BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045695
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S746|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1
Length = 594
Score = 322 bits (826), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 150/247 (60%), Positives = 194/247 (78%), Gaps = 1/247 (0%)
Query: 31 SYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFGAALSDLSSTSP 90
S YDYI+IGGGTAGCPLAATLSQN SVL+LERGG P+ N N++ L +F L+D+S++S
Sbjct: 61 SSYDYIVIGGGTAGCPLAATLSQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSA 120
Query: 91 SQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVEKVVAF 150
SQ F+S DGV N+RARVLGGGSC+NAGFY+RA +V+ GWD +LV ESY WVE+ +
Sbjct: 121 SQAFVSTDGVYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVH 180
Query: 151 EPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNGQRHTAADLLEYANPS 210
+P + WQ A+RD L+EVGV P+NGFTYDH+ GTKIGGTIFD+ G+RHTAA+LL YANP
Sbjct: 181 QPKLTLWQKALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQ 240
Query: 211 GLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 270
L +L++ATV K++F G RP+ GV+F+D G +H+A L N +E+I+S+GA+GSP
Sbjct: 241 KLRVLIYATVQKIVFDTSG-TRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSP 299
Query: 271 QLLMLSG 277
Q+LMLSG
Sbjct: 300 QMLMLSG 306
>sp|Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana GN=At1g73050
PE=2 SV=1
Length = 552
Score = 278 bits (711), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/265 (53%), Positives = 187/265 (70%), Gaps = 10/265 (3%)
Query: 20 FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFG 79
F+ NAT YYDYII+GGGTAGCPLAATLSQ+ VLLLERGG PY PN+ + F
Sbjct: 41 FISNATDFASEDYYDYIIVGGGTAGCPLAATLSQSFRVLLLERGGVPYNRPNVMSHDGFL 100
Query: 80 AALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETG--WDERL 136
L+D+++ SP+Q FISE+GV N+R RVLGG S +NAGFY+RA + +G WD
Sbjct: 101 TTLTDVNNFDSPAQSFISEEGVPNARGRVLGGSSAINAGFYSRADKQFFENSGLVWDLSS 160
Query: 137 VNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNGQ 196
VN+SY+WVE+ + F P +R WQ+A+RD L+EVGV P+NGFT +H GTKIGG+ FD+ G+
Sbjct: 161 VNQSYEWVERAIVFRPQLRTWQTAIRDALLEVGVHPFNGFTLEHKVGTKIGGSTFDRTGR 220
Query: 197 RHTAADLLEYANPSGLTLLLHATVHKVLF----RIKGKARPQAHGVVFRDATGAKHRAYL 252
RH++ADLL YA S + + ++ATV +VL + G + A GVV+RD G H A +
Sbjct: 221 RHSSADLLRYARSSNIRVAVYATVERVLLASSPSVSG-SNVSAIGVVYRDQLGRFHHALI 279
Query: 253 KNGPKNEIIVSAGALGSPQLLMLSG 277
++ + E+I+SAGALGSPQLL LSG
Sbjct: 280 RD--RGEVILSAGALGSPQLLFLSG 302
>sp|P52707|MDL3_PRUSE (R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1
Length = 573
Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 170/262 (64%), Gaps = 6/262 (2%)
Query: 19 SFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSF 78
SF+++AT + YDYII+GGGTAGCPLAATLS N SVL+LERG P PN+ F
Sbjct: 40 SFVYDATDPELEGSYDYIIVGGGTAGCPLAATLSANYSVLVLERGSLPTEYPNLLISDGF 99
Query: 79 GAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETG--WDER 135
L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA + +TG WD
Sbjct: 100 VYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYVRANTSFFNQTGIEWDMD 159
Query: 136 LVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNG 195
LVN++Y+WVE + FEP + WQ+ + +E G+LP NGF+ DHL GT++ G+ FD NG
Sbjct: 160 LVNQTYEWVEDTIVFEPDSQTWQTVIGTAYLEAGILPNNGFSVDHLAGTRLTGSTFDNNG 219
Query: 196 QRHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNG 255
RH + +LL +P+ L + + A V K++F + A GV++ D+ G H+A+++
Sbjct: 220 TRHASDELLNKGDPNNLRVAVQAAVEKIIFS-SNTSGVTAIGVIYTDSNGTTHQAFVRG- 277
Query: 256 PKNEIIVSAGALGSPQLLMLSG 277
+ E+I+SAG +GSPQLL+LSG
Sbjct: 278 -EGEVILSAGPIGSPQLLLLSG 298
>sp|O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1
Length = 559
Score = 234 bits (596), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 173/272 (63%), Gaps = 11/272 (4%)
Query: 13 TAALNYS---FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGN 69
T+A ++S F++NAT YDYI+IGGGT+GCPLAATLS+ VLLLERG
Sbjct: 31 TSAHDFSYLKFVYNATDTSLEGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTIATEY 90
Query: 70 PNITNLGSFGAALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVR 128
PN F L +P +RF+SEDG+ N RAR+LGG + +NAG Y RA +
Sbjct: 91 PNTLTADGFAYNLQQQDDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANISFYS 150
Query: 129 ETG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKI 186
+TG WD LVN++Y+WVE + +P + WQS + +G +E G+LP NGF+ DH GT++
Sbjct: 151 QTGIEWDLDLVNKTYEWVEDAIVVKPNNQSWQSVIGEGFLEAGILPDNGFSLDHEAGTRL 210
Query: 187 GGTIFDQNGQRHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGA 246
G+ FD NG RH A +LL +P+ L + + A+V K+LF + A GV++ D+ G
Sbjct: 211 TGSTFDNNGTRHAADELLNKGDPNNLLVAVQASVEKILFS-SNTSNLSAIGVIYTDSDGN 269
Query: 247 KHRAYLK-NGPKNEIIVSAGALGSPQLLMLSG 277
H+A+++ NG E+IVSAG +G+PQLL+LSG
Sbjct: 270 SHQAFVRGNG---EVIVSAGTIGTPQLLLLSG 298
>sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1
Length = 576
Score = 234 bits (596), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 172/271 (63%), Gaps = 9/271 (3%)
Query: 13 TAALNYS---FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGN 69
T+A ++S F+++A + YDYII+GGGTAGCPLAATLS N SVL+LERG P
Sbjct: 32 TSAHDFSYLEFVYDANDTELEGTYDYIIVGGGTAGCPLAATLSANYSVLVLERGTLPTEY 91
Query: 70 PNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVR 128
PN+ F L + +P +RF+S DG+ N R RVLGG S +NAG Y RA +
