BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045707
(901 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255579007|ref|XP_002530355.1| conserved hypothetical protein [Ricinus communis]
gi|223530102|gb|EEF32016.1| conserved hypothetical protein [Ricinus communis]
Length = 573
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/571 (57%), Positives = 423/571 (74%), Gaps = 12/571 (2%)
Query: 334 KRRIASILGRVSSNFVENPKKSLKIAFLPTG-SFYFAQTPRL-----FSKSLPFSNENVS 387
K R SIL VSSNF++ S KI P G F F + R+ + SN ++
Sbjct: 6 KLRKQSILKWVSSNFID----SHKIPLWPIGYKFRFYGSERVEICDDLANPSVDSNRSIG 61
Query: 388 K-SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARF 446
K S K AQAA+LEYLH+TR++PFMDAE+MS NSPHF++KL+++ +N D+ + RF
Sbjct: 62 KISRTTVKGAQAALLEYLHVTRSIPFMDAENMSVNSPHFLKKLLQKIDNGTDIGWSVTRF 121
Query: 447 LRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKI 506
LRYHPINEFEPFFESLGLKP E P LP +LMFLSDD+LLLENY+VLCNYG+ R KIG+I
Sbjct: 122 LRYHPINEFEPFFESLGLKPYELIPLLPRDLMFLSDDDLLLENYYVLCNYGIPRYKIGRI 181
Query: 507 LKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKS 566
KEA E+F ++ G SKL AYE LGLSQ FI KV+ CSPYLLIGDVN +FV+V++IL+
Sbjct: 182 YKEAMEIFGYNYGALASKLEAYEQLGLSQYFICKVVACSPYLLIGDVNVDFVKVVKILRE 241
Query: 567 MEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIAL 626
IE WIEEHL+E ++NW +L L LFR G ++ QLG LI HPG+LFEGSG L
Sbjct: 242 GGIEFSWIEEHLMEN-SYNWRQILALLNLFRKAGYNEAQLGALISHHPGILFEGSGDKTL 300
Query: 627 TMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHF 686
++IG L K G + N++CS+FLQFP+++V KF+ NL +C L L +I+M ++EIGKI+ H
Sbjct: 301 SLIGFLFKLGCSMNQICSMFLQFPEMQVGKFVYNLKRCFLLLTDIEMDINEIGKIVCSHL 360
Query: 687 LLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKERSQLLRT 746
LL+GS TLK+TN+ILA LN+GKKRL + IQENP E+K+ +GSRV RLP+ E S+ L+T
Sbjct: 361 LLLGSFTLKRTNSILANLNIGKKRLHKLIQENPQEMKRWEMGSRVERLPSSWEESKTLKT 420
Query: 747 KFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMK 806
KFL+D+G V N N+M +ALK FRGRG E+QERFDC+V AGLDRKDV EMI+ SPQILN K
Sbjct: 421 KFLVDMGLVNNLNKMEQALKVFRGRGTEIQERFDCIVKAGLDRKDVLEMIKTSPQILNQK 480
Query: 807 KDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASST 866
K++++ KIDFLVN LGYP S+LV+FPSY NYT R+KLR MY WLK++G ID +LA ST
Sbjct: 481 KEILEKKIDFLVNGLGYPASYLVNFPSYLNYTIVRVKLRLSMYTWLKEQGTIDSKLALST 540
Query: 867 LIAYSNKTFMQQFVNRHPKGPEVWQTFKKQI 897
+IA + F++Q+V HP+GP VWQ K +I
Sbjct: 541 VIACAENLFVEQYVKHHPRGPVVWQDLKNKI 571
>gi|255579009|ref|XP_002530356.1| conserved hypothetical protein [Ricinus communis]
gi|223530103|gb|EEF32017.1| conserved hypothetical protein [Ricinus communis]
Length = 523
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/509 (61%), Positives = 404/509 (79%), Gaps = 1/509 (0%)
Query: 393 RKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLRYHPI 452
RK+AQAA+LEYLH TR+L DAEHMSK SP F+EKL+++ + + DV R +ARFLRYHPI
Sbjct: 15 RKQAQAALLEYLHSTRSLQVTDAEHMSKGSPSFLEKLLQKVDIKEDVGRSVARFLRYHPI 74
Query: 453 NEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEARE 512
