Query 045703
Match_columns 247
No_of_seqs 117 out of 1111
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 04:41:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045703.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045703hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 5.4E-49 1.2E-53 351.8 22.0 221 1-227 126-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 1.7E-48 3.7E-53 344.7 21.8 218 2-227 98-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 8.4E-43 1.8E-47 303.7 16.1 197 2-226 84-280 (281)
4 cd01846 fatty_acyltransferase_ 100.0 1.1E-38 2.4E-43 275.7 18.8 190 2-225 80-269 (270)
5 PRK15381 pathogenicity island 100.0 1E-38 2.2E-43 288.0 18.4 180 2-227 222-401 (408)
6 COG3240 Phospholipase/lecithin 100.0 1.2E-29 2.7E-34 221.6 11.2 200 3-227 133-333 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 6E-20 1.3E-24 153.6 12.6 147 30-223 80-234 (234)
8 cd01833 XynB_like SGNH_hydrola 99.1 2E-09 4.4E-14 85.2 12.1 117 31-226 39-156 (157)
9 cd01834 SGNH_hydrolase_like_2 99.1 2.3E-09 5E-14 87.0 11.9 129 33-226 62-191 (191)
10 cd01841 NnaC_like NnaC (CMP-Ne 99.0 2.3E-09 4.9E-14 86.3 10.8 121 32-225 51-172 (174)
11 cd00229 SGNH_hydrolase SGNH_hy 99.0 6E-09 1.3E-13 82.2 12.4 124 29-225 62-186 (187)
12 cd01836 FeeA_FeeB_like SGNH_hy 99.0 4E-09 8.6E-14 86.2 11.5 123 31-227 66-189 (191)
13 cd01839 SGNH_arylesterase_like 99.0 2.7E-09 5.9E-14 88.5 10.2 122 31-227 78-205 (208)
14 cd01830 XynE_like SGNH_hydrola 99.0 5.3E-09 1.1E-13 86.7 11.7 127 33-224 75-201 (204)
15 cd01838 Isoamyl_acetate_hydrol 99.0 7.6E-09 1.6E-13 84.5 11.3 134 32-226 63-198 (199)
16 cd04501 SGNH_hydrolase_like_4 99.0 3E-08 6.6E-13 80.4 14.3 124 32-226 59-182 (183)
17 cd01829 SGNH_hydrolase_peri2 S 99.0 9.4E-09 2E-13 84.5 11.3 141 31-227 58-198 (200)
18 cd01828 sialate_O-acetylestera 98.9 9.7E-09 2.1E-13 82.3 11.0 119 32-227 48-168 (169)
19 cd04506 SGNH_hydrolase_YpmR_li 98.9 1.5E-08 3.3E-13 83.7 11.6 133 32-225 68-203 (204)
20 cd01823 SEST_like SEST_like. A 98.9 1.3E-08 2.9E-13 87.2 11.6 162 31-225 79-258 (259)
21 cd04502 SGNH_hydrolase_like_7 98.9 2.7E-08 5.8E-13 80.0 12.0 119 32-225 50-169 (171)
22 cd01820 PAF_acetylesterase_lik 98.9 2.4E-08 5.2E-13 83.4 11.1 121 32-227 89-210 (214)
23 cd01824 Phospholipase_B_like P 98.9 6.6E-08 1.4E-12 84.6 13.7 149 33-227 120-283 (288)
24 cd01832 SGNH_hydrolase_like_1 98.8 3.9E-08 8.4E-13 79.8 10.7 117 32-225 67-184 (185)
25 cd01821 Rhamnogalacturan_acety 98.8 5.1E-08 1.1E-12 80.3 10.4 132 32-226 65-197 (198)
26 PF13472 Lipase_GDSL_2: GDSL-l 98.8 5.1E-08 1.1E-12 77.3 9.7 121 30-219 59-179 (179)
27 cd01827 sialate_O-acetylestera 98.7 1.6E-07 3.5E-12 76.4 11.8 120 32-227 67-187 (188)
28 cd01844 SGNH_hydrolase_like_6 98.7 3E-07 6.5E-12 74.4 13.0 120 31-226 56-176 (177)
29 PRK10528 multifunctional acyl- 98.7 1.1E-07 2.4E-12 78.1 10.4 112 32-227 71-183 (191)
30 cd01835 SGNH_hydrolase_like_3 98.7 1.5E-07 3.3E-12 77.0 10.0 123 32-225 69-191 (193)
31 cd01825 SGNH_hydrolase_peri1 S 98.7 1.3E-07 2.9E-12 76.7 9.2 130 31-227 55-185 (189)
32 cd01840 SGNH_hydrolase_yrhL_li 98.6 6.7E-07 1.5E-11 70.6 11.8 24 203-226 126-149 (150)
33 cd01822 Lysophospholipase_L1_l 98.6 5.7E-07 1.2E-11 72.2 10.3 113 32-227 64-176 (177)
34 cd01826 acyloxyacyl_hydrolase_ 98.5 2.1E-06 4.6E-11 74.9 12.5 56 33-97 123-180 (305)
35 cd01831 Endoglucanase_E_like E 98.5 3.2E-06 6.9E-11 67.9 12.1 47 33-93 56-103 (169)
36 KOG3035 Isoamyl acetate-hydrol 98.2 1.4E-05 3.1E-10 65.9 9.5 140 32-227 68-208 (245)
37 COG2755 TesA Lysophospholipase 97.9 0.00015 3.3E-09 60.2 11.6 22 206-227 187-208 (216)
38 COG2845 Uncharacterized protei 97.0 0.0089 1.9E-07 52.5 10.6 138 30-226 175-316 (354)
39 PF14606 Lipase_GDSL_3: GDSL-l 96.7 0.0065 1.4E-07 49.4 6.7 117 32-226 59-176 (178)
40 KOG3670 Phospholipase [Lipid t 96.4 0.15 3.2E-06 46.2 14.2 28 200-227 323-350 (397)
41 cd01842 SGNH_hydrolase_like_5 95.2 0.23 4.9E-06 40.3 9.5 20 206-225 161-180 (183)
42 PF08885 GSCFA: GSCFA family; 89.9 2.1 4.6E-05 36.8 8.3 139 30-222 99-250 (251)
43 PLN02757 sirohydrochlorine fer 82.9 3.6 7.9E-05 32.6 5.6 62 74-158 60-124 (154)
44 cd03416 CbiX_SirB_N Sirohydroc 73.7 6.7 0.00015 28.2 4.3 53 74-149 46-98 (101)
45 PF02633 Creatininase: Creatin 68.5 14 0.00031 31.1 5.8 83 38-157 62-144 (237)
46 COG0113 HemB Delta-aminolevuli 66.6 16 0.00034 32.3 5.6 30 67-96 56-85 (330)
47 PF01903 CbiX: CbiX; InterPro 66.0 3.3 7.1E-05 30.0 1.2 53 75-150 40-92 (105)
48 cd00384 ALAD_PBGS Porphobilino 63.9 28 0.0006 30.8 6.6 65 68-150 47-111 (314)
49 PRK13384 delta-aminolevulinic 62.0 21 0.00045 31.7 5.6 65 68-150 57-121 (322)
50 PRK09283 delta-aminolevulinic 61.0 37 0.0008 30.2 7.0 65 68-150 55-119 (323)
51 COG3240 Phospholipase/lecithin 60.7 4.7 0.0001 36.5 1.4 70 30-105 96-165 (370)
52 cd04823 ALAD_PBGS_aspartate_ri 59.8 23 0.00051 31.4 5.5 66 68-150 50-116 (320)
53 cd04824 eu_ALAD_PBGS_cysteine_ 59.3 23 0.0005 31.4 5.4 28 69-96 48-75 (320)
54 cd03414 CbiX_SirB_C Sirohydroc 59.2 41 0.00089 24.6 6.2 49 74-147 47-95 (117)
55 PF13839 PC-Esterase: GDSL/SGN 59.1 1E+02 0.0023 25.6 9.6 114 32-157 100-220 (263)
56 PF00490 ALAD: Delta-aminolevu 58.3 40 0.00087 30.0 6.7 66 69-150 54-119 (324)
57 PRK13660 hypothetical protein; 54.6 75 0.0016 25.9 7.3 59 66-152 23-81 (182)
58 PF06908 DUF1273: Protein of u 51.4 34 0.00073 27.8 4.9 27 66-92 23-49 (177)
59 KOG2794 Delta-aminolevulinic a 46.1 37 0.00079 29.6 4.4 95 30-150 37-131 (340)
60 cd03412 CbiK_N Anaerobic cobal 44.8 89 0.0019 23.6 6.1 21 72-92 56-76 (127)
61 PF02896 PEP-utilizers_C: PEP- 38.7 55 0.0012 28.8 4.5 16 32-47 195-210 (293)
62 PF07318 DUF1464: Protein of u 37.7 1.3E+02 0.0028 27.1 6.8 73 74-151 90-162 (343)
63 PF04311 DUF459: Protein of un 37.5 1.4E+02 0.0029 26.9 6.9 25 203-227 296-320 (327)
64 PF08331 DUF1730: Domain of un 35.5 96 0.0021 21.2 4.6 15 84-98 9-23 (78)
65 TIGR03455 HisG_C-term ATP phos 35.2 51 0.0011 24.0 3.2 23 71-93 73-95 (100)
66 PF04914 DltD_C: DltD C-termin 34.1 37 0.00081 26.1 2.4 26 200-225 100-125 (130)
67 PF08029 HisG_C: HisG, C-termi 33.8 37 0.00081 23.4 2.2 21 74-94 52-72 (75)
68 KOG4175 Tryptophan synthase al 33.2 1.2E+02 0.0026 25.4 5.3 23 75-97 113-135 (268)
69 PRK00923 sirohydrochlorin coba 30.9 57 0.0012 24.3 3.0 25 74-106 48-72 (126)
70 PLN02825 amino-acid N-acetyltr 30.6 4.4E+02 0.0096 25.2 9.5 58 8-96 2-59 (515)
71 PF06812 ImpA-rel_N: ImpA-rela 28.7 22 0.00049 23.3 0.4 8 205-212 53-60 (62)
72 TIGR01417 PTS_I_fam phosphoeno 28.5 84 0.0018 30.4 4.3 14 34-47 444-457 (565)
73 COG1080 PtsA Phosphoenolpyruva 27.6 18 0.00039 34.7 -0.3 22 29-52 441-462 (574)
74 PRK13717 conjugal transfer pro 27.1 1.1E+02 0.0024 23.4 3.9 26 115-140 70-95 (128)
75 PF11691 DUF3288: Protein of u 25.9 60 0.0013 23.3 2.1 35 207-246 2-38 (90)
76 COG1031 Uncharacterized Fe-S o 24.1 3.2E+02 0.0069 25.9 6.9 25 71-95 217-241 (560)
77 COG1402 Uncharacterized protei 24.0 1.1E+02 0.0024 26.3 3.8 26 68-93 86-111 (250)
78 PF12872 OST-HTH: OST-HTH/LOTU 23.0 1.5E+02 0.0033 19.5 3.8 27 144-170 23-51 (74)
79 cd04236 AAK_NAGS-Urea AAK_NAGS 22.7 3.6E+02 0.0078 23.4 6.8 46 31-96 33-78 (271)
80 COG0276 HemH Protoheme ferro-l 22.4 2.4E+02 0.0052 25.2 5.8 78 74-160 104-201 (320)
81 PRK09432 metF 5,10-methylenete 21.3 2.4E+02 0.0052 24.8 5.5 89 72-160 189-289 (296)
82 PRK06520 5-methyltetrahydropte 20.8 3E+02 0.0065 24.9 6.2 35 63-98 161-195 (368)
83 TIGR01091 upp uracil phosphori 20.2 3.3E+02 0.0072 22.3 5.9 50 71-152 135-184 (207)
84 TIGR02744 TrbI_Ftype type-F co 20.1 1.8E+02 0.004 21.7 3.8 26 115-140 57-82 (112)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=5.4e-49 Score=351.80 Aligned_cols=221 Identities=32% Similarity=0.556 Sum_probs=192.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhCcHHHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHH
Q 045703 1 VISLKTQLSYYKKVESWLREKLGNDEGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKE 80 (247)
Q Consensus 1 ~i~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (247)
+++|.+||++|+++++++....|.+++....+++||+||||+|||+.. |... +......+++++++.+++.+.+.|++
T Consensus 126 ~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~-~~~~-~~~~~~~~~~~~~~~lv~~~~~~i~~ 203 (351)
T PLN03156 126 VIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLEN-YYTF-PGRRSQYTVSQYQDFLIGIAENFVKK 203 (351)
T ss_pred ccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHH-hhcc-ccccccCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999999998887787667778899999999999999864 4322 11112235677889999999999999
Q ss_pred HHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhC
Q 045703 81 IYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINH 160 (247)
Q Consensus 81 L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~ 160 (247)
||++|||+|+|+|+||+||+|..+.....+..+|.+.+|.++..||++|+.++++|++++|+++|+++|+|+++.++++|
T Consensus 204 Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~n 283 (351)
T PLN03156 204 LYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRN 283 (351)
T ss_pred HHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhC
Confidence 99999999999999999999997654222346899999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccceeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 161 PFKYGFKEGKAACCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 161 P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
|++|||+++.++||+.|.++....|++. ....|++|++|+|||++|||+++|+++|+.++++.
