BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045692
(424 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG GHK+A + RD L L+ I+ +K + N + Q + + +
Sbjct: 67 FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELSKRNTGEGRQVQWDKVFTSCF 123
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
+ E++ ++G A AV S + G+TAV + H++++N GDSRAVL
Sbjct: 124 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 183
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
+ + L+ D KP+ E RI N G+V W LAM+R+
Sbjct: 184 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 228
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
GD LK Y +I PE+++ +RED+ ++LA+DG+WDV+ N EV
Sbjct: 229 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 272
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG GHK+A + RD L L+ I+ +K + N + Q + + +
Sbjct: 70 FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELCKRNTGEGRQVQWDKVFTSCF 126
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
+ E++ ++G A AV S + G+TAV + H++++N GDSRAVL
Sbjct: 127 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 186
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
+ + L+ D KP+ E RI N G+V W LAM+R+
Sbjct: 187 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 231
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
GD LK Y +I PE+++ +RED+ ++LA+DG+WDV+ N EV
Sbjct: 232 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 275
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG GHK+A + RD L L+ I+ +K + N + Q + + +
Sbjct: 64 FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELCKRNTGEGRQVQWDKVFTSCF 120
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
+ E++ ++G A AV S + G+TAV + H++++N GDSRAVL
Sbjct: 121 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 180
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
+ + L+ D KP+ E RI N G+V W LAM+R+
Sbjct: 181 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 225
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
GD LK Y +I PE+++ +RED+ ++LA+DG+WDV+ N EV
Sbjct: 226 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 269
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG GHK+A + RD L L+ I+ +K + N + Q + + +
Sbjct: 68 FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELCKRNTGEGRQVQWDKVFTSCF 124
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
+ E++ ++G A AV S + G+TAV + H++++N GDSRAVL
Sbjct: 125 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 184
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
+ + L+ D KP+ E RI N G+V W LAM+R+
Sbjct: 185 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 229
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
GD LK Y +I PE+++ +RED+ ++LA+DG+WDV+ N EV
Sbjct: 230 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 273
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG GHK+A + RD L L+ I+ +K + N + Q + + +
Sbjct: 77 FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELCKRNTGEGRQVQWDKVFTSCF 133
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
+ E++ ++G A AV S + G+TAV + H++++N GDSRAVL
Sbjct: 134 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 193
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
+ + L+ D KP+ E RI N G+V W LAM+R+
Sbjct: 194 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 238
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
GD LK Y +I PE+++ +RED+ ++LA+DG+WDV+ N EV
Sbjct: 239 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 282
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 28/225 (12%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG GHK+A + RD L L+ I+ +K + N + Q + + +
Sbjct: 53 FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIK-DELCKRNTGEGRQVQWDKVFTSCF 109
Query: 146 VKAYEELDDELGLA---------SAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTR 196
+ E++ ++G A AV S + G+TAV + H++++N GDSRAVL
Sbjct: 110 LTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRG 169
Query: 197 DDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARA 256
+ + L+ D KP+ E RI N G+V W LAM+R+
Sbjct: 170 KE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGVLAMSRS 214
Query: 257 FGDFCLKDYGLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEV 301
GD LK Y +I PE+++ +RED+ ++LA+DG+WDV+ N EV
Sbjct: 215 IGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 258
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 32/239 (13%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG G ++A + R+ + L+ I + ++ +G + Q + +AL S
Sbjct: 61 FFGVYDGHG--GSQVANYCRERMHLALTEEIV---KEKPEFCDGD-TWQEKWKKALFNSF 114
Query: 146 VKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPV 205
++ E++ +A A ++ G+T+V + H+ +AN GDSRAVLC R + P+
Sbjct: 115 MRVDSEIET---VAHAPETV--GSTSVVAVVFPTHIFVANCGDSRAVLC----RGK-TPL 164
Query: 206 QLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDY 265
L+ D KP+ EA RI G+V + V+ V LAM+R+ GD LK
Sbjct: 165 ALSVDHKPDRDDEAARIEAAGGKVIRWNGA-RVFGV---------LAMSRSIGDRYLKP- 213
Query: 266 GLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVI-----RTVACASKKEMAAKMLV 319
+I PE++ + +ED ++LA+DG+WDV+TN EV R + K MA + L+
Sbjct: 214 SVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALL 272
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 69/336 (20%)
Query: 7 IEVKYGSVYEEEEMERKD--NYNNKKIGGEDDFVRVGDNGASVRLQGSSKNISMFTQQGR 64
I ++ E+ +ME D + ++IGGE+ + + G + L+ N+ +Q G+
Sbjct: 77 IRIQADQAPEDLDMEDNDIIEAHREQIGGENLYFQAGKPIPKISLE----NVGCASQIGK 132
Query: 65 KGINQDAMTVWENFTGDKDTV-FCGVFDGHG-PAG-----HKIARHVRDNLPSKLSTAIK 117
+ N+D +F D V + V+DGHG PA + + + D LP +
Sbjct: 133 RKENEDRF----DFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKE------ 182
Query: 118 LLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELG----LASAVDSYSSGATA-V 172
+ LE L A+ E+D L++ +SG TA V
Sbjct: 183 ---------------------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATV 221
Query: 173 NIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAM 232
+++ G L++A++GDSRA+LC + P++LT D PE E ERI+ C G V
Sbjct: 222 ALLRDGIELVVASVGDSRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFV--- 273
Query: 233 DEEPDVYRVW--MPDEDCPG-LAMARAFGDFCLKDYGLISIPEISYRKLTR-EDQFVVLA 288
W + G LAM R+ GD LK G+I+ PE KL +D F+VL
Sbjct: 274 --------AWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLT 325
Query: 289 TDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVR 324
TDG+ ++ + E+ V AA + +A++
Sbjct: 326 TDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ 361
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 38/234 (16%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG G ++A + R+ + L+ I + S+G + + + +L
Sbjct: 54 FFGVYDGHG--GSQVANYCRERMHLALAEEIA---KEKPMLSDG-----DTWLEKWKKAL 103
Query: 146 VKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPV 205
++ +D E+ +V + G+T+V + H+ +AN GDSRAVLC R + +
Sbjct: 104 FNSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLC----RGKTA-L 155
Query: 206 QLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDY 265
L+ D KP+ EA RI G+V + V+ V LAM+R+ GD LK
Sbjct: 156 PLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGV---------LAMSRSIGDRYLKP- 204
Query: 266 GLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLV 319
+I PE++ K +ED ++LA+DGVWDV+T+ E AC EMA K ++
Sbjct: 205 SIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEE-----AC----EMARKRIL 249
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 38/234 (16%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG G ++A + R+ + L+ I K D + + + +L
Sbjct: 57 FFGVYDGHG--GSQVANYCRERMHLALAEEIAKEKPMLCD--------GDTWLEKWKKAL 106
Query: 146 VKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPV 205
++ +D E+ +V + G+T+V + H+ +AN GDSRAVLC R + +
Sbjct: 107 FNSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLC----RGKTA-L 158
Query: 206 QLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDY 265
L+ D KP+ EA RI G+V + V+ V LAM+R+ GD LK
Sbjct: 159 PLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGV---------LAMSRSIGDRYLKP- 207