NEFEPFFESLGL+P EY PFLP +LMFLSDDELLLEN H LCNYG+ RNKIG+I EA E
Sbjct: 75 NEFEPFFESLGLRPAEYRPFLPRDLMFLSDDELLLENLHTLCNYGIPRNKIGRIYIEAGE 134
Query: 513 VFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESC 572
VF +D GV +KL AYE +GL QSF++K++VCSPYLLIGDVN +F++ ++IL+ IE C
Sbjct: 135 VFGYDYGVLATKLRAYEEMGLDQSFMAKIVVCSPYLLIGDVNVDFIKSMEILRKGGIELC 194
Query: 573 WIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLL 632
WIE+HL E+ ++NWS + L LF +EQL +I QHPG++FEGSG L++IG L
Sbjct: 195 WIEKHLSEKCSYNWSKLHALLNLFSKACFREEQLCEIISQHPGIVFEGSGDRTLSLIGFL 254
Query: 633 LKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSC 692
+KFGS++N++CS+FLQFPQI+V KFLLN+ QC LFL EI+M++ EIGKI+R + L++GSC
Sbjct: 255 VKFGSSKNQICSMFLQFPQIKVGKFLLNMRQCFLFLTEIEMEILEIGKIIRSYPLMLGSC 314
Query: 693 TLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPA-EKERSQLLRTKFLLD 751
TLKK+N++L+ LNVGKKRLC I +NP E+K +GS+V LP+ E+ RS++L+ KFLLD
Sbjct: 315 TLKKSNSLLSCLNVGKKRLCNIILQNPQEMKNWVIGSKVNPLPSDERLRSRMLKNKFLLD 374
Query: 752 VGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIK 811
+G+VENS EM KALK FRGRGAELQERFD ++ AGLD+KDV EM+R +PQILN KK+V+K
Sbjct: 375 LGFVENSTEMEKALKVFRGRGAELQERFDSIMEAGLDKKDVHEMVRQAPQILNQKKEVVK 434
Query: 812 SKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYS 871
KIDF VN LG+P+S LV+FP++ NYT +KL+ MYNWLKD+G +D L+ STLI+ S
Sbjct: 435 MKIDFFVNDLGFPISSLVTFPAFLNYTIPTVKLKLAMYNWLKDQGKVDPMLSLSTLISTS 494
Query: 872 NKTFMQQFVNRHPKGPEVWQTFKKQIYSE 900
+K F++++V HPKG E WQ KK+ SE
Sbjct: 495 DKLFVKRYVELHPKGSEFWQDLKKKFISE 523
>gi|225441407|ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241837 [Vitis vinifera]
gi|147864060|emb|CAN83222.1| hypothetical protein VITISV_031366 [Vitis vinifera]
gi|297739852|emb|CBI30034.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/583 (57%), Positives = 422/583 (72%), Gaps = 17/583 (2%)
Query: 334 KRRIASILGRVSSNFVENPKKSLKIAFLPTGSFYFAQTPRLFSKSLPFSNENVSK----- 388
K R S+ VS NF EN KS K FL GSF Q PR + + +EN
Sbjct: 6 KLRTKSVFKWVSLNFSENLLKSSKAPFLGAGSFRIRQNPRFYGRKTSAESENFQSPVETS 65
Query: 389 ----------SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD 438
S R +AQAA+LEYLH TR+L FMDAE+MSKNSP F+EK++ + +N+ +
Sbjct: 66 TVDFENVGHISRTTRAQAQAALLEYLHCTRSLQFMDAENMSKNSPFFLEKILGKVKNEAE 125
Query: 439 VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGV 498
+ + I RFLRYHPINEFEPFFESLGL P E++ LP NLMFL DD++LLENY++LCNYG+
Sbjct: 126 IGKSITRFLRYHPINEFEPFFESLGLTPSEFTNLLPRNLMFLCDDQVLLENYYILCNYGI 185
Query: 499 ARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFV 558
ARNKIGKI KEA EVF++D G+ + KL AY LGLSQS + K I SPYLLIGD N +FV
Sbjct: 186 ARNKIGKIYKEAPEVFRYDSGILRLKLQAYLELGLSQSTMIKAIASSPYLLIGDANMDFV 245
Query: 559 EVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLF 618
+ ++ LKS+ IES WIE+HL E ++WS M+ L LF +G + EQLG LIRQHPG+L
Sbjct: 246 KAMEKLKSVGIESNWIEKHLSEGNYYDWSQMVGLLCLFSKMGFNGEQLGELIRQHPGILL 305
Query: 619 EGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEI 678
E SG++A +++GLLLKFG T NE+ FLQFP IE KF N C LFL EI+++V+EI