T Consensus 284 P~~yGf~~~~~aCCg~g~~~~~~~C~~~----~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 284 PSAYGFEVTSVACCATGMFEMGYLCNRN----NPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred ccccCcccCCccccCCCCCCCccccCCC----CCCccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 9999999999999998888877889853 12579999999999999999999999999999976
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=1.7e-48 Score=344.70 Aligned_cols=218 Identities=37% Similarity=0.689 Sum_probs=192.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHhCcHHHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHH
Q 045703 2 ISLKTQLSYYKKVESWLREKLGNDEGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEI 81 (247)
Q Consensus 2 i~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 81 (247)
++|.+||++|++++++++...|.+++.+..+++||+||||+|||+.. +... .. ...+..++++.+++++.+.|++|
T Consensus 98 ~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~-~~~~-~~--~~~~~~~~~~~~v~~i~~~v~~L 173 (315)
T cd01837 98 ISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNN-YFAN-PT--RQYEVEAYVPFLVSNISSAIKRL 173 (315)
T ss_pred ecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHH-HhcC-cc--ccCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998888888778888999999999999999875 4322 11 02355678999999999999999
Q ss_pred HHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCC
Q 045703 82 YKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHP 161 (247)
Q Consensus 82 ~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P 161 (247)
+++|||+|+|+|+||+||+|.++.....+..+|.+.++.++..||.+|+.++++|++++++++|+++|+|+++.++++||
T Consensus 174 ~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np 253 (315)
T cd01837 174 YDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNP 253 (315)
T ss_pred HhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhCh
Confidence 99999999999999999999987654223468999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccceeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 162 FKYGFKEGKAACCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 162 ~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
+.|||+++.++||+.|.++....|... ....|++|++|+|||++|||+++|++||+.+++|.
T Consensus 254 ~~yGf~~~~~aCc~~g~~~~~~~c~~~----~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 254 AKYGFENTLKACCGTGGPEGGLLCNPC----GSTVCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred hhcCCcCCCcCccCCCCCCcccccCCC----CCCcCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 999999999999998876666778742 24789999999999999999999999999999873
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=8.4e-43 Score=303.73 Aligned_cols=197 Identities=20% Similarity=0.302 Sum_probs=163.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHhCcHHHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHH
Q 045703 2 ISLKTQLSYYKKVESWLREKLGNDEGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEI 81 (247)
Q Consensus 2 i~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 81 (247)
++|.+||++|++.+. ...+++||+||||+||++.. +...........+..++++.+++++...|++|
T Consensus 84 ~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 150 (281)
T cd01847 84 PSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAA-LAALTTATTTQAAAVAAAATAAADLASQVKNL 150 (281)
T ss_pred CCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHH-HhhccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 579999999997653 24789999999999999975 43220100011335678899999999999999
Q ss_pred HHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCC
Q 045703 82 YKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHP 161 (247)
Q Consensus 82 ~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P 161 (247)
+++|||+|+|+++||+||+|.++... ..|.+.++.++..||++|+.++++|+.+ +|+++|+|.++.++++||
T Consensus 151 ~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP 222 (281)
T cd01847 151 LDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKEVVANP 222 (281)
T ss_pred HHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHHHHhCh
Confidence 99999999999999999999987642 4577889999999999999999988643 899999999999999999
Q ss_pred CCCCccccccceeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 162 FKYGFKEGKAACCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 162 ~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
++|||+++.++||+.+.... |... ....|.+|++|+|||++|||+++|+++|+++++.
T Consensus 223 ~~yGf~~~~~~CC~~~~~~~---~~~~----~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 223 AAYGFTNTTTPACTSTSAAG---SGAA----TLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred HhcCccCCCccccCCCCccc---cccc----cccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999654332 4321 1257999999999999999999999999999864
No 4
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.1e-38 Score=275.75 Aligned_cols=190 Identities=26% Similarity=0.444 Sum_probs=164.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHhCcHHHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHH
Q 045703 2 ISLKTQLSYYKKVESWLREKLGNDEGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEI 81 (247)
Q Consensus 2 i~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 81 (247)
++|.+||++|++.++. +..+++|++||+|+||++.. +.. .......++.+++++.+.|++|
T Consensus 80 ~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~-~~~-------~~~~~~~~~~~~~~~~~~i~~l 140 (270)
T cd01846 80 PGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNA-LDL-------PQNPDTLVTRAVDNLFQALQRL 140 (270)
T ss_pred CCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhh-ccc-------cccccccHHHHHHHHHHHHHHH
Confidence 4799999999988753 35688999999999999984 211 1234457888999999999999
Q ss_pred HHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCC
Q 045703 82 YKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHP 161 (247)
Q Consensus 82 ~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P 161 (247)
+++|+|+|+|+++||++|+|.+..... ...+.++.+++.||++|++++++|++++|+.+|.++|+|+++.++++||
T Consensus 141 ~~~g~~~i~v~~~p~~~~~P~~~~~~~----~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p 216 (270)
T cd01846 141 YAAGARNFLVLNLPDLGLTPAFQAQGD----AVAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDNP 216 (270)
T ss_pred HHCCCCEEEEeCCCCCCCCcccccCCc----ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhCH
Confidence 999999999999999999999876532 1126888999999999999999999999999999999999999999999
Q ss_pred CCCCccccccceeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 162 FKYGFKEGKAACCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 162 ~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
+.|||+++..+||+.+. |.+ ....|.+|++|+|||++|||+++|++||+++++
T Consensus 217 ~~yGf~~~~~~C~~~~~------~~~-----~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 217 AAYGFTNVTDPCLDYVY------SYS-----PREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred HhcCCCcCcchhcCCCc------ccc-----ccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 99999999999998542 543 247899999999999999999999999999986
No 5
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1e-38 Score=287.95 Aligned_cols=180 Identities=19% Similarity=0.292 Sum_probs=155.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHhCcHHHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHH
Q 045703 2 ISLKTQLSYYKKVESWLREKLGNDEGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEI 81 (247)
Q Consensus 2 i~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 81 (247)
++|.+||++|+.. +++||+||+|+|||+. |.. ++++.+++.+.+.|++|
T Consensus 222 ~~L~~Qv~~~~~~-----------------~~aL~lV~iG~NDy~~--~~~------------~~v~~vV~~~~~~l~~L 270 (408)
T PRK15381 222 SNTDRQVASYTPS-----------------HQDLAIFLLGANDYMT--LHK------------DNVIMVVEQQIDDIEKI 270 (408)
T ss_pred CCHHHHHHHHHhc-----------------CCcEEEEEeccchHHH--hHH------------HHHHHHHHHHHHHHHHH
Confidence 4688999885431 5899999999999985 421 24677899999999999
Q ss_pred HHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCC
Q 045703 82 YKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHP 161 (247)
Q Consensus 82 ~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P 161 (247)
+++|||+|+|.|+||+||+|..+.. ...+.+|.++..||++|+.++++|++++|+++|+++|+|.++.++++||
T Consensus 271 y~lGARk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP 344 (408)
T PRK15381 271 ISGGVNNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAA 344 (408)
T ss_pred HHcCCcEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCH
Confidence 9999999999999999999997642 1247889999999999999999999999999999999999999999999
Q ss_pred CCCCccccccceeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 162 FKYGFKEGKAACCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 162 ~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
++|||+++.. ||+.|.......|.+. ..+|. +|+|||.+|||+++|+++|.++.+-+
T Consensus 345 ~~yGF~~~~~-cCg~G~~~~~~~C~p~-----~~~C~---~YvFWD~vHPTe~ah~iiA~~~~~~i 401 (408)
T PRK15381 345 SNIGYDTENP-YTHHGYVHVPGAKDPQ-----LDICP---QYVFNDLVHPTQEVHHCFAIMLESFI 401 (408)
T ss_pred HhcCCCcccc-ccCCCccCCccccCcc-----cCCCC---ceEecCCCCChHHHHHHHHHHHHHHH
Confidence 9999999876 9998866555668753 36784 99999999999999999999987754
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.96 E-value=1.2e-29 Score=221.64 Aligned_cols=200 Identities=21% Similarity=0.319 Sum_probs=153.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhCcH-HHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHH
Q 045703 3 SLKTQLSYYKKVESWLREKLGND-EGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEI 81 (247)
Q Consensus 3 ~l~~Qv~~F~~~~~~~~~~~g~~-~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 81 (247)
+|-+|+.+|........ .+.. ..--..++.|+.+|.|+||++.. -..+ ....+.+......++.+.|++|
T Consensus 133 ~~~~Qv~~~l~a~~~~~--v~~~~~~~~l~p~~l~~~~ggand~~~~-~~~~------a~~~q~~~~~~~~~~~~~Vq~L 203 (370)
T COG3240 133 SLAQQVGAFLAAGQGGF--VWPNYPAQGLDPSALYFLWGGANDYLAL-PMLK------AAAYQQLEGSTKADQSSAVQRL 203 (370)
T ss_pred chHHHHHHHHHhcCCcc--ccccccccccCHHHHHHHhhcchhhhcc-cccc------hhhhHHHhcchhhHHHHHHHHH
Confidence 67889999998776410 0111 11124468899999999999884 1111 1111222333356799999999
Q ss_pred HHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCC
Q 045703 82 YKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHP 161 (247)
Q Consensus 82 ~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P 161 (247)
.+.|||+|+|+++|+++.+|..... +.....+.+++..||+.|...|+++ +.+|+.+|++.+|++++.+|
T Consensus 204 ~~AGA~~i~v~~lpDl~l~P~~~~~-----~~~~~~a~~~t~~~Na~L~~~L~~~-----g~nIi~iD~~~llk~im~nP 273 (370)
T COG3240 204 IAAGARNILVMTLPDLSLTPAGKAY-----GTEAIQASQATIAFNASLTSQLEQL-----GGNIIRIDTYTLLKEIMTNP 273 (370)
T ss_pred HHhhccEEEEeeccccccccccccc-----cchHHHHHHHHHHHHHHHHHHHHHh-----cCcEEEeEhHHHHHHHHhCH
Confidence 9999999999999999999998753 2223378889999999999999886 47899999999999999999
Q ss_pred CCCCccccccceeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 162 FKYGFKEGKAACCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 162 ~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
++|||+|++..||.....++ .|.+. ....|..+++|+|||++|||+++|++||+++++..
T Consensus 274 a~fGlant~~~~c~~~~~~~--~~~a~----~p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~l 333 (370)
T COG3240 274 AEFGLANTTAPACDATVSNP--ACSAS----LPALCAAPQKYLFADSVHPTTAVHHLIAEYILARL 333 (370)
T ss_pred HhcCcccCCCcccCcccCCc--ccccc----cccccCCccceeeecccCCchHHHHHHHHHHHHHH
Confidence 99999999999998654332 55542 11445678899999999999999999999999875
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.83 E-value=6e-20 Score=153.55 Aligned_cols=147 Identities=29% Similarity=0.539 Sum_probs=117.7
Q ss_pred cccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCc-----EEEEecCCCCCcccchh
Q 045703 30 RISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGR-----KFAFMNVPDLGCLPVMR 104 (247)
Q Consensus 30 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar-----~~~v~~lppl~~~P~~~ 104 (247)
..+.+|++||+|+||++.. . . .......++.+++++.+.+++|++.|++ ++++.++||+++.|...
T Consensus 80 ~~~~~lv~i~~G~ND~~~~-~-~-------~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
T PF00657_consen 80 FYDPDLVVIWIGTNDYFNN-R-D-------SSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWS 150 (234)
T ss_dssp HHTTSEEEEE-SHHHHSSC-C-S-------CSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHH
T ss_pred cCCcceEEEecccCcchhh-c-c-------cchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccc
Confidence 4578999999999998742 1 1 1223445677899999999999999999 99999999999888766
Q ss_pred hcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeeccHHHHHH--HhCCCCCCccccccceeecccCCC
Q 045703 105 IMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLK-GFKYSLFDLNSSLRKR--INHPFKYGFKEGKAACCGTGQFRG 181 (247)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~~--~~~P~~yGf~~~~~~Cc~~g~~~~ 181 (247)
.... ....|.+.++.++..||..|++.+.++++.++ +.++.++|++..+.+. ..+|+
T Consensus 151 ~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~------------------- 210 (234)
T PF00657_consen 151 SNNK-DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPE------------------- 210 (234)
T ss_dssp HTHT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGG-------------------
T ss_pred cccc-cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCcc-------------------
Confidence 5432 34678999999999999999999999887765 7899999999999997 43321
Q ss_pred ccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHH
Q 045703 182 VLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREM 223 (247)
Q Consensus 182 ~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~ 223 (247)
.++|+|||++|||++||++||+++
T Consensus 211 ------------------~~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 211 ------------------NDKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp ------------------HHHCBBSSSSSB-HHHHHHHHHHH
T ss_pred ------------------cceeccCCCcCCCHHHHHHHHcCC
Confidence 158999999999999999999975
No 8
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.09 E-value=2e-09 Score=85.18 Aligned_cols=117 Identities=16% Similarity=0.204 Sum_probs=82.7
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCcccchhhcccC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGG-RKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Ga-r~~~v~~lppl~~~P~~~~~~~~ 109 (247)
.+-++++|.+|+||+... . + .+...+++...|+++.+.+- -+|++.++||....+.
T Consensus 39 ~~pd~vvi~~G~ND~~~~-~-----------~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~~------- 95 (157)
T cd01833 39 AKPDVVLLHLGTNDLVLN-R-----------D----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDASG------- 95 (157)
T ss_pred CCCCEEEEeccCcccccC-C-----------C----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcch-------
Confidence 356899999999998663 1 1 24467778888888887643 2466666655332211
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
+.....||+.+.+.+++.... +.++.++|++..+..
T Consensus 96 ---------~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~--------------------------------- 131 (157)
T cd01833 96 ---------NARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT--------------------------------- 131 (157)
T ss_pred ---------hHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC---------------------------------
Confidence 345778999999998876542 567889998643311
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
+++.+|++|||++||+.||+.+++.
T Consensus 132 ------------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ------------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ------------cccccCCCCCchHHHHHHHHHHHhh
Confidence 2355799999999999999999875
No 9
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.06 E-value=2.3e-09 Score=87.03 Aligned_cols=129 Identities=13% Similarity=0.114 Sum_probs=83.9
Q ss_pred CceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHH-HhCCcEEEEecCCCCCcccchhhcccCCC
Q 045703 33 RGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIY-KTGGRKFAFMNVPDLGCLPVMRIMNTEKN 111 (247)
Q Consensus 33 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~-~~Gar~~~v~~lppl~~~P~~~~~~~~~~ 111 (247)
-++++|++|+||+... +... . ..+....++...|+.|. .....+|++.+.+|....+..
