEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALL 74 (96)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHh--------------cCCHHHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHH
Confidence 5889999999999999997653332 01445566788899999999999999999999999998875
Q ss_pred HHHHhHhhcCccccccCccHHHHHHHHhc
Q 045685 143 WFYAVEKFGGVKVENECPKFSAWMNKCMQ 171 (199)
Q Consensus 143 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 171 (199)
+. +.. ...+|+|.+|++||.+
T Consensus 75 ~~-------~~~-~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 75 QT-------GLA-SAAPANVQRWLKSCEN 95 (96)
T ss_pred Hc-------ccc-cccChHHHHHHHHHHh
Confidence 32 122 2679999999999975
No 58
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.37 E-value=1.7e-12 Score=84.75 Aligned_cols=92 Identities=22% Similarity=0.442 Sum_probs=71.1
Q ss_pred HHHHHHhhhhchhhHHHHhccC-------CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhH
Q 045685 76 RFWADFIDKKVFDAVCNIRKSK-------GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVE 148 (199)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 148 (199)
+.|+.+++..+.+.+...+... +...+...+.+.+.++.+|+.|++++|++|+++|+||+++++++.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 5677777777766665543321 344567788899999999999998999999999999999999999887753
Q ss_pred hhcCccccccCccHHHHHHHH
Q 045685 149 KFGGVKVENECPKFSAWMNKC 169 (199)
Q Consensus 149 ~~~~~~~~~~~p~l~~~~~~~ 169 (199)
.... +...+|++.+|+++|
T Consensus 82 ~~~~--~~~~~p~l~~~~~~~ 100 (100)
T cd00299 82 PLLG--LLDEYPRLAAWYDRL 100 (100)
T ss_pred hhhh--hhccCccHHHHHHhC
Confidence 2111 247899999999875
No 59
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.35 E-value=1.5e-12 Score=85.39 Aligned_cols=96 Identities=19% Similarity=0.296 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCC--ccccCCCChhHHHHHhHHHHHH
Q 045685 68 RAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKD--FFGGDSFGFVHVIAIPLTCWFY 145 (199)
Q Consensus 68 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~ 145 (199)
++..++.+.+|+++.. ............+...+...+.+.+.+..+++.|+++. ||+|++||+||+++++.|..+.
T Consensus 2 ~~~~~a~i~~W~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~ 79 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV--AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLR 79 (99)
T ss_dssp --TTHHHHHHHHH-GH--CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccc--hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHh
Confidence 3456777788888441 00000000111245567788899999999999997766 9999999999999999885444
Q ss_pred HhHhhcCccccccCccHHHHHHHHhc
Q 045685 146 AVEKFGGVKVENECPKFSAWMNKCMQ 171 (199)
Q Consensus 146 ~~~~~~~~~~~~~~p~l~~~~~~~~~ 171 (199)
. . .++.++|+|.+|++||++
T Consensus 80 ~-----~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 80 W-----A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp C-----C-HHTTTCHHHHHHHHHHHT
T ss_pred h-----c-ccccccHHHHHHHHhhcC
Confidence 2 2 233689999999999974
No 60
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.35 E-value=2e-12 Score=79.54 Aligned_cols=49 Identities=31% Similarity=0.499 Sum_probs=47.0
Q ss_pred EEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 7 VLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 7 ~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+||+++.||||+|++++|+++|++|+.+.++.. ++++++.++||. |+||
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~-~~~~~~~~~np~-~~vP 50 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELK-NKPAEMLAASPK-GTVP 50 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC-CCCHHHHHHCCC-CCCC
Confidence 799999999999999999999999999999988 888999999999 9999
No 61
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.32 E-value=3.9e-12 Score=78.62 Aligned_cols=52 Identities=31% Similarity=0.343 Sum_probs=48.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPTW 59 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP~~ 59 (199)
|+||+++.||+|+|++++|+++|++|+.+.++.. ++++++++.||. |+||..
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~-~~~~~~~~~~p~-~~vP~l 52 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD-NPPEDLAELNPY-GTVPTL 52 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC-CCCHHHHhhCCC-CCCCEE
Confidence 6899999999999999999999999999999988 888999999999 899933
No 62
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.31 E-value=4.3e-12 Score=78.44 Aligned_cols=51 Identities=24% Similarity=0.316 Sum_probs=46.7
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP 57 (199)
++||+++.||+|+|+|++|+++|++|+.+.+++.. +++++|.++||. |+||
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~-g~vP 53 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPT-GEVP 53 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcC-CCCC
Confidence 47999999999999999999999999999998742 567899999999 9999
No 63
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=2.2e-11 Score=85.19 Aligned_cols=161 Identities=14% Similarity=0.184 Sum_probs=99.0
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC--CCCCCCCCCC----------------
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP--TWPSPPLLPS---------------- 67 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP--~~~~~~l~p~---------------- 67 (199)
|+||-|.+||||-|+|++...+|||++...+..+ +- +.-..+--. ++|| .-.++..+|.
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nD-De-~Tp~rmiG~-KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~ 77 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLND-DE-ETPIRMIGQ-KQVPILQKEDGRAMPESLDIVHYVDELDGKPL 77 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccC-cc-cChhhhhcc-cccceEEccccccchhhhHHHHHHHHhcCchh
Confidence 6899999999999999999999999998887654 21 111222333 5899 1111111111
Q ss_pred -CHHHHHHHHHHHHHhhh----hchhhHHH-------------HhccC-C----------cchhHHHHHHHHHHHHHHhh
Q 045685 68 -RAYGTAKTRFWADFIDK----KVFDAVCN-------------IRKSK-G----------EVPETAKNEFIEILKQLEGA 118 (199)
Q Consensus 68 -~~~~~a~~~~~~~~~~~----~~~~~~~~-------------~~~~~-~----------~~~~~~~~~~~~~l~~le~~ 118 (199)
+..-+..+..|.+-+.. .+.|.+.. ++..+ + .......+++..-|+.+++.
T Consensus 78 lt~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~L 157 (215)
T COG2999 78 LTGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKL 157 (215)
T ss_pred hccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 01112234444443333 23333332 22111 1 12345566777788888888
Q ss_pred hCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhh
Q 045685 119 LGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVA 176 (199)
Q Consensus 119 L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 176 (199)
+.+..=+-| .+|.-|+.++|.|+.+..+. ++.++ ..+..|+++|.+...+.
T Consensus 158 i~~~s~~n~-~l~~ddi~vFplLRnlt~v~---gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 158 IVGPSAVNG-ELSEDDILVFPLLRNLTLVA---GIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred hcCcchhcc-ccchhhhhhhHHhccceecc---cCCCc---HHHHHHHHHHHHhhCcc
Confidence 865443444 49999999999998777753 56554 57999999998765543
No 64
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.30 E-value=1e-11 Score=82.06 Aligned_cols=95 Identities=17% Similarity=0.236 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHhcc-C-----CcchhHHHHHHHHHHHHHHhhhCC--CCccccCCCChhHHHHHhHHH
Q 045685 71 GTAKTRFWADFIDKKVFDAVCNIRKS-K-----GEVPETAKNEFIEILKQLEGALGE--KDFFGGDSFGFVHVIAIPLTC 142 (199)
Q Consensus 71 ~~a~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~l~~~l~ 142 (199)
++++++.+++.+.+ +...+...+.. . +.......+.+.+.+..+|+.|++ ++|++|+++|+||+++++++.
T Consensus 2 e~~~v~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTIAD-LRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHH
Confidence 46778888888655 33333333332 1 334556677788999999999977 899999999999999999998
Q ss_pred HHHHhHhhcCccccccCccHHHHHHHH
Q 045685 143 WFYAVEKFGGVKVENECPKFSAWMNKC 169 (199)
Q Consensus 143 ~~~~~~~~~~~~~~~~~p~l~~~~~~~ 169 (199)
++.... .......+|+|.+|++++
T Consensus 81 ~~~~~~---~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 81 YLLYLD---PKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHhhC---chhhHHhChhHHHHHHhC
Confidence 876532 111147899999999875
No 65
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.29 E-value=4.9e-12 Score=79.10 Aligned_cols=52 Identities=21% Similarity=0.235 Sum_probs=45.8
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+++.||+|+|++++|.++||+|+.+.++......+++++.||. |+||
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~-~~vP 52 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGK-VQVP 52 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCC-Cccc
Confidence 379999999999999999999999999999886541246789999999 8999
No 66
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.29 E-value=1.8e-11 Score=83.57 Aligned_cols=69 Identities=22% Similarity=0.384 Sum_probs=58.7
Q ss_pred chhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhc
Q 045685 100 VPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQ 171 (199)
Q Consensus 100 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 171 (199)
..+...+.+.+.|+.+|+.|++++|+.|+++|+||+++++.+.+.... .+.++.+++|+|.+|++||.+
T Consensus 55 ~~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 55 GREAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---CcccccccCChHHHHHHHHhc
Confidence 356778889999999999999899999999999999999999877653 234444789999999999975
No 67
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.27 E-value=9.1e-12 Score=77.18 Aligned_cols=52 Identities=27% Similarity=0.330 Sum_probs=47.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~ 58 (199)
|+||+++.||+|++++++|+++|++|+.+.+++.+ ++.+++.++||. |+||.
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~-~~vP~ 54 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQ-HTVPT 54 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcC-CCCCE
Confidence 68999999999999999999999999999998752 467899999999 89993
No 68
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.27 E-value=9.5e-12 Score=77.37 Aligned_cols=48 Identities=35% Similarity=0.504 Sum_probs=46.3
Q ss_pred EEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 8 LLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 8 Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
||++..||||+|+|++|.++||+|+.+.++.. .+++++.+.||. |+||
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~-~~~~~~~~~~p~-~~vP 48 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPE-EKRPEFLKLNPK-GKVP 48 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTT-STSHHHHHHSTT-SBSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcc-cchhHHHhhccc-ccce
Confidence 89999999999999999999999999999988 889999999999 8999
No 69
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.26 E-value=2.5e-11 Score=77.84 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcC----ccccccCccHHHHHHHHh
Q 045685 103 TAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGG----VKVENECPKFSAWMNKCM 170 (199)
Q Consensus 103 ~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~----~~~~~~~p~l~~~~~~~~ 170 (199)
...+++.+.++.+|+.|++++|++|+++|+|||++++.+.++.... ... .. ..++|+|++|++|+.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~-~~~~~~~~~-~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAP-LPNSALQLI-LKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcC-CCChHHHHH-HHhCcHHHHHHHHhC
Confidence 6678899999999999999999999999999999999998775421 111 12 367999999999973
No 70
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.26 E-value=1.8e-11 Score=78.68 Aligned_cols=53 Identities=36% Similarity=0.507 Sum_probs=49.5
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP~ 58 (199)
++++||+++.||+|++++++|.++|++|+.+.++.. ++++++.+.||. |+||.
T Consensus 17 ~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~-~~~~~~~~~np~-~~vPv 69 (89)
T cd03055 17 GIIRLYSMRFCPYAQRARLVLAAKNIPHEVININLK-DKPDWFLEKNPQ-GKVPA 69 (89)
T ss_pred CcEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCC-CCcHHHHhhCCC-CCcCE
Confidence 689999999999999999999999999999999987 777889999999 89993
No 71
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.24 E-value=1.7e-11 Score=75.98 Aligned_cols=51 Identities=61% Similarity=0.937 Sum_probs=47.2
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
|+||+++.||+|+|+|++|+++|++|+.+.++.. .+++++.+.||..|+||
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~-~~~~~~~~~~p~~~~vP 51 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG-NKSELLLASNPVHKKIP 51 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc-cCCHHHHHhCCCCCCCC
Confidence 6899999999999999999999999999999888 88899999999438999
No 72
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.24 E-value=1.3e-11 Score=78.90 Aligned_cols=44 Identities=27% Similarity=0.366 Sum_probs=42.3
Q ss_pred CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 12 WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 12 ~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
..||||+|+|++|++|||+|+.+.+++. ++++||+++||. |+||
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~-~~p~~~~~~nP~-g~vP 63 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMK-RKPEDLKDLAPG-TQPP 63 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCC-CCCHHHHHhCCC-CCCC
Confidence 4799999999999999999999999999 999999999999 9999
No 73
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.24 E-value=1.8e-11 Score=75.58 Aligned_cols=51 Identities=24% Similarity=0.361 Sum_probs=46.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP 57 (199)
++||+++.||+|++++++|+++|++|+.+.++... ++++++.++||. |+||
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP 53 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN-GEVP 53 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC-CCCC
Confidence 58999999999999999999999999999998642 578899999999 8999
No 74
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.23 E-value=1.9e-11 Score=75.62 Aligned_cols=52 Identities=33% Similarity=0.405 Sum_probs=46.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~ 58 (199)
|+||+++.||+|+|+|++|.++|++|+.+.++... ++.+++.+.||. |+||.