Sbjct: 306 ECSGNLAHSLVGLLLKFGFTTNEIYIFFLQFPPIEFGKFYRNFRHCYLFLIEIELEVEEI 365
Query: 679 GKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLP--A 736
G+I+R H +L+GSC LK+ N++LA LN+GKKRLC I++NP ELKK LGSRVG LP
Sbjct: 366 GRIVRSHTVLLGSCALKRVNSLLANLNIGKKRLCGIIKDNPQELKKWVLGSRVGPLPNLG 425
Query: 737 EKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMI 796
E RSQL +TKFL D+GYVEN+ E+ KA K FRG+G ELQERFD L+ AGLDRKDV EMI
Sbjct: 426 EDLRSQLQKTKFLSDLGYVENTKEIEKARKLFRGKGMELQERFDFLMKAGLDRKDVSEMI 485
Query: 797 RVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEG 856
+V+PQILN DVI+ KID+L++ LGYP+S LV+FPSY +YT ER++LR MYNWLKD+G
Sbjct: 486 KVAPQILNQSTDVIEMKIDYLIHALGYPISSLVTFPSYLSYTTERVELRMSMYNWLKDQG 545
Query: 857 WIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYS 899
+ LA ST+IA S+ F+ ++VNRHPKG E+W+ K++IYS
Sbjct: 546 VAEPNLALSTIIACSDNYFIDRYVNRHPKGAEIWEKLKQKIYS 588
>gi|224137886|ref|XP_002322676.1| predicted protein [Populus trichocarpa]
gi|222867306|gb|EEF04437.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/562 (56%), Positives = 411/562 (73%), Gaps = 4/562 (0%)
Query: 340 ILGRVSSNFVENPKKSLKIAFLPTGSFYFAQTPRLF-SKSLPFSNENVSKSPFVRKEAQA 398
I VSSNFV + K L F A+ PR + +K + + S SP R EAQA
Sbjct: 9 IFKWVSSNFVSSNKTPLSSM---VSLFNIAENPRFYITKRIVQAENGQSISPLSRTEAQA 65
Query: 399 AMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLRYHPINEFEPF 458
A+LEYLH TRN+ F DAE+MSKNSPHF+EKL+ + + + + I R+L +HPINEFEPF
Sbjct: 66 ALLEYLHFTRNIQFTDAENMSKNSPHFLEKLLAKVDIDASIGQSITRYLCFHPINEFEPF 125
Query: 459 FESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQFDV 518
FESLGLKP +Y+P LP +LMFL DD+LLLENYHVLCNYG+AR+KIGKI KEA EVF +D
Sbjct: 126 FESLGLKPHDYNPLLPRDLMFLCDDDLLLENYHVLCNYGIARSKIGKIYKEAAEVFGYDY 185
Query: 519 GVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCWIEEHL 578
GV KL AYE LGL QSF+ K++VCSPYLLIG+VN +FV+VL IL+ ++ IEEHL
Sbjct: 186 GVLVLKLKAYEELGLGQSFMMKLVVCSPYLLIGEVNADFVKVLGILRKEGVDISRIEEHL 245
Query: 579 LEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGST 638
E+ +++WS +L L LFR+ G ++EQLGGLI +H G+ FE S +IG LLKFGST
Sbjct: 246 SEKSSYDWSKLLALLNLFRHAGYNEEQLGGLISRHLGIFFEDSVDRIYLLIGFLLKFGST 305
Query: 639 RNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTN 698
N++CS+FLQFPQ+E +F NL C LFL EI+M+ EI I H L++GSC LKK N
Sbjct: 306 MNQICSMFLQFPQMEFEEFFSNLRHCFLFLKEIQMEAHEIRNIFHSHPLMLGSCRLKKPN 365
Query: 699 TILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKERSQLLRTKFLLDVGYVENS 758
T+ L+ KR+CE IQE+P LKK +GS+V RL +S++ +TKFLLD+G V++S
Sbjct: 366 TLRLALHAADKRMCEVIQESPQVLKKWVMGSKVERLQNLILKSRMQKTKFLLDLGIVDDS 425
Query: 759 NEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLV 818
NE+ KALK FRG GA++QERFDC+V AGL RKDVCEMI+ SPQILN KDV++ KIDFLV
Sbjct: 426 NEIGKALKVFRGSGAKIQERFDCIVEAGLSRKDVCEMIKASPQILNQTKDVLEMKIDFLV 485
Query: 819 NYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQ 878
N +GYP+S+LV+FPSY NYT ER++LR MYNWLKD+G L+ ST+I+ S+K F+ +
Sbjct: 486 NKVGYPVSYLVTFPSYLNYTMERVELRLAMYNWLKDQGKSVPMLSLSTVISLSDKKFINE 545