T Consensus 62 ~d~v~l~~G~ND~~~~-~~~~-------~----~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~-------- 121 (191)
T cd01834 62 PDVVSIMFGINDSFRG-FDDP-------V----GLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP-------- 121 (191)
T ss_pred CCEEEEEeecchHhhc-cccc-------c----cHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC--------
Confidence 5899999999998873 2100 1 13456777888888885 333445777665553322110
Q ss_pred CcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCCC
Q 045703 112 GSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRPV 191 (247)
Q Consensus 112 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~ 191 (247)
.......+.....||+.+++..++ .++.++|.++.+.+....+
T Consensus 122 ~~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------ 164 (191)
T cd01834 122 LPDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------ 164 (191)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC------------------------------
Confidence 011234455677788877766532 2488999999987754321
Q ss_pred CccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 192 KEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 192 ~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
...++++|++||+++||++||+.++++
T Consensus 165 --------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 --------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred --------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 234567899999999999999998763
No 10
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=99.04 E-value=2.3e-09 Score=86.34 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=82.1
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHh-CCcEEEEecCCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKT-GGRKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~-Gar~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
.-++++|++|+||+... . + .+...+++...++++.+. ...+++++++||....+..
T Consensus 51 ~pd~v~i~~G~ND~~~~-~-----------~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~~------- 107 (174)
T cd01841 51 NPSKVFLFLGTNDIGKE-V-----------S----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDEI------- 107 (174)
T ss_pred CCCEEEEEeccccCCCC-C-----------C----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCccccc-------
Confidence 45889999999997653 1 1 344677888888888875 3457888888876433220
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
....+.....||+.+++..++ .++.++|+++.+..-. +
T Consensus 108 ----~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~~~------------------~------------- 145 (174)
T cd01841 108 ----KTRSNTRIQRLNDAIKELAPE-------LGVTFIDLNDVLVDEF------------------G------------- 145 (174)
T ss_pred ----ccCCHHHHHHHHHHHHHHHHH-------CCCEEEEcHHHHcCCC------------------C-------------
Confidence 111234577899888876543 2378999988763310 0
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
...+.+..|++|||++||+.||+.+.+
T Consensus 146 --------~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 --------NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred --------CccccccCCCcccCHHHHHHHHHHHHh
Confidence 011235579999999999999999865
No 11
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.02 E-value=6e-09 Score=82.19 Aligned_cols=124 Identities=16% Similarity=0.157 Sum_probs=84.1
Q ss_pred hcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHH-hCCcEEEEecCCCCCcccchhhcc
Q 045703 29 MRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYK-TGGRKFAFMNVPDLGCLPVMRIMN 107 (247)
Q Consensus 29 ~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~-~Gar~~~v~~lppl~~~P~~~~~~ 107 (247)
...+.+++++.+|+||+... ... ......+.+...++.+.+ ....+|++.+.||....|..
T Consensus 62 ~~~~~d~vil~~G~ND~~~~--~~~------------~~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~~---- 123 (187)
T cd00229 62 LKDKPDLVIIELGTNDLGRG--GDT------------SIDEFKANLEELLDALRERAPGAKVILITPPPPPPREGL---- 123 (187)
T ss_pred ccCCCCEEEEEecccccccc--ccc------------CHHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCchh----
Confidence 45678999999999998763 100 123345666677777765 45567888888887766541
Q ss_pred cCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCC
Q 045703 108 TEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGG 187 (247)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~ 187 (247)
.......+|..+++..++.... ..+.++|.+..+...
T Consensus 124 ----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~------------------------------ 160 (187)
T cd00229 124 ----------LGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE------------------------------ 160 (187)
T ss_pred ----------hHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC------------------------------
Confidence 1233666788777776554321 347788886544321
Q ss_pred CCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 188 KRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 188 ~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
+..++++|++|||++||+.+|+.+++
T Consensus 161 ------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 34567799999999999999999875
No 12
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.02 E-value=4e-09 Score=86.20 Aligned_cols=123 Identities=20% Similarity=0.187 Sum_probs=82.5
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHH-hCCcEEEEecCCCCCcccchhhcccC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYK-TGGRKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~-~Gar~~~v~~lppl~~~P~~~~~~~~ 109 (247)
.+-++++|++|+||+... .. .+...+++...++++.+ ....+|++.++||++..|....
T Consensus 66 ~~pd~Vii~~G~ND~~~~---~~-------------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~---- 125 (191)
T cd01836 66 TRFDVAVISIGVNDVTHL---TS-------------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ---- 125 (191)
T ss_pred CCCCEEEEEecccCcCCC---CC-------------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH----
Confidence 466899999999997652 11 24567788888888877 3456789999999876653211
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
......+.....+|+.+++..+ +++ ++.++|.+..+.
T Consensus 126 ---~~~~~~~~~~~~~n~~~~~~a~----~~~--~~~~id~~~~~~---------------------------------- 162 (191)
T cd01836 126 ---PLRWLLGRRARLLNRALERLAS----EAP--RVTLLPATGPLF---------------------------------- 162 (191)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHh----cCC--CeEEEecCCccc----------------------------------
Confidence 1122334455667766666553 332 477888764432
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
..++..|++|||++||++||+.+.+.+
T Consensus 163 -----------~~~~~~DglHpn~~Gy~~~a~~l~~~i 189 (191)
T cd01836 163 -----------PALFASDGFHPSAAGYAVWAEALAPAI 189 (191)
T ss_pred -----------hhhccCCCCCCChHHHHHHHHHHHHHH
Confidence 112335999999999999999998754
No 13
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.00 E-value=2.7e-09 Score=88.54 Aligned_cols=122 Identities=16% Similarity=0.126 Sum_probs=78.0
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhC------CcEEEEecCCCCCcccchh
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTG------GRKFAFMNVPDLGCLPVMR 104 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~G------ar~~~v~~lppl~~~P~~~ 104 (247)
.+.++++|++|+||+... +.. + .+...+++.+.|+.+.+.+ ..+|++...||+...+.-.
T Consensus 78 ~~pd~vii~lGtND~~~~-~~~---------~----~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~ 143 (208)
T cd01839 78 SPLDLVIIMLGTNDLKSY-FNL---------S----AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL 143 (208)
T ss_pred CCCCEEEEeccccccccc-cCC---------C----HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch
Confidence 456999999999998753 111 1 2445667777777777753 5678888877762111100
Q ss_pred hcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccc
Q 045703 105 IMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLS 184 (247)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~ 184 (247)
..+....+.....||+.+++.+++. ++.++|++.++..
T Consensus 144 -------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~---------------------------- 181 (208)
T cd01839 144 -------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST---------------------------- 181 (208)
T ss_pred -------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc----------------------------
Confidence 1112223455677887777765432 3667887543310
Q ss_pred cCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 185 CGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 185 c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
+..|++|||++||++||+.++.-+
T Consensus 182 -------------------~~~DGvH~~~~G~~~~a~~l~~~i 205 (208)
T cd01839 182 -------------------SPVDGVHLDADQHAALGQALASVI 205 (208)
T ss_pred -------------------CCCCccCcCHHHHHHHHHHHHHHH
Confidence 125999999999999999988643
No 14
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.00 E-value=5.3e-09 Score=86.74 Aligned_cols=127 Identities=15% Similarity=0.167 Sum_probs=74.7
Q ss_pred CceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCC
Q 045703 33 RGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNG 112 (247)
Q Consensus 33 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~ 112 (247)
-++++|++|+||++.. ... . ......++...+++...++++.+.|++ +++.++||+...+...
T Consensus 75 p~~vii~~G~ND~~~~--~~~-~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~-vil~t~~P~~~~~~~~-------- 137 (204)
T cd01830 75 VRTVIILEGVNDIGAS--GTD-F-----AAAPVTAEELIAGYRQLIRRAHARGIK-VIGATITPFEGSGYYT-------- 137 (204)
T ss_pred CCEEEEeccccccccc--ccc-c-----ccCCCCHHHHHHHHHHHHHHHHHCCCe-EEEecCCCCCCCCCCC--------
Confidence 4789999999998763 111 0 011123566788899999999999885 7777888754322211
Q ss_pred cchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCCCC
Q 045703 113 SCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRPVK 192 (247)
Q Consensus 113 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~~ 192 (247)
.. .+.++..+.+.+.+. .... .++|+++.|.+... +
T Consensus 138 ---~~----~~~~~~~~n~~~~~~----~~~~-~~vD~~~~~~~~~~-~------------------------------- 173 (204)
T cd01830 138 ---PA----REATRQAVNEWIRTS----GAFD-AVVDFDAALRDPAD-P------------------------------- 173 (204)
T ss_pred ---HH----HHHHHHHHHHHHHcc----CCCC-eeeEhHHhhcCCCC-c-------------------------------
Confidence 11 112233333333221 1212 36898876543110 0
Q ss_pred ccccCCCCCCceecCCCCchHHHHHHHHHHHh
Q 045703 193 EFELCENPNEYVYWDSIHLTEMANKQLAREMW 224 (247)
Q Consensus 193 ~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~ 224 (247)
..-...|+..|++|||++||++||+.+.
T Consensus 174 ----~~~~~~~~~~DGvHpn~~Gy~~~A~~i~ 201 (204)
T cd01830 174 ----SRLRPAYDSGDHLHPNDAGYQAMADAVD 201 (204)
T ss_pred ----hhcccccCCCCCCCCCHHHHHHHHHhcC
Confidence 0011345667999999999999999875
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.97 E-value=7.6e-09 Score=84.51 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=82.8
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHH--hCCcEEEEecCCCCCcccchhhcccC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYK--TGGRKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~--~Gar~~~v~~lppl~~~P~~~~~~~~ 109 (247)
+-++++|++|+||.... . . . ...+ .+...+++...|+++.+ .|+ ++++++.||...........
T Consensus 63 ~pd~vii~~G~ND~~~~-~-~--~---~~~~----~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~-- 128 (199)
T cd01838 63 QPDLVTIFFGANDAALP-G-Q--P---QHVP----LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLE-- 128 (199)
T ss_pred CceEEEEEecCccccCC-C-C--C---Cccc----HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhc--
Confidence 68899999999998763 1 1 0 0011 34556777788888877 455 47777777755322111000
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
.........+.....||+.+++..++ + .+.++|+++.+...-.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~iD~~~~~~~~~~------------------------------ 171 (199)
T cd01838 129 DGGSQPGRTNELLKQYAEACVEVAEE----L---GVPVIDLWTAMQEEAG------------------------------ 171 (199)
T ss_pred cccCCccccHHHHHHHHHHHHHHHHH----h---CCcEEEHHHHHHhccC------------------------------
Confidence 00111233455677788877765543 2 3778999877754100
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
..+.++.|++|||++||++||+.+.+-
T Consensus 172 ----------~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 198 (199)
T cd01838 172 ----------WLESLLTDGLHFSSKGYELLFEEIVKV 198 (199)
T ss_pred ----------chhhhcCCCCCcCHhHHHHHHHHHHhh
Confidence 112344699999999999999998763
No 16
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.95 E-value=3e-08 Score=80.39 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=81.3
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKN 111 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~ 111 (247)
.-++++|++|+||.... . + .+...+++...++.+.+.|++ +++...||....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~-~-----------~----~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------- 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVN-T-----------S----LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------- 114 (183)
T ss_pred CCCEEEEEeccCccccC-C-----------C----HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------
Confidence 46899999999998653 1 1 234567788888888888886 5555666554333211
Q ss_pred CcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCCC
Q 045703 112 GSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRPV 191 (247)
Q Consensus 112 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~ 191 (247)
.....+.....||..++...++ .++.++|++..+.+...
T Consensus 115 --~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~-------------------------------- 153 (183)
T cd04501 115 --QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN-------------------------------- 153 (183)
T ss_pred --hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc--------------------------------
Confidence 0112334566788877776543 24789999987655211
Q ss_pred CccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 192 KEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 192 ~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
......+..|++|||++||++||+.+...
T Consensus 154 ------~~~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 154 ------VGLKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred ------ccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 01223445699999999999999998753
No 17
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.95 E-value=9.4e-09 Score=84.53 Aligned_cols=141 Identities=12% Similarity=0.078 Sum_probs=84.4
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
..-++++|.+|+||++.. .... .. .......+.+...+++...++++.+.|++ +++++.||+.. +
T Consensus 58 ~~pd~vii~~G~ND~~~~-~~~~--~~-~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~-~--------- 122 (200)
T cd01829 58 EKPDVVVVFLGANDRQDI-RDGD--GY-LKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS-P--------- 122 (200)
T ss_pred CCCCEEEEEecCCCCccc-cCCC--ce-eecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC-h---------
Confidence 356899999999998763 2111 00 01112334566677888888888777776 77777776531 1
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
..+.....+|..+++.+++ . .+.++|++..|.+. ..|+.....
T Consensus 123 ------~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~~-------------~~~~~~~~~----------- 165 (200)
T cd01829 123 ------KLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVDE-------------NGRFTYSGT----------- 165 (200)
T ss_pred ------hHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcCC-------------CCCeeeecc-----------
Confidence 1123355677776665432 2 37899998776331 122210000
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
........++..|++|||+.||++||+.+...+
T Consensus 166 ----~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~l 198 (200)
T cd01829 166 ----DVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKLI 198 (200)
T ss_pred ----CCCCcEEEeecCCCceECHHHHHHHHHHHHHHh
Confidence 001112245567999999999999999998754
No 18
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.95 E-value=9.7e-09 Score=82.34 Aligned_cols=119 Identities=14% Similarity=0.140 Sum_probs=79.9
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHH--hCCcEEEEecCCCCCcccchhhcccC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYK--TGGRKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~--~Gar~~~v~~lppl~~~P~~~~~~~~ 109 (247)
..+++++.+|+||+... . + .+...+++.+.|+.+.+ .++ +|++.++||.+ +..
T Consensus 48 ~pd~vvl~~G~ND~~~~-~--~-------------~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~~------ 102 (169)
T cd01828 48 QPKAIFIMIGINDLAQG-T--S-------------DEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--ELK------ 102 (169)
T ss_pred CCCEEEEEeeccCCCCC-C--C-------------HHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--ccC------
Confidence 45999999999997653 1 1 24457778888888887 455 58888887755 100
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
...+.....||+.+++..++ . ++.++|++..+.+- .