Sbjct: 92 PNLLTSDGFIYNLQQEDDGQTPVERFVSGDGIDNVRGRVLGGTSMINAGVYVRANTSFFN 151
Query: 129 ETG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKI 186
+TG WD LVN++Y WVE + F+P + WQ+ +EVG+LP NGF+ DHL GT++
Sbjct: 152 QTGIEWDMDLVNKTYDWVEDTIVFKPDFQFWQNLTGTAFLEVGILPDNGFSLDHLEGTRL 211
Query: 187 GGTIFDQNGQRHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGA 246
G+ FD NG RH + +LL +P+ L + +HA V K++F + A GV++ D+ G
Sbjct: 212 TGSTFDNNGTRHASDELLNKGDPNNLRVAVHAAVEKIIFS-SDSSGVTAIGVIYTDSNGT 270
Query: 247 KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
H+A+++ E+I+SAG +GSPQLL+LSG
Sbjct: 271 THQAFVRG--DGEVILSAGPIGSPQLLLLSG 299
>sp|Q945K2|MDL2_PRUDU (R)-mandelonitrile lyase 2 OS=Prunus dulcis GN=MDL2 PE=1 SV=1
Length = 563
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 7/262 (2%)
Query: 19 SFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSF 78
SF ++AT + YDY+I+GGGT+GCPLAATLS+ VL+LERG P PN+ F
Sbjct: 40 SFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGF 99
Query: 79 GAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA--APYYVRETGWDER 135
L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA + Y WD
Sbjct: 100 VYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMD 159
Query: 136 LVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNG 195
LVN++Y+WVE + ++P + WQS + +E GV P +GF+ DH GT+I G+ FD G
Sbjct: 160 LVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKG 219
Query: 196 QRHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNG 255
RH A +LL N + L + +HA+V K++F A GV++RD+ G H+A++++
Sbjct: 220 TRHAADELLNKGNSNNLRVGVHASVEKIIF--SNAPGLTATGVIYRDSNGTPHQAFVRS- 276
Query: 256 PKNEIIVSAGALGSPQLLMLSG 277
K E+IVSAG +G+PQLL+LSG
Sbjct: 277 -KGEVIVSAGTIGTPQLLLLSG 297
>sp|P52706|MDL1_PRUSE (R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1
Length = 563
Score = 227 bits (579), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 20 FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFG 79
F ++AT + YDY+I+GGGT+GCPLAATLS+ VL+LERG P PN+ F
Sbjct: 41 FAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFV 100
Query: 80 AALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA--APYYVRETGWDERL 136
L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA + Y WD L
Sbjct: 101 YNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYARANTSIYSASGVDWDMDL 160
Query: 137 VNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNGQ 196
VN++Y+WVE + F+P + WQS +E GV P +GF+ DH GT+I G+ FD G
Sbjct: 161 VNKTYEWVEDTIVFKPNYQPWQSVTGTAFLEAGVDPNHGFSLDHEAGTRITGSTFDNKGT 220
Query: 197 RHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNGP 256
RH A +LL N + L + +HA+V K++F A GV++RD+ G HRA++++
Sbjct: 221 RHAADELLNKGNSNNLRVGVHASVEKIIF--SNAPGLTATGVIYRDSNGTPHRAFVRS-- 276
Query: 257 KNEIIVSAGALGSPQLLMLSG 277
K E+IVSAG +G+PQLL+LSG
Sbjct: 277 KGEVIVSAGTIGTPQLLLLSG 297
>sp|O82784|MDL4_PRUSE (R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1
Length = 574
Score = 220 bits (560), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 158/261 (60%), Gaps = 6/261 (2%)
Query: 20 FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFG 79
F++NA + YDYII+GGGT+GCPLAATLS N SVL+LERG PN + F
Sbjct: 42 FVYNAVDLELEGSYDYIIVGGGTSGCPLAATLSANYSVLVLERGTIATEYPNTLTVDGFA 101
Query: 80 AALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETG--WDERL 136
L +P +RF+SEDG+ N R+R+LGG + +NAG Y RA + +G WD L
Sbjct: 102 YNLQQQDDGKTPVERFVSEDGIDNVRSRILGGTTIINAGVYARANESFYNNSGVEWDLDL 161
Query: 137 VNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNGQ 196
VNE+Y+WVE + ++P + WQS +E GV P NGF H GT++ G+ FD +G
Sbjct: 162 VNEAYEWVEDAIVYKPSNQSWQSITGTAFLEAGVHPDNGFGLVHEEGTRLTGSTFDNSGT 221
Query: 197 RHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNGP 256
RH + +LL +P L + + A V K++F + A GVV+ D+ G HRA +
Sbjct: 222 RHASDELLNKGDPDNLKVAVEAAVQKIIFSTESSGL-TAVGVVYTDSNGTSHRALVSG-- 278
Query: 257 KNEIIVSAGALGSPQLLMLSG 277
K E+I+SAG LG+PQLL+LSG
Sbjct: 279 KGEVILSAGTLGTPQLLLLSG 299
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 27 AQPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS-PYGNPNITNLGSFGAALS 83
++P YD+I+IGGG+AG +A+ LS+ VLL+E GG P G + +F +
Sbjct: 59 SEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDI 118
Query: 84 DLSSTSPSQRFIS----EDGVINSRARVLGGGSCLNAGFYTRAAPYYVRET--------- 130
D + +R E R +VLGG S +N Y R RE
Sbjct: 119 DYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGN----REDYDDWAAQGN 174
Query: 131 -GWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNG-FTYDHLY-GTKIG 187
GW + V ++ E + + ++ + + GL+ VG PYN +Y L G ++G
Sbjct: 175 PGWSYQDVLPFFKKSEDNLELDAVGTEYHA--KGGLLPVGKFPYNPPLSYALLKAGEEMG 232
Query: 188 GTIFDQNGQ--------RHTAADLLEYANP----------SGLTLLLHATVHKVLFRIKG 229
++ D NGQ + TA + + Y++ + L +LL+ TV KVL
Sbjct: 233 FSVQDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGT 292
Query: 230 KARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
K GV D G+ + +K E+IVS GA+ SPQ+L+LSG
Sbjct: 293 K---NVVGVEVSDQFGSMRKILVKK----EVIVSGGAVNSPQILLLSG 333
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 50/288 (17%)
Query: 27 AQPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITN--LGSFGAAL 82
++P YD+I+IGGG+AG +A+ LS+ VLL+E GG I + L G+ +
Sbjct: 59 SEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDI 118
Query: 83 SDLSSTSPSQRFI---SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRET--------- 130