Query: 879 FVNRHPKGPEVWQTFKKQIYSE 900
+VN HP+GPE+WQ KK+IY+E
Sbjct: 546 YVNSHPRGPEIWQNLKKEIYAE 567
>gi|224137882|ref|XP_002322675.1| predicted protein [Populus trichocarpa]
gi|222867305|gb|EEF04436.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 321/577 (55%), Positives = 414/577 (71%), Gaps = 21/577 (3%)
Query: 340 ILGRVSSNFVENPKKSLKIAFLPTGSF-YFAQTPRLFSKSLPFSNENVSK---------- 388
IL RVS NFV + + GS Y + P + EN+ +
Sbjct: 9 ILKRVSPNFVGRCRNPI----WQVGSLCYIVENPTFYGTKTTLQTENLDRNLIGNDQSIS 64
Query: 389 --SPFVRKEAQA--AMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIA 444
S R+EAQA A+LEYLH TR+ F+DAEHMSK SP FV+ L+++ D++R I
Sbjct: 65 KISDAARREAQASTALLEYLHSTRSFQFLDAEHMSKYSPVFVKNLLKKVNIDADIRRSIT 124
Query: 445 RFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIG 504
R+LRYHPINEFE FFES+GLKP EYS LP +LM+LSDD+LLLENYHV+CNYG+ARNK+G
Sbjct: 125 RYLRYHPINEFEIFFESMGLKPQEYSSLLPRDLMYLSDDDLLLENYHVMCNYGIARNKMG 184
Query: 505 KILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQIL 564
KI KEA EVF++D GV KL AYE LGLS SFI+KV+V SP LLIGD N +F+++L++L
Sbjct: 185 KIYKEATEVFRYDYGVLALKLKAYEKLGLSSSFIAKVVVRSPDLLIGDANIDFIKILELL 244
Query: 565 KSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSI 624
+ +E IE+ L ++ T+NWS +L L LF G +DEQL LI Q P +L E S
Sbjct: 245 RKGGLEYRRIEKLLSDKSTYNWSQLLSLLNLFGKAGYNDEQLSELISQKPWILREDSVDR 304
Query: 625 ALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRC 684
AL +IG LLKFGST N++CS+FLQFP+++V KF NL C LFL EI M+ EIGK+ R
Sbjct: 305 ALLLIGFLLKFGSTMNQICSLFLQFPKVQVEKFASNLRHCFLFLNEINMEAYEIGKLFRS 364
Query: 685 HFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLP--AEKERSQ 742
H + +GS TLKKTN++L+ LN GKKR+CE IQENP +KK GS++ LP E+ RSQ
Sbjct: 365 HPIFIGSFTLKKTNSLLSRLNAGKKRICEVIQENPEIMKKWVKGSKIEWLPDSGEELRSQ 424
Query: 743 LLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQI 802
+L+TKF LD+G+VENS+EM +ALK FRGRGAELQERFDCLV AGLDRKDVCEMI+VSPQI
Sbjct: 425 MLKTKFFLDLGFVENSDEMKRALKVFRGRGAELQERFDCLVIAGLDRKDVCEMIKVSPQI 484
Query: 803 LNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRL 862
LN K++VI+ KIDFL+N LG+P+S LV FPSY +YT +R KLR MYNWLK++G ++ L
Sbjct: 485 LNQKREVIEMKIDFLINDLGFPVSSLVRFPSYLSYTMQRAKLRLTMYNWLKEQGKVNPML 544
Query: 863 ASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYS 899
+ ST++ ++ F+ Q+V+RHP+GPE+W+ KK+I S
Sbjct: 545 SFSTIVGCTDNVFLSQYVDRHPRGPEIWEDLKKEICS 581
>gi|224137890|ref|XP_002322677.1| predicted protein [Populus trichocarpa]
gi|222867307|gb|EEF04438.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 312/562 (55%), Positives = 407/562 (72%), Gaps = 4/562 (0%)
Query: 340 ILGRVSSNFVENPKKSLKIAFLPTGSFYFAQTPRLFSKSLPFSNEN-VSKSPFVRKEAQA 398
I VSSNFV + K L F A++P + EN S +P R AQ
Sbjct: 9 IFNWVSSNFVGSNKTPLSSM---MSLFNIAESPMFYRTKRIVQAENGQSINPVSRIAAQT 65
Query: 399 AMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLRYHPINEFEPF 458
A+LEYL++TRN+ F DA++MSKNSPHF+EKL+ + + D+ I RFL +HPINEFEPF
Sbjct: 66 ALLEYLYVTRNIQFTDADNMSKNSPHFLEKLLAKVDIDADIGHSITRFLCFHPINEFEPF 125