T Consensus 103 ------~~~~~~~~~~n~~l~~~a~~-----~--~~~~id~~~~~~~~------~------------------------- 138 (169)
T cd01828 103 ------SIPNEQIEELNRQLAQLAQQ-----E--GVTFLDLWAVFTNA------D------------------------- 138 (169)
T ss_pred ------cCCHHHHHHHHHHHHHHHHH-----C--CCEEEechhhhcCC------C-------------------------
Confidence 11123467788888876542 2 46789997655220 0
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
. ...+++..|++|||++||++||+.+...+
T Consensus 139 -----~---~~~~~~~~DgiHpn~~G~~~~a~~i~~~~ 168 (169)
T cd01828 139 -----G---DLKNEFTTDGLHLNAKGYAVWAAALQPYL 168 (169)
T ss_pred -----C---CcchhhccCccccCHHHHHHHHHHHHHhh
Confidence 0 12345667999999999999999998643
No 19
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.92 E-value=1.5e-08 Score=83.70 Aligned_cols=133 Identities=14% Similarity=0.099 Sum_probs=82.2
Q ss_pred cCceEEEEeccccccchhhhccCcccc-cCccccchHHHHHHHHHHHHHHHHHhCCc-EEEEecCC-CCCcccchhhccc
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTIL-NSFSESNHVGMVIGNLTTVIKEIYKTGGR-KFAFMNVP-DLGCLPVMRIMNT 108 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~L~~~Gar-~~~v~~lp-pl~~~P~~~~~~~ 108 (247)
.-++++|++|+||+... .... ... +........+...+++...|+++.+.+.+ +|++++++ |+.. .
T Consensus 68 ~~d~V~i~~G~ND~~~~-~~~~--~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~-----~--- 136 (204)
T cd04506 68 KADVITITIGGNDLMQV-LEKN--FLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYV-----Y--- 136 (204)
T ss_pred cCCEEEEEecchhHHHH-HHhc--cccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCcccc-----c---
Confidence 57899999999998764 2111 000 00111122455678888889998886543 57777653 3211 0
Q ss_pred CCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCC
Q 045703 109 EKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGK 188 (247)
Q Consensus 109 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~ 188 (247)
.......+..+..||..+++.+.+ + .++.++|+++.+...-
T Consensus 137 ---~~~~~~~~~~~~~~n~~~~~~a~~----~--~~v~~vd~~~~~~~~~------------------------------ 177 (204)
T cd04506 137 ---FPNITEINDIVNDWNEASQKLASQ----Y--KNAYFVPIFDLFSDGQ------------------------------ 177 (204)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHh----C--CCeEEEehHHhhcCCc------------------------------
Confidence 011223456778888777766532 1 2488999987664310
Q ss_pred CCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 189 RPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 189 ~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
....+..|++|||++||++||+.+++
T Consensus 178 -----------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 -----------NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred -----------ccccccccCcCCCHHHHHHHHHHHHh
Confidence 12234569999999999999999875
No 20
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.92 E-value=1.3e-08 Score=87.20 Aligned_cols=162 Identities=14% Similarity=0.059 Sum_probs=88.2
Q ss_pred ccCceEEEEeccccccchhhhcc---Cccc---------ccCccccchHHHHHHHHHHHHHHHHHh-CCcEEEEecCCCC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTK---GFTI---------LNSFSESNHVGMVIGNLTTVIKEIYKT-GGRKFAFMNVPDL 97 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~v~~L~~~-Gar~~~v~~lppl 97 (247)
..-++++|++|+||+... .... .... ..........+...+++...|++|.+. .--+|++++.|++
T Consensus 79 ~~~dlV~i~iG~ND~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~ 157 (259)
T cd01823 79 PDTDLVTITIGGNDLGFA-DVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRL 157 (259)
T ss_pred CCCCEEEEEECccccchH-HHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccc
Confidence 357899999999998663 1110 0000 000111223455677788888888764 3346899998875
Q ss_pred Ccc----cchhh-cccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccc
Q 045703 98 GCL----PVMRI-MNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAA 172 (247)
Q Consensus 98 ~~~----P~~~~-~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~ 172 (247)
... |.... ....-.....+..++....+|..+++...+. ...++.++|++..|..- ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~----~~~~v~fvD~~~~f~~~-------------~~ 220 (259)
T cd01823 158 FPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADA----GDYKVRFVDTDAPFAGH-------------RA 220 (259)
T ss_pred ccCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----CCceEEEEECCCCcCCC-------------cc
Confidence 311 00000 0000001223455666777777777765433 33568999998766431 12
Q ss_pred eeecccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 173 CCGTGQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 173 Cc~~g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
|....... . . .+....+.-|++|||.+||+.||+.+.+
T Consensus 221 ~~~~~~~~-----~--------~--~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 221 CSPDPWSR-----S--------V--LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred ccCCCccc-----c--------c--cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 21110000 0 0 0122334569999999999999999875
No 21
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.90 E-value=2.7e-08 Score=79.98 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=76.7
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGG-RKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Ga-r~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
..++++|++|+||+... . + .+...+++.+.|+++.+.+. .+|+++.+||. |. .
T Consensus 50 ~p~~vvi~~G~ND~~~~-~-----------~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~----- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASG-R-----------T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R----- 103 (171)
T ss_pred CCCEEEEEEecCcccCC-C-----------C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c-----
Confidence 46799999999997552 1 1 34467888899999988753 35666665541 11 0
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
...+.....+|+.+++..+ + ...+.++|++..+.+.-.
T Consensus 104 -----~~~~~~~~~~n~~~~~~a~----~--~~~v~~vD~~~~~~~~~~------------------------------- 141 (171)
T cd04502 104 -----WALRPKIRRFNALLKELAE----T--RPNLTYIDVASPMLDADG------------------------------- 141 (171)
T ss_pred -----hhhHHHHHHHHHHHHHHHh----c--CCCeEEEECcHHHhCCCC-------------------------------
Confidence 0112235567777766543 1 235789999876643100
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
....+++..|++|||++||++||+.+..
T Consensus 142 -------~~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 142 -------KPRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred -------CcChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 0012455679999999999999998864
No 22
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.87 E-value=2.4e-08 Score=83.43 Aligned_cols=121 Identities=15% Similarity=0.148 Sum_probs=79.2
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhC-CcEEEEecCCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTG-GRKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~G-ar~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
.-++++|++|+||+... . . .+.+.+++...|+++.+.. ..+|++++++|....|.
T Consensus 89 ~pd~VvI~~G~ND~~~~-~--~-------------~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~~-------- 144 (214)
T cd01820 89 NPKVVVLLIGTNNIGHT-T--T-------------AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNPN-------- 144 (214)
T ss_pred CCCEEEEEecccccCCC-C--C-------------HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCch--------
Confidence 46899999999997653 1 1 3456778888888888763 24688888877543211
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
........+|+.+++.+. ...++.++|++..+.+. -|
T Consensus 145 ------~~~~~~~~~n~~l~~~~~------~~~~v~~vd~~~~~~~~------~g------------------------- 181 (214)
T cd01820 145 ------PLRERNAQVNRLLAVRYD------GLPNVTFLDIDKGFVQS------DG------------------------- 181 (214)
T ss_pred ------hHHHHHHHHHHHHHHHhc------CCCCEEEEeCchhhccc------CC-------------------------
Confidence 112335567777665432 12358899987665321 00
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
...+.++.|++|||++||++||+.+.+.+
T Consensus 182 --------~~~~~~~~DGlHpn~~Gy~~~a~~l~~~l 210 (214)
T cd01820 182 --------TISHHDMPDYLHLTAAGYRKWADALHPTL 210 (214)
T ss_pred --------CcCHhhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 11222457999999999999999998754
No 23
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.85 E-value=6.6e-08 Score=84.64 Aligned_cols=149 Identities=12% Similarity=0.142 Sum_probs=86.9
Q ss_pred CceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCc-EEEEecCCCCCcccchhhcccC--
Q 045703 33 RGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGR-KFAFMNVPDLGCLPVMRIMNTE-- 109 (247)
Q Consensus 33 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar-~~~v~~lppl~~~P~~~~~~~~-- 109 (247)
=.|++|+||+||+... ... . .. ...+...+++.+.|+.|.+..-| .|+++++|++..++........
T Consensus 120 wklVtI~IG~ND~c~~--~~~-~---~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~ 189 (288)
T cd01824 120 WKLITIFIGGNDLCSL--CED-A---NP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCE 189 (288)
T ss_pred CcEEEEEecchhHhhh--ccc-c---cC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCcccc
Confidence 4579999999998763 111 1 01 22455677888889988887754 5777888887655543311100
Q ss_pred --CCCcch----------HHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecc
Q 045703 110 --KNGSCL----------EKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTG 177 (247)
Q Consensus 110 --~~~~~~----------~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g 177 (247)
....|. +.+....+.|+..+.+.++.-+-+..+..+++ ..+|.+.+..+.
T Consensus 190 ~~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~~~~--------------- 251 (288)
T cd01824 190 TLLAPECPCLLGPTENSYQDLKKFYKEYQNEVEEIVESGEFDREDFAVVV---QPFFEDTSLPPL--------------- 251 (288)
T ss_pred ccCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccCccEEe---eCchhccccccc---------------
Confidence 011231 35556677888777776654221223344444 223333211000
Q ss_pred cCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 178 QFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 178 ~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
... .-.+++-+|++||+++||.+||+.++...
T Consensus 252 -----------------~~g-~d~~~~~~D~~Hps~~G~~~ia~~lwn~m 283 (288)
T cd01824 252 -----------------PDG-PDLSFFSPDCFHFSQRGHAIAANALWNNL 283 (288)
T ss_pred -----------------cCC-CcchhcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 001 01256779999999999999999988753
No 24
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.83 E-value=3.9e-08 Score=79.76 Aligned_cols=117 Identities=15% Similarity=0.153 Sum_probs=77.3
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCC-CcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDL-GCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl-~~~P~~~~~~~~~ 110 (247)
.-++++|++|+||.... .. + .+...+++...|+++...+++ |+++++||. +..|..
T Consensus 67 ~~d~vii~~G~ND~~~~--~~---------~----~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~------- 123 (185)
T cd01832 67 RPDLVTLLAGGNDILRP--GT---------D----PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR------- 123 (185)
T ss_pred CCCEEEEeccccccccC--CC---------C----HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH-------
Confidence 56899999999997651 01 1 344677788888888877775 777888876 322221
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
...+.....+|+.|++..++ .++.++|++..+. .
T Consensus 124 -----~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~--~-------------------------------- 157 (185)
T cd01832 124 -----RRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE--F-------------------------------- 157 (185)
T ss_pred -----HHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc--c--------------------------------
Confidence 11233467788877776543 2478888864431 0
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
....++.-|++||+++||++||+.+++
T Consensus 158 --------~~~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 158 --------ADPRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred --------CCccccccCCCCCChhHHHHHHHHHhh
Confidence 011223349999999999999999876
No 25
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.79 E-value=5.1e-08 Score=80.25 Aligned_cols=132 Identities=17% Similarity=0.085 Sum_probs=82.2
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKN 111 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~ 111 (247)
+.++++|++|+||.... ... ...-++...+++...|+++.+.|++ +++++.||... +..
T Consensus 65 ~pdlVii~~G~ND~~~~--~~~---------~~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~~~------ 123 (198)
T cd01821 65 PGDYVLIQFGHNDQKPK--DPE---------YTEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---FDE------ 123 (198)
T ss_pred CCCEEEEECCCCCCCCC--CCC---------CCCcHHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---cCC------
Confidence 46999999999998763 110 0111355678888999999999986 44454444211 100
Q ss_pred CcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCCC
Q 045703 112 GSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRPV 191 (247)
Q Consensus 112 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~ 191 (247)
.. ..+.....||+.+++..++. .+.++|+++.+.+..+.- |-.
T Consensus 124 ~~---~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~---g~~------------------------ 166 (198)
T cd01821 124 GG---KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAI---GPE------------------------ 166 (198)
T ss_pred CC---cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHh---ChH------------------------
Confidence 00 12223566787777766542 367899999988765420 000
Q ss_pred CccccCCCCC-CceecCCCCchHHHHHHHHHHHhcC
Q 045703 192 KEFELCENPN-EYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 192 ~~~~~C~~~~-~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
..... .++..|++|||+.||+.||+.+++.
T Consensus 167 -----~~~~~~~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 167 -----KSKKYFPEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred -----hHHhhCcCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 00000 2445699999999999999999864
No 26
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.78 E-value=5.1e-08 Score=77.27 Aligned_cols=121 Identities=15% Similarity=0.169 Sum_probs=77.2
Q ss_pred cccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccC
Q 045703 30 RISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 30 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~ 109 (247)
...-++++|.+|+||+... .. .....+...+++...++.+...+ +++++++||....+....
T Consensus 59 ~~~~d~vvi~~G~ND~~~~---~~---------~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~~---- 120 (179)
T PF13472_consen 59 DPKPDLVVISFGTNDVLNG---DE---------NDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDPK---- 120 (179)
T ss_dssp GTTCSEEEEE--HHHHCTC---TT---------CHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTTH----
T ss_pred cCCCCEEEEEccccccccc---cc---------ccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccccc----
Confidence 3456799999999998772 11 11234567788888888887777 788888887554332211
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
..........+|+.+++..+ ++ ++.++|+...+.+ +.
T Consensus 121 -----~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~----~~--------------------------- 157 (179)
T PF13472_consen 121 -----QDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD----HD--------------------------- 157 (179)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT----TT---------------------------
T ss_pred -----chhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc----cc---------------------------
Confidence 12234456677777776553 32 5889999887543 10
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHH
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQL 219 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~i 219 (247)
....++++.|++|||++||++|
T Consensus 158 --------~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 158 --------GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp --------SCBHTCTBTTSSSBBHHHHHHH
T ss_pred --------ccchhhcCCCCCCcCHHHhCcC
Confidence 0123456689999999999986
No 27
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.74 E-value=1.6e-07 Score=76.37 Aligned_cols=120 Identities=15% Similarity=0.104 Sum_probs=73.6
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGG-RKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Ga-r~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
..++++|++|+||.... .. . . .+....++...|+++.+.+. .+|++.+.||......