+T P E R +VLGG S LN Y R RE
Sbjct: 119 DYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGN----REDYDDWAADGN 174
Query: 131 -GWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN-GFTYDHLY-GTKIG 187
GW V ++ E + + ++ + + GL+ VG PYN +Y L G ++G
Sbjct: 175 PGWAYNDVLPFFKKSEDNLDLDEVGTEYHA--KGGLLPVGKFPYNPPLSYAILKAGEELG 232
Query: 188 GTIFDQNGQ--------RHTAADLLEYANP----------SGLTLLLHATVHKVLFRIKG 229
++ D NGQ + TA + + Y++ + L +LL+ T K+L
Sbjct: 233 FSVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHT 292
Query: 230 KARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
K GV D G+ + + K E+++SAGA+ SP +L+LSG
Sbjct: 293 K---NVLGVEVSDQFGSTRKILV----KKEVVLSAGAVNSPHILLLSG 333
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 122/291 (41%), Gaps = 70/291 (24%)
Query: 30 VSYYDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGS--------PYGNPNITNLGSFG 79
S +DYI++GGG+AGC LAA LS+N S V L+E G P G +T G
Sbjct: 2 TSGFDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTT----G 57
Query: 80 AALSDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE------TGWD 133
DL T P Q+ + + + R+LGGGS +NA +TR P GW
Sbjct: 58 PHTWDL-LTEP-QKHANNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWS 115
Query: 134 ERLVNESY-----------QW--------VEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN 174
R V + + W V + P R + + + E+G LPYN
Sbjct: 116 FRDVQKYFIRSEGNAVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQ----EMG-LPYN 170
Query: 175 -GFTYDHLYGTKIGGTIFDQNGQRHTAADLLEYA-NPSGLTLLLHATVHKVLFRIKGKAR 232
F G I N + TA L A LT++ A V K++F
Sbjct: 171 PDFNGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVF------- 223
Query: 233 PQAHGVVFRDATGAKHRAYLKNGPKN------EIIVSAGALGSPQLLMLSG 277
+ T A Y+ NG N EI+V+AGA+G+P+L+MLSG
Sbjct: 224 ---------NGTRATGVQYIANGTLNTAEASQEIVVTAGAIGTPKLMMLSG 265
>sp|B2JS89|BETA_BURP8 Choline dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=betA PE=3 SV=1
Length = 572
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 54/283 (19%)
Query: 33 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAALS------- 83
YDYIIIG G+AG LA L++ + +VLLLE GG Y T + AAL+
Sbjct: 6 YDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGGPDYRFDFRTQM---PAALAYPLQGRR 62
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQ 142
+ + + + F++ + R + LGG S +N Y R + GW ER E++
Sbjct: 63 YNWAYETDPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNA--LDYDGWAERKGLENWT 120
Query: 143 WVEKVVAF----------------EPPM-----RQWQSAVRDGLVEVGVLPYNGFTYDHL 181
+++ + F + P+ ++ + + + +VE GV T D L
Sbjct: 121 YLDCLPYFRKAETRDAGANDYHGGDGPVHVTTSKRGVNPLFEAMVEAGVQAGYPRT-DDL 179
Query: 182 YGTKIGG-----TIFDQNGQR-HTAADLLEYANPS-GLTLLLHATVHKVLFRIKGKARPQ 234
G + G NG+R TA L+ A P LT++ +AT ++LF K +
Sbjct: 180 NGYQQEGFGPMDRTVTANGRRASTARGYLDQARPRPNLTIVTYATTDRILFSGK-----R 234
Query: 235 AHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
A GVV+ D +A + + E+++ +GA+ SPQ+L SG
Sbjct: 235 AQGVVYLDG-----QAQITAHARREVLLCSGAIASPQILQRSG 272
>sp|A8Z5A4|BETA_STAAT Choline dehydrogenase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|Q6GDJ1|BETA_STAAR Choline dehydrogenase OS=Staphylococcus aureus (strain MRSA252)
GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|P60337|BETA_STAAN Choline dehydrogenase OS=Staphylococcus aureus (strain N315)
GN=betA PE=1 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|P60336|BETA_STAAM Choline dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=betA PE=1 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|A6QK99|BETA_STAAE Choline dehydrogenase OS=Staphylococcus aureus (strain Newman)
GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|Q5HCU1|BETA_STAAC Choline dehydrogenase OS=Staphylococcus aureus (strain COL) GN=betA
PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|Q2YWJ5|BETA_STAAB Choline dehydrogenase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|A5IW37|BETA_STAA9 Choline dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=betA
PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|Q2FV11|BETA_STAA8 Choline dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325)
GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|Q2FDP9|BETA_STAA3 Choline dehydrogenase OS=Staphylococcus aureus (strain USA300)
GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|A6U4Z2|BETA_STAA2 Choline dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=betA
PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|A7X6Z3|BETA_STAA1 Choline dehydrogenase OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=betA PE=3 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG NE+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSG 273
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 123/281 (43%), Gaps = 52/281 (18%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNI-----TNLGSFGAALSDL 85
YDYII+G G+AGC LA LS + S V LLE G NP I L S L+
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLE-AGPRDTNPLIHMPLGIALLSNSKKLNWA 60
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA--APYYVRET------GW----- 132
T+P Q+ ++E + R + LGG S +NA Y R Y E GW
Sbjct: 61 FQTAP-QQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRAFA 119
Query: 133 -------DERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGV---LPYNG-FTYDHL 181