Query: 459 FESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQFDV 518
FESLGLKP +Y+P LP +LMFL DD+LLLENYHVLCNYG+AR+KIGKI KEA EVF +D
Sbjct: 126 FESLGLKPHDYNPLLPRDLMFLCDDDLLLENYHVLCNYGIARSKIGKIYKEATEVFGYDY 185
Query: 519 GVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCWIEEHL 578
GV KL AYE LGL QSF+ K++VCSPYLLIG+VN +F++VL+IL+ ++ IEEHL
Sbjct: 186 GVLVLKLKAYEELGLVQSFMMKLVVCSPYLLIGEVNADFIKVLEILRKEGVDISRIEEHL 245
Query: 579 LEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGST 638
E+ +++WS +L L LFR+ G ++EQLGGLI QH + FE S +IG LLKFGST
Sbjct: 246 SEKSSYDWSKLLALLNLFRHAGYNEEQLGGLISQHLAIFFEDSVDRIYLLIGFLLKFGST 305
Query: 639 RNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTN 698
N++CS+FL FPQ+E +F NL C LFL EI+M+ EI I R H L++GSC LKK N
Sbjct: 306 MNQICSMFLWFPQMEFEEFFSNLRHCFLFLNEIQMEAHEIQSIFRSHPLMLGSCRLKKPN 365
Query: 699 TILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKERSQLLRTKFLLDVGYVENS 758
T+ L+ +KR+CE IQE+P LKK +GS+V RLP + +S+ L+TKFLLD+G V+NS
Sbjct: 366 TLRLALHAAEKRMCEVIQESPQVLKKWVMGSKVKRLPNLRLKSRKLKTKFLLDLGIVDNS 425
Query: 759 NEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLV 818
N++ KALK FRG G + QERFDC+V AG+ RKDVCEMI+ SPQIL KDV++ KIDFLV
Sbjct: 426 NKIGKALKVFRGSGEKFQERFDCIVEAGVSRKDVCEMIKASPQILGQSKDVLEMKIDFLV 485
Query: 819 NYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQ 878
N +GYP+S+LV+FPSY N+T +R++LR MYNWLKD+G L+ +LI+ S+K F+ +
Sbjct: 486 NKVGYPVSYLVTFPSYLNFTTQRVELRLAMYNWLKDQGKSVPMLSLRSLISLSDKKFINE 545
Query: 879 FVNRHPKGPEVWQTFKKQIYSE 900
+VN HP+GPE+WQ KK+IY+E
Sbjct: 546 YVNSHPRGPEIWQNLKKEIYAE 567
>gi|255579011|ref|XP_002530357.1| conserved hypothetical protein [Ricinus communis]
gi|223530104|gb|EEF32018.1| conserved hypothetical protein [Ricinus communis]
Length = 578
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 306/576 (53%), Positives = 416/576 (72%), Gaps = 17/576 (2%)
Query: 334 KRRIASILGRVSSNFVENPKKSLKIAFLPTGSFYF-AQTPRLFSKSLPFSNENVSK---- 388
K + SIL VSSN V+ KI FL + SF+ A P L+ K N+NV K
Sbjct: 6 KLQTLSILKWVSSNSVD----CYKIPFLSSRSFFDPANNPSLYRKKRVVDNDNVEKNLMH 61
Query: 389 --------SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQ 440
S RK+AQAA+LEYL TR+L F AEHMSKNSP F+EKL++R DV
Sbjct: 62 DGQIRSQFSKAARKQAQAALLEYLRFTRSLQFTLAEHMSKNSPSFLEKLLQRVYVDEDVG 121
Query: 441 RLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVAR 500
+ RFLRYHPINEFEPFFESLGL+P ++ FLP +L+FLSDDELLLEN+H LCNYG+
Sbjct: 122 WSVPRFLRYHPINEFEPFFESLGLRPYQFVAFLPHDLIFLSDDELLLENFHTLCNYGIPM 181
Query: 501 NKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEV 560
NKIG+I KEA E+F ++ G+ + KL YE LGL QS + K++VCSPYLL GDV+ +FV+
Sbjct: 182 NKIGRIFKEAGEIFGYNYGILEMKLRTYEELGLDQSLMGKIVVCSPYLLTGDVDIDFVKS 241
Query: 561 LQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEG 620
++I++ IE WIE+HL E+ ++NWS + L LF G ++EQL +I QHPG++FEG
Sbjct: 242 MEIVRKGGIEFRWIEKHLSEKCSYNWSQLHALLNLFSKTGYNEEQLCAIISQHPGIIFEG 301
Query: 621 SGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGK 680
SG++ L++IG L+KFGS+ N++CS+F QFPQ+ V +FLLN+ QC LFL EIK+++ EIGK
Sbjct: 302 SGNMTLSLIGFLVKFGSSINQICSMFSQFPQMRVGRFLLNMKQCFLFLTEIKLEILEIGK 361
Query: 681 ILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKER 740
I+R H L++GSCTLKK++++++ LN GKKR+C I +NPLE+K +GS++ LP+E+ R
Sbjct: 362 IIRSHPLMLGSCTLKKSSSLISILNAGKKRICNIILQNPLEMKNWVIGSKINPLPSERLR 421
Query: 741 SQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSP 800
S++L+ KFLLD+G+V+NS EM KALK F+G GAEL ERFDC++ AGLD+KD CE+IR +P
Sbjct: 422 SRILKIKFLLDLGFVKNSIEMEKALKVFKGSGAELHERFDCIMQAGLDKKDACEIIRQAP 481
Query: 801 QILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDG 860
ILN KK+VIK KIDFLVN LGYP+S L++FP+ Y +KL+++M NWLKD+G +
Sbjct: 482 PILNQKKEVIKMKIDFLVNDLGYPISSLLTFPTILTYAIPTVKLKWVMSNWLKDQGIVVP 541
Query: 861 RLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQ 896
+ +L S+K F++++V HPKG E WQ K++
Sbjct: 542 MCSLRSLFKNSDKAFIKRYVKLHPKGFEFWQNLKEK 577
>gi|449457339|ref|XP_004146406.1| PREDICTED: uncharacterized protein LOC101221161 [Cucumis sativus]
Length = 594
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/509 (55%), Positives = 374/509 (73%), Gaps = 2/509 (0%)
Query: 394 KEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLRYHPIN 453
KEAQAAMLEYLH TR + F DA+ MSKNSP F++KL+ R E++ D+ R I RFLRYHPIN
Sbjct: 79 KEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRFLRYHPIN 138
Query: 454 EFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREV 513
EFEPFFES+GL+P EY+ FLP NLMFLSDD+LLLEN+HVL NYGV RNK GKI KE ++
Sbjct: 139 EFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQI 198
Query: 514 FQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCW 573
F+++ GV SKL AYE LGLSQ+ ++ ++VC+PYLLIG VN FV+VL+ L+++ E W
Sbjct: 199 FRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLENIGFELSW 258
Query: 574 IEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLL 633
+EE L + ++NW +L L F +GC E+L LI Q P LL E SGS +LT+IGLLL
Sbjct: 259 VEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLIGLLL 318
Query: 634 KFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCT 693
K G + ++CS+FLQFPQI V +F+ N+ QC L EI M V EIG + R LL+G T
Sbjct: 319 KMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLLGLYT 378
Query: 694 LKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKE--RSQLLRTKFLLD 751
LK+ ++L LNVGK+RLC+++ ENP ELK L +G RV RLP E RS+ +T+FLL
Sbjct: 379 LKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQKTQFLLK 438
Query: 752 VGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIK 811
+G ENS EM +ALK FRG+ A LQERFDC+V AG+D+KDV +MI+V P+I+N++KD I+
Sbjct: 439 LGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIINLRKDTIE 498
Query: 812 SKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYS 871
KIDFLVN L YP+S L+SFP Y ++ + + LRF MYNWLK++G D LA T+++ S
Sbjct: 499 EKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLALKTIVSCS 558
Query: 872 NKTFMQQFVNRHPKGPEVWQTFKKQIYSE 900
F++ VNRHP+G EVW+ K++IYS+
Sbjct: 559 EYEFLRHHVNRHPRGMEVWENLKREIYSD 587
>gi|449531338|ref|XP_004172643.1| PREDICTED: uncharacterized LOