Query 045701
Match_columns 653
No_of_seqs 126 out of 149
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 07:42:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ndz_E Endoglucanase D; cellot 95.4 0.039 1.3E-06 48.9 7.5 54 218-272 3-56 (107)
2 3icg_A Endoglucanase D; cellul 93.3 0.16 5.4E-06 54.2 7.8 58 214-272 379-436 (515)
3 1exg_A EXO-1,4-beta-D-glycanas 92.9 0.19 6.4E-06 44.4 6.3 56 215-272 5-60 (110)
4 1e5b_A Xylanase D; hydrolase, 92.1 0.044 1.5E-06 47.0 1.3 48 219-272 4-51 (87)
5 2cwr_A Chitinase; chitin-bindi 91.3 0.53 1.8E-05 41.5 7.3 48 220-272 12-59 (103)
6 1heh_C Endo-1,4-beta-xylanase 85.0 0.26 9E-06 42.3 1.1 51 216-272 2-52 (88)
7 3ndz_E Endoglucanase D; cellot 83.4 1.1 3.8E-05 39.6 4.4 40 73-112 16-55 (107)
8 1exg_A EXO-1,4-beta-D-glycanas 83.0 1.1 3.7E-05 39.5 4.2 39 73-111 20-58 (110)
9 3icg_A Endoglucanase D; cellul 63.6 8.9 0.0003 40.8 6.0 40 73-112 396-435 (515)
10 2cwr_A Chitinase; chitin-bindi 26.4 64 0.0022 28.2 4.2 36 73-111 22-57 (103)
No 1
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=95.41 E-value=0.039 Score=48.90 Aligned_cols=54 Identities=22% Similarity=0.423 Sum_probs=46.5
Q ss_pred eEEEEEEEEeeCCCeEEEEEEecCCccCCCCCCeeeeeEcCCeeeEEecCcEEee
Q 045701 218 LSISYDVTQSYANNYLAQVTLENKSPLGRLDHWNLTWEWMRGEFIYTMKGAYTRN 272 (653)
Q Consensus 218 iTI~wDV~q~~~dgY~A~VTi~N~q~yrhIdgW~L~W~W~k~E~IwsM~GA~~te 272 (653)
.++.|.|.+--.+||.|.|||.|.-- .-|++|+|+|++..++-|-++..|..+.
T Consensus 3 c~v~y~v~~~W~~Gf~~~vtVtN~g~-~~i~gWtv~~~~p~g~~it~~Wna~~s~ 56 (107)
T 3ndz_E 3 VEVTYAITNSWGSGASVNVTIKNNGT-TPINGWTLKWTMPINQTITNMWSASFVA 56 (107)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEECSS-SCEESCEEEEECCTTEEEEEEESEEEEE
T ss_pred cEEEEEEcccCCCCEEEEEEEEeCCC-CcccCcEEEEEcCCCCEEecccceEEEe
Confidence 47899998888999999999999743 3478999999999999999999997654
No 2
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=93.34 E-value=0.16 Score=54.17 Aligned_cols=58 Identities=21% Similarity=0.398 Sum_probs=50.2
Q ss_pred CCCCeEEEEEEEEeeCCCeEEEEEEecCCccCCCCCCeeeeeEcCCeeeEEecCcEEee
Q 045701 214 QNGDLSISYDVTQSYANNYLAQVTLENKSPLGRLDHWNLTWEWMRGEFIYTMKGAYTRN 272 (653)
Q Consensus 214 ~~GniTI~wDV~q~~~dgY~A~VTi~N~q~yrhIdgW~L~W~W~k~E~IwsM~GA~~te 272 (653)
+.|-.+++|.|.+.-.+||.|.|||.|.-- .-|+||+|+|++..++-|-++..|..+.