++R +Y + +A + + + V+ G+ + +NG F H
Sbjct: 120 LFKKLEHNQRFDKSNYHGTDGELAVSD--LKDLNPLSKSFVQAGMEAKISFNGDFNGAHQ 177
Query: 182 YGTKIGGTIFDQNGQRHTAA-----DLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAH 236
G + ++GQR ++A D+++ N L ++ A KVLF + +A
Sbjct: 178 EGVGF-YQVTQKHGQRWSSARAFLHDVIDRPN---LDIITEAHATKVLFEDR-----KAV 228
Query: 237 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
GV + +K E+I+S GA+ +PQLLMLSG
Sbjct: 229 GVSY---IQKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSG 266
>sp|Q6FDF9|BETA_ACIAD Choline dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betA
PE=3 SV=1
Length = 553
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 120/284 (42%), Gaps = 53/284 (18%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS------- 83
+DYIIIG G+AG LAA L+++A SVLLLE GG Y + AAL+
Sbjct: 6 FDYIIIGAGSAGNVLAARLTEDADVSVLLLEAGGPDY---RLDFRTQMPAALAYPLQGRR 62
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR--------------------- 121
+ + + + ++ + R + LGG S +N Y R
Sbjct: 63 YNWAYLTEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEGWSKLKGLENWTYA 122
Query: 122 -AAPYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDH 180
PYY + D + Y V+ P + + + +VE GV T D
Sbjct: 123 DCLPYYKKAETRD--IGGNDYHGDHGPVSVATP-KDNNNVLFHAMVEAGVQAGYPRT-DD 178
Query: 181 LYGTKIGG-----TIFDQNGQR-HTAADLLEYANPS-GLTLLLHATVHKVLFRIKGKARP 233
L G + G +NG+R TA L+ A LT++ HA +K+LF K
Sbjct: 179 LNGYQQEGFGPMDRTVTKNGRRSSTARGYLDMAKERPNLTIITHAMTNKILFNGK----- 233
Query: 234 QAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV + GA R K E+++ AGA+ SPQ+L SG
Sbjct: 234 QAIGVEY--IQGADKRDLKKVMANKEVLLCAGAIASPQILQRSG 275
>sp|B0V945|BETA_ACIBY Choline dehydrogenase OS=Acinetobacter baumannii (strain AYE)
GN=betA PE=3 SV=1
Length = 552
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 53/287 (18%)
Query: 30 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 83
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 84 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR------------------ 121
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 122 ----AAPYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFT 177
PYY + D + Y V+ P + + + +VE GV T
Sbjct: 120 TYADCLPYYKKAETRD--IGGNDYHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAGYPRT 176
Query: 178 YDHLYGTKIGG------TIFDQNGQRHTAADLLEYAN-PSGLTLLLHATVHKVLFRIKGK 230
D L G + G T+ + + TA L+ A LT+L HAT +K+LF K
Sbjct: 177 -DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFNQK-- 233
Query: 231 ARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV + GA + K E+++ AGA+ SPQ+L SG
Sbjct: 234 ---QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSG 275
>sp|B0VST3|BETA_ACIBS Choline dehydrogenase OS=Acinetobacter baumannii (strain SDF)
GN=betA PE=3 SV=1
Length = 552
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 53/287 (18%)
Query: 30 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 83
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 84 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR------------------ 121
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 122 ----AAPYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFT 177
PYY + D + Y V+ P + + + +VE GV T
Sbjct: 120 TYADCLPYYKKAETRD--IGGNDYHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAGYPRT 176
Query: 178 YDHLYGTKIGG------TIFDQNGQRHTAADLLEYAN-PSGLTLLLHATVHKVLFRIKGK 230
D L G + G T+ + + TA L+ A LT+L HAT +K+LF K
Sbjct: 177 -DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFNQK-- 233
Query: 231 ARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV + GA + K E+++ AGA+ SPQ+L SG
Sbjct: 234 ---QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSG 275
>sp|B2HV79|BETA_ACIBC Choline dehydrogenase OS=Acinetobacter baumannii (strain ACICU)
GN=betA PE=3 SV=1
Length = 552
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 53/287 (18%)
Query: 30 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 83
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 84 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR------------------ 121
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 122 ----AAPYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFT 177
PYY + D + Y V+ P + + + +VE GV T
Sbjct: 120 TYADCLPYYKKAETRD--IGGNDYHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAGYPRT 176
Query: 178 YDHLYGTKIGG------TIFDQNGQRHTAADLLEYAN-PSGLTLLLHATVHKVLFRIKGK 230
D L G + G T+ + + TA L+ A LT+L HAT +K+LF K
Sbjct: 177 -DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFNQK-- 233
Query: 231 ARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV + GA + K E+++ AGA+ SPQ+L SG
Sbjct: 234 ---QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSG 275
>sp|B7I895|BETA_ACIB5 Choline dehydrogenase OS=Acinetobacter baumannii (strain AB0057)
GN=betA PE=3 SV=1
Length = 552
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 53/287 (18%)
Query: 30 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 83
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 84 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR------------------ 121
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 122 ----AAPYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFT 177
PYY + D + Y V+ P + + + +VE GV T
Sbjct: 120 TYADCLPYYKKAETRD--IGGNDYHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAGYPRT 176
Query: 178 YDHLYGTKIGG------TIFDQNGQRHTAADLLEYAN-PSGLTLLLHATVHKVLFRIKGK 230
D L G + G T+ + + TA L+ A LT+L HAT +K+LF K
Sbjct: 177 -DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFNQK-- 233
Query: 231 ARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV + GA + K E+++ AGA+ SPQ+L SG
Sbjct: 234 ---QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSG 275
>sp|B7GYG5|BETA_ACIB3 Choline dehydrogenase OS=Acinetobacter baumannii (strain
AB307-0294) GN=betA PE=3 SV=1
Length = 552
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 53/287 (18%)
Query: 30 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 83
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 84 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTR------------------ 121
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 122 ----AAPYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFT 177
PYY + D + Y V+ P + + + +VE GV T
Sbjct: 120 TYADCLPYYKKAETRD--IGGNDYHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAGYPRT 176
Query: 178 YDHLYGTKIGG------TIFDQNGQRHTAADLLEYAN-PSGLTLLLHATVHKVLFRIKGK 230
D L G + G T+ + + TA L+ A LT+L HAT +K+LF K
Sbjct: 177 -DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFNQK-- 233
Query: 231 ARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV + GA + K E+++ AGA+ SPQ+L SG
Sbjct: 234 ---QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSG 275
>sp|Q3BXK8|BETA_XANC5 Choline dehydrogenase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=betA PE=3 SV=1
Length = 556
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 120/282 (42%), Gaps = 50/282 (17%)
Query: 33 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 83
YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA----PYYVRETG---WDER 135
+ + + + ++ + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYR 121
Query: 136 LVNESYQWVEKV-------------VAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLY 182
V ++ E V+ P + + +VE GV T D L
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGDGPVSVATPKND-NNVLFHAMVEAGVQAGYPRT-DDLN 179
Query: 183 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHATVHKVLFRIKGKARPQA 235
G + G T+ + + TA L+ A P GL ++ HAT ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRAIGV 237
Query: 236 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
H +V + G A + E++V AGA+ SPQLL SG
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSG 273
>sp|Q8NUM0|BETA_STAAW Choline dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=betA
PE=3 SV=1
Length = 569
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG E+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDAKEVILSGGAFNTPQLLQLSG 273
>sp|Q6G664|BETA_STAAS Choline dehydrogenase OS=Staphylococcus aureus (strain MSSA476)
GN=betA PE=3 SV=1
Length = 569
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 31/271 (11%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 146 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHLYGTKIGG---TIFDQNGQ 196
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 197 RHTAADLLEYANPSGLTL-----LLHATVHKVLFRIKGKARPQAHGVVFRDATGAKHRAY 251
R + G + LH + + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 252 LKNGP-----KNEIIVSAGALGSPQLLMLSG 277
KNG E+I+S GA +PQLL LSG
Sbjct: 243 KKNGKLHTIDAKEVILSGGAFNTPQLLQLSG 273
>sp|Q8PPG8|BETA_XANAC Choline dehydrogenase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=betA PE=3 SV=1
Length = 556
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 119/283 (42%), Gaps = 52/283 (18%)
Query: 33 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 83
YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDY---RVDFRTQMPAALAFPLQGRR 61
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA----PYYVRETG---WDER 135
+ + + + ++ + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYR 121
Query: 136 LVNESYQWVEKV-------------VAFEPPMRQWQSAVRDGLVEVGVL-------PYNG 175
V ++ E V+ P + + +VE GV NG
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGDGPVSVATPKND-NNVLFHAMVEAGVQAGYPRTGDLNG 180
Query: 176 FTYDHLYGTKIGGTIFDQNGQRHTAADLLEYANP-SGLTLLLHATVHKVLFRIKGKARPQ 234
+ + + T+ + + TA L+ A P GL ++ HAT ++LF GK
Sbjct: 181 YQQEGF--GPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRAIG 236
Query: 235 AHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
H +V + G A + E++V AGA+ SPQLL SG
Sbjct: 237 VHYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSG 273
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 46/278 (16%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNI-----TNLGSFGAALSDL 85
YDYII+G G+AGC LA LS + S V LLE G NP I L S L+
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLE-AGPRDTNPLIHMPLGIALLSNSKKLNWA 60
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA--APYYVRET------GW----- 132
T+P Q ++ + R + LGG S +NA Y R Y+ E GW
Sbjct: 61 FQTAPQQN-LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRALE 119
Query: 133 -------DERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGV---LPYNGFTYDHLY 182
++R + V+ +A ++ + + V+ G+ + +NG ++ Y
Sbjct: 120 LFKRLECNQRFDKSEHHGVDGELAVSD--LKYINPLSKAFVQAGMEANINFNG-DFNGEY 176
Query: 183 GTKIGG-TIFDQNGQRHTAADLLEYANPS--GLTLLLHATVHKVLFRIKGKARPQAHGVV 239
+G + +NGQR ++A + S L ++ A K+LF + +A GV