T Consensus 67 ~pd~Vii~~G~ND~~~~--~~--~------~----~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~-------- 124 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQ--NW--K------Y----KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG-------- 124 (188)
T ss_pred CCCEEEEEcccCCCCCC--CC--c------c----HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC--------
Confidence 46899999999997763 11 0 1 23446678888888877654 4677777665432111
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
.. ...+.+...+|+.+++..+ + ..+.++|++..+..
T Consensus 125 --~~-~~~~~~~~~~~~~~~~~a~----~---~~~~~vD~~~~~~~---------------------------------- 160 (188)
T cd01827 125 --GF-INDNIIKKEIQPMIDKIAK----K---LNLKLIDLHTPLKG---------------------------------- 160 (188)
T ss_pred --Cc-cchHHHHHHHHHHHHHHHH----H---cCCcEEEccccccC----------------------------------
Confidence 00 0112334556666665543 2 23677888654311
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
.+ .++-|++||+++||++||+.+++.+
T Consensus 161 --------~~--~~~~Dg~Hpn~~G~~~~A~~i~~~i 187 (188)
T cd01827 161 --------KP--ELVPDWVHPNEKGAYILAKVVYKAI 187 (188)
T ss_pred --------Cc--cccCCCCCcCHHHHHHHHHHHHHHh
Confidence 00 1335999999999999999998753
No 28
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.73 E-value=3e-07 Score=74.42 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=72.7
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCcccchhhcccC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGG-RKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Ga-r~~~v~~lppl~~~P~~~~~~~~ 109 (247)
...++++|++|+||+... ....+++...+++|.+.+- .+|++++.||. |.....
T Consensus 56 ~~pd~vii~~G~ND~~~~-------------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~--- 110 (177)
T cd01844 56 VPADLYIIDCGPNIVGAE-------------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT--- 110 (177)
T ss_pred cCCCEEEEEeccCCCccH-------------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC---
Confidence 356899999999995441 0357788899999988764 45777666653 221111
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
.......+. .+.++.+.++.++.. ...++.++|.++++..
T Consensus 111 --~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~v~~id~~~~~~~--------------------------------- 150 (177)
T cd01844 111 --PGRGKLTLA----VRRALREAFEKLRAD-GVPNLYYLDGEELLGP--------------------------------- 150 (177)
T ss_pred --cchhHHHHH----HHHHHHHHHHHHHhc-CCCCEEEecchhhcCC---------------------------------
Confidence 111222333 333344444444332 2346889997543310
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
+.-++.|++|||++||++||+.+...
T Consensus 151 -----------~~~~~~DglHpn~~Gy~~~a~~l~~~ 176 (177)
T cd01844 151 -----------DGEALVDGIHPTDLGHMRYADRFEPV 176 (177)
T ss_pred -----------CCCCCCCCCCCCHHHHHHHHHHHhhc
Confidence 01134699999999999999998753
No 29
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.72 E-value=1.1e-07 Score=78.13 Aligned_cols=112 Identities=18% Similarity=0.149 Sum_probs=69.7
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEec-CCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMN-VPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~-lppl~~~P~~~~~~~~~ 110 (247)
+.++++|++|+||.... . + .+...+++...++++.+.|++.+++.- +|+ .+.
T Consensus 71 ~pd~Vii~~GtND~~~~-~-----------~----~~~~~~~l~~li~~~~~~~~~~ill~~~~P~-----~~~------ 123 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG-F-----------P----PQQTEQTLRQIIQDVKAANAQPLLMQIRLPA-----NYG------ 123 (191)
T ss_pred CCCEEEEEeccCcCccC-C-----------C----HHHHHHHHHHHHHHHHHcCCCEEEEEeecCC-----ccc------
Confidence 45899999999997552 1 1 345678888889998888988766531 221 110
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
..++..+.+.++++++++. +.++|.+.....
T Consensus 124 ------------~~~~~~~~~~~~~~a~~~~---v~~id~~~~~~~---------------------------------- 154 (191)
T PRK10528 124 ------------RRYNEAFSAIYPKLAKEFD---IPLLPFFMEEVY---------------------------------- 154 (191)
T ss_pred ------------HHHHHHHHHHHHHHHHHhC---CCccHHHHHhhc----------------------------------
Confidence 0123334444455555542 556675311100
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
...+++..|++||+++||+.||+.+++..
T Consensus 155 --------~~~~~~~~DGiHpn~~Gy~~~A~~i~~~l 183 (191)
T PRK10528 155 --------LKPQWMQDDGIHPNRDAQPFIADWMAKQL 183 (191)
T ss_pred --------cCHhhcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 01234556999999999999999998864
No 30
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.68 E-value=1.5e-07 Score=77.00 Aligned_cols=123 Identities=15% Similarity=0.083 Sum_probs=72.1
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKN 111 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~ 111 (247)
..++++|++|+||+... .... ...+ .+...+++...++++ ..++ +|+++++||+....
T Consensus 69 ~pd~V~i~~G~ND~~~~-~~~~-----~~~~----~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARG-GRKR-----PQLS----ARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccc-cCcc-----cccC----HHHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 56899999999998763 1100 0111 223344444444443 2344 47777777654211
Q ss_pred CcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCCC
Q 045703 112 GSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRPV 191 (247)
Q Consensus 112 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~ 191 (247)
....+.....+|+.+++..++ .++.++|++..+.+. +.
T Consensus 127 ---~~~~~~~~~~~n~~~~~~a~~-------~~~~~vd~~~~~~~~---~~----------------------------- 164 (193)
T cd01835 127 ---MPYSNRRIARLETAFAEVCLR-------RDVPFLDTFTPLLNH---PQ----------------------------- 164 (193)
T ss_pred ---cchhhHHHHHHHHHHHHHHHH-------cCCCeEeCccchhcC---cH-----------------------------
Confidence 012234566788777776543 236789998766541 00
Q ss_pred CccccCCCCCCceecCCCCchHHHHHHHHHHHhc
Q 045703 192 KEFELCENPNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 192 ~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
....++..|++|||++||++||+.+.+
T Consensus 165 -------~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 -------WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred -------HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 011223359999999999999998875
No 31
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.67 E-value=1.3e-07 Score=76.69 Aligned_cols=130 Identities=15% Similarity=0.149 Sum_probs=78.7
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHh-CCcEEEEecCCCCCcccchhhcccC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKT-GGRKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~-Gar~~~v~~lppl~~~P~~~~~~~~ 109 (247)
..-++++|.+|+||.... . .+ .+...+++...++++.+. ...+|++++.||....+...
T Consensus 55 ~~pd~Vii~~G~ND~~~~-~----------~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~~----- 114 (189)
T cd01825 55 LPPDLVILSYGTNEAFNK-Q----------LN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGAG----- 114 (189)
T ss_pred CCCCEEEEECCCcccccC-C----------CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCCC-----
Confidence 356899999999996652 1 11 345677888888888874 44568887776643222100
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCC
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKR 189 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~ 189 (247)
....+.....+|..+++..+ +. + +.++|+++.+... |.
T Consensus 115 -----~~~~~~~~~~~~~~~~~~a~----~~-~--v~~vd~~~~~~~~---------------------------~~--- 152 (189)
T cd01825 115 -----RWRTPPGLDAVIAAQRRVAK----EE-G--IAFWDLYAAMGGE---------------------------GG--- 152 (189)
T ss_pred -----CcccCCcHHHHHHHHHHHHH----Hc-C--CeEEeHHHHhCCc---------------------------ch---
Confidence 00111224556666555543 32 2 7889998776331 00
Q ss_pred CCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 190 PVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 190 ~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
........++..|++|||++||+.||+.+.+.+
T Consensus 153 -----~~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~i 185 (189)
T cd01825 153 -----IWQWAEPGLARKDYVHLTPRGYERLANLLYEAL 185 (189)
T ss_pred -----hhHhhcccccCCCcccCCcchHHHHHHHHHHHH
Confidence 000012234557999999999999999998754
No 32
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.62 E-value=6.7e-07 Score=70.61 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=20.3
Q ss_pred ceecCCCCchHHHHHHHHHHHhcC
Q 045703 203 YVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 203 ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
++..|++|||++||+++|+.+.+.
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~a 149 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAKA 149 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHHh
Confidence 344699999999999999998763
No 33
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.57 E-value=5.7e-07 Score=72.20 Aligned_cols=113 Identities=15% Similarity=0.222 Sum_probs=68.8
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKN 111 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~ 111 (247)
..++++|++|+||.... . + .+...+++...++++.+.|++ +++.++|. |....
T Consensus 64 ~pd~v~i~~G~ND~~~~-~-----------~----~~~~~~~l~~li~~~~~~~~~-vil~~~~~----~~~~~------ 116 (177)
T cd01822 64 KPDLVILELGGNDGLRG-I-----------P----PDQTRANLRQMIETAQARGAP-VLLVGMQA----PPNYG------ 116 (177)
T ss_pred CCCEEEEeccCcccccC-C-----------C----HHHHHHHHHHHHHHHHHCCCe-EEEEecCC----CCccc------
Confidence 55799999999997653 1 1 234567788888888888876 55555431 11000
Q ss_pred CcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCCC
Q 045703 112 GSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRPV 191 (247)
Q Consensus 112 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~~ 191 (247)
......||+.+++.. ++. + +.++|.+ +..+..
T Consensus 117 -------~~~~~~~~~~~~~~a----~~~-~--~~~~d~~--~~~~~~-------------------------------- 148 (177)
T cd01822 117 -------PRYTRRFAAIYPELA----EEY-G--VPLVPFF--LEGVAG-------------------------------- 148 (177)
T ss_pred -------hHHHHHHHHHHHHHH----HHc-C--CcEechH--Hhhhhh--------------------------------
Confidence 012345666655544 332 2 4566652 111111
Q ss_pred CccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 192 KEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 192 ~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
..+++.-|++|||++||++||+.+++.+
T Consensus 149 --------~~~~~~~DgvHpn~~G~~~~a~~i~~~i 176 (177)
T cd01822 149 --------DPELMQSDGIHPNAEGQPIIAENVWPAL 176 (177)
T ss_pred --------ChhhhCCCCCCcCHHHHHHHHHHHHHhh
Confidence 1123446999999999999999998753
No 34
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.51 E-value=2.1e-06 Score=74.85 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=38.9
Q ss_pred CceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCc--EEEEecCCCC
Q 045703 33 RGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGR--KFAFMNVPDL 97 (247)
Q Consensus 33 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar--~~~v~~lppl 97 (247)
-.+++|++|+||.... ..+ . .... .++.-.+++.+.|+.|.+..-+ +|++.++|++
T Consensus 123 P~lVtI~lGgND~C~g--~~d--~-~~~t----p~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 123 PALVIYSMIGNDVCNG--PND--T-INHT----TPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred CeEEEEEeccchhhcC--CCc--c-ccCc----CHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 3888999999998763 111 1 0112 2445577888999999888644 8999999984
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.47 E-value=3.2e-06 Score=67.87 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=32.2
Q ss_pred CceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCC-cEEEEec
Q 045703 33 RGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGG-RKFAFMN 93 (247)
Q Consensus 33 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Ga-r~~~v~~ 93 (247)
-++++|.+|+||+... .. . ..+....++...|+++.+..- .+|++..
T Consensus 56 pd~vii~~G~ND~~~~--~~--------~----~~~~~~~~~~~li~~i~~~~p~~~i~~~~ 103 (169)
T cd01831 56 PDLVVINLGTNDFSTG--NN--------P----PGEDFTNAYVEFIEELRKRYPDAPIVLML 103 (169)
T ss_pred CCEEEEECCcCCCCCC--CC--------C----CHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 6899999999997653 10 0 134567788888998887654 3455543
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.18 E-value=1.4e-05 Score=65.92 Aligned_cols=140 Identities=13% Similarity=0.089 Sum_probs=91.2
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhC-CcEEEEecCCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTG-GRKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~G-ar~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
...+++|++|+||-... .. .+.....-..+| ++++++.++-|...- -.+|++++-||+...-..+... .+
T Consensus 68 ~p~lvtVffGaNDs~l~---~~-~~~~~hvPl~Ey----~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~-e~ 138 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLP---EP-SSLGQHVPLEEY----KDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQ-EP 138 (245)
T ss_pred CceEEEEEecCccccCC---CC-CCCCCccCHHHH----HHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhc-cc
Confidence 45789999999996653 11 111122333444 566777777776654 3467787777776554433321 11
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
......+.|+....|+.++....+++ ++.++|..+.+++.-
T Consensus 139 ~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~-------------------------------- 179 (245)
T KOG3035|consen 139 YVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESD-------------------------------- 179 (245)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcc--------------------------------
Confidence 11223467888999998888877654 477889877776621
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
+-.+-.||||+|.|..|++++.++++...
T Consensus 180 --------dw~~~~ltDGLHlS~~G~~ivf~Ei~kvl 208 (245)
T KOG3035|consen 180 --------DWQTSCLTDGLHLSPKGNKIVFDEILKVL 208 (245)
T ss_pred --------cHHHHHhccceeeccccchhhHHHHHHHH
Confidence 12233579999999999999999998864
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.94 E-value=0.00015 Score=60.21 Aligned_cols=22 Identities=18% Similarity=0.142 Sum_probs=20.5
Q ss_pred cCCCCchHHHHHHHHHHHhcCC
Q 045703 206 WDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 206 wD~vHPT~~~h~~iA~~~~~~~ 227 (247)
+|++||+.+||+.||+.+.+..
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~l 208 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEVL 208 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHHH
Confidence 8999999999999999998865
No 38
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.01 E-value=0.0089 Score=52.45 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=75.8
Q ss_pred cccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhC---CcEEEEecCCCCCcccchhhc
Q 045703 30 RISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTG---GRKFAFMNVPDLGCLPVMRIM 106 (247)
Q Consensus 30 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~G---ar~~~v~~lppl~~~P~~~~~ 106 (247)
..+-+.+++++|.||.+.. ...+ .. .....++ =.+.+..-+.+|.+.- --+++.+++|++-
T Consensus 175 ~~~~a~vVV~lGaND~q~~-~~gd-~~--~kf~S~~----W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r-------- 238 (354)
T COG2845 175 HPKPAAVVVMLGANDRQDF-KVGD-VY--EKFRSDE----WTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR-------- 238 (354)
T ss_pred cCCccEEEEEecCCCHHhc-ccCC-ee--eecCchH----HHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc--------
Confidence 3366788999999999984 3222 10 1111122 2444555555554432 2257788876532
Q ss_pred ccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhC-CCCCCccccccceeecccCCCcccc
Q 045703 107 NTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINH-PFKYGFKEGKAACCGTGQFRGVLSC 185 (247)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~-P~~yGf~~~~~~Cc~~g~~~~~~~c 185 (247)
.+.++.-...+|.-.++.++.+. |- ++|.+.-|-+.-.+ -..+|+. .|+
T Consensus 239 --------~~~l~~dm~~ln~iy~~~vE~~~----gk---~i~i~d~~v~e~G~~f~~~~~D-----------~NG---- 288 (354)
T COG2845 239 --------KKKLNADMVYLNKIYSKAVEKLG----GK---FIDIWDGFVDEGGKDFVTTGVD-----------ING---- 288 (354)
T ss_pred --------ccccchHHHHHHHHHHHHHHHhC----Ce---EEEecccccccCCceeEEeccc-----------cCC----
Confidence 13445557789988888877653 32 34444333222111 1111110 010
Q ss_pred CCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 186 GGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 186 ~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
.+=++.-=||+|.|.+|.+.+|.++..-
T Consensus 289 -------------q~vrlR~~DGIh~T~~Gkrkla~~~~k~ 316 (354)
T COG2845 289 -------------QPVRLRAKDGIHFTKEGKRKLAFYLEKP 316 (354)
T ss_pred -------------ceEEEeccCCceechhhHHHHHHHHHHH
Confidence 1223334499999999999999988754
No 39
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.66 E-value=0.0065 Score=49.35 Aligned_cols=117 Identities=13% Similarity=0.095 Sum_probs=49.4
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhC-CcEEEEecCCCCCcccchhhcccCC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTG-GRKFAFMNVPDLGCLPVMRIMNTEK 110 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~G-ar~~~v~~lppl~~~P~~~~~~~~~ 110 (247)
+.++|++-.|.| +.. +.+..++...|++|.+.- ..-|+++...+ ....
T Consensus 59 ~a~~~~ld~~~N--~~~-------------------~~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~-------- 107 (178)
T PF14606_consen 59 DADLIVLDCGPN--MSP-------------------EEFRERLDGFVKTIREAHPDTPILLVSPIP--YPAG-------- 107 (178)
T ss_dssp --SEEEEEESHH--CCT-------------------TTHHHHHHHHHHHHHTT-SSS-EEEEE------TTT--------
T ss_pred CCCEEEEEeecC--CCH-------------------HHHHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc--------
Confidence 458899999998 221 124566677788887643 45666654222 1111
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeecccCCCccccCCCCC
Q 045703 111 NGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGTGQFRGVLSCGGKRP 190 (247)
Q Consensus 111 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~g~~~~~~~c~~~~~ 190 (247)
............+|+.+++.+++++++ ..-++.++|-..++-+-
T Consensus 108 --~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~d--------------------------------- 151 (178)
T PF14606_consen 108 --YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGDD--------------------------------- 151 (178)
T ss_dssp --TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS------------------------------------
T ss_pred --ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCcc---------------------------------
Confidence 111222234778999999999998754 46678898876543210
Q ss_pred CCccccCCCCCCceecCCCCchHHHHHHHHHHHhcC
Q 045703 191 VKEFELCENPNEYVYWDSIHLTEMANKQLAREMWNG 226 (247)
Q Consensus 191 ~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~ 226 (247)
.-...|++|||..||..||+.+..-
T Consensus 152 -----------~e~tvDgvHP~DlG~~~~a~~l~~~ 176 (178)
T PF14606_consen 152 -----------HEATVDGVHPNDLGMMRMADALEPV 176 (178)
T ss_dssp ------------------------------------
T ss_pred -----------ccccccccccccccccccccccccc
Confidence 1123599999999999999987653
No 40
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.40 E-value=0.15 Score=46.19 Aligned_cols=28 Identities=21% Similarity=0.420 Sum_probs=24.0
Q ss_pred CCCceecCCCCchHHHHHHHHHHHhcCC
Q 045703 200 PNEYVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 200 ~~~ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
..+++--|-+|.++.||.++|.+++.+.
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNnl 350 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNNL 350 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHHh
Confidence 3456667999999999999999999975
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.25 E-value=0.23 Score=40.31 Aligned_cols=20 Identities=20% Similarity=0.393 Sum_probs=18.3
Q ss_pred cCCCCchHHHHHHHHHHHhc
Q 045703 206 WDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 206 wD~vHPT~~~h~~iA~~~~~ 225 (247)
.|++|.++.||+.|++.+++
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 39999999999999999876
No 42
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=89.92 E-value=2.1 Score=36.79 Aligned_cols=139 Identities=12% Similarity=0.170 Sum_probs=80.0
Q ss_pred cccCceEEEEeccccccchhhhccC------ccc-ccCcccc------chHHHHHHHHHHHHHHHHHhCCcEEEEecCCC
Q 045703 30 RISRGVYLFSIGSNDYYAKILLTKG------FTI-LNSFSES------NHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPD 96 (247)
Q Consensus 30 ~~~~sL~~i~iG~ND~~~~~~~~~~------~~~-~~~~~~~------~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lpp 96 (247)
...-++++|..|..=.|.. ...+ +.. ....+.. -.++++++.+...++.|....-.-=+|+++.|
T Consensus 99 l~~ad~~iiTLGtaevw~~--~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSP 176 (251)
T PF08885_consen 99 LEEADVFIITLGTAEVWRD--RETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSP 176 (251)
T ss_pred HHhCCEEEEeCCcHHHhee--CCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEecc
Confidence 4567889999999888763 2210 011 1111111 12566777787888888776654335666777
Q ss_pred CCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHHHhCCCCCCccccccceeec
Q 045703 97 LGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKRINHPFKYGFKEGKAACCGT 176 (247)
Q Consensus 97 l~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~P~~yGf~~~~~~Cc~~ 176 (247)
+-.+-.+.. .. .-..|++++ +.|+..+.+|....+ ++.||-.|.++.+-+.++.
T Consensus 177 Vrl~~T~~~-----~d--~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrdyr-------------- 230 (251)
T PF08885_consen 177 VRLIATFRD-----RD--GLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELRDYR-------------- 230 (251)
T ss_pred chhhccccc-----cc--chhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCcccccc--------------
Confidence 433322211 11 112233333 456677777776544 5789999888765433211
Q ss_pred ccCCCccccCCCCCCCccccCCCCCCceecCCCCchHHHHHHHHHH
Q 045703 177 GQFRGVLSCGGKRPVKEFELCENPNEYVYWDSIHLTEMANKQLARE 222 (247)
Q Consensus 177 g~~~~~~~c~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~ 222 (247)
|+=-|-.|||+.+-..+.+.
T Consensus 231 --------------------------fy~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 231 --------------------------FYAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred --------------------------cccccCCCCCHHHHHHHHhh
Confidence 11128999999998888764
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=82.90 E-value=3.6 Score=32.58 Aligned_cols=62 Identities=13% Similarity=0.193 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEee---c
Q 045703 74 LTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFD---L 150 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D---~ 150 (247)
+.+.|++|.+.|+++|+| +|+++.... .....+...+.+++.++|+.+|.+.. .
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G~---------------H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~ 116 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPGR---------------HWQEDIPALTAEAAKEHPGVKYLVTAPIGL 116 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCCc---------------chHhHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 667788888899999988 488876421 12345677788888889998887653 3
Q ss_pred cHHHHHHH
Q 045703 151 NSSLRKRI 158 (247)
Q Consensus 151 ~~~~~~~~ 158 (247)
+..+.+++
T Consensus 117 ~p~l~~ll 124 (154)
T PLN02757 117 HELMVDVV 124 (154)
T ss_pred CHHHHHHH
Confidence 34454544
No 44
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=73.73 E-value=6.7 Score=28.18 Aligned_cols=53 Identities=13% Similarity=0.271 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEee
Q 045703 74 LTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFD 149 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 149 (247)
+.+.+++|.+.|+++++|. |.+..... .....+...++.++.++++.++.+.+
T Consensus 46 ~~~~l~~l~~~g~~~v~vv--------Plfl~~G~---------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 46 LAEALDELAAQGATRIVVV--------PLFLLAGG---------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHHcCCCEEEEE--------eeEeCCCc---------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 4467888888999999884 77775321 12245566666666678888776654
No 45
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=68.51 E-value=14 Score=31.14 Aligned_cols=83 Identities=18% Similarity=0.212 Sum_probs=48.8
Q ss_pred EEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHH
Q 045703 38 FSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEK 117 (247)
Q Consensus 38 i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~ 117 (247)
|+.|.+..... |-. + .+.. .+...+-+.+.++.|...|.|+|+++|-- ++.
T Consensus 62 i~yG~s~~h~~-fpG---T----isl~--~~t~~~~l~di~~sl~~~Gf~~ivivngH----------------gGN--- 112 (237)
T PF02633_consen 62 IPYGCSPHHMG-FPG---T----ISLS--PETLIALLRDILRSLARHGFRRIVIVNGH----------------GGN--- 112 (237)
T ss_dssp B--BB-GCCTT-STT--------BBB---HHHHHHHHHHHHHHHHHHT--EEEEEESS----------------TTH---
T ss_pred CccccCcccCC-CCC---e----EEeC--HHHHHHHHHHHHHHHHHcCCCEEEEEECC----------------HhH---
Confidence 46787776654 321 1 2222 23345557788889999999999997621 111
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHH
Q 045703 118 ATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKR 157 (247)
Q Consensus 118 ~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~ 157 (247)
...|...+++|+.++++..+.++|.+.+....
T Consensus 113 --------~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 113 --------IAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp --------HHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred --------HHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 12456666777777789999999998876554
No 46
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=66.63 E-value=16 Score=32.32 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEecCCC
Q 045703 67 VGMVIGNLTTVIKEIYKTGGRKFAFMNVPD 96 (247)
Q Consensus 67 ~~~~~~~~~~~v~~L~~~Gar~~~v~~lpp 96 (247)
....++.+.+.++++.++|++-|++.++|+
T Consensus 56 ~r~s~d~l~~~~~~~~~lGi~av~LFgvp~ 85 (330)
T COG0113 56 YRYSLDRLVEEAEELVDLGIPAVILFGVPD 85 (330)
T ss_pred eeccHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 344578889999999999999999999986
No 47
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=66.02 E-value=3.3 Score=30.02 Aligned_cols=53 Identities=9% Similarity=0.227 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeec
Q 045703 75 TTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDL 150 (247)
Q Consensus 75 ~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 150 (247)
.+.+++|.+.|+++|+|+ |.++... ......+.+.++.++..+|+.++.+...
T Consensus 40 ~~~l~~l~~~g~~~ivvv--------P~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 40 EEALERLVAQGARRIVVV--------PYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HHCCHHHHCCTCSEEEEE--------EESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHHHcCCCeEEEE--------eeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 356688888899999884 8887531 1122346778888888888887776543
No 48
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=63.86 E-value=28 Score=30.84 Aligned_cols=65 Identities=9% Similarity=0.202 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 045703 68 GMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSL 147 (247)
Q Consensus 68 ~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 147 (247)
...++.+.+.++++.++|.+.|++.++|+. ..+.- .++ .+ =|.-+...+..+++.+|+. +++
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~g--------s~A---~~-----~~g~v~~air~iK~~~p~l-~vi 108 (314)
T cd00384 47 RLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIG--------SEA---YD-----PDGIVQRAIRAIKEAVPEL-VVI 108 (314)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCc--------ccc---cC-----CCChHHHHHHHHHHhCCCc-EEE
Confidence 335788899999999999999999998642 12110 000 00 1234556667777778875 334
Q ss_pred eec
Q 045703 148 FDL 150 (247)
Q Consensus 148 ~D~ 150 (247)
.|.
T Consensus 109 ~Dv 111 (314)
T cd00384 109 TDV 111 (314)
T ss_pred Eee
Confidence 444
No 49
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=62.04 E-value=21 Score=31.71 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 045703 68 GMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSL 147 (247)
Q Consensus 68 ~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 147 (247)
...++.+.+.++++.++|++.|++.++|+. .-+.- .++ ..=|.-+...+..+++.+|+.- ++
T Consensus 57 r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~g--------s~A--------~~~~g~v~~air~iK~~~pdl~-vi 118 (322)
T PRK13384 57 RLPESALADEIERLYALGIRYVMPFGISHH-KDAKG--------SDT--------WDDNGLLARMVRTIKAAVPEMM-VI 118 (322)
T ss_pred eECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCc--------ccc--------cCCCChHHHHHHHHHHHCCCeE-EE
Confidence 335788889999999999999999998642 22110 000 0013445666777788888763 44
Q ss_pred eec
Q 045703 148 FDL 150 (247)
Q Consensus 148 ~D~ 150 (247)
.|+
T Consensus 119 ~DV 121 (322)
T PRK13384 119 PDI 121 (322)
T ss_pred eee
Confidence 454
No 50
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=61.00 E-value=37 Score=30.21 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 045703 68 GMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSL 147 (247)
Q Consensus 68 ~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 147 (247)
...++.+.+.++++.++|.+.|++.++|.. ..+.-. + ..+ =|.-+...++.+++.+|+. +++
T Consensus 55 r~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs--------~---A~~-----~~g~v~rair~iK~~~p~l-~vi 116 (323)
T PRK09283 55 RLSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGS--------E---AYN-----PDGLVQRAIRAIKKAFPEL-GVI 116 (323)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccc--------c---ccC-----CCCHHHHHHHHHHHhCCCc-EEE
Confidence 335778889999999999999999988432 111110 0 000 1234566777777888876 344
Q ss_pred eec
Q 045703 148 FDL 150 (247)
Q Consensus 148 ~D~ 150 (247)
.|.