T Consensus 379 ~~~~~~~~~~~~~~W~~g~~~~v~v~n~~~-~~~~~W~~~~~~~~~~~i~~~wn~~~~~ 436 (515)
T 3icg_A 379 PQSAVEVTYAITNSWGSGASVNVTIKNNGT-TPINGWTLKWTMPINQTITNMWSASFVA 436 (515)
T ss_dssp --CCEEEEEEEEEECSSEEEEEEEEEECSS-SCEESCEEEEECCTTEEEEEEESEEEEE
T ss_pred CCCceEEEEEEecCCCCccEEEEEEEeCCC-CCcCCeEEEEEeCCCCEeeccccceEEe
Confidence 467799999999999999999999999754 3578999999999999999999998764
No 3
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=92.86 E-value=0.19 Score=44.36 Aligned_cols=56 Identities=18% Similarity=0.388 Sum_probs=46.9
Q ss_pred CCCeEEEEEEEEeeCCCeEEEEEEecCCccCCCCCCeeeeeEcCCeeeEEecCcEEee
Q 045701 215 NGDLSISYDVTQSYANNYLAQVTLENKSPLGRLDHWNLTWEWMRGEFIYTMKGAYTRN 272 (653)
Q Consensus 215 ~GniTI~wDV~q~~~dgY~A~VTi~N~q~yrhIdgW~L~W~W~k~E~IwsM~GA~~te 272 (653)
.|..+++|. .+.-.+||.|.|||.|.-- .-|++|+|.|++..++-|-++..|..+.
T Consensus 5 ~~~c~v~y~-~~~W~~Gf~~~vtVtN~g~-~~i~gWtv~~~~~~g~~i~~~Wna~~s~ 60 (110)
T 1exg_A 5 PAGCQVLWG-VNQWNTGFTANVTVKNTSS-APVDGWTLTFSFPSGQQVTQAWSSTVTQ 60 (110)
T ss_dssp CCCEEEECC-EEESSSEEEEEEEEEECSS-SCEESEEEEEECSSSCEEEEEESSEEEE
T ss_pred CCcEEEEEE-eCCCCCCEEEEEEEEeCCC-CcccceEEEEEcCCCcEEecccceEEEc
Confidence 467899998 6777899999999999643 3478999999999998898998887654
No 4
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=92.08 E-value=0.044 Score=46.96 Aligned_cols=48 Identities=8% Similarity=0.192 Sum_probs=40.2
Q ss_pred EEEEEEEEeeCCCeEEEEEEecCCccCCCCCCeeeeeEcCCeeeEEecCcEEee
Q 045701 219 SISYDVTQSYANNYLAQVTLENKSPLGRLDHWNLTWEWMRGEFIYTMKGAYTRN 272 (653)
Q Consensus 219 TI~wDV~q~~~dgY~A~VTi~N~q~yrhIdgW~L~W~W~k~E~IwsM~GA~~te 272 (653)
+..|.|.+.-.+||.|.|+|.| +++|+|.|++..++=|-++..|..+.
T Consensus 4 ta~y~v~~~W~~Gf~~~vtVtn------~~gWtv~~~~~~g~~i~~~Wn~~~s~ 51 (87)
T 1e5b_A 4 SVTATRAEEWSDGFNVTYSVSG------SSAWTVNLALNGSQTIQASWNANVTG 51 (87)
T ss_dssp CCBCCBCCCCSSEEEEEEBCCS------CSSCCCEEECCTTCCEEEEESBCCEE
T ss_pred EEEEEECccCCCCEEEEEEEEc------cCceEEEEEcCCCCEEeeeeceeEec
Confidence 4567776667799999999998 69999999999999888888887653
No 5
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=91.28 E-value=0.53 Score=41.46 Aligned_cols=48 Identities=13% Similarity=0.195 Sum_probs=40.2
Q ss_pred EEEEEEEeeCCCeEEEEEEecCCccCCCCCCeeeeeEcCCeeeEEecCcEEee
Q 045701 220 ISYDVTQSYANNYLAQVTLENKSPLGRLDHWNLTWEWMRGEFIYTMKGAYTRN 272 (653)
Q Consensus 220 I~wDV~q~~~dgY~A~VTi~N~q~yrhIdgW~L~W~W~k~E~IwsM~GA~~te 272 (653)
.+|. .+-=.+||.|.|||.|.- +++|+|.|++..++=|-++..|..+.