Sbjct: 177 QDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDR-----KAVGVS 231
Query: 240 FRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
+ H+ +G E+++S GA+G+P LLMLSG
Sbjct: 232 YIKKN-MHHQVKTTSG--GEVLLSLGAVGTPHLLMLSG 266
>sp|Q8P5D7|BETA_XANCP Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=betA PE=3
SV=1
Length = 556
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 33 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 83
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA------------------- 123
+ + + + + + R + LGG S +N Y R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 124 ---PYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDH 180
PY+ + D + Y E V+ P + + +V+ GV T D
Sbjct: 122 DVLPYFRKAETRD--IGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DD 177
Query: 181 LYGTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHATVHKVLFRIKGKARP 233
L G + G T+ Q + TA L+ A P L ++ HAT ++LF GK
Sbjct: 178 LNGYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAV 235
Query: 234 QAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
H +V + G A + E++V AGA+ SPQLL SG
Sbjct: 236 GVHYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSG 273
>sp|B0RNU9|BETA_XANCB Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=betA PE=3 SV=1
Length = 556
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 33 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 83
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA------------------- 123
+ + + + + + R + LGG S +N Y R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 124 ---PYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDH 180
PY+ + D + Y E V+ P + + +V+ GV T D
Sbjct: 122 DVLPYFRKAETRD--IGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DD 177
Query: 181 LYGTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHATVHKVLFRIKGKARP 233
L G + G T+ Q + TA L+ A P L ++ HAT ++LF GK
Sbjct: 178 LNGYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAV 235
Query: 234 QAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
H +V + G A + E++V AGA+ SPQLL SG
Sbjct: 236 GVHYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSG 273
>sp|Q4UYN5|BETA_XANC8 Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=betA PE=3 SV=1
Length = 556
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 33 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 83
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 84 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA------------------- 123
+ + + + + + R + LGG S +N Y R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 124 ---PYYVRETGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDH 180
PY+ + D + Y E V+ P + + +V+ GV T D
Sbjct: 122 DVLPYFRKAETRD--IGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DD 177
Query: 181 LYGTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHATVHKVLFRIKGKARP 233
L G + G T+ Q + TA L+ A P L ++ HAT ++LF GK
Sbjct: 178 LNGYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAV 235
Query: 234 QAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
H +V + G A + E++V AGA+ SPQLL SG
Sbjct: 236 GVHYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSG 273
>sp|Q9X2M2|BETA_STAXY Choline dehydrogenase OS=Staphylococcus xylosus GN=betA PE=3 SV=1
Length = 560
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 65/288 (22%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGS-----FGAALSDL 85
YDYIIIGGG+AG L LS++ S VL+LE G S Y + + + G L D
Sbjct: 5 YDYIIIGGGSAGSVLGGRLSEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNKLYDW 64
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
+ + + V ++R +VLGG S +N Y R P + W + ES+ +
Sbjct: 65 IYETTPEPHMDGRKVGHARGKVLGGSSSINGMIYQRGNPMDYEK--WAKPEGMESWDYAH 122
Query: 146 KVVAFE-----------PPMRQWQSAVR---------------DGLVEVG---VLPYNGF 176
+ F+ P R ++ D VE G NGF
Sbjct: 123 CLPYFKRLETTFGSKKGDPYRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNKTPDVNGF 182
Query: 177 TYDHLYGTKIGGTIFD---QNGQRHTAADLLEYANPS----GLTLLLHATVHKVLFRIKG 229
+ G FD NG+R +A+ Y +P+ L + A V K+ F
Sbjct: 183 RQE-------GFGPFDSQVHNGRRVSAS--RAYLHPAMKRKNLEVQTRAFVTKLNFEGN- 232
Query: 230 KARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
+ GV F+ G +H K E+I+S GA+ SPQLL LSG
Sbjct: 233 ----KVTGVTFK-KNGKEHTESAK-----EVILSGGAINSPQLLQLSG 270
>sp|Q6LGH5|BETA_PHOPR Choline dehydrogenase OS=Photobacterium profundum GN=betA PE=3 SV=1
Length = 568
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 118/284 (41%), Gaps = 59/284 (20%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSFGAALS-DLSSTS 89
YDYII+G G+AGC LA LS + +LLLE GGS + + ALS ++S
Sbjct: 5 YDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGS-----DRSIFIQMPTALSYPMNSEK 59
Query: 90 PSQRFISE-DGVINSRA------RVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQ 142
+ +F ++ + ++SR+ RVLGG S +N Y R +DE + +
Sbjct: 60 YAWQFETQPEAGLDSRSLHCPRGRVLGGSSSINGMVYVRG-----HACDYDEWVEQGAEG 114
Query: 143 W-VEKVVAFEPPMRQW---QSAVRDGLVEVGVLPYNGFTYDHLYGTKIGG-------TIF 191
W ++ + + W + R G VG N + LY I
Sbjct: 115 WSYQECLPYFRRAESWIHGEDTYRGGDGPVGTCNGNDMELNPLYQAFIDAGQQAGYPKTD 174
Query: 192 DQNGQR-------HTAAD-----------LLEYANPSGLTLLLHATVHKVLFRIKGKARP 233
D NG + H D L S LT+ KVL + K
Sbjct: 175 DYNGYQQEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLIKNK----- 229
Query: 234 QAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
QA GV G K ++ N E+++SAG++GSPQLL LSG
Sbjct: 230 QAIGVEIE--VGGKVQSVYAN---TEVLLSAGSVGSPQLLQLSG 268
>sp|Q8CMY2|BETA_STAES Choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=betA PE=3 SV=1
Length = 572
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 49/281 (17%)
Query: 33 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L A LS+ + +VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGARLSEDKDKNVLVLEAGRSDYFWDLFIQMPAALMFPSGNRFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
+ + + V ++R +VLGG S +N Y R P + GW E +++ +
Sbjct: 68 EYQTDEEPHMGRR-VDHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMDTWDFAH 124
Query: 146 KVVAFEPPMRQWQSA----VR--DGLVEVGVLPYNGFTYDHLYGTKI------------- 186
+ F+ + +A VR DG +++ P + + +
Sbjct: 125 CLPYFKKLETTYGAAPYDKVRGHDGPIKLKRGPATNPLFKSFFNAGVEAGYHKTADVNGY 184
Query: 187 ---GGTIFD---QNGQRHTAADLLEYANPS----GLTLLLHATVHKVLFRIKGKARPQAH 236
G FD +G+R +A+ Y P+ L + A V K++F +
Sbjct: 185 RQEGFGPFDSQVHHGRRMSAS--RAYLRPALRRRNLDVETRAFVTKLIFDENNSKK--VT 240
Query: 237 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
GV F+ G +H + NE+I+S GA +PQLL LSG
Sbjct: 241 GVTFK-KNGKEHTVHA-----NEVILSGGAFNTPQLLQLSG 275
>sp|Q5HL11|BETA_STAEQ Choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=betA PE=3 SV=1
Length = 572
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 49/281 (17%)
Query: 33 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF-----GAALSDL 85
YDY+IIGGG+AG L A LS+ + +VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGARLSEDKDKNVLVLEAGRSDYFWDLFIQMPAALMFPSGNRFYDW 67
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQWVE 145
+ + + V ++R +VLGG S +N Y R P + GW E +++ +
Sbjct: 68 EYQTDEEPHMGRR-VDHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMDTWDFAH 124
Query: 146 KVVAFEPPMRQWQSA----VR--DGLVEVGVLPYNGFTYDHLYGTKI------------- 186
+ F+ + +A VR DG +++ P + + +
Sbjct: 125 CLPYFKKLETTYGAAPYDKVRGHDGPIKLKRGPATNPLFKSFFNAGVEAGYHKTADVNGY 184
Query: 187 ---GGTIFD---QNGQRHTAADLLEYANPS----GLTLLLHATVHKVLFRIKGKARPQAH 236
G FD +G+R +A+ Y P+ L + A V K++F +
Sbjct: 185 RQEGFGPFDSQVHHGRRMSAS--RAYLRPALRRRNLDVETRAFVTKLIFDENNSKK--VT 240
Query: 237 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
GV F+ G +H + NE+I+S GA +PQLL LSG
Sbjct: 241 GVTFK-KNGKEHTVHA-----NEVILSGGAFNTPQLLQLSG 275
>sp|Q4A0Q1|BETA_STAS1 Choline dehydrogenase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=betA
PE=3 SV=1
Length = 560
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 117/286 (40%), Gaps = 61/286 (21%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGS-----FGAALSDL 85
YDYIIIGGG+AG L + +S++ S VL+LE G S Y + + + G L D
Sbjct: 5 YDYIIIGGGSAGSVLGSRISEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNKLYDW 64
Query: 86 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPY----YVRETG---WDERLVN 138
+ + + V ++R +VLGG S +N Y R P + + G WD
Sbjct: 65 IYETTPEPHMDGRKVGHARGKVLGGSSSINGMIYQRGNPMDYEKWAKPEGMDSWDYAHCL 124
Query: 139 ESYQWVEKVVAFE-----------------PPMRQWQSAVRDGLVEVG---VLPYNGFTY 178
++ +EK P A D VE G NGF
Sbjct: 125 PYFKRLEKTFGATKDDQFRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNKTPDVNGFRQ 184
Query: 179 DHLYGTKIGGTIFD---QNGQRHTAADLLEYANPS----GLTLLLHATVHKVLFRIKGKA 231
+ G FD NG+R +A+ Y +P+ L + A V K+ F
Sbjct: 185 E-------GFGPFDSQVHNGRRVSAS--RAYLHPAMKRKNLEVQTRAFVTKLNFEGN--- 232
Query: 232 RPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
+ GV F+ G +H K E+I+S GA+ SPQLL LSG
Sbjct: 233 --KVTGVTFK-KNGREHTVNAK-----EVILSGGAINSPQLLQLSG 270
>sp|P81156|GOX_PENAG Glucose oxidase OS=Penicillium amagasakiense PE=1 SV=1
Length = 587
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 120/299 (40%), Gaps = 71/299 (23%)
Query: 33 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERG------GSPYGNPNITNLGSFGAALSD 84
YDYII GGG G +AA L++N VL++E+G G+ +PN A
Sbjct: 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPN---------AYGQ 75
Query: 85 LSSTSPSQRFISEDGVINSRA------RVLGGGSCLNAGFYTRAAPYYVRETGWDERLVN 138
+ T+ Q +++ +IN+R + LGG + +N +TR P V+ W++
Sbjct: 76 IFGTTVDQNYLTVP-LINNRTNNIKAGKGLGGSTLINGDSWTR--PDKVQIDSWEKVFGM 132
Query: 139 ESYQW------VEKVVAFEPPMRQW------------------QSAVRDG---------- 164
E + W ++K A P QS RD
Sbjct: 133 EGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKA 192
Query: 165 ----LVEVGVLPYNGFTYDHLYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHA 218
+ +GV F H G + D+N R AA LL S L +L
Sbjct: 193 LMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQ 252
Query: 219 TVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
V KVLF+ + + PQA GV F G K+E++++AG+ SP +L SG
Sbjct: 253 MVGKVLFK-QTASGPQAVGVNF----GTNKAVNFDVFAKHEVLLAAGSAISPLILEYSG 306
>sp|A7N2P9|BETA_VIBHB Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=betA PE=3 SV=1
Length = 569
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 116/285 (40%), Gaps = 59/285 (20%)
Query: 32 YYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-DLSST 88
+YDYII+G G+AGC LA LS++ VLLLE GGS + + ALS +++
Sbjct: 4 HYDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGGS-----DKSIFIQMPTALSYPMNTE 58
Query: 89 SPSQRF--ISEDGVINS-----RARVLGGGSCLNAGFYTRAAPYYVRETGWDERLVNESY 141
+ +F ++E+G+ R +VLGG S +N Y R +DE +