T Consensus 117 ~DV 119 (323)
T PRK09283 117 TDV 119 (323)
T ss_pred Eee
Confidence 454
No 51
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=60.74 E-value=4.7 Score=36.46 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=50.2
Q ss_pred cccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhh
Q 045703 30 RISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRI 105 (247)
Q Consensus 30 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~ 105 (247)
...+.++.-|+|+||+... -.. . .+...-.-+......+..++..++.++...|+..+.|.++..|....
T Consensus 96 ~~~~~~~~~~a~gnd~A~g-ga~--~---~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 96 ADPNGLYIHWAGGNDLAVG-GAR--S---TEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cCcccccCcccccccHhhh-ccc--c---ccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 4467889999999998875 111 1 11111122333455677889999999999999999999999998765
No 52
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=59.83 E-value=23 Score=31.38 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCC-cccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 045703 68 GMVIGNLTTVIKEIYKTGGRKFAFMNVPDLG-CLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYS 146 (247)
Q Consensus 68 ~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~-~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 146 (247)
...++.+.+.++++.++|.+.|++.+++|-. .-+.-. ++ .+ =|.-+...+..+++.+|+. ++
T Consensus 50 r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~gs--------~A---~~-----~~g~v~~air~iK~~~p~l-~v 112 (320)
T cd04823 50 RLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDGS--------EA---YN-----PDNLVCRAIRAIKEAFPEL-GI 112 (320)
T ss_pred eeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcccc--------cc---cC-----CCChHHHHHHHHHHhCCCc-EE
Confidence 3357888899999999999999999985411 222110 00 00 1234566677777778875 34
Q ss_pred Eeec
Q 045703 147 LFDL 150 (247)
Q Consensus 147 ~~D~ 150 (247)
+.|.
T Consensus 113 i~DV 116 (320)
T cd04823 113 ITDV 116 (320)
T ss_pred EEee
Confidence 4454
No 53
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=59.29 E-value=23 Score=31.37 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEecCCC
Q 045703 69 MVIGNLTTVIKEIYKTGGRKFAFMNVPD 96 (247)
Q Consensus 69 ~~~~~~~~~v~~L~~~Gar~~~v~~lpp 96 (247)
..++.+.+.++++.++|++.|++.++|+
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~ 75 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPL 75 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCc
Confidence 3577888999999999999999999874
No 54
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=59.15 E-value=41 Score=24.64 Aligned_cols=49 Identities=18% Similarity=0.423 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 045703 74 LTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSL 147 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 147 (247)
+.+.+++|.+.|.++++| .|.+.... . +...+...+++++.+ |+.++.+
T Consensus 47 ~~~~l~~l~~~g~~~i~v--------vP~fL~~G-----~-----------h~~~i~~~~~~~~~~-~~~~i~~ 95 (117)
T cd03414 47 LPEALERLRALGARRVVV--------LPYLLFTG-----V-----------LMDRIEEQVAELAAE-PGIEFVL 95 (117)
T ss_pred HHHHHHHHHHcCCCEEEE--------EechhcCC-----c-----------hHHHHHHHHHHHHhC-CCceEEE
Confidence 557788888899999988 48777531 0 112355566666666 6666554
No 55
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=59.05 E-value=1e+02 Score=25.56 Aligned_cols=114 Identities=15% Similarity=0.070 Sum_probs=53.0
Q ss_pred cCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCC--cEEEEecCCCCCcccchhhcccC
Q 045703 32 SRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGG--RKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Ga--r~~~v~~lppl~~~P~~~~~~~~ 109 (247)
..+++++.+|..+.-...+... ........... ....+..+...+.++.+... .++++-+++|.... .....
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~-~~~~~~~~~~~-y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~--~~~~~-- 173 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEW-GDNKEINPLEA-YRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFE--GGDWN-- 173 (263)
T ss_pred CCCEEEEEcchhhhhcchhccc-CCCcCcchHHH-HHHHHHHHHHHHHhhhccccccceEEEEecCCcccc--ccccc--
Confidence 6888888888888654201000 00000011112 23334445555555554443 56777766653311 11000
Q ss_pred CCCcch-----HHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeeccHHHHHH
Q 045703 110 KNGSCL-----EKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLNSSLRKR 157 (247)
Q Consensus 110 ~~~~~~-----~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~ 157 (247)
.++.|. ...+.....+|..+...+ ..+.++.++|+.......
T Consensus 174 ~gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~ 220 (263)
T PF13839_consen 174 SGGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSF 220 (263)
T ss_pred cCCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhc
Confidence 012222 122344555555555543 146678899995444443
No 56
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=58.28 E-value=40 Score=30.03 Aligned_cols=66 Identities=15% Similarity=0.232 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Q 045703 69 MVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLF 148 (247)
Q Consensus 69 ~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 148 (247)
..++.+.+.++++.++|++.|++.++.+ |...... +.++ . .=|.-+...+..+++.+|+. +++.
T Consensus 54 ~sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~---gs~a---~-----~~~g~v~~air~iK~~~pdl-~vi~ 117 (324)
T PF00490_consen 54 YSIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE---GSEA---Y-----NPDGLVQRAIRAIKKAFPDL-LVIT 117 (324)
T ss_dssp EEHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS----GGG---G-----STTSHHHHHHHHHHHHSTTS-EEEE
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc---hhcc---c-----CCCChHHHHHHHHHHhCCCc-EEEE
Confidence 3578889999999999999999988743 3222211 0000 0 01234566777788888886 4556
Q ss_pred ec
Q 045703 149 DL 150 (247)
Q Consensus 149 D~ 150 (247)
|.
T Consensus 118 Dv 119 (324)
T PF00490_consen 118 DV 119 (324)
T ss_dssp EE
T ss_pred ec
Confidence 65
No 57
>PRK13660 hypothetical protein; Provisional
Probab=54.57 E-value=75 Score=25.91 Aligned_cols=59 Identities=5% Similarity=0.063 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 045703 66 HVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKY 145 (247)
Q Consensus 66 ~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 145 (247)
-+..+...+...|.++++.|.+.|++.+ . ..+-..-.+.+-+|++++|+.++
T Consensus 23 ~~~~IK~aL~~~l~~~~e~G~~wfi~gg--a--------------------------lG~d~wAaEvvl~LK~~yp~lkL 74 (182)
T PRK13660 23 KIKYIKKAIKRKLIALLEEGLEWVIISG--Q--------------------------LGVELWAAEVVLELKEEYPDLKL 74 (182)
T ss_pred hhHHHHHHHHHHHHHHHHCCCCEEEECC--c--------------------------chHHHHHHHHHHHHHhhCCCeEE
Confidence 3555777888999999999999887743 1 11223335566667777888877
Q ss_pred EEeeccH
Q 045703 146 SLFDLNS 152 (247)
Q Consensus 146 ~~~D~~~ 152 (247)
..+=.+.
T Consensus 75 ~~~~PF~ 81 (182)
T PRK13660 75 AVITPFE 81 (182)
T ss_pred EEEeCcc
Confidence 7665543
No 58
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=51.44 E-value=34 Score=27.76 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEe
Q 045703 66 HVGMVIGNLTTVIKEIYKTGGRKFAFM 92 (247)
Q Consensus 66 ~~~~~~~~~~~~v~~L~~~Gar~~~v~ 92 (247)
-+..+...+.+.|.+|++.|.+.|+.-
T Consensus 23 ~~~~ik~~L~~~i~~lie~G~~~fi~G 49 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEEGVRWFITG 49 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--EEEE-
T ss_pred hHHHHHHHHHHHHHHHHHCCCCEEEEC
Confidence 356678889999999999999988774
No 59
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=46.13 E-value=37 Score=29.58 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=55.1
Q ss_pred cccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccC
Q 045703 30 RISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTE 109 (247)
Q Consensus 30 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~ 109 (247)
..++=+|=++|-.||--.. =... .+....-=+.++.+.|..|.+.|.|.+++.++|| |......
T Consensus 37 s~~nliyPlFI~e~~dd~~-pI~S---------mPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~~-- 100 (340)
T KOG2794|consen 37 SPANLIYPLFIHEGEDDFT-PIDS---------MPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDPT-- 100 (340)
T ss_pred ChhheeeeEEEecCccccc-cccc---------CCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCcc--
Confidence 4456677788877764322 1111 1111122366788999999999999999999875 3332211
Q ss_pred CCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeec
Q 045703 110 KNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDL 150 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 150 (247)
++. +..=|.-+-..+..|+..+|+. ++..|.
T Consensus 101 --gs~-------Ads~~gpvi~ai~~lr~~fPdL-~i~cDV 131 (340)
T KOG2794|consen 101 --GSE-------ADSDNGPVIRAIRLLRDRFPDL-VIACDV 131 (340)
T ss_pred --ccc-------ccCCCCcHHHHHHHHHHhCcce-EEEeee
Confidence 110 1112334455667777788886 444444
No 60
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=44.79 E-value=89 Score=23.61 Aligned_cols=21 Identities=5% Similarity=0.066 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEe
Q 045703 72 GNLTTVIKEIYKTGGRKFAFM 92 (247)
Q Consensus 72 ~~~~~~v~~L~~~Gar~~~v~ 92 (247)
..+.+.+++|.+.|.++|+|.
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~ 76 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQ 76 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEE
Confidence 446789999999999999995
No 61
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=38.68 E-value=55 Score=28.81 Aligned_cols=16 Identities=44% Similarity=0.694 Sum_probs=13.1
Q ss_pred cCceEEEEeccccccc
Q 045703 32 SRGVYLFSIGSNDYYA 47 (247)
Q Consensus 32 ~~sL~~i~iG~ND~~~ 47 (247)
.+-+=+++||+||+..
T Consensus 195 ~~~~DF~SIGtNDLtQ 210 (293)
T PF02896_consen 195 AKEVDFFSIGTNDLTQ 210 (293)
T ss_dssp HTTSSEEEEEHHHHHH
T ss_pred HHHCCEEEEChhHHHH
Confidence 3447789999999887
No 62
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=37.67 E-value=1.3e+02 Score=27.14 Aligned_cols=73 Identities=15% Similarity=0.238 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecc
Q 045703 74 LTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDLN 151 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 151 (247)
+...++.|.+.+..-++++++-.+.++|..+..+..+.+...+........++.. ++..-.+...+++++|..
T Consensus 90 lr~~~~~l~~~~l~~~~iPgVi~LptVP~~RK~N~IDmGTaDKva~a~lai~~~~-----~~~gi~y~~~nfIlvEiG 162 (343)
T PF07318_consen 90 LRKLVRELAESNLPAYFIPGVIHLPTVPAWRKINRIDMGTADKVASAALAIYDQA-----EREGIEYREVNFILVEIG 162 (343)
T ss_pred HHHHHHHHHhCCCCEEEeCceeccCCCchHhhhcccccCcHhHHHHHHHHHHhhH-----HhhCCCcccceEEEEEcc
Confidence 6777888888888999999999999999998877655444433333322222222 222223556788898885
No 63
>PF04311 DUF459: Protein of unknown function (DUF459); InterPro: IPR007407 This is a putative periplasmic protein.
Probab=37.48 E-value=1.4e+02 Score=26.85 Aligned_cols=25 Identities=36% Similarity=0.240 Sum_probs=17.4
Q ss_pred ceecCCCCchHHHHHHHHHHHhcCC
Q 045703 203 YVYWDSIHLTEMANKQLAREMWNGA 227 (247)
Q Consensus 203 ylfwD~vHPT~~~h~~iA~~~~~~~ 227 (247)
..--|+.|.|.+|.++++..+..|.
T Consensus 296 ~~~sdg~h~t~~G~~~~~~~~~~gr 320 (327)
T PF04311_consen 296 LRDSDGIHLTVEGEKYLMPEAPPGR 320 (327)
T ss_pred cccCCcceEEeeccccccccCCchh
Confidence 3445888888888887777666654
No 64
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=35.49 E-value=96 Score=21.24 Aligned_cols=15 Identities=20% Similarity=0.383 Sum_probs=11.6
Q ss_pred hCCcEEEEecCCCCC
Q 045703 84 TGGRKFAFMNVPDLG 98 (247)
Q Consensus 84 ~Gar~~~v~~lppl~ 98 (247)
-|+|.|+++.+|=..
T Consensus 9 p~arSvIv~a~~Y~~ 23 (78)
T PF08331_consen 9 PGARSVIVLAFPYYP 23 (78)
T ss_pred CCCcEEEEEEccCCC
Confidence 489999999877544
No 65
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=35.17 E-value=51 Score=24.03 Aligned_cols=23 Identities=13% Similarity=0.273 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHhCCcEEEEec
Q 045703 71 IGNLTTVIKEIYKTGGRKFAFMN 93 (247)
Q Consensus 71 ~~~~~~~v~~L~~~Gar~~~v~~ 93 (247)
-+.+.+.+.+|.++||+-|++..
T Consensus 73 ~~~v~~~~~~Lk~~GA~~Ilv~~ 95 (100)
T TIGR03455 73 EKVVNELIDKLKAAGARDILVLP 95 (100)
T ss_pred HHHHHHHHHHHHHcCCCeEEEec
Confidence 35677899999999999999964
No 66
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=34.07 E-value=37 Score=26.07 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=20.9
Q ss_pred CCCceecCCCCchHHHHHHHHHHHhc
Q 045703 200 PNEYVYWDSIHLTEMANKQLAREMWN 225 (247)
Q Consensus 200 ~~~ylfwD~vHPT~~~h~~iA~~~~~ 225 (247)
-+.|++-|.+||..+|+-.+-+.+..