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~ 54 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPA-GTVPV 54 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCC-CCCCE
Confidence 58999999999999999999999999999998752 457789999999 89993
No 75
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.23 E-value=2.2e-11 Score=75.29 Aligned_cols=51 Identities=27% Similarity=0.436 Sum_probs=47.5
Q ss_pred EEEEccCCChhhHHHHHHHHH--cCCceeEEEecCCCCCChhhhhhCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAE--KGVEYEARAENLFGGKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~--~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP~ 58 (199)
|+||+++.||+|+|+|++|.+ +|++|+.+.++.. ++.+++++.||. |+||.
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~-~~vP~ 53 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW-SDDESLLAVNPL-GKIPA 53 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc-cCChHHHHhCCC-CCCCE
Confidence 589999999999999999999 8999999999887 888899999999 99993
No 76
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.21 E-value=4.1e-11 Score=74.64 Aligned_cols=51 Identities=31% Similarity=0.412 Sum_probs=46.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP 57 (199)
|+||+++.||+|+++|++|.++|++|+.+.++... ++++++.++||. |+||
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~-~~vP 54 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF-GQIP 54 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC-CCCC
Confidence 79999999999999999999999999999988752 457889999999 9999
No 77
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.20 E-value=3.8e-11 Score=74.64 Aligned_cols=50 Identities=28% Similarity=0.263 Sum_probs=46.5
Q ss_pred EEEccCCChhhHHHHHHHHHcCCceeEEEecCCC-CCChhhhhhCCCCCCCC
Q 045685 7 VLLDCWANPFCLRAKIALAEKGVEYEARAENLFG-GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 7 ~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~-~~~~~~~~~~p~~g~vP 57 (199)
+||+++.||+|++++++|+++|++|+.+.++..+ +++++|+++||. |+||
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~-~~vP 52 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL-GKVP 52 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC-CCCC
Confidence 7999999999999999999999999999998753 578899999999 9999
No 78
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.15 E-value=6.8e-11 Score=72.66 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=42.2
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
|+||+++.||+|+|+|++|.++|++|+.+.++.. . .....+.+|. |+||
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~-~-~~~~~~~~~~-~~vP 49 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQND-D-EATPIRMIGA-KQVP 49 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCC-c-hHHHHHhcCC-CccC
Confidence 6899999999999999999999999999988754 3 2344678998 8999
No 79
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.13 E-value=1.2e-10 Score=72.02 Aligned_cols=53 Identities=19% Similarity=0.133 Sum_probs=46.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPTW 59 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~~ 59 (199)
|+||+++.||++++++++|+++|++|+.+.++... ++.+++.++||. |+||..
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~-~~vP~L 55 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN-GRVPVL 55 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC-CCCCEE
Confidence 58999999999999999999999999999887641 457889999999 999933
No 80
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.13 E-value=5.9e-11 Score=73.36 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=46.8
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP~ 58 (199)
++||+++.|++|+++|++|.++|++|+.+.++.. +..++++++||. |+||.
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~-~~~~~~~~~~p~-~~vP~ 52 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE-EWQESLKPKMLF-GQLPC 52 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH-HhhhhhhccCCC-CCCCE
Confidence 7999999999999999999999999999999876 666789999999 89993
No 81
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.12 E-value=1.6e-10 Score=71.33 Aligned_cols=51 Identities=31% Similarity=0.419 Sum_probs=46.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP 57 (199)
|+||+++.|++|+++|++|+++|++|+.+.++... ++.++++++||. |+||
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP 53 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ-GLVP 53 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC-CCCC
Confidence 58999999999999999999999999999998742 567899999999 8999
No 82
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.11 E-value=2e-10 Score=71.57 Aligned_cols=52 Identities=21% Similarity=0.143 Sum_probs=46.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~ 58 (199)
++||+++.|++|++++++|+++|++|+.+.++... ...+++.+.||. |+||.
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~ 54 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF-GKVPA 54 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC-CCCCE
Confidence 58999999999999999999999999999998752 346789999999 99993
No 83
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.10 E-value=2.5e-10 Score=72.01 Aligned_cols=52 Identities=27% Similarity=0.413 Sum_probs=45.9
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~ 58 (199)
+++||+++. |+|++++++|+++||+|+.+.++... +++++|.++||. |+||.
T Consensus 1 ~~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~ 54 (81)
T cd03048 1 MITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN-GRIPA 54 (81)
T ss_pred CeEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC-CCCCE
Confidence 479999875 99999999999999999999998642 567899999999 89993
No 84
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.08 E-value=1.3e-09 Score=75.58 Aligned_cols=66 Identities=15% Similarity=0.277 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHHhhhC-CCCccccCCCChhHHHHHhHHHHHHHhHhhcCc-cccccCccHHHHHHHHhc
Q 045685 102 ETAKNEFIEILKQLEGALG-EKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGV-KVENECPKFSAWMNKCMQ 171 (199)
Q Consensus 102 ~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~ 171 (199)
+..++.+...++.+-+.++ +++|++|+++|+||+++++.+..+... .++ ++ .++|+|.+|++||.+
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH---PAFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh---ccccch-hhCcCHHHHHHHHHH
Confidence 4556777777776666664 468999999999999999999766553 245 55 789999999999975
No 85
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.06 E-value=1.8e-10 Score=70.96 Aligned_cols=51 Identities=22% Similarity=0.100 Sum_probs=44.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++||+++.|++|+++|++|+++|++|+.+.++........+.++||. |+||
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~-~~vP 51 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPF-GQLP 51 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcC-CCCC
Confidence 58999999999999999999999999999988752223448889999 8999
No 86
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.06 E-value=2.5e-10 Score=71.23 Aligned_cols=49 Identities=29% Similarity=0.480 Sum_probs=42.3
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+++.||+|+++|++|.++||+|+.+.++.. ..+ + .+.+|. |+||
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~-~~~-~-~~~~~~-~~vP 49 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPV-SRK-E-IKWSSY-KKVP 49 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCch-hHH-H-HHHhCC-CccC
Confidence 58999999999999999999999999999988764 332 2 367998 8999
No 87
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.04 E-value=3.5e-09 Score=69.29 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHHHhhhhchhhHHH-----Hhcc--CCcchhHHHHHHHHHHHHHHhhhCC-CCccccCCCChhHHHHHh
Q 045685 68 RAYGTAKTRFWADFIDKKVFDAVCN-----IRKS--KGEVPETAKNEFIEILKQLEGALGE-KDFFGGDSFGFVHVIAIP 139 (199)
Q Consensus 68 ~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~ 139 (199)
|..+|++.|++..|+.+.+.+.-.. ++.+ .....++..+.+.+++...+..|+. ++||+|+ .|+||..+++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHH
Confidence 5678999999999999988775442 2222 1345677888889999999988864 6899997 9999999999
Q ss_pred HHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhhccC
Q 045685 140 LTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVARIL 179 (199)
Q Consensus 140 ~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 179 (199)
++.++... +.+++ +.+..|.++..++|+|++.+
T Consensus 80 ml~Rl~~~----gd~vP---~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 80 MLNRLVTY----GDPVP---ERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp HHHHHHTT----T-------HHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHc----CCCCC---HHHHHHHHHHHCCHHHHHHH
Confidence 99887752 44554 78999999999999999875
No 88
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.99 E-value=9e-10 Score=75.36 Aligned_cols=73 Identities=11% Similarity=0.120 Sum_probs=57.4
Q ss_pred CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhH-hhcCcc-ccccCccHHHHHHHHh
Q 045685 98 GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVE-KFGGVK-VENECPKFSAWMNKCM 170 (199)
Q Consensus 98 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~-~~~~~~-~~~~~p~l~~~~~~~~ 170 (199)
....++..+...+.|+.|+..|++++|++||+||.+|+++++++.++.... ...... ...++|+|.+|++||.
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 346678888899999999999999999999999999999999987665320 000111 1478999999999973
No 89
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.92 E-value=2.7e-09 Score=66.54 Aligned_cols=51 Identities=29% Similarity=0.303 Sum_probs=44.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPT 58 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~ 58 (199)
|+||+++.| +++++|++|.++|++|+.+.++..+ +++++++++||. |+||.
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~-~~vP~ 53 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPK-GQVPA 53 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCC-CCCCE
Confidence 589999865 6999999999999999999998752 468899999999 99993
No 90
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.91 E-value=2.3e-09 Score=65.62 Aligned_cols=44 Identities=45% Similarity=0.692 Sum_probs=36.9
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecCC--C-CCChhhhhhCCCCCCCC
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENLF--G-GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~~--~-~~~~~~~~~~p~~g~vP 57 (199)
.||||+|++++|+++||+|+...++.. + +++++|.++||. |+||
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~-~~VP 47 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPR-GKVP 47 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT--SSS
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcC-eEEE
Confidence 599999999999999999999888542 1 567899999999 8999
No 91
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.91 E-value=3.6e-09 Score=64.12 Aligned_cols=50 Identities=36% Similarity=0.478 Sum_probs=43.9
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCCh-hhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSD-LLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~-~~~~~~p~~g~vP 57 (199)
++||+++.||+|++++++|.++|++|+.+.++.. .... ++.+.+|. +++|
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~-~~~~~~~~~~~~~-~~~P 51 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLG-EGEQEEFLALNPL-GKVP 51 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCC-CCCCHHHHhcCCC-CCCC
Confidence 5899999999999999999999999999999876 4333 48889998 8999
No 92
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=98.90 E-value=3.5e-09 Score=65.78 Aligned_cols=52 Identities=25% Similarity=0.215 Sum_probs=45.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVPTW 59 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP~~ 59 (199)
|+||+++. +++++++++|+++|++|+.+.++..+ ++++++.+.||. |+||..