Query: 266 GLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLV 319
+I PE++ K +ED ++LA+DGVWDV+T+ E AC EMA K ++
Sbjct: 208 SIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEE-----AC----EMARKRIL 252
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 38/234 (16%)
Query: 86 FCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASL 145
F GV+DGHG G ++A + R+ + L+ I K D + + + +L
Sbjct: 69 FFGVYDGHG--GSQVANYCRERMHLALAEEIAKEKPMLCD--------GDTWLEKWKKAL 118
Query: 146 VKAYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPV 205
++ +D E+ +V + G+T+V + H+ +AN GDSRAVLC R + +
Sbjct: 119 FNSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLC----RGKTA-L 170
Query: 206 QLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDY 265
L+ D KP+ EA RI G+V + V+ V LAM+R+ GD LK
Sbjct: 171 PLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGV---------LAMSRSIGDRYLKP- 219
Query: 266 GLISIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLV 319
+I PE++ K +ED ++LA+DGVWDV+T+ E AC EMA K ++
Sbjct: 220 SIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEE-----AC----EMARKRIL 264
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 41/259 (15%)
Query: 60 TQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPSKLSTAIKLL 119
+ QG + +DA NF D F V+DGHG G ++A++ +LP+ L T
Sbjct: 29 SMQGWRISQEDAHNCILNF--DDQCSFFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYG 84
Query: 120 KRNHEDYSNGSKSSQNPFFRALEASLV--KAYEELDDELGLASAVDS---YSSGATAVNI 174
++ E K+ + F +A+L+ K EEL G ++ D+ SG TAV
Sbjct: 85 RKEFE------KALKEAFL-GFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVA 137
Query: 175 IKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDE 234
+ G+ L +AN GDSR V+C RN ++++ D KPE E +RI GRV +D
Sbjct: 138 LLHGKDLYVANAGDSRCVVC----RNGKA-LEMSFDHKPEDTVEYQRIEKAGGRV-TLDG 191
Query: 235 EPDVYRVWMPDEDCPGLAMARAFGDFCLK--------DYGLISIPEISYRKLTREDQFVV 286
+ GL ++RA GD K + + ++P+I + ED+F+V
Sbjct: 192 RVN-----------GGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMV 240
Query: 287 LATDGVWDVLTNSEVIRTV 305
LA DG+W+ +T+ +V++ V
Sbjct: 241 LACDGIWNFMTSEQVVQFV 259
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 45/265 (16%)
Query: 50 QGSSKNISMFTQQGRKGINQDAMTVWENF-TGDKDTVFCGVFDGHGPAGHKIARHVRDNL 108
QG+ + + QG + +DA T +G + F V+DGH AG ++A++ ++L
Sbjct: 18 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGH--AGSQVAKYCCEHL 75
Query: 109 PSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYS-- 166
++ N++D+ S+ P ++ + + E+D+ + + S +
Sbjct: 76 LDHIT--------NNQDFKG---SAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADR 124
Query: 167 SGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCK 226
SG+TAV ++ +H N GDSR +LC RN+ V T D KP E ERI+N
Sbjct: 125 SGSTAVGVLISPQHTYFINCGDSRGLLC----RNRKVHF-FTQDHKPSNPLEKERIQNAG 179
Query: 227 GRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDF---CLKDYG----LISIPEISYRKLT 279
G V + RV LA++RA GDF C+ G L+S PE +
Sbjct: 180 GSVM-------IQRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVS-PEPEVHDIE 225
Query: 280 R---EDQFVVLATDGVWDVLTNSEV 301
R +DQF++LA DG+WDV+ N E+
Sbjct: 226 RSEEDDQFIILACDGIWDVMGNEEL 250
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 45/265 (16%)
Query: 50 QGSSKNISMFTQQGRKGINQDAMTVWENF-TGDKDTVFCGVFDGHGPAGHKIARHVRDNL 108
QG+ + + QG + +DA T +G + F V+DGH AG ++A++ ++L
Sbjct: 18 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGH--AGSQVAKYCCEHL 75
Query: 109 PSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDSYS-- 166
++ N++D+ S+ P ++ + + E+D+ + + S +
Sbjct: 76 LDHIT--------NNQDFKG---SAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADR 124
Query: 167 SGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIRNCK 226
SG+TAV ++ +H N GDSR +LC RN+ V T D KP E ERI+N
Sbjct: 125 SGSTAVGVLISPQHTYFINCGDSRGLLC----RNRKVHF-FTQDHKPSNPLEKERIQNAG 179
Query: 227 GRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDF---CLKDYG----LISIPEISYRKLT 279
G V + RV LA++RA GDF C+ G L+S PE +
Sbjct: 180 GSVM-------IQRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVS-PEPEVHDIE 225
Query: 280 R---EDQFVVLATDGVWDVLTNSEV 301
R +DQF++LA DG+WDV+ N E+
Sbjct: 226 RSEEDDQFIILACDGIWDVMGNEEL 250
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 59/292 (20%)
Query: 47 VRLQGSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTV-FCGVFDGHG-PAG-----HK 99
+ L+ S +N+ +Q G++ N+D +F D V + V+DGHG PA
Sbjct: 1 MSLKISLENVGCASQIGKRKENEDRF----DFAQLTDEVLYFAVYDGHGGPAAADFCHTH 56
Query: 100 IARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELG-- 157
+ + + D LP + + LE L A+ E+D
Sbjct: 57 MEKCIMDLLPKE---------------------------KNLETLLTLAFLEIDKAFSSH 89
Query: 158 --LASAVDSYSSGATA-VNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPE 214
L++ +SG TA V +++ G L++A++GDSRA+LC + P++LT D PE
Sbjct: 90 ARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGK-----PMKLTIDHTPE 144
Query: 215 IASEAERIRNCKGRV-FAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISIPEI 273
E ERI+ C G V + +P V LAM R+ GD LK G+I+ PE
Sbjct: 145 RKDEKERIKKCGGFVAWNSLGQPHVN---------GRLAMTRSIGDLDLKTSGVIAEPET 195
Query: 274 SYRKLTR-EDQFVVLATDGVWDVLTNSEVIRTVACASKKEMAAKMLVSRAVR 324
KL +D F+VL TDG+ ++ + E+ V AA + +A++
Sbjct: 196 KRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ 247
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 47/271 (17%)
Query: 51 GSSKNISMFTQQGRKGINQDAMTVWENFT-GDKDTVFCGVFDGHGPAGHKIARHVRDNLP 109
G+ + + QG + +DA T G +D F V+DGH AG ++A + +L
Sbjct: 21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGH--AGSRVANYCSTHLL 78
Query: 110 SKLSTAIKLLKRNHEDYSNGSKS------SQNPFFRALEASLVKAYEELDDELGLASAVD 163
++T +ED+ KS S + +K E + + L + +D
Sbjct: 79 EHITT--------NEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMD 130
Query: 164 SYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIR 223
SG+TAV ++ +H+ N GDSRAVL RN V T D KP E ERI+
Sbjct: 131 R--SGSTAVGVMISPKHIYFINCGDSRAVLY----RNGQVCFS-TQDHKPCNPREKERIQ 183
Query: 224 NCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDF---CLKDYG----LISIPEISYR 276
N G V + RV LA++RA GD+ C+ G L+S PE
Sbjct: 184 NAGGSVM-------IQRV------NGSLAVSRALGDYDYKCVDGKGPTEQLVS-PEPEVY 229
Query: 277 KLTR--EDQFVVLATDGVWDVLTNSEVIRTV 305
++ R ED+F++LA DG+WDV++N E+ V
Sbjct: 230 EILRAEEDEFIILAXDGIWDVMSNEELCEYV 260
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 53/319 (16%)
Query: 57 SMFTQQGRKGINQDAMTVWENFT-GDKDTVFCGVFDG-------------------HGPA 96
++FT G + +D T+ G D F GVFDG PA
Sbjct: 25 AIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPA 84
Query: 97 GHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDEL 156
++ +R ++P+ KL + + + K++ N LVK E+L+ +
Sbjct: 85 WQEVTEXLRSDVPAT-EVDEKLPQLLDQAVDDXYKNADN--------ELVKXCEQLNKD- 134
Query: 157 GLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIA 216
Y+S + ++ KG + + +LGDSR + + N L LT D KP+
Sbjct: 135 --------YASSTSVTAVLAKG-FVAVGHLGDSR-IAXGVETPNGLNCEFLTVDHKPDXP 184
Query: 217 SEAERIRNCKGRVFAMDEEPDVYRVWMPD--------EDCPGLAMARAFGDFCLKDYGLI 268
E RI G V + + + D E L +RAFG LK YGL
Sbjct: 185 HEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLS 244
Query: 269 SIPEISYRKLTREDQFVVLATDGVWDVLTNSEVIRTVACASKKE--MAAKMLVSRAVRAW 326
+ P++ ++T + + +LATDG+WDV + ++ + +A +++E A+ LV +
Sbjct: 245 NQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVE-IAXQARQEGRNPAQALVEXTLAEQ 303
Query: 327 RTKYPGSKIDDCAAICLFL 345
+++ D+ A +F
Sbjct: 304 QSR--NQSADNITAXTVFF 320
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 141 LEASLVKAYEELDDELGLASAV---DSY---------SSGATAVNIIKKGEHLIIANLGD 188
++ +L+ A++ LD+++ L + V +S+ SGATA G L +AN GD
Sbjct: 161 VKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGD 220
Query: 189 SRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIR---------------NCKGRVFAMD 233
SRA+L +++ V L+ D + E ER++ G +
Sbjct: 221 SRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFR 280
Query: 234 EEPDVYRVWMPD------EDCPGLAMARAFGDFCLKDYG----LISIPEISYRKLTREDQ 283
DV W D E P + F +Y L + PE++Y +L +D+
Sbjct: 281 AFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDK 340
Query: 284 FVVLATDGVWDVLTNSEVIRTV 305
F+VLATDG+W+ + +V+R V
Sbjct: 341 FLVLATDGLWETMHRQDVVRIV 362
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 141 LEASLVKAYEELDDELGLASAV---DSY---------SSGATAVNIIKKGEHLIIANLGD 188
++ +L+ A++ LD+++ L + V +S+ SGATA G L +AN GD
Sbjct: 161 VKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGD 220
Query: 189 SRAVLCTRDDRNQLVPVQLTTDLKPEIASEAERIR---------------NCKGRVFAMD 233
SRA+L +++ V L+ D + E +R++ G +
Sbjct: 221 SRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFR 280
Query: 234 EEPDVYRVWMPD------EDCPGLAMARAFGDFCLKDYG----LISIPEISYRKLTREDQ 283
DV W D E P + F +Y L + PE++Y +L +D+
Sbjct: 281 AFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDK 340
Query: 284 FVVLATDGVWDVLTNSEVIRTV 305
F+VLATDG+W+ + +V+R V
Sbjct: 341 FLVLATDGLWETMHRQDVVRIV 362
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 158 LASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIAS 217
L S ++ S G++AV + HL + N+G+ RA+LC D+ + L QL+ D A
Sbjct: 144 LDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAE 203
Query: 218 EAERI 222
EA R+
Sbjct: 204 EAARL 208
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 105/270 (38%), Gaps = 46/270 (17%)
Query: 51 GSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPS 110
GS+ N S ++ G+ + W F + + GVF+G+ G+++ V
Sbjct: 32 GSASNRS-YSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYD--GNRVTNFV----AQ 84
Query: 111 KLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELG---------LASA 161
+LS + L + N E + F +E S + E +DD L L +
Sbjct: 85 RLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFL---ESIDDALAEKASLQLERLKTL 141
Query: 162 VDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQLVPVQLTTDLKPEIASEAER 221
S GA AV + L +AN+G +RA+LC + + L QL D E E R
Sbjct: 142 EREISGGAMAVVAVLLNNKLYVANVGTNRALLC-KSTVDGLQVTQLNVDHTTENEDELFR 200
Query: 222 IRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCLKDYG--------------L 267
+ D ++ C G R GD+ +K YG +
Sbjct: 201 LSQLG---------LDAGKIKQVGIIC-GQESTRRIGDYKVK-YGYTDIDLLSAAKSKPI 249
Query: 268 ISIPEI-SYRKLTREDQFVVLATDGVWDVL 296
I+ PEI + L F+VL ++G++ L
Sbjct: 250 IAEPEIHGAQPLDGVTGFLVLMSEGLYKAL 279
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 107/289 (37%), Gaps = 65/289 (22%)
Query: 51 GSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPS 110
GS+ N S ++ G+ + W F + + GVF+G+ G+++ V
Sbjct: 32 GSASNRS-YSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYD--GNRVTNFV----AQ 84
Query: 111 KLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDS------ 164
+LS + L + N E + F +E S + E +DD L +++ S
Sbjct: 85 RLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFL---ESIDDALAEKASLQSQLPEGV 141
Query: 165 ----------------------YSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQL 202
S GA AV + L +AN+G +RA+LC + + L
Sbjct: 142 PQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLC-KSTVDGL 200
Query: 203 VPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCL 262
QL D E E R+ D ++ C G R GD+ +
Sbjct: 201 QVTQLNVDHTTENEDELFRLSQLG---------LDAGKIKQVGIIC-GQESTRRIGDYKV 250
Query: 263 KDYG--------------LISIPEI-SYRKLTREDQFVVLATDGVWDVL 296
K YG +I+ PEI + L F+VL ++G++ L
Sbjct: 251 K-YGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL 298
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 107/289 (37%), Gaps = 65/289 (22%)
Query: 51 GSSKNISMFTQQGRKGINQDAMTVWENFTGDKDTVFCGVFDGHGPAGHKIARHVRDNLPS 110
GS+ N S ++ G+ + W F + + GVF+G+ G+++ V
Sbjct: 30 GSASNRS-YSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYD--GNRVTNFVAQ---- 82
Query: 111 KLSTAIKLLKRNHEDYSNGSKSSQNPFFRALEASLVKAYEELDDELGLASAVDS------ 164
+LS + L + N E + F +E S + E +DD L +++ S
Sbjct: 83 RLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFL---ESIDDALAEKASLQSQLPEGV 139
Query: 165 ----------------------YSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRNQL 202
S GA AV + L +AN+G +RA+LC + + L
Sbjct: 140 PQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLC-KSTVDGL 198
Query: 203 VPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDCPGLAMARAFGDFCL 262
QL D E E R+ D ++ C G R GD+ +
Sbjct: 199 QVTQLNVDHTTENEDELFRLSQLG---------LDAGKIKQVGIIC-GQESTRRIGDYKV 248
Query: 263 KDYG--------------LISIPEI-SYRKLTREDQFVVLATDGVWDVL 296
K YG +I+ PEI + L F+VL ++G++ L
Sbjct: 249 K-YGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL 296
>pdb|3K2Z|A Chain A, Crystal Structure Of A Lexa Protein From Thermotoga
Maritima
pdb|3K2Z|B Chain B, Crystal Structure Of A Lexa Protein From Thermotoga
Maritima
Length = 196
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Query: 91 DGHGPAGHKIARHVRDNLPSKLSTAIKLLKRNHEDYSNG-------SKSSQN--PFFRAL 141
+G+ P+ +IAR R L I L K+ + + NG SKS +N P +
Sbjct: 21 NGYPPSVREIARRFRITPRGALLHLIALEKKGYIERKNGKPRALRISKSIRNKIPLIGEI 80
Query: 142 EASLVK-AYEELDDELGLASAVDSYSSGATAVNIIKKGEHLIIANLGDSRAVLCTRDDRN 200
A + A E L+D + + + SSG + KGE +I ++ D VL R D
Sbjct: 81 RAGEKREAIEYLEDYIEIPESF--LSSGYDHFLLKVKGESMIEEHICDGDLVLVRRQDWA 138
Query: 201 Q 201
Q
Sbjct: 139 Q 139
>pdb|3FR3|A Chain A, Tetramerization And Cooperativity In Plasmodium Falciparum
Glutathione Transferase Are Mediated By The Atypic Loop
113-118
pdb|3FR3|B Chain B, Tetramerization And Cooperativity In Plasmodium Falciparum
Glutathione Transferase Are Mediated By The Atypic Loop
113-118
Length = 208
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 83 DTVFCGVFDGHGPAGHKIAR---HVRDNLPSKLSTAIKLLKRNHEDYSN 128
D +FCGV D H + A + ++LP KLLK+NH + +N
Sbjct: 97 DMIFCGVQDIHYKFNNTAANETTFLNEDLPKWSGYFEKLLKKNHTNNNN 145
>pdb|1Z2V|A Chain A, Crystal Structure Of Glu60 Deletion Mutant Of Human Acidic
Fibroblast Growth Factor
pdb|1Z2V|B Chain B, Crystal Structure Of Glu60 Deletion Mutant Of Human Acidic
Fibroblast Growth Factor
Length = 145
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 195 TRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDC 248
TRD +Q + +QL+ + E+ I++ G+ AMD + +Y P+E+C
Sbjct: 40 TRDRSDQHIQLQLSAESVGEVY-----IKSTTGQYLAMDTDGLLYGSQTPNEEC 88
>pdb|3OT5|A Chain A, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
pdb|3OT5|B Chain B, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
pdb|3OT5|C Chain C, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
pdb|3OT5|D Chain D, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
Length = 403
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 165 YSSGATAVNIIKKG-----EHLIIANLGDSRAVLCTRDDRNQL 202
+ +G TA++ +K H I+ NLGD+R +L T R L
Sbjct: 195 FVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRENL 237
>pdb|1Z4S|A Chain A, Crystal Structure Of Gly19 And Glu60 Deletion Mutant Of
Human Acidic Fibroblast Growth Factor
pdb|1Z4S|B Chain B, Crystal Structure Of Gly19 And Glu60 Deletion Mutant Of
Human Acidic Fibroblast Growth Factor
pdb|1Z4S|C Chain C, Crystal Structure Of Gly19 And Glu60 Deletion Mutant Of
Human Acidic Fibroblast Growth Factor
pdb|1Z4S|D Chain D, Crystal Structure Of Gly19 And Glu60 Deletion Mutant Of
Human Acidic Fibroblast Growth Factor
Length = 144
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 195 TRDDRNQLVPVQLTTDLKPEIASEAERIRNCKGRVFAMDEEPDVYRVWMPDEDC 248
TRD +Q + +QL+ + E+ I++ G+ AMD + +Y P+E+C
Sbjct: 39 TRDRSDQHIQLQLSAESVGEVY-----IKSTTGQYLAMDTDGLLYGSQTPNEEC 87
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
Query: 76 ENFTGDKDTV-------FCGVFDGHGPAGHKIARHVRDNLP 109
+NF DKDTV +CG P KIA ++DN P
Sbjct: 28 DNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDP 68
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,339,494
Number of Sequences: 62578
Number of extensions: 487761
Number of successful extensions: 1394
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1310
Number of HSP's gapped (non-prelim): 36
length of query: 424
length of database: 14,973,337
effective HSP length: 101
effective length of query: 323
effective length of database: 8,652,959
effective search space: 2794905757
effective search space used: 2794905757
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)