T Consensus 100 y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 100 YEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp TSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCCceeeecccCchhhHHHHHHHHHH
Confidence 45788899999999999888887754
No 67
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=33.77 E-value=37 Score=23.41 Aligned_cols=21 Identities=5% Similarity=0.279 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhCCcEEEEecC
Q 045703 74 LTTVIKEIYKTGGRKFAFMNV 94 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~l 94 (247)
+.+.+.+|.++||+-|++..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 557788999999999999754
No 68
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=33.23 E-value=1.2e+02 Score=25.38 Aligned_cols=23 Identities=17% Similarity=0.358 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCcEEEEecCCCC
Q 045703 75 TTVIKEIYKTGGRKFAFMNVPDL 97 (247)
Q Consensus 75 ~~~v~~L~~~Gar~~~v~~lppl 97 (247)
...++...+.|+.-|+++.+||-
T Consensus 113 e~~iq~ak~aGanGfiivDlPpE 135 (268)
T KOG4175|consen 113 ENYIQVAKNAGANGFIIVDLPPE 135 (268)
T ss_pred HHHHHHHHhcCCCceEeccCChH
Confidence 35566777899999999999983
No 69
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=30.87 E-value=57 Score=24.35 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCcccchhhc
Q 045703 74 LTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIM 106 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~ 106 (247)
+.+.+++|.+.|.++|+|. |.+...
T Consensus 48 l~~~l~~l~~~g~~~v~vv--------Plfl~~ 72 (126)
T PRK00923 48 IPEALKKLIGTGADKIIVV--------PVFLAH 72 (126)
T ss_pred HHHHHHHHHHcCCCEEEEE--------chhhcc
Confidence 6688889999999999884 666653
No 70
>PLN02825 amino-acid N-acetyltransferase
Probab=30.58 E-value=4.4e+02 Score=25.21 Aligned_cols=58 Identities=7% Similarity=0.123 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhCcHHHhhcccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCc
Q 045703 8 LSYYKKVESWLREKLGNDEGRMRISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGR 87 (247)
Q Consensus 8 v~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar 87 (247)
|+||.+...-+.. + .+..++|.+|++=+... ...++...|..|..+|.|
T Consensus 2 v~~fr~a~pYI~~---------~-rgktfVIk~gG~~l~~~---------------------~~~~l~~DialL~~lGi~ 50 (515)
T PLN02825 2 VRWFREAWPYIQG---------H-RGSTFVVVISGEVVAGP---------------------HLDNILQDISLLHGLGIK 50 (515)
T ss_pred hhHHHhhhHHHHH---------H-CCCEEEEEECchhhcCc---------------------hHHHHHHHHHHHHHCCCC
Confidence 5677776544333 2 35668888888653321 134566778888899999
Q ss_pred EEEEecCCC
Q 045703 88 KFAFMNVPD 96 (247)
Q Consensus 88 ~~~v~~lpp 96 (247)
-|+|-+-.|
T Consensus 51 ~VlVHGggp 59 (515)
T PLN02825 51 FVLVPGTHV 59 (515)
T ss_pred EEEEcCCCH
Confidence 999988775
No 71
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=28.67 E-value=22 Score=23.26 Aligned_cols=8 Identities=63% Similarity=1.473 Sum_probs=6.9
Q ss_pred ecCCCCch
Q 045703 205 YWDSIHLT 212 (247)
Q Consensus 205 fwD~vHPT 212 (247)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 68999996
No 72
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase. This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.
Probab=28.53 E-value=84 Score=30.39 Aligned_cols=14 Identities=50% Similarity=0.702 Sum_probs=12.2
Q ss_pred ceEEEEeccccccc
Q 045703 34 GVYLFSIGSNDYYA 47 (247)
Q Consensus 34 sL~~i~iG~ND~~~ 47 (247)
.+=+++||.||+..
T Consensus 444 ~vDf~sIGtnDLsq 457 (565)
T TIGR01417 444 EVDFFSIGTNDLTQ 457 (565)
T ss_pred hCCEEEEChhHHHH
Confidence 67789999999977
No 73
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]
Probab=27.61 E-value=18 Score=34.70 Aligned_cols=22 Identities=32% Similarity=0.486 Sum_probs=16.7
Q ss_pred hcccCceEEEEeccccccchhhhc
Q 045703 29 MRISRGVYLFSIGSNDYYAKILLT 52 (247)
Q Consensus 29 ~~~~~sL~~i~iG~ND~~~~~~~~ 52 (247)
....+-+=+++||+||+.. |..
T Consensus 441 ~~lakevDFfSIGTNDLtQ--YtL 462 (574)
T COG1080 441 DQLAKEVDFFSIGTNDLTQ--YTL 462 (574)
T ss_pred HHHHHhCCEeeecccHHHH--HHH
Confidence 4455667789999999888 544
No 74
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=27.08 E-value=1.1e+02 Score=23.43 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=22.2
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHhC
Q 045703 115 LEKATSLAKLHNEALSKQLFDLQKQL 140 (247)
Q Consensus 115 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 140 (247)
.+..+.++..||+.|.+.|.++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45667889999999999999998764
No 75
>PF11691 DUF3288: Protein of unknown function (DUF3288); InterPro: IPR021705 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=25.95 E-value=60 Score=23.28 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=29.7
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCCcccCcChhHhhcc--cC
Q 045703 207 DSIHLTEMANKQLAREMWNGARNSHVIGPYNLKKLFQI--RY 246 (247)
Q Consensus 207 D~vHPT~~~h~~iA~~~~~~~~~~~~~~p~~~~~l~~~--~~ 246 (247)
|..||-.+--+.+-+.++.+. ..+.|+.+||++ ||
T Consensus 2 dQ~HP~~~~DR~~vd~Ll~~~-----p~d~~L~eLARL~iRY 38 (90)
T PF11691_consen 2 DQQHPQYKTDREIVDRLLAGE-----PTDYNLAELARLRIRY 38 (90)
T ss_pred CccCcchhhhHHHHHHHHcCC-----CCchhHHHHHHHHHHh
Confidence 567999999999999999863 678899999987 55
No 76
>COG1031 Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
Probab=24.08 E-value=3.2e+02 Score=25.95 Aligned_cols=25 Identities=20% Similarity=0.420 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhCCcEEEEecCC
Q 045703 71 IGNLTTVIKEIYKTGGRKFAFMNVP 95 (247)
Q Consensus 71 ~~~~~~~v~~L~~~Gar~~~v~~lp 95 (247)
.+.+...|+.||++|+|+|=+---+
T Consensus 217 ~e~Vv~EVkaLY~~GvrhFRlGRQ~ 241 (560)
T COG1031 217 PEDVVEEVKALYRAGVRHFRLGRQA 241 (560)
T ss_pred HHHHHHHHHHHHHhccceeeecccc
Confidence 4556788999999999998664433
No 77
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=24.03 E-value=1.1e+02 Score=26.30 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEec
Q 045703 68 GMVIGNLTTVIKEIYKTGGRKFAFMN 93 (247)
Q Consensus 68 ~~~~~~~~~~v~~L~~~Gar~~~v~~ 93 (247)
+.++.-+.+..+.|+..|.|+|+++|
T Consensus 86 ~t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 86 ETLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHHhcCccEEEEEe
Confidence 44566677888999999999999987
No 78
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=23.00 E-value=1.5e+02 Score=19.48 Aligned_cols=27 Identities=30% Similarity=0.396 Sum_probs=19.8
Q ss_pred eEEEeeccHHHHHHH--hCCCCCCccccc
Q 045703 144 KYSLFDLNSSLRKRI--NHPFKYGFKEGK 170 (247)
Q Consensus 144 ~i~~~D~~~~~~~~~--~~P~~yGf~~~~ 170 (247)
.+.+-++...+.... -+|..|||.+..
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~l~ 51 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSSLS 51 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSSHH
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCcHH
Confidence 577888888887777 468999998643
No 79
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=22.65 E-value=3.6e+02 Score=23.40 Aligned_cols=46 Identities=4% Similarity=0.060 Sum_probs=35.7
Q ss_pred ccCceEEEEeccccccchhhhccCcccccCccccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCC
Q 045703 31 ISRGVYLFSIGSNDYYAKILLTKGFTILNSFSESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPD 96 (247)
Q Consensus 31 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lpp 96 (247)
.+...++|-+|+|=+-.. ...+.+...|..|...|.+-|+|.+-.|
T Consensus 33 ~~~~f~VIK~GG~~~~~~--------------------~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 33 DWPAFAVLEVDHSVFRSL--------------------EMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCCEEEEEEChhhhcCc--------------------hhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 357889999999864321 1355677888999999999999999876
No 80
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=22.43 E-value=2.4e+02 Score=25.21 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCC-CcccchhhcccCCCCcchHHHhH-H-----------------HHHHHHHHHHHHH
Q 045703 74 LTTVIKEIYKTGGRKFAFMNVPDL-GCLPVMRIMNTEKNGSCLEKATS-L-----------------AKLHNEALSKQLF 134 (247)
Q Consensus 74 ~~~~v~~L~~~Gar~~~v~~lppl-~~~P~~~~~~~~~~~~~~~~~~~-~-----------------~~~~N~~L~~~l~ 134 (247)
+.+.|++|.+.|.++++++-+-|- +++-. +...+.+.+ + -..|..++.+.++
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyPqyS~sTt---------~s~~~~~~~al~~~~~~~~i~~I~~~~~~p~yI~a~a~~I~ 174 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYPQYSSSTT---------GSYVDELARALKELRGQPKISTIPDYYDEPLYIEALADSIR 174 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCcccccccH---------HHHHHHHHHHHHhcCCCCceEEecCccCChHHHHHHHHHHH
Confidence 347788899999999988765542 22211 000110100 0 2345666666665
Q ss_pred HHHHhCC-CCeEEEeeccHHHHHHHhC
Q 045703 135 DLQKQLK-GFKYSLFDLNSSLRKRINH 160 (247)
Q Consensus 135 ~l~~~~~-~~~i~~~D~~~~~~~~~~~ 160 (247)
+--++.+ +-..++|..+++=...++.
T Consensus 175 ~~~~~~~~~~~~llfSaHglP~~~~~~ 201 (320)
T COG0276 175 EKLAKHPRDDDVLLFSAHGLPKRYIDE 201 (320)
T ss_pred HHHHhcCCCCeEEEEecCCCchhhhhc
Confidence 4444444 4457788888887776664
No 81
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=21.32 E-value=2.4e+02 Score=24.76 Aligned_cols=89 Identities=9% Similarity=0.026 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCC----CcchHHHhHHH------HHHH-HHHHHHHHHHHHh-
Q 045703 72 GNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKN----GSCLEKATSLA------KLHN-EALSKQLFDLQKQ- 139 (247)
Q Consensus 72 ~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~----~~~~~~~~~~~------~~~N-~~L~~~l~~l~~~- 139 (247)
+.+...++++.+.|..-=+++|+.|+...-.........+ .+..+.+.... ...- +.-.++++.|.+.
T Consensus 189 ~~~~~f~~~~~~~Gi~vPIi~GI~pi~s~~~~~~~~~~~Gv~vP~~l~~~l~~~~d~~~~~~~~Gi~~a~e~i~~L~~~g 268 (296)
T PRK09432 189 ESYLRFRDRCVSAGIDVEIVPGILPVSNFKQLKKFADMTNVRIPAWMAKMFDGLDDDAETRKLVGASIAMDMVKILSREG 268 (296)
T ss_pred HHHHHHHHHHHHcCCCCCEEeeccccCCHHHHHHHHHccCCCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4456777788888987778888888765544443321111 11111111110 0000 0112344555543
Q ss_pred CCCCeEEEeeccHHHHHHHhC
Q 045703 140 LKGFKYSLFDLNSSLRKRINH 160 (247)
Q Consensus 140 ~~~~~i~~~D~~~~~~~~~~~ 160 (247)
.+|++++.++-.....+++++
T Consensus 269 v~GvH~yt~n~~~~~~~il~~ 289 (296)
T PRK09432 269 VKDFHFYTLNRAELTYAICHT 289 (296)
T ss_pred CCEEEEecCCChHHHHHHHHH
Confidence 688999999999999888864
No 82
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=20.78 E-value=3e+02 Score=24.93 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=27.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCC
Q 045703 63 ESNHVGMVIGNLTTVIKEIYKTGGRKFAFMNVPDLG 98 (247)
Q Consensus 63 ~~~~~~~~~~~~~~~v~~L~~~Gar~~~v~~lppl~ 98 (247)
..+++..++..+.+.++.|+++|+|.|=+ .=|.+.
T Consensus 161 ~~~~~~dlA~al~~Ei~~L~~aG~~~IQi-Dep~l~ 195 (368)
T PRK06520 161 LDDYFDDLAKTWRDAIKAFYDAGCRYLQL-DDTVWA 195 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cCcchh
Confidence 45778889999999999999999997544 444443
No 83
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=20.16 E-value=3.3e+02 Score=22.34 Aligned_cols=50 Identities=10% Similarity=0.222 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhCCcEEEEecCCCCCcccchhhcccCCCCcchHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeec
Q 045703 71 IGNLTTVIKEIYKTGGRKFAFMNVPDLGCLPVMRIMNTEKNGSCLEKATSLAKLHNEALSKQLFDLQKQLKGFKYSLFDL 150 (247)
Q Consensus 71 ~~~~~~~v~~L~~~Gar~~~v~~lppl~~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 150 (247)
-..+...++.|.+.|+++|.+..+ +.. ...++.+.+.+|+.+|+..-.
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~l--------l~~------------------------~~gl~~l~~~~p~v~i~~~~i 182 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSI--------VAA------------------------PEGIEAVEKAHPDVDIYTAAI 182 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE--------ecC------------------------HHHHHHHHHHCCCCEEEEEEE
Confidence 456778899999999999888654 100 233445566789999887765
Q ss_pred cH
Q 045703 151 NS 152 (247)
Q Consensus 151 ~~ 152 (247)
..
T Consensus 183 d~ 184 (207)
T TIGR01091 183 DE 184 (207)
T ss_pred CC
Confidence 43
No 84
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=20.10 E-value=1.8e+02 Score=21.74 Aligned_cols=26 Identities=23% Similarity=0.139 Sum_probs=21.9
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHhC
Q 045703 115 LEKATSLAKLHNEALSKQLFDLQKQL 140 (247)
Q Consensus 115 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 140 (247)
.+..+.++..||+.|.+.+.++++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34567889999999999999999764
Done!