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l 54 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL-GKVPVL 54 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC-CCCCEE
Confidence 58999875 68999999999999999999998742 678899999999 899933
No 93
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.85 E-value=2.2e-08 Score=65.40 Aligned_cols=67 Identities=13% Similarity=0.224 Sum_probs=53.6
Q ss_pred CcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHH
Q 045685 98 GEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKC 169 (199)
Q Consensus 98 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 169 (199)
+...+.....+.+.|..+|+.|++++| +++|+|||++++.+.+..... .+.....++|+|.+|++||
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcchhhhChHHHHHHHhC
Confidence 344667788899999999999988888 889999999999998776421 1233247899999999985
No 94
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.85 E-value=7.5e-08 Score=69.30 Aligned_cols=151 Identities=14% Similarity=0.191 Sum_probs=103.0
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC----------CC---------CCCCCC-CCCHHHH
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP----------TW---------PSPPLL-PSRAYGT 72 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP----------~~---------~~~~l~-p~~~~~~ 72 (199)
-..-|..|..+|+..++||.++--+-. +| ++|. |+|| .+ .+..|- .-+..++
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~~~~Na-----ef--mSP~-G~vPllr~g~~~~aef~pIV~fVeak~~~l~s~lsE~qk 104 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVRQRANA-----EF--MSPG-GKVPLLRIGKTLFAEFEPIVDFVEAKGVTLTSWLSEDQK 104 (257)
T ss_pred cchhHHHHHHHHHHcCCCceeeecCCc-----cc--cCCC-CCCceeeecchhhhhhhHHHHHHHHhccchhhhhhhHHH
Confidence 455789999999999999998765432 33 6898 8999 01 011121 1245678
Q ss_pred HHHHHHHHHhhhhchhhHHHHh------------------------------c------------cCCcchhHHHHHHHH
Q 045685 73 AKTRFWADFIDKKVFDAVCNIR------------------------------K------------SKGEVPETAKNEFIE 110 (199)
Q Consensus 73 a~~~~~~~~~~~~~~~~~~~~~------------------------------~------------~~~~~~~~~~~~~~~ 110 (199)
+.++..++.+++.+..+-..+. + =++...++..+++.+
T Consensus 105 admra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdk 184 (257)
T KOG3027|consen 105 ADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDK 184 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHH
Confidence 8888777776654322111000 0 023456788888999
Q ss_pred HHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccc---cccCccHHHHHHHHhcc
Q 045685 111 ILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKV---ENECPKFSAWMNKCMQR 172 (199)
Q Consensus 111 ~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~~ 172 (199)
.++.|+.+|+..+||.|++||=+|..+++.+.-+.... .+..++ ...|++|-++..|+.++
T Consensus 185 c~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~-Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 185 CCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTR-LPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhc-CCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999886443321 112222 47789999999998753
No 95
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.85 E-value=9.4e-09 Score=71.29 Aligned_cols=71 Identities=18% Similarity=0.301 Sum_probs=56.1
Q ss_pred chhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCc---cccccCccHHHHHHHHhc
Q 045685 100 VPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGV---KVENECPKFSAWMNKCMQ 171 (199)
Q Consensus 100 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~ 171 (199)
..++..+...+.++.+++.|++++|++|+++|.+|+.+++++..+.... .... ....++|+|.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~-~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAP-LPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhcc-CCChHHHHHHHHCcHHHHHHHHHHH
Confidence 4667788888999999999999999999999999999999886554311 1111 114789999999999974
No 96
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.81 E-value=1.1e-08 Score=63.10 Aligned_cols=46 Identities=24% Similarity=0.363 Sum_probs=41.0
Q ss_pred cCCChhhHHHHHHHHHcCCceeEEEecCCC-CCChhhhhhCCCCCCCC
Q 045685 11 CWANPFCLRAKIALAEKGVEYEARAENLFG-GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 11 ~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~-~~~~~~~~~~p~~g~vP 57 (199)
...||+|+|++++|+++|++|+.+.++... ++.++|.++||. |+||
T Consensus 7 ~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~-g~vP 53 (73)
T cd03043 7 KNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT-GKVP 53 (73)
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC-CcCC
Confidence 468999999999999999999999998762 356899999999 9999
No 97
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.80 E-value=1.5e-08 Score=63.03 Aligned_cols=52 Identities=37% Similarity=0.376 Sum_probs=41.0
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP 57 (199)
|+|++|+..++++++|++|+++|++|+.+.++... +++++|.+.||..|+||
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP 54 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVP 54 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSS
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceee
Confidence 34555556669999999999999999999999742 55699999999746999
No 98
>PRK10638 glutaredoxin 3; Provisional
Probab=98.80 E-value=1e-08 Score=64.92 Aligned_cols=54 Identities=30% Similarity=0.418 Sum_probs=46.9
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
|+ ++++|+.+.||||++++.+|..+||+|+.+.++......+++.+.++. ++||
T Consensus 1 m~--~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~-~~vP 54 (83)
T PRK10638 1 MA--NVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGR-TTVP 54 (83)
T ss_pred CC--cEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCC-CCcC
Confidence 55 799999999999999999999999999999887651245678889998 8999
No 99
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.80 E-value=1.2e-08 Score=63.28 Aligned_cols=44 Identities=32% Similarity=0.578 Sum_probs=38.6
Q ss_pred cEEEEccC-------CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCW-------ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~-------~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+++ .||+|+|++++|+++|++|+.+.++.. +.+|. |+||
T Consensus 1 m~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~--------~~~p~-g~vP 51 (75)
T cd03080 1 MITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGLA--------KRSPK-GKLP 51 (75)
T ss_pred CEEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCcc--------cCCCC-CCCC
Confidence 37999997 689999999999999999998887653 57998 8999
No 100
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.65 E-value=4.1e-08 Score=62.25 Aligned_cols=44 Identities=25% Similarity=0.313 Sum_probs=36.3
Q ss_pred CCChhhHHHHHHHHHcCCceeEEEecCCC--CCChhhhhhCCCCCCCC
Q 045685 12 WANPFCLRAKIALAEKGVEYEARAENLFG--GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 12 ~~sp~~~~vr~~L~~~gi~~~~~~v~~~~--~~~~~~~~~~p~~g~vP 57 (199)
..||+|+|+|++|.++||+|+.+.++..+ ...+++ ++||. |+||
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~-~~vP 59 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGF-YTVP 59 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCC-ceeC
Confidence 57999999999999999999999998752 222344 78999 8999
No 101
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.61 E-value=6.2e-08 Score=59.72 Aligned_cols=53 Identities=23% Similarity=0.335 Sum_probs=44.7
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++++||+.+.||+|++++.+|..+||+|+.+.++-.....+++.++++. +++|
T Consensus 1 ~~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~-~~vP 53 (73)
T cd03027 1 GRVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGS-SVVP 53 (73)
T ss_pred CEEEEEecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCC-CCcC
Confidence 3689999999999999999999999999998876531335567888888 7899
No 102
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.61 E-value=7.9e-08 Score=60.67 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=41.1
Q ss_pred EEEccCCChhhHHHHHHHHHcCCceeEEEecCCC-C--CChhhhh-----hCCCCCCCCCC
Q 045685 7 VLLDCWANPFCLRAKIALAEKGVEYEARAENLFG-G--KSDLLLK-----SNPINKKVPTW 59 (199)
Q Consensus 7 ~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~-~--~~~~~~~-----~~p~~g~vP~~ 59 (199)
+||++..++.|+++|++|.++||+|+.+.+++.+ . +.+++.+ .+|. |+||..
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~-g~vP~L 61 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDF-PNLPYY 61 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcC-CCCCEE
Confidence 7999999999999999999999999999999862 1 1234432 2288 899933
No 103
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.61 E-value=8.7e-08 Score=60.03 Aligned_cols=50 Identities=24% Similarity=0.141 Sum_probs=40.0
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhC-----CCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSN-----PINKKVPTW 59 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~-----p~~g~vP~~ 59 (199)
+++||+++.|++|++++++|+++|++|+.+.++.. +++.+.+ |. |+||..
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~----~~~~~~~~~~~~~~-g~vP~L 55 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA----EDLEKLKKDGSLMF-QQVPMV 55 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH----HHHHhhccccCCCC-CCCCEE
Confidence 46899999999999999999999999999988753 2333333 56 899933
No 104
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.60 E-value=9.3e-08 Score=58.73 Aligned_cols=43 Identities=26% Similarity=0.364 Sum_probs=37.4
Q ss_pred EEEEccC-------CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCW-------ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~-------~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++||.++ .||+|++++++|+++||+|+.+.++.. . .+|. |+||
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~-~-------~~p~-g~vP 50 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP-W-------RSPT-GKLP 50 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc-c-------cCCC-cccC
Confidence 4677776 899999999999999999999998765 2 7898 8999
No 105
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.48 E-value=3.3e-07 Score=57.35 Aligned_cols=52 Identities=29% Similarity=0.392 Sum_probs=43.6
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++++||+.++||+|.+++.+|...||+|+.+.++-. .....+.+.+.. .+||
T Consensus 8 ~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~-~~~~~~~~~~g~-~~vP 59 (79)
T TIGR02190 8 ESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND-ARGRSLRAVTGA-TTVP 59 (79)
T ss_pred CCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC-hHHHHHHHHHCC-CCcC
Confidence 679999999999999999999999999999887654 444556666676 6898
No 106
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.46 E-value=4e-07 Score=57.23 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=40.9
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+.+.||+|.+++-+|..+||+|+.+.++-. .......+.++. ..||
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~-~~~~~~~~~~g~-~~vP 52 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRV-PEAAETLRAQGF-RQLP 52 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHcCC-CCcC
Confidence 58999999999999999999999999999988754 322222344676 7999
No 107
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.37 E-value=6.3e-07 Score=54.70 Aligned_cols=52 Identities=25% Similarity=0.308 Sum_probs=44.0
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+++|+.++||+|.+++.+|.++|++|+.+.++......+++.+.+|. ++||
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~-~~vP 52 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGY-RSVP 52 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCC-cccC
Confidence 479999999999999999999999999988887541334567788898 8999
No 108
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.33 E-value=2.9e-05 Score=59.73 Aligned_cols=149 Identities=17% Similarity=0.141 Sum_probs=99.6
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC---------------------CCCC-CCCCCC-CH
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP---------------------TWPS-PPLLPS-RA 69 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP---------------------~~~~-~~l~p~-~~ 69 (199)
.++-|.++.+.+...+-|.+++..+.. | .+|. |++| +... ..+=+. ..
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ssN~-----~---~s~s-g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~ 86 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSSNP-----W---RSPS-GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSA 86 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeecCC-----C---CCCC-CCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHH
Confidence 488999999999999955554444322 1 3666 7888 0000 001111 24
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHhcc-------------------------------------------CCcchhHHHH
Q 045685 70 YGTAKTRFWADFIDKKVFDAVCNIRKS-------------------------------------------KGEVPETAKN 106 (199)
Q Consensus 70 ~~~a~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~ 106 (199)
.+++....|..++...+.+.+...+.- ..+..++...