Sbjct: 59 KYAWQFETVAEEGLDGRQLHCPRGKVLGGSSSINGMVYVRG-----HACDFDEWEAEGAK 113
Query: 142 QW-VEKVVAFEPPMRQWQSAV---RDGLVEVGVLPYNGFTYDHLYGTKIGG-------TI 190
W + + + W R G VG N + LY I
Sbjct: 114 GWNYQACLPYFRKAETWTGGADEYRGGSGPVGTCNGNDMKLNPLYQAFIEAGKDAGYPET 173
Query: 191 FDQNGQR-------HTAAD-----------LLEYANPSGLTLLLHATVHKVLFRIKGKAR 232
D NG + H D L S TL+ T H++L K
Sbjct: 174 QDYNGYQQEGFGPMHMTVDKGVRASTSNAYLSRAKKRSNFTLMKGVTAHRILLEGK---- 229
Query: 233 PQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
+A G+ F + +G + + E++ SAG++GS QLL LSG
Sbjct: 230 -KAVGIEF-EQSGEIKQCF----ANKEVVSSAGSIGSVQLLQLSG 268
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 120/285 (42%), Gaps = 57/285 (20%)
Query: 31 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAALS-DLSS 87
+YDYII+G G+AGC LA LS+ + SVLLLE GGS + + ALS ++S
Sbjct: 3 QHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGS-----DKSIFIQMPTALSYPMNS 57
Query: 88 TSPSQRFISE-----DG--VINSRARVLGGGSCLNAGFYTRAAPYYVRE------TGWDE 134
+ +F ++ DG + R +VLGG S +N Y R E GW+
Sbjct: 58 EKYAWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNY 117
Query: 135 RLVNESYQWVEKVVAFEPPMRQWQ-----------------SAVRDGLVEVG---VLPYN 174
+ ++ E + E R A D E G YN
Sbjct: 118 QACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYN 177
Query: 175 GFTYDHLYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHATVHKVLFRIKGKAR 232
G+ + + T+ +NG R + ++ L S L+ V ++L K
Sbjct: 178 GYQQEGFGPMHM--TV--KNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK---- 229
Query: 233 PQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
+A GV F + G + KNE+I SAG++GS QLL LSG
Sbjct: 230 -RAVGVEF-ELAGELRTCFA----KNEVISSAGSIGSVQLLQLSG 268
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 120/285 (42%), Gaps = 57/285 (20%)
Query: 31 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAALS-DLSS 87
+YDYII+G G+AGC LA LS+ + SVLLLE GGS + + ALS ++S
Sbjct: 3 QHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGS-----DKSIFIQMPTALSYPMNS 57
Query: 88 TSPSQRFISE-----DG--VINSRARVLGGGSCLNAGFYTRAAPYYVRE------TGWDE 134
+ +F ++ DG + R +VLGG S +N Y R E GW+
Sbjct: 58 EKYAWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNY 117
Query: 135 RLVNESYQWVEKVVAFEPPMRQWQ-----------------SAVRDGLVEVG---VLPYN 174
+ ++ E + E R A D E G YN
Sbjct: 118 QACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYN 177
Query: 175 GFTYDHLYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHATVHKVLFRIKGKAR 232
G+ + + T+ +NG R + ++ L S L+ V ++L K
Sbjct: 178 GYQQEGFGPMHM--TV--KNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK---- 229
Query: 233 PQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
+A GV F + G + KNE+I SAG++GS QLL LSG
Sbjct: 230 -RAVGVEF-ELAGELRTCFA----KNEVISSAGSIGSVQLLQLSG 268
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 114/281 (40%), Gaps = 48/281 (17%)
Query: 33 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERG------GSPYGNPNITNLGSFGAALSD 84
Y Y+++G G+AGC LA L+++ + VLLLE G GS + I + A L D
Sbjct: 41 YSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLCD 100
Query: 85 ----LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVR-----ETGWDE 134
+ QR + + R RV GG S LNA Y R A Y R GWD
Sbjct: 101 DRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWD- 159
Query: 135 RLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHLYGTKIGGTI---- 190
+ K E +++ A DG + V G T L+ + T
Sbjct: 160 --YAHCLPYFRKAQGHELGASRYRGA--DGPLRVS----RGKTNHPLHCAFLEATQQAGY 211
Query: 191 --------FDQNGQRHTAADLLEYANPSGLTLLLHATVHKVLFRIKGKARPQAHGVVFRD 242
F Q G + E S LH + + +K +A V+F +
Sbjct: 212 PLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRT--NLKAEAETLVSRVLF-E 268
Query: 243 ATGAKHRAYLKNGPKN------EIIVSAGALGSPQLLMLSG 277
T A Y+KNG + E+I+S GA+ SPQLLMLSG
Sbjct: 269 GTRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSG 309
>sp|P13006|GOX_ASPNG Glucose oxidase OS=Aspergillus niger GN=gox PE=1 SV=1
Length = 605
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 72/299 (24%)
Query: 34 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGG--SPYGNPNITNLGSFGAALSDLSSTS 89
DYII GGG G AA L++N SVL++E G S G P I +L ++G D+ +S
Sbjct: 43 DYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRG-PIIEDLNAYG----DIFGSS 97
Query: 90 PSQRFISEDGVINSRARV------LGGGSCLNAGFYTRAAPYYVRETGWDERLVNESYQW 143
+ + + N++ + LGG + +N G +TR P+ + W+ NE + W
Sbjct: 98 VDHAYETVELATNNQTALIRSGNGLGGSTLVNGGTWTR--PHKAQVDSWETVFGNEGWNW 155
Query: 144 -----------------VEKVVA-------------------------FEPPMRQWQSAV 161
+++ A + P ++ SAV
Sbjct: 156 DNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIVKALMSAV 215
Query: 162 RDGLVEVGVLPYNGFTYDHLYGTKIGGTIFDQNGQRHTAAD---LLEYANPSGLTLLLHA 218
D GV F +G + ++ R AA L Y P+ L +L
Sbjct: 216 ED----RGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPN-LQVLTGQ 270
Query: 219 TVHKVLFRIKGKARPQAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 277
V KVL G P+A GV F G H Y K+E++++AG+ SP +L SG
Sbjct: 271 YVGKVLLSQNGTT-PRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSG 324
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,436,761
Number of Sequences: 539616
Number of extensions: 4807906
Number of successful extensions: 12717
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 12315
Number of HSP's gapped (non-prelim): 381
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)