T Consensus 12 c~y~-~n~W~~Gf~~~vtVtN~g----~~gWtv~~~~~~g~~it~~Wna~~s~ 59 (103)
T 2cwr_A 12 LEVK-VNDWGSGAEYDVTLNLDG----QYDWTVKVKLAPGATVGSFWSANKQE 59 (103)
T ss_dssp EEEE-EEECSSEEEEEEEEEESS----CCCCEEEEEECTTCEEEEEESEEEEE
T ss_pred EEEE-ECCCCCceEEEEEEeCCC----CCcEEEEEECCCCcEEecccceEEec
Confidence 3676 455578999999999983 48999999999999999999998765
No 6
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=84.98 E-value=0.26 Score=42.29 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=41.0
Q ss_pred CCeEEEEEEEEeeCCCeEEEEEEecCCccCCCCCCeeeeeEcCCeeeEEecCcEEee
Q 045701 216 GDLSISYDVTQSYANNYLAQVTLENKSPLGRLDHWNLTWEWMRGEFIYTMKGAYTRN 272 (653)
Q Consensus 216 GniTI~wDV~q~~~dgY~A~VTi~N~q~yrhIdgW~L~W~W~k~E~IwsM~GA~~te 272 (653)
|--+.+|.|.+.-.+||.|.|||. + .++|+|.|++..++=|-++..|..+.
T Consensus 2 g~Ctaty~~~n~W~~Gf~a~vtVt-----g-~~gWtv~~~~~~gq~vt~~Wna~~s~ 52 (88)
T 1heh_C 2 GSCSVSAVRGEEWADRFNVTYSVS-----G-SSSWVVTLGLNGGQSVQSSWNAALTG 52 (88)
T ss_dssp CCCCCCCCCCSBCSSEEEEEEECS-----S-CCSCCCEEECCSSCCCCCEESSEEEC
T ss_pred CceEEEEEEcccCCCceEEEEEEe-----c-cccEEEEEECCCCCEEEccccccCcc
Confidence 344566777666679999999998 3 48999999999999898888887653
No 7
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=83.35 E-value=1.1 Score=39.58 Aligned_cols=40 Identities=13% Similarity=0.249 Sum_probs=34.8
Q ss_pred eeEeeeEEeccCcccccceEEEeeeeccEEEEecCCeeec
Q 045701 73 TFNATATVVNTGADELKAWKIFIGFQHKEILVSASGAVSL 112 (653)
Q Consensus 73 ~F~a~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl~ 112 (653)
.|.++++|+|+|.+.|.+|++-+.|.-.+-+.++=+|.+.
T Consensus 16 Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s 55 (107)
T 3ndz_E 16 GASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFV 55 (107)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEE
T ss_pred CEEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEE
Confidence 4999999999999999999999999877777777776653
No 8
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=82.96 E-value=1.1 Score=39.51 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=32.7
Q ss_pred eeEeeeEEeccCcccccceEEEeeeeccEEEEecCCeee
Q 045701 73 TFNATATVVNTGADELKAWKIFIGFQHKEILVSASGAVS 111 (653)
Q Consensus 73 ~F~a~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl 111 (653)
.|.+.++|+|+|.+.|.+|++-+.|...+-+.++=++.+
T Consensus 20 Gf~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~ 58 (110)
T 1exg_A 20 GFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTV 58 (110)
T ss_dssp EEEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEE
T ss_pred CEEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEE
Confidence 499999999999999999999999998765666655544
No 9
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=63.62 E-value=8.9 Score=40.83 Aligned_cols=40 Identities=13% Similarity=0.249 Sum_probs=35.3
Q ss_pred eeEeeeEEeccCcccccceEEEeeeeccEEEEecCCeeec
Q 045701 73 TFNATATVVNTGADELKAWKIFIGFQHKEILVSASGAVSL 112 (653)
Q Consensus 73 ~F~a~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl~ 112 (653)
.|.+++||+|+|...|.+|++-+.|.-.+-+.++=+|.++
T Consensus 396 g~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~ 435 (515)
T 3icg_A 396 GASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFV 435 (515)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEE
T ss_pred ccEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEE
Confidence 4999999999999999999999999877778888777664
No 10
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=26.39 E-value=64 Score=28.22 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=27.5
Q ss_pred eeEeeeEEeccCcccccceEEEeeeeccEEEEecCCeee
Q 045701 73 TFNATATVVNTGADELKAWKIFIGFQHKEILVSASGAVS 111 (653)
Q Consensus 73 ~F~a~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl 111 (653)
.|.+.++|.|.|. .+|++-+.|.-.+-+-++=+|-+
T Consensus 22 Gf~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~ 57 (103)
T 2cwr_A 22 GAEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANK 57 (103)
T ss_dssp EEEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEE
T ss_pred ceEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEE
Confidence 4899999999986 79999999986655555444433
Done!