T Consensus 87 kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~ 166 (313)
T KOG3028|consen 87 KQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYK 166 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHH
Confidence 567778888888888777765432210 0112345566
Q ss_pred HHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccc---cccCccHHHHHHHHhc
Q 045685 107 EFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKV---ENECPKFSAWMNKCMQ 171 (199)
Q Consensus 107 ~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~ 171 (199)
...+++..+...||+.+|++||++|--|+.++..+..+..++ .....+ ...+++|.+|.+++.+
T Consensus 167 ~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~-Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 167 DASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVA-LPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhcc-CCchhHHHHHHhcchHHHHHHHHHH
Confidence 678899999999999999999999999999999998644432 111111 3459999999999876
No 109
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.31 E-value=1.9e-06 Score=52.86 Aligned_cols=51 Identities=33% Similarity=0.376 Sum_probs=41.3
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+.+.||+|.+++.+|...|++|+.+.++-. .....+.+.... .+||
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~-~~~~~~~~~~g~-~~vP 52 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKD-ITGRSLRAVTGA-MTVP 52 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCC-hhHHHHHHHhCC-CCcC
Confidence 68999999999999999999999999999888765 433344455555 5888
No 110
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.26 E-value=1.7e-06 Score=53.07 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=39.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++||+.+.||+|++++-+|..+||+|+.+.++-. .......+..+. ..||
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~-~~~~~~~~~~g~-~~vP 50 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQ-PEAIDYVKAQGF-RQVP 50 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHcCC-cccC
Confidence 5899999999999999999999999999888754 333333334455 5898
No 111
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.13 E-value=4e-06 Score=51.17 Aligned_cols=52 Identities=25% Similarity=0.253 Sum_probs=41.8
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+.++||+|++++.+|..+|++|+.+.++-.....+++.+.++. +.||
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~-~~vP 52 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQ-RGVP 52 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCC-Cccc
Confidence 489999999999999999999999999887776431123456677887 7899
No 112
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=98.12 E-value=2.5e-05 Score=53.42 Aligned_cols=68 Identities=22% Similarity=0.338 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhh
Q 045685 101 PETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTV 175 (199)
Q Consensus 101 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 175 (199)
.++..+++...|..+|..+.......| ++|+.||.++|.|+.+..++ +..++ |+|.+|+++|.+.-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk---gi~~P---~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK---GIQWP---PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT---TS------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc---CCcCC---HHHHHHHHHHHHHcCC
Confidence 356677788888888888875555555 89999999999999888864 56665 8999999999876544
No 113
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.12 E-value=6e-06 Score=50.04 Aligned_cols=52 Identities=29% Similarity=0.341 Sum_probs=42.4
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+++|+.+.||+|++++.+|..++++|+.+.++-..+..+++.++++. .++|
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~-~~~P 52 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGW-PTVP 52 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCC-CCcC
Confidence 378999999999999999999999999987776541234566777887 7888
No 114
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.09 E-value=1e-05 Score=50.65 Aligned_cols=51 Identities=29% Similarity=0.418 Sum_probs=42.0
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCC--CChhhhh-hCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGG--KSDLLLK-SNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~--~~~~~~~-~~p~~g~vP 57 (199)
.+++|+.+.||||.++.-+|..+|++|+.+.++.. . ...+..+ .++. .+||
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~-~~~~~~~~~~~~~g~-~tvP 55 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDD-EPEEAREMVKRGKGQ-RTVP 55 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCC-cHHHHHHHHHHhCCC-CCcC
Confidence 58999999999999999999999999999999876 4 3334434 4466 6999
No 115
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.07 E-value=7.2e-06 Score=50.66 Aligned_cols=52 Identities=19% Similarity=0.218 Sum_probs=41.4
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhC-CCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSN-PINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~-p~~g~vP 57 (199)
+++||+..+||+|++++.+|...|++|+.+.++-.....+.+.+++ +. ..||
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~-~~vP 53 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGN-MTVP 53 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCC-ceeC
Confidence 4799999999999999999999999999877764312234556666 77 7999
No 116
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.05 E-value=7e-06 Score=50.57 Aligned_cols=53 Identities=26% Similarity=0.384 Sum_probs=38.6
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+.+.||+|.+++-+|..+||+|+.+.++...+..+++.+.......||
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP 53 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVP 53 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccC
Confidence 48999999999999999999999999998888653111223333344312788
No 117
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.96 E-value=7.4e-06 Score=48.27 Aligned_cols=51 Identities=29% Similarity=0.404 Sum_probs=38.5
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++|+.+.||+|.+++-+|..+|++|+.+.++......+++.+.... .++|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~-~~~P 51 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGV-RTVP 51 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSS-SSSS
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCC-CccC
Confidence 58999999999999999999999999999987651123333444444 4666
No 118
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.94 E-value=7.5e-05 Score=50.67 Aligned_cols=67 Identities=15% Similarity=0.241 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhh
Q 045685 102 ETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTV 175 (199)
Q Consensus 102 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 175 (199)
.+..+++...|..++..+...... +..+|+.|+.++|.|+.+..++ +..++ |+|..|+++|.+.-.+
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vk---gi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEAV-NGQLSTDDIILFPILRNLTLVK---GLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhc---CCCCC---HHHHHHHHHHHHHhCC
Confidence 466777888888888888544444 4469999999999999888864 56665 8899999999876544
No 119
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.92 E-value=3.8e-05 Score=50.16 Aligned_cols=61 Identities=20% Similarity=0.157 Sum_probs=45.0
Q ss_pred CCcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCCh----hhhhhCCCCCCCC-CCCCCCCC
Q 045685 3 KGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSD----LLLKSNPINKKVP-TWPSPPLL 65 (199)
Q Consensus 3 ~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~----~~~~~~p~~g~vP-~~~~~~l~ 65 (199)
++.+++|+-++||||.+++-+|...|++|+.+.++-. .... .+.+.+.. .+|| .+-+...+
T Consensus 7 ~~~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~-~~~~~~~~~l~~~tg~-~tvP~Vfi~g~~i 72 (99)
T TIGR02189 7 EKAVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKE-PAGKDIENALSRLGCS-PAVPAVFVGGKLV 72 (99)
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCC-ccHHHHHHHHHHhcCC-CCcCeEEECCEEE
Confidence 3679999999999999999999999999999888754 3222 23444555 5888 34333333
No 120
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=97.90 E-value=1.6e-05 Score=49.57 Aligned_cols=51 Identities=25% Similarity=0.351 Sum_probs=39.8
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++|+.+.||+|.+++-+|+.+|++|+.+.++......+++.+.... ..||
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~-~~vP 51 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGR-RTVP 51 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCC-CCcC
Confidence 57999999999999999999999999999887541123344555555 5788
No 121
>PHA03050 glutaredoxin; Provisional
Probab=97.80 E-value=7.6e-05 Score=49.51 Aligned_cols=53 Identities=23% Similarity=0.285 Sum_probs=42.5
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCC---ceeEEEecCCC---CCChhhhhhCCCCCCCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGV---EYEARAENLFG---GKSDLLLKSNPINKKVP 57 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi---~~~~~~v~~~~---~~~~~~~~~~p~~g~vP 57 (199)
+++++|+.++||||.+++-+|...|+ +|+.+.++-.. ...+++.+.+.. .+||
T Consensus 13 ~~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~-~tVP 71 (108)
T PHA03050 13 NKVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG-RTVP 71 (108)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCC-CCcC
Confidence 68999999999999999999999999 78888887531 113456667776 5899
No 122
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.54 E-value=0.00015 Score=47.11 Aligned_cols=53 Identities=19% Similarity=0.031 Sum_probs=38.9
Q ss_pred CcEEEEcc-----CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 4 GAVVLLDC-----WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 4 ~~~~Ly~~-----~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++.+|.- +.||||.+++-+|..+||+|+.+.++-.......+.+.+.. .+||
T Consensus 12 ~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~-~tvP 69 (97)
T TIGR00365 12 NPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNW-PTIP 69 (97)
T ss_pred CCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCC-CCCC
Confidence 67889964 89999999999999999999987774320112234455655 5888
No 123
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=97.49 E-value=0.00039 Score=43.35 Aligned_cols=51 Identities=27% Similarity=0.345 Sum_probs=40.0
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCCh----hhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSD----LLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~----~~~~~~p~~g~vP 57 (199)
++++|+.+.||+|.+++-+|...+++|+.+.++.. .... .+.+.+.. ..+|
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~g~-~~~P 55 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQH-EDGSEIQDYLQELTGQ-RTVP 55 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCC-CChHHHHHHHHHHhCC-CCCC
Confidence 37899999999999999999999999999998875 4322 23445554 4677
No 124
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=97.42 E-value=0.0002 Score=47.81 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
++||+.+.||+|++++-+|..+|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 589999999999999999999999999887754
No 125
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=97.41 E-value=0.00027 Score=48.61 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=30.5
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
++++|+.+.||+|++++-+|..+||+|+.+.+.
T Consensus 1 mi~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 1 MVTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 379999999999999999999999999988774
No 126
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=97.33 E-value=0.00055 Score=45.95 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=30.3
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
++++|+.+.|+.|++++-+|..+||+|+.+.+.
T Consensus 1 mi~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 1 MIKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 378999999999999999999999999988764
No 127
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=97.33 E-value=0.00033 Score=46.21 Aligned_cols=33 Identities=21% Similarity=0.122 Sum_probs=30.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
+++|+.+.||+|++++-+|..+||+|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYLK 33 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence 579999999999999999999999999888753
No 128
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.26 E-value=0.00053 Score=43.89 Aligned_cols=53 Identities=17% Similarity=0.040 Sum_probs=39.6
Q ss_pred CcEEEEcc-----CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 4 GAVVLLDC-----WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 4 ~~~~Ly~~-----~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+.+++|.. ++||||.+++-+|...|++|+.+.++-......++.+.+.. .+||
T Consensus 8 ~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~-~tvP 65 (90)
T cd03028 8 NPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNW-PTFP 65 (90)
T ss_pred CCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCC-CCCC
Confidence 56888864 69999999999999999999999876431223344455555 5788
No 129
>PRK12559 transcriptional regulator Spx; Provisional
Probab=97.21 E-value=0.001 Score=45.72 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=31.1
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
++++|+.+.|+.|++++-+|..+||+|+.+.+.-
T Consensus 1 mi~iY~~~~C~~crkA~~~L~~~gi~~~~~di~~ 34 (131)
T PRK12559 1 MVVLYTTASCASCRKAKAWLEENQIDYTEKNIVS 34 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCeEEEEeeC
Confidence 3799999999999999999999999999887754
No 130
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=97.16 E-value=0.0012 Score=45.44 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=31.1
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
++++|+.+.|+.|++++-+|..+||+|+.+.+.-
T Consensus 1 Mi~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~~ 34 (132)
T PRK13344 1 MIKIYTISSCTSCKKAKTWLNAHQLSYKEQNLGK 34 (132)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 3789999999999999999999999999888753
No 131
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=97.15 E-value=0.00077 Score=41.39 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=29.8
Q ss_pred CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 12 WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 12 ~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+.+++|.|++++|++.|+||+.+.. . + . ...+|. |+||
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~--~-~-~---~~~~P~-GkVP 52 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCR--A-N-A---EFMSPS-GKVP 52 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEec--C-C-c---cccCCC-Cccc
Confidence 4688999999999999999998843 2 2 1 126787 9999
No 132
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=97.11 E-value=0.00098 Score=42.07 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=31.7
Q ss_pred cEEEEccCCChhhHHHHHHHHH-----cCCceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAE-----KGVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~-----~gi~~~~~~v~~~ 39 (199)
++++|+.+.||+|.+++-+|.. .|++|+.+.++-.
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~ 41 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAE 41 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCC
Confidence 5999999999999999999999 8999998888753
No 133
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.09 E-value=0.0012 Score=54.14 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=32.7
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
++++|+.+.||+|.++.-+|..+||+|+.+.++-.
T Consensus 3 ~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~ 37 (410)
T PRK12759 3 EVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDD 37 (410)
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCC
Confidence 79999999999999999999999999999888743
No 134
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.07 E-value=0.0019 Score=40.28 Aligned_cols=50 Identities=28% Similarity=0.391 Sum_probs=38.0
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCc--eeEEEecCCCCCChh----hhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVE--YEARAENLFGGKSDL----LLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~--~~~~~v~~~~~~~~~----~~~~~p~~g~vP 57 (199)
+++|+.++||+|.+++-+|...+++ |+.+.++.. ..... +.+.... ..+|
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~-~~~~~~~~~l~~~~g~-~~vP 56 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQL-SNGSEIQDYLEEITGQ-RTVP 56 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCC-CChHHHHHHHHHHhCC-CCCC
Confidence 4789999999999999999999999 888888765 33222 3444454 4788
No 135
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=97.06 E-value=0.00089 Score=45.06 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=29.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
+++|+.+.||+|++++-+|..+||+|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 47999999999999999999999999977764
No 136
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.03 E-value=0.0015 Score=39.99 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=29.0
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.||+|.++.+.|+..|++|+.+...-. ..+|. |++|
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n~--------~~sp~-gkLP 50 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNNP--------WRSPT-GKLP 50 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCCC--------CCCCC-CccC
Confidence 579999999999999999987754321 24787 8999
No 137
>PRK10026 arsenate reductase; Provisional
Probab=96.97 E-value=0.0016 Score=45.24 Aligned_cols=35 Identities=14% Similarity=-0.033 Sum_probs=32.1
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
|+ ++++|+++.|.-|++++-+|..+|++|+++.+-
T Consensus 1 m~--~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 1 MS--NITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CC--EEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 55 799999999999999999999999999988764
No 138
>PRK10824 glutaredoxin-4; Provisional
Probab=96.87 E-value=0.002 Score=43.06 Aligned_cols=63 Identities=17% Similarity=0.093 Sum_probs=44.3
Q ss_pred CcEEEEcc-----CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC-CCCCCCCCCC
Q 045685 4 GAVVLLDC-----WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP-TWPSPPLLPS 67 (199)
Q Consensus 4 ~~~~Ly~~-----~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP-~~~~~~l~p~ 67 (199)
+.+.+|.- +.||||.++.-+|...|++|+.+.++-.......+.+.+-. .+|| .|-+..+.+.
T Consensus 15 ~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~-~TVPQIFI~G~~IGG 83 (115)
T PRK10824 15 NPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANW-PTFPQLWVDGELVGG 83 (115)
T ss_pred CCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCC-CCCCeEEECCEEEcC
Confidence 56888864 58999999999999999999988775431223344555665 5898 4545555553
No 139
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=96.86 E-value=0.0027 Score=41.84 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=29.6
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
+++|+.+.|+.|++++-+|..+|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999987764
No 140
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=96.75 E-value=0.0041 Score=41.58 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=29.9
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
.++||+.+.|+-|++++-+|..+|++|+.+.+-
T Consensus 1 ~i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 1 DIIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 378999999999999999999999999977664
No 141
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=96.58 E-value=0.0042 Score=39.30 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=27.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcC-----CceeEEEecC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKG-----VEYEARAENL 38 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~g-----i~~~~~~v~~ 38 (199)
+++|+.++||+|.+++-+|..++ ++|+.+.++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~ 39 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHA 39 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCC
Confidence 68999999999999999999985 5566666553
No 142
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=96.52 E-value=0.0085 Score=40.25 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.5
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
++++|+++.|.-|++++-.|+.+||+|+.+.+-
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 599999999999999999999999999977664
No 143
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=96.44 E-value=0.0054 Score=42.92 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=31.4
Q ss_pred cEEEEccC------CChhhHHHHHHHHHcCCceeEEEecCC
Q 045685 5 AVVLLDCW------ANPFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~------~sp~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
+++||... .+|+|.+++-+|+.++|+|+.+.++..
T Consensus 1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~ 41 (147)
T cd03031 1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMD 41 (147)
T ss_pred CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCC
Confidence 47899988 899999999999999999998888764
No 144
>PRK10853 putative reductase; Provisional
Probab=96.36 E-value=0.0066 Score=40.90 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=29.3
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEe
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAE 36 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v 36 (199)
++++|+++.|.-|++++-+|..+|++|+.+.+
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~ 32 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFHDY 32 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEeeh
Confidence 37999999999999999999999999997765
No 145
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=96.08 E-value=0.019 Score=39.17 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.2
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
.+++|+++.|.-|++++-+|.++||+|+.+.+-
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 589999999999999999999999999977653
No 146
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=95.94 E-value=0.0051 Score=51.11 Aligned_cols=85 Identities=15% Similarity=0.275 Sum_probs=59.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHH
Q 045685 62 PPLLPSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLT 141 (199)
Q Consensus 62 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 141 (199)
+.+++.+ .++..++.|.++... .....+...+..++..|.-..||+|.++|.||+++|+.+
T Consensus 66 ~~lf~~~-~d~~~vd~w~~~s~~------------------~~~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l 126 (712)
T KOG1147|consen 66 PKLFGNN-IDRSQVDHWVSFSST------------------FSFDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGAL 126 (712)
T ss_pred HhHcCCc-ccHHHHHHHHHHhhh------------------cchHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHH
Confidence 4577766 678888888887654 123456667777888887788999999999999999988
Q ss_pred HHHHHhHhhcCccccccCccHHHHHH
Q 045685 142 CWFYAVEKFGGVKVENECPKFSAWMN 167 (199)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~p~l~~~~~ 167 (199)
..-....+ .......+-+|.+|++
T Consensus 127 ~~n~~~~~--~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 127 HSNGMRQE--QLKAKKDYQNVERWYD 150 (712)
T ss_pred hcccchHH--HHHhhCCchhhhhhcC
Confidence 63211100 1111245678888988
No 147
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=95.80 E-value=0.015 Score=38.73 Aligned_cols=31 Identities=19% Similarity=0.069 Sum_probs=28.7
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEe
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAE 36 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v 36 (199)
+++|+++.|.-|++++-.|..+|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 5899999999999999999999999997765
No 148
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=95.74 E-value=0.017 Score=38.68 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=29.0
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
+++|+.+.|+-|++++-.|..+|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999976653
No 149
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.63 E-value=0.019 Score=34.78 Aligned_cols=37 Identities=24% Similarity=0.161 Sum_probs=33.2
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCC
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
|+ +.+||+...||-|....-.|+-.+++|+.+++.-.
T Consensus 1 ms--kp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~S 37 (85)
T COG4545 1 MS--KPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITES 37 (85)
T ss_pred CC--CceeeccccCcchHHHHHHHHHcCCCceeeehhhh
Confidence 55 78999999999999999999999999999987643
No 150
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=95.41 E-value=0.045 Score=32.47 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=24.8
Q ss_pred cEEEEccCCChhhHHHHHHHHHc-----CCceeEEEe
Q 045685 5 AVVLLDCWANPFCLRAKIALAEK-----GVEYEARAE 36 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~~~~~v 36 (199)
++++|+.++||+|.++.-+|.+. ++++..+.+
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~ 38 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDA 38 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEc
Confidence 57899999999999999888865 455554443
No 151
>PTZ00062 glutaredoxin; Provisional
Probab=95.22 E-value=0.038 Score=40.90 Aligned_cols=62 Identities=16% Similarity=0.042 Sum_probs=41.3
Q ss_pred CcEEEEcc-----CCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC-CCCCCCCCC
Q 045685 4 GAVVLLDC-----WANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP-TWPSPPLLP 66 (199)
Q Consensus 4 ~~~~Ly~~-----~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP-~~~~~~l~p 66 (199)
+.+.||.- |.||||.++.-+|...||+|+...++-.....+.+.+.+.. ..|| .|-+..+++
T Consensus 113 ~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~-~TvPqVfI~G~~IG 180 (204)
T PTZ00062 113 HKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNW-PTYPQLYVNGELIG 180 (204)
T ss_pred CCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCC-CCCCeEEECCEEEc
Confidence 56788854 68999999999999999999977765331122334455555 5788 333333333
No 152
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=94.51 E-value=0.1 Score=34.20 Aligned_cols=62 Identities=21% Similarity=0.285 Sum_probs=46.4
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhh----hhhCCCCCCCC-CCCCCCCCCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLL----LKSNPINKKVP-TWPSPPLLPS 67 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~----~~~~p~~g~vP-~~~~~~l~p~ 67 (199)
+.++.|+=.+||||.++.-+|...|+++..+++|-. ....++ .++.-. .+|| .|-+..+++.
T Consensus 14 ~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~-~~g~eiq~~l~~~tg~-~tvP~vFI~Gk~iGG 80 (104)
T KOG1752|consen 14 NPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDED-EDGSEIQKALKKLTGQ-RTVPNVFIGGKFIGG 80 (104)
T ss_pred CCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCC-CCcHHHHHHHHHhcCC-CCCCEEEECCEEEcC
Confidence 678889989999999999999999999999999987 444444 333444 4888 4545555553
No 153
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=94.05 E-value=0.12 Score=37.18 Aligned_cols=38 Identities=32% Similarity=0.392 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhhCCC---CccccCC-CChhHHHHHhHHHHHH
Q 045685 108 FIEILKQLEGALGEK---DFFGGDS-FGFVHVIAIPLTCWFY 145 (199)
Q Consensus 108 ~~~~l~~le~~L~~~---~~l~G~~-~t~aD~~l~~~l~~~~ 145 (199)
..+.+..+++.|++. .|+.|++ +|-+||.+++.|.-+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 456788899999887 9999977 9999999999887443
No 154
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=92.92 E-value=0.25 Score=27.73 Aligned_cols=50 Identities=32% Similarity=0.365 Sum_probs=30.7
Q ss_pred EEEEccCCChhhHHHHHHHH-----HcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALA-----EKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++|+..+||+|++++..+. ..++.+..+.++-. ..........+. +.+|
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~P 55 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDED-PALEKELKRYGV-GGVP 55 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCC-hHHhhHHHhCCC-cccc
Confidence 35677789999999999999 44555555555433 222111134555 5676
No 155
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=92.67 E-value=0.44 Score=29.57 Aligned_cols=49 Identities=20% Similarity=0.272 Sum_probs=35.4
Q ss_pred cEEEEccCCChhhHHHHHHHHHcC--CceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKG--VEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~g--i~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++||+-+.|+.|..+.-.|.... .+++...+|.. ..++++.+-. -.||
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~-~d~~l~~~Y~---~~IP 51 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDID-EDPELFEKYG---YRIP 51 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETT-TTHHHHHHSC---TSTS
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECC-CCHHHHHHhc---CCCC
Confidence 479999999999999999999654 56778888886 5555444433 2688
No 156
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=91.63 E-value=0.25 Score=32.71 Aligned_cols=29 Identities=28% Similarity=0.257 Sum_probs=22.2
Q ss_pred EccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 9 LDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 9 y~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
|+.+.|.-|++++-+|..+|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999976653
No 157
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=91.27 E-value=0.87 Score=27.78 Aligned_cols=50 Identities=24% Similarity=0.287 Sum_probs=32.8
Q ss_pred cEEEEccCCChhhHHHHHHHHH----cCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAE----KGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~----~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++++|+.++||+|..+.-.|.. .+..+....+|.. +.. +..+.... ..+|
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~-~~~-~~~~~~~v-~~vP 55 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVM-ENP-QKAMEYGI-MAVP 55 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCc-cCH-HHHHHcCC-ccCC
Confidence 5789999999999988888764 3444666677765 333 33333333 3577
No 158
>PHA02125 thioredoxin-like protein
Probab=90.78 E-value=0.68 Score=28.17 Aligned_cols=47 Identities=23% Similarity=0.200 Sum_probs=32.1
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+++|+.++||.|+.+.-.|+ ++.++...+|.. . ..+..+.... ..+|
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~-~-~~~l~~~~~v-~~~P 48 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTD-E-GVELTAKHHI-RSLP 48 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEEeeeCC-C-CHHHHHHcCC-ceeC
Confidence 78899999999999988776 456777777754 3 3344444443 3677
No 159
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=89.39 E-value=0.92 Score=29.04 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=27.2
Q ss_pred EEEEccCCC------hhhHHHHHHHHHcCCceeEEEecCC
Q 045685 6 VVLLDCWAN------PFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 6 ~~Ly~~~~s------p~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
+++|....+ -.|++++.+|..+||+|+.+.++.+
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d 41 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMN 41 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCC
Confidence 577765443 3678899999999999999998865
No 160
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=88.57 E-value=1.7 Score=28.14 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=26.0
Q ss_pred CcEEEEc-----cCCChhhHHHHHHHHHcC-CceeEEEe
Q 045685 4 GAVVLLD-----CWANPFCLRAKIALAEKG-VEYEARAE 36 (199)
Q Consensus 4 ~~~~Ly~-----~~~sp~~~~vr~~L~~~g-i~~~~~~v 36 (199)
+.+.||- +|.|+||.++--+|...| ++|..+.|
T Consensus 15 n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnV 53 (105)
T COG0278 15 NPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDV 53 (105)
T ss_pred CceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEee
Confidence 5677874 689999999999999999 55554444
No 161
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=87.58 E-value=1.4 Score=26.91 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=25.6
Q ss_pred EEEEccCCChhhHHH----HHHHHHcCCceeEEEec
Q 045685 6 VVLLDCWANPFCLRA----KIALAEKGVEYEARAEN 37 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~v----r~~L~~~gi~~~~~~v~ 37 (199)
+.+|. ++||.|..+ .-++.+.|+.++.+.++
T Consensus 3 i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~ 37 (76)
T TIGR00412 3 IQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVT 37 (76)
T ss_pred EEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 67777 899999998 66777888888887776
No 162
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=83.86 E-value=0.88 Score=34.08 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=45.8
Q ss_pred HHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHhcchhhh
Q 045685 109 IEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCMQRDTVA 176 (199)
Q Consensus 109 ~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 176 (199)
.+.+..++..|.+..|+.|.+++-+|+.++..+. ..+....+++..+|++.+.+.-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~---------~ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG---------VEPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc---------cCcchhhhhHHHHHHHHHHHHHHHH
Confidence 5678889999999999999999999999987662 1222356788889998887765554
No 163
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=82.48 E-value=2.1 Score=27.08 Aligned_cols=32 Identities=16% Similarity=0.000 Sum_probs=23.5
Q ss_pred cEEEEccCCChhhHHHHHHHHHc-----CCceeEEEe
Q 045685 5 AVVLLDCWANPFCLRAKIALAEK-----GVEYEARAE 36 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~~~~~v 36 (199)
++.+|..++||+|..+.-++... ++.++.+.+
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~ 51 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDG 51 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEh
Confidence 58889999999999988877755 344444443
No 164
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=79.40 E-value=4 Score=26.52 Aligned_cols=34 Identities=12% Similarity=0.025 Sum_probs=23.6
Q ss_pred EEEEccCCCh------hhHHHHHHHHHcCCceeEEEecCC
Q 045685 6 VVLLDCWANP------FCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 6 ~~Ly~~~~sp------~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
+++|....++ ..+++..+|..++|+|+.+.+...
T Consensus 3 I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~ 42 (99)
T PF04908_consen 3 IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMD 42 (99)
T ss_dssp EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCC
Confidence 7888765443 567999999999999998877764
No 165
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=78.74 E-value=5.6 Score=24.10 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=29.0
Q ss_pred CChhhHHHHHHHHHcCCc---eeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 13 ANPFCLRAKIALAEKGVE---YEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+|-|..+.+.|+..+.+ |+++..+-. ..+|. |++|
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n~--------~~Spt-g~LP 51 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNNP--------WLSPT-GELP 51 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCCC--------CcCCC-CCCC
Confidence 589999999999999999 776665422 26888 8999
No 166
>PHA03075 glutaredoxin-like protein; Provisional
Probab=70.06 E-value=11 Score=25.15 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=32.4
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEecCC
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
..+.|+|=|.|+-|+-+.-+|.+..=.|+...|+..
T Consensus 3 ~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIl 38 (123)
T PHA03075 3 KTLILFGKPLCSVCESISEALKELEDEYDILRVNIL 38 (123)
T ss_pred ceEEEeCCcccHHHHHHHHHHHHhhccccEEEEEee
Confidence 578999999999999999999888889999988765
No 167
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=69.83 E-value=3.9 Score=23.76 Aligned_cols=22 Identities=27% Similarity=0.449 Sum_probs=17.9
Q ss_pred cEEEEccC----CChhhHHHHHHHHH
Q 045685 5 AVVLLDCW----ANPFCLRAKIALAE 26 (199)
Q Consensus 5 ~~~Ly~~~----~sp~~~~vr~~L~~ 26 (199)
+|+||.+- .|.||.||-.+|+.
T Consensus 2 ~mKLYRfiTGpDDssFChrvta~LN~ 27 (70)
T COG5515 2 KMKLYRFITGPDDSSFCHRVTAALNK 27 (70)
T ss_pred cceeeEeecCCchHHHHHHHHHHHhC
Confidence 48898773 57799999999985
No 168
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=62.92 E-value=16 Score=26.18 Aligned_cols=35 Identities=29% Similarity=0.292 Sum_probs=26.5
Q ss_pred cEEEEccCCChhhHHH----HHHHHHc-CCceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLRA----KIALAEK-GVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~v----r~~L~~~-gi~~~~~~v~~~ 39 (199)
++++|....||||... +-++... ++.++..++.+.
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~ 40 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLR 40 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEeccccc
Confidence 3688888899999854 4444455 888888888875
No 169
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=61.84 E-value=17 Score=26.49 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=23.2
Q ss_pred cEEEEccCCChhhHHHHHHHHH--cCCceeEEEecC
Q 045685 5 AVVLLDCWANPFCLRAKIALAE--KGVEYEARAENL 38 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~--~gi~~~~~~v~~ 38 (199)
.+.+|..+.||||++..-.+.. .++.+....+..
T Consensus 80 ~i~~f~D~~Cp~C~~~~~~l~~~~~~v~v~~~~~p~ 115 (197)
T cd03020 80 VVYVFTDPDCPYCRKLEKELKPNADGVTVRIFPVPI 115 (197)
T ss_pred EEEEEECCCCccHHHHHHHHhhccCceEEEEEEcCc
Confidence 4667777899999999888874 344444444433
No 170
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=56.61 E-value=30 Score=22.72 Aligned_cols=49 Identities=14% Similarity=0.163 Sum_probs=28.6
Q ss_pred EEEE-ccCCChhhHHHHHHHHHcCCc---eeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLL-DCWANPFCLRAKIALAEKGVE---YEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly-~~~~sp~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
++++ +-++||+|+.++-+|....-. .+...++.. ..++..+.-.. ..+|
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d--~~~~l~~~~~v-~~vP 77 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFD--EDKEKAEKYGV-ERVP 77 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCC--cCHHHHHHcCC-CcCC
Confidence 4555 457999999888777754322 244455543 23444444444 4788
No 171
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=56.51 E-value=22 Score=21.41 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=21.0
Q ss_pred cEEEEccCCChhhHHHHH----HHHHcCCceeEEEe
Q 045685 5 AVVLLDCWANPFCLRAKI----ALAEKGVEYEARAE 36 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~----~L~~~gi~~~~~~v 36 (199)
++++ ..+.||+|.++.- ++...|+.++.+.+
T Consensus 2 ~I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~ 36 (76)
T PF13192_consen 2 KIKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDI 36 (76)
T ss_dssp EEEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEET
T ss_pred EEEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEc
Confidence 3677 4567999997665 44556777766665
No 172
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=56.04 E-value=25 Score=24.43 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=27.8
Q ss_pred CcEEEEccCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 4 GAVVLLDCWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 4 ~~~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
-+|+.|..|.|++|..=--.|+.+|..+..+..+
T Consensus 26 ~~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~ 59 (149)
T COG3019 26 TEMVVYKSPNCGCCDEWAQHMKANGFEVKVVETD 59 (149)
T ss_pred eeEEEEeCCCCccHHHHHHHHHhCCcEEEEeecC
Confidence 4689999999999988888888888877766554
No 173
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=53.74 E-value=32 Score=23.06 Aligned_cols=32 Identities=9% Similarity=0.157 Sum_probs=21.2
Q ss_pred EEEEccCCChhhHHHHHHHH----HcCCceeEEEec
Q 045685 6 VVLLDCWANPFCLRAKIALA----EKGVEYEARAEN 37 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~----~~gi~~~~~~v~ 37 (199)
+.-|+.++||+|+.+.=.|. ..++++-.+.++
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd 62 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSE 62 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECC
Confidence 55677899999998655444 344555555555
No 174
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=53.15 E-value=26 Score=25.79 Aligned_cols=35 Identities=11% Similarity=-0.090 Sum_probs=25.5
Q ss_pred cEEEEccCCChhhHH----HHHHHHHcCCceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLR----AKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~----vr~~L~~~gi~~~~~~v~~~ 39 (199)
++.+|+-..||||.- ++-++...+++++..++.+.
T Consensus 2 ~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L~ 40 (209)
T cd03021 2 KIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFLG 40 (209)
T ss_pred ceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeehh
Confidence 678899889999974 44455566777777777654
No 175
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=52.89 E-value=17 Score=23.42 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=19.7
Q ss_pred EEEEccCCChhhHHHHHHHHH-----cCC--ceeEEEecCC
Q 045685 6 VVLLDCWANPFCLRAKIALAE-----KGV--EYEARAENLF 39 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~-----~gi--~~~~~~v~~~ 39 (199)
+.+|+.++||+|++..-.+.. ..+ .+..+.++..
T Consensus 9 v~~F~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (112)
T PF13098_consen 9 VVVFTDPWCPYCKKLEKELFPDNDVARYLKDDFQVIFVNID 49 (112)
T ss_dssp EEEEE-TT-HHHHHHHHHHHHHHHHHCEEHCECEEEECESH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence 556667899999988666552 112 3555566554
No 176
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=51.51 E-value=21 Score=21.79 Aligned_cols=22 Identities=18% Similarity=0.175 Sum_probs=17.1
Q ss_pred EEEEccCCChhhHHHHHHHHHc
Q 045685 6 VVLLDCWANPFCLRAKIALAEK 27 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~ 27 (199)
+.+|..+.||+|....-.+...
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 3577788999999887777654
No 177
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=49.78 E-value=29 Score=26.60 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=16.0
Q ss_pred EEEEccCCChhhHHHHHHHH
Q 045685 6 VVLLDCWANPFCLRAKIALA 25 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~ 25 (199)
+..|.-+.||||++..-.+.
T Consensus 121 I~vFtDp~CpyC~kl~~~l~ 140 (251)
T PRK11657 121 VYVFADPNCPYCKQFWQQAR 140 (251)
T ss_pred EEEEECCCChhHHHHHHHHH
Confidence 56667789999999977664
No 178
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=49.66 E-value=30 Score=26.16 Aligned_cols=22 Identities=5% Similarity=0.277 Sum_probs=17.5
Q ss_pred cEEEEccCCChhhHHHHHHHHH
Q 045685 5 AVVLLDCWANPFCLRAKIALAE 26 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~ 26 (199)
.+++|.-+.||||++..--+..
T Consensus 110 ~I~vFtDp~CpyCkkl~~~l~~ 131 (232)
T PRK10877 110 VITVFTDITCGYCHKLHEQMKD 131 (232)
T ss_pred EEEEEECCCChHHHHHHHHHHH
Confidence 3667778899999999776654
No 179
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=48.89 E-value=56 Score=19.39 Aligned_cols=22 Identities=23% Similarity=-0.041 Sum_probs=17.6
Q ss_pred cEEEEccCCChhhHHHHHHHHH
Q 045685 5 AVVLLDCWANPFCLRAKIALAE 26 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~ 26 (199)
-+..|+.++|+.|+...-.+..
T Consensus 13 ~ll~~~~~~C~~C~~~~~~~~~ 34 (93)
T cd02947 13 VVVDFWAPWCGPCKAIAPVLEE 34 (93)
T ss_pred EEEEEECCCChhHHHhhHHHHH
Confidence 3666777899999988877776
No 180
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=48.06 E-value=63 Score=20.45 Aligned_cols=33 Identities=12% Similarity=-0.076 Sum_probs=21.1
Q ss_pred EEEEccCCChhhHHHHHHH--------HHcCCceeEEEecCC
Q 045685 6 VVLLDCWANPFCLRAKIAL--------AEKGVEYEARAENLF 39 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L--------~~~gi~~~~~~v~~~ 39 (199)
+..|+.++|++|+...-.+ ...+ .+....+|..
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~ 55 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWT 55 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecC
Confidence 5667778999999876433 1222 4666666664
No 181
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=47.02 E-value=14 Score=31.55 Aligned_cols=50 Identities=14% Similarity=-0.064 Sum_probs=30.3
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCc---eeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVE---YEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+++|..+.||||..+.-+++...+. ++...+|.. . .+++.+.... ..||
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~-~-~~~~~~~~~v-~~VP 171 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDGA-L-FQDEVEARNI-MAVP 171 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEch-h-CHhHHHhcCC-cccC
Confidence 58899999999999887777654331 222233432 2 3344444444 4788
No 182
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=46.55 E-value=23 Score=26.63 Aligned_cols=34 Identities=18% Similarity=0.016 Sum_probs=27.8
Q ss_pred CcEEEEc-----cCCChhhHHHHHHHHHcCCceeEEEec
Q 045685 4 GAVVLLD-----CWANPFCLRAKIALAEKGVEYEARAEN 37 (199)
Q Consensus 4 ~~~~Ly~-----~~~sp~~~~vr~~L~~~gi~~~~~~v~ 37 (199)
..++||. .|.|+|++.+.-+|...|++|+...|-
T Consensus 139 ~~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL 177 (227)
T KOG0911|consen 139 KPVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVL 177 (227)
T ss_pred CeEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEecc
Confidence 3466663 678999999999999999998877664
No 183
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=45.51 E-value=26 Score=21.54 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=21.9
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecC
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
--+|++|+.-+|+..||+|+..+-..
T Consensus 14 evGF~rk~L~I~E~~~is~Eh~PSGI 39 (76)
T cd04911 14 EVGFGRKLLSILEDNGISYEHMPSGI 39 (76)
T ss_pred hhcHHHHHHHHHHHcCCCEeeecCCC
Confidence 35799999999999999999887443
No 184
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=45.44 E-value=14 Score=31.46 Aligned_cols=50 Identities=12% Similarity=-0.060 Sum_probs=30.7
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCCc---eeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGVE---YEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+++|..+.||||-.+.-+++...+. ++...+|.. ..+ ++.+.... ..||
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~-~~~-~~~~~~~v-~~VP 172 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGA-LFQ-DEVEALGI-QGVP 172 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEch-hCH-HHHHhcCC-cccC
Confidence 58899999999999988777665432 222234433 333 33343444 4798
No 185
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=40.90 E-value=55 Score=28.30 Aligned_cols=48 Identities=21% Similarity=0.173 Sum_probs=30.9
Q ss_pred cEEEEccCCChhhHHHHHHHH----Hc-CCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALA----EK-GVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~----~~-gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+++|..+.||+|..+.-+++ +. +|..+.+.+... ++..+.... ..||
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~----~~~~~~~~v-~~vP 531 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSHF----PDLKDEYGI-MSVP 531 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECccc----HHHHHhCCc-eecC
Confidence 478888899999988765444 34 677777666533 234333333 4788
No 186
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=39.71 E-value=67 Score=20.09 Aligned_cols=49 Identities=14% Similarity=0.051 Sum_probs=28.2
Q ss_pred EEEEccCCChhhHHHHHHHHHc----CCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEK----GVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~----gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+.+|+.++|+.|+...-.+... +-.+....+|.. .. +++.+..-. ..+|
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d-~~-~~l~~~~~v-~~vP 69 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDID-ED-QEIAEAAGI-MGTP 69 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC-CC-HHHHHHCCC-eecc
Confidence 5566778999999887777541 113555566664 33 233332223 3677
No 187
>PRK15371 effector protein YopJ; Provisional
Probab=39.48 E-value=1.3e+02 Score=23.75 Aligned_cols=66 Identities=12% Similarity=0.163 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHHhhhCCCCccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHh
Q 045685 102 ETAKNEFIEILKQLEGALGEKDFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCM 170 (199)
Q Consensus 102 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 170 (199)
+...+++..+++.||+.+.++.|+. +.++..|+-..|.+...... ..++.++ .-+..-...++.+.
T Consensus 22 ~~~~~~L~~~i~~le~~~~~G~~~~-~~~~~~Di~~lp~lv~~~N~-r~P~LNL-~~f~s~~~f~~aik 87 (287)
T PRK15371 22 EISNEELKNIITQLEDDIADGSWIH-KNYARTDLEVMPALVAQANN-KYPEMNL-KLVTSPLDLSIEIK 87 (287)
T ss_pred hhhHHHHHHHHHHHHHHHHcCCCCC-chhHHhhHHhhHHHHHHHhc-cCCCCCe-eecCCHHHHHHHHH
Confidence 3567889999999999999888884 45999999999988633221 3445555 33444445555544
No 188
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=38.90 E-value=1.4e+02 Score=22.99 Aligned_cols=49 Identities=16% Similarity=0.071 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHHhhhhchhhHHHHhccCCcchhHHHHHHHHHHHHHHhhh
Q 045685 66 PSRAYGTAKTRFWADFIDKKVFDAVCNIRKSKGEVPETAKNEFIEILKQLEGAL 119 (199)
Q Consensus 66 p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 119 (199)
|+|+...+++...+...-+-.+.....++ ..|.+++++..-+..||..|
T Consensus 23 prD~eAe~lI~~~~~~qP~A~Y~laQ~vl-----vQE~AL~~a~~ri~eLe~ql 71 (247)
T PF09849_consen 23 PRDPEAEALIAQALARQPDAPYYLAQTVL-----VQEQALKQAQARIQELEAQL 71 (247)
T ss_pred CCCHHHHHHHHHHHHhCCchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 56666555555544443333333333222 45677888888888888886
No 189
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=38.43 E-value=78 Score=23.44 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=29.9
Q ss_pred cEEEEccCCChhhHHHHHHHHHcCC---ceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEKGV---EYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~gi---~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
.+++|+.++||+|..+.-++....- ..+...+|.. ..++..+.... ..+|
T Consensus 136 ~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~--~~~~~~~~~~V-~~vP 188 (215)
T TIGR02187 136 RIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEAN--ENPDLAEKYGV-MSVP 188 (215)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCC--CCHHHHHHhCC-ccCC
Confidence 4677888999999998877775321 2333345553 23344343333 4677
No 190
>cd03024 DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=36.92 E-value=48 Score=23.95 Aligned_cols=34 Identities=32% Similarity=0.343 Sum_probs=21.4
Q ss_pred EEEEccCCChhhHHH----HHHHHHc----CCceeEEEecCC
Q 045685 6 VVLLDCWANPFCLRA----KIALAEK----GVEYEARAENLF 39 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~v----r~~L~~~----gi~~~~~~v~~~ 39 (199)
+.+|.-..||||.-. +-++... ++.++..++.+.
T Consensus 1 I~~~~D~~cP~cyl~~~~l~~~~~~~~~~~~~~v~~~p~~L~ 42 (201)
T cd03024 1 IDIWSDVVCPWCYIGKRRLEKALAELGDEVDVEIEWRPFELN 42 (201)
T ss_pred CeEEecCcCccHHHHHHHHHHHHHhCCCCCceEEEEeeeeeC
Confidence 357777899999844 4444444 566666665443
No 191
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=34.70 E-value=54 Score=23.38 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=21.3
Q ss_pred EEEEccCCChhhHHH----HHHHHHcCCceeEEEecC
Q 045685 6 VVLLDCWANPFCLRA----KIALAEKGVEYEARAENL 38 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~v----r~~L~~~gi~~~~~~v~~ 38 (199)
+.+|+-..||||.-. +-+....++.++..++.+
T Consensus 1 i~~~~D~~cP~cy~~~~~l~~~~~~~~~~i~~~p~~l 37 (192)
T cd03022 1 IDFYFDFSSPYSYLAHERLPALAARHGATVRYRPILL 37 (192)
T ss_pred CeEEEeCCChHHHHHHHHHHHHHHHhCCeeEEeeeeH
Confidence 356777899999864 333334566666666644
No 192
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=31.89 E-value=1.3e+02 Score=18.54 Aligned_cols=50 Identities=22% Similarity=0.105 Sum_probs=30.4
Q ss_pred cEEEEccCCChhhHHHHHHHHHc----CCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEK----GVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~----gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
-+..++.++|+.|+...=.+... +-++....+|.. . ...+.+.--. ..+|
T Consensus 20 vvv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~-~-~~~l~~~~~v-~~~P 73 (103)
T PF00085_consen 20 VVVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCD-E-NKELCKKYGV-KSVP 73 (103)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETT-T-SHHHHHHTTC-SSSS
T ss_pred EEEEEeCCCCCccccccceecccccccccccccchhhhh-c-cchhhhccCC-CCCC
Confidence 36667778999999887555432 115666667764 2 3344443444 4788
No 193
>cd03019 DsbA_DsbA DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.
Probab=30.90 E-value=63 Score=22.66 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=16.3
Q ss_pred cEEEEccCCChhhHHHHHHHH
Q 045685 5 AVVLLDCWANPFCLRAKIALA 25 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~ 25 (199)
.+..|..+.||+|.+..-.+.
T Consensus 18 ~i~~f~D~~Cp~C~~~~~~~~ 38 (178)
T cd03019 18 EVIEFFSYGCPHCYNFEPILE 38 (178)
T ss_pred EEEEEECCCCcchhhhhHHHH
Confidence 567777789999998866654
No 194
>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=30.66 E-value=1e+02 Score=22.00 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=21.3
Q ss_pred cEEEEccCCChhhHHHHHH----HHHc--CCceeEEEecC
Q 045685 5 AVVLLDCWANPFCLRAKIA----LAEK--GVEYEARAENL 38 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~----L~~~--gi~~~~~~v~~ 38 (199)
++.+|.-+.||||....-. .... +++++.....+
T Consensus 2 ~i~~~~D~~cp~c~~~~~~l~~l~~~~~~~~~v~~~~~~L 41 (193)
T cd03025 2 ELYYFIDPLCGWCYGFEPLLEKLKEEYGGGIEVELHLGGL 41 (193)
T ss_pred eEEEEECCCCchhhCchHHHHHHHHHhCCCceEEEEeccc
Confidence 4788888999999854333 3333 56666554433
No 195
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=30.43 E-value=87 Score=22.06 Aligned_cols=27 Identities=30% Similarity=0.412 Sum_probs=20.7
Q ss_pred CChhhHHHHHHHHHcCCceeEEEecCC
Q 045685 13 ANPFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 13 ~sp~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
.-+.+++++-.|++.|++|+.......
T Consensus 12 D~~~~~~a~~~L~~~gi~~~~~V~saH 38 (150)
T PF00731_consen 12 DLPIAEEAAKTLEEFGIPYEVRVASAH 38 (150)
T ss_dssp GHHHHHHHHHHHHHTT-EEEEEE--TT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecc
Confidence 457899999999999999998777654
No 196
>PF13462 Thioredoxin_4: Thioredoxin; PDB: 3FEU_A 3HZ8_A 3DVW_A 3A3T_E 3GMF_A 1Z6M_A 3GYK_C 3BCK_A 3BD2_A 3BCI_A ....
Probab=29.57 E-value=65 Score=22.12 Aligned_cols=21 Identities=19% Similarity=0.274 Sum_probs=16.0
Q ss_pred cEEEEccCCChhhHHHHHHHH
Q 045685 5 AVVLLDCWANPFCLRAKIALA 25 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~ 25 (199)
.++.|..+.||+|.+..-.+.
T Consensus 15 ~v~~f~d~~Cp~C~~~~~~~~ 35 (162)
T PF13462_consen 15 TVTEFFDFQCPHCAKFHEELE 35 (162)
T ss_dssp EEEEEE-TTSHHHHHHHHHHH
T ss_pred EEEEEECCCCHhHHHHHHHHh
Confidence 478888899999999866554
No 197
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=29.44 E-value=1.5e+02 Score=19.37 Aligned_cols=49 Identities=18% Similarity=0.004 Sum_probs=29.0
Q ss_pred EEEEccCCChhhHHHHHHHHHcCC---ceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGV---EYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi---~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+..|+.++|+-|+.+.-.+....- ......+|.. . .....+.... ..+|
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~-~-~~~l~~~~~v-~~vP 77 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAE-K-APFLVEKLNI-KVLP 77 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEcc-c-CHHHHHHCCC-ccCC
Confidence 455666899999988776654211 2355667664 2 3334444444 4788
No 198
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=28.97 E-value=53 Score=21.67 Aligned_cols=18 Identities=22% Similarity=0.421 Sum_probs=13.3
Q ss_pred cEEEEccCCChhhHHHHH
Q 045685 5 AVVLLDCWANPFCLRAKI 22 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~ 22 (199)
.+..|+.++||+|++..-
T Consensus 17 vlv~f~a~wC~~C~~~~~ 34 (125)
T cd02951 17 LLLLFSQPGCPYCDKLKR 34 (125)
T ss_pred EEEEEeCCCCHHHHHHHH
Confidence 355667789999998753
No 199
>cd03023 DsbA_Com1_like DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.
Probab=28.84 E-value=61 Score=21.88 Aligned_cols=21 Identities=14% Similarity=0.256 Sum_probs=15.7
Q ss_pred cEEEEccCCChhhHHHHHHHH
Q 045685 5 AVVLLDCWANPFCLRAKIALA 25 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~ 25 (199)
.++.|..+.||+|++..-.+.
T Consensus 8 ~i~~f~D~~Cp~C~~~~~~l~ 28 (154)
T cd03023 8 TIVEFFDYNCGYCKKLAPELE 28 (154)
T ss_pred EEEEEECCCChhHHHhhHHHH
Confidence 466777789999998865444
No 200
>COG4105 ComL DNA uptake lipoprotein [General function prediction only]
Probab=28.45 E-value=1.3e+02 Score=23.22 Aligned_cols=44 Identities=18% Similarity=0.267 Sum_probs=29.3
Q ss_pred EccCCChhhHHHHHHHHHc---CCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 9 LDCWANPFCLRAKIALAEK---GVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 9 y~~~~sp~~~~vr~~L~~~---gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
..+|.+|+++++.+.|... +-+|+.-.... ++|.+.+|.+..++
T Consensus 62 ~~~p~s~~~~qa~l~l~yA~Yk~~~y~~A~~~~-----drFi~lyP~~~n~d 108 (254)
T COG4105 62 SRHPFSPYSEQAQLDLAYAYYKNGEYDLALAYI-----DRFIRLYPTHPNAD 108 (254)
T ss_pred HcCCCCcccHHHHHHHHHHHHhcccHHHHHHHH-----HHHHHhCCCCCChh
Confidence 4578999999999888765 44454433333 37778888654454
No 201
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=27.57 E-value=1.8e+02 Score=18.81 Aligned_cols=49 Identities=10% Similarity=-0.004 Sum_probs=26.0
Q ss_pred EEEEccCCChhhHHHHHHHH-----HcCCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALA-----EKGVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+..++.++|+.|+...-.+. ..+.......++.. . .....+.... ..+|
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d-~-~~~l~~~~~V-~~~P 81 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAG-H-ERRLARKLGA-HSVP 81 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEecc-c-cHHHHHHcCC-ccCC
Confidence 55566789999986643332 22333455556654 2 2233333344 4677
No 202
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=26.72 E-value=44 Score=23.25 Aligned_cols=19 Identities=16% Similarity=0.450 Sum_probs=15.5
Q ss_pred CccHHHHHHHHhcchhhhc
Q 045685 159 CPKFSAWMNKCMQRDTVAR 177 (199)
Q Consensus 159 ~p~l~~~~~~~~~~p~~~~ 177 (199)
.-.|++|++|+..+|.+..
T Consensus 111 r~~LqrfL~RV~~hP~L~~ 129 (140)
T cd06891 111 KANLQRWFNRVCSDPILIR 129 (140)
T ss_pred HHHHHHHHHHHhCChhhcc
Confidence 4579999999999996543
No 203
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=25.98 E-value=43 Score=21.32 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=14.6
Q ss_pred CccccCCCChhHHHHHh
Q 045685 123 DFFGGDSFGFVHVIAIP 139 (199)
Q Consensus 123 ~~l~G~~~t~aD~~l~~ 139 (199)
..+.|..+++.|+.++.
T Consensus 71 ~lvLG~~F~w~Dll~Y~ 87 (91)
T PF10990_consen 71 RLVLGSTFDWWDLLAYA 87 (91)
T ss_pred HhhcCCCCCHHHHHHHH
Confidence 46889999999998875
No 204
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.25 E-value=1.1e+02 Score=18.57 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=25.1
Q ss_pred ChhHHHHHhHHHHHHHhHhhcCccc--cccCccHHHHHHHHhcc
Q 045685 131 GFVHVIAIPLTCWFYAVEKFGGVKV--ENECPKFSAWMNKCMQR 172 (199)
Q Consensus 131 t~aD~~l~~~l~~~~~~~~~~~~~~--~~~~p~l~~~~~~~~~~ 172 (199)
++--|-+...+.+++... ...++ ..+.|.|.+|++-+..+
T Consensus 28 GLDSiR~M~L~~~wR~~G--~~i~F~~La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 28 GLDSIRMMALLERWRKRG--ADIDFAQLAANPTLAAWWQLLSTR 69 (74)
T ss_pred chhHHHHHHHHHHHHHcC--CcccHHHHHhCccHHHHHHHHHhc
Confidence 444556666666665531 12222 57889999999988754
No 205
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=25.18 E-value=1.7e+02 Score=17.88 Aligned_cols=49 Identities=12% Similarity=-0.088 Sum_probs=29.3
Q ss_pred EEEEccCCChhhHHHHHHHHHc----CCceeEEEecCCCCCChhhhhhCCCCCCCC
Q 045685 6 VVLLDCWANPFCLRAKIALAEK----GVEYEARAENLFGGKSDLLLKSNPINKKVP 57 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~----gi~~~~~~v~~~~~~~~~~~~~~p~~g~vP 57 (199)
+..|+.++|+.|++..-.|... .-.+....+|.. ..++-..+.+. ..+|
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~-~~~~~~~~~~i--~~~P 70 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAE-ELPEISEKFEI--TAVP 70 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccc-cCHHHHHhcCC--cccc
Confidence 4556678999999887766542 334566666654 33333333444 3577
No 206
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=25.13 E-value=1.4e+02 Score=21.14 Aligned_cols=26 Identities=31% Similarity=0.331 Sum_probs=23.0
Q ss_pred ChhhHHHHHHHHHcCCceeEEEecCC
Q 045685 14 NPFCLRAKIALAEKGVEYEARAENLF 39 (199)
Q Consensus 14 sp~~~~vr~~L~~~gi~~~~~~v~~~ 39 (199)
-|.++++...|+..||+|+.......
T Consensus 11 ~~~~~~a~~~L~~~gi~~dv~V~SaH 36 (156)
T TIGR01162 11 LPTMKKAADILEEFGIPYELRVVSAH 36 (156)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECcc
Confidence 47889999999999999999988774
No 207
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=24.89 E-value=91 Score=18.05 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=18.8
Q ss_pred EEEccCCChhhHHHHHHHHHcCCceeEEEecC
Q 045685 7 VLLDCWANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 7 ~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
+||.+....-+..++-+|...||++....-..
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~~ 33 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEHM 33 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S---
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCcc
Confidence 57776555678899999999999988665443
No 208
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=24.77 E-value=1.6e+02 Score=17.48 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=25.1
Q ss_pred EEccCCChhhHHHHHHHHHcCCceeEEEecC
Q 045685 8 LLDCWANPFCLRAKIALAEKGVEYEARAENL 38 (199)
Q Consensus 8 Ly~~~~sp~~~~vr~~L~~~gi~~~~~~v~~ 38 (199)
+..|+....+.++.-+|...|++++.++++.
T Consensus 5 ~i~F~st~~a~~~ek~lk~~gi~~~liP~P~ 35 (73)
T PF11823_consen 5 LITFPSTHDAMKAEKLLKKNGIPVRLIPTPR 35 (73)
T ss_pred EEEECCHHHHHHHHHHHHHCCCcEEEeCCCh
Confidence 4455667789999999999999999887754
No 209
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.55 E-value=1.7e+02 Score=19.94 Aligned_cols=40 Identities=18% Similarity=0.061 Sum_probs=29.1
Q ss_pred CCChhhHHH----HHHHHHcCCceeEEEecCCCCCChhhhhhCCC
Q 045685 12 WANPFCLRA----KIALAEKGVEYEARAENLFGGKSDLLLKSNPI 52 (199)
Q Consensus 12 ~~sp~~~~v----r~~L~~~gi~~~~~~v~~~~~~~~~~~~~~p~ 52 (199)
.+||.|.++ +-+|.+..-+...+.++.. +++-|-..-||+
T Consensus 43 SWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG-~rp~Wk~p~n~F 86 (128)
T KOG3425|consen 43 SWCPDCVAAEPVINEALKHAPEDVHFVHVYVG-NRPYWKDPANPF 86 (128)
T ss_pred cCCchHHHhhHHHHHHHHhCCCceEEEEEEec-CCCcccCCCCcc
Confidence 489999865 5667777777788888777 777666556665
No 210
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=22.54 E-value=1.8e+02 Score=17.94 Aligned_cols=42 Identities=14% Similarity=0.366 Sum_probs=26.8
Q ss_pred CccccCCCChhHHHHHhHHHHHHHhHhhcCccccccCccHHHHHHHHh
Q 045685 123 DFFGGDSFGFVHVIAIPLTCWFYAVEKFGGVKVENECPKFSAWMNKCM 170 (199)
Q Consensus 123 ~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 170 (199)
+|+. .++ -|+..++++.++..-. ...+.++--++..|.+++.
T Consensus 35 ky~t--~l~-~DvL~~~ll~~L~~~~---r~~~k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 35 KYFT--DLG-YDVLTFCLLERLSNPG---RSRLKDDGTNISQWLQSLA 76 (77)
T ss_pred hhcc--hhh-HHHHHHHHHHHHhccc---chhcCcCCCCHHHHHHHHh
Confidence 4553 244 3899999888776421 1223345588999998874
No 211
>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies
Probab=22.23 E-value=1.2e+02 Score=18.38 Aligned_cols=35 Identities=6% Similarity=-0.145 Sum_probs=22.7
Q ss_pred cEEEEccCCChhhHHHHHHHHHc------CCceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEK------GVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~------gi~~~~~~v~~~ 39 (199)
-+.+|+.++|+.|+...-.+... +-.+....++..
T Consensus 18 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 58 (101)
T cd02961 18 VLVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDCT 58 (101)
T ss_pred EEEEEECCCCHHHHhhhHHHHHHHHHhccCCceEEEEeecc
Confidence 46677778999999876666442 234555556554
No 212
>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu
Probab=22.03 E-value=1.2e+02 Score=18.83 Aligned_cols=35 Identities=11% Similarity=-0.073 Sum_probs=21.8
Q ss_pred cEEEEccCCChhhHHHHHHHHHc-----C-CceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAEK-----G-VEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~~-----g-i~~~~~~v~~~ 39 (199)
.+.+|+.++|+.|+...-.+... + ..+....+|..
T Consensus 21 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~ 61 (104)
T cd02995 21 VLVEFYAPWCGHCKALAPIYEELAEKLKGDDNVVIAKMDAT 61 (104)
T ss_pred EEEEEECCCCHHHHHHhhHHHHHHHHhcCCCCEEEEEEeCc
Confidence 36677788999999875555433 2 23455556654
No 213
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=21.91 E-value=2.1e+02 Score=18.66 Aligned_cols=30 Identities=27% Similarity=0.184 Sum_probs=24.3
Q ss_pred EEEEccCCChhhHHHHHHHHHcCCceeEEE
Q 045685 6 VVLLDCWANPFCLRAKIALAEKGVEYEARA 35 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~~gi~~~~~~ 35 (199)
..|-.....|...-++.+.+++|||++...
T Consensus 58 ~vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~ 87 (100)
T PF15608_consen 58 KVLVRDPDDPDLAHLLLLAEEKGVPVEVYP 87 (100)
T ss_pred EEEECCCCCccHHHHHHHHHHcCCcEEEeC
Confidence 445566678999999999999999988654
No 214
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=21.09 E-value=2.6e+02 Score=18.40 Aligned_cols=21 Identities=24% Similarity=0.173 Sum_probs=14.8
Q ss_pred EEEEccCCChhhHHHHHHHHH
Q 045685 6 VVLLDCWANPFCLRAKIALAE 26 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~vr~~L~~ 26 (199)
+.-++..+|+.|+...-.+..
T Consensus 23 lV~F~a~WC~~C~~~~~~~~~ 43 (117)
T cd02959 23 MLLIHKTWCGACKALKPKFAE 43 (117)
T ss_pred EEEEeCCcCHHHHHHHHHHhh
Confidence 445566899999988555554
No 215
>PRK13947 shikimate kinase; Provisional
Probab=20.61 E-value=1.7e+02 Score=20.40 Aligned_cols=29 Identities=14% Similarity=0.133 Sum_probs=25.8
Q ss_pred CCCCcEEEEccCCChhhHHHHHHHHHcCCce
Q 045685 1 MSKGAVVLLDCWANPFCLRAKIALAEKGVEY 31 (199)
Q Consensus 1 M~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~ 31 (199)
|. ++.|.|.++|+=+.-.+.+.+..|++|
T Consensus 1 m~--~I~l~G~~GsGKst~a~~La~~lg~~~ 29 (171)
T PRK13947 1 MK--NIVLIGFMGTGKTTVGKRVATTLSFGF 29 (171)
T ss_pred CC--eEEEEcCCCCCHHHHHHHHHHHhCCCE
Confidence 55 689999999999999999999999886
No 216
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=20.47 E-value=1.3e+02 Score=19.25 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=22.2
Q ss_pred cEEEEccCCChhhHHHHHHHHH-----cCCceeEEEecCC
Q 045685 5 AVVLLDCWANPFCLRAKIALAE-----KGVEYEARAENLF 39 (199)
Q Consensus 5 ~~~Ly~~~~sp~~~~vr~~L~~-----~gi~~~~~~v~~~ 39 (199)
-+..|+.++||.|++.--.+.. .+..+....++..
T Consensus 24 vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d 63 (109)
T cd02993 24 TLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNAD 63 (109)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECC
Confidence 4667778899999977554433 2334555566654
No 217
>PF13728 TraF: F plasmid transfer operon protein
Probab=20.42 E-value=1.9e+02 Score=21.62 Aligned_cols=32 Identities=9% Similarity=0.171 Sum_probs=20.7
Q ss_pred EEEEccCCChhhHHH----HHHHHHcCCceeEEEec
Q 045685 6 VVLLDCWANPFCLRA----KIALAEKGVEYEARAEN 37 (199)
Q Consensus 6 ~~Ly~~~~sp~~~~v----r~~L~~~gi~~~~~~v~ 37 (199)
+.+++...||+|+.- +.+-...|+.+-.+.+|
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~D 159 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLD 159 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecC
Confidence 556666799999854 44445567765555554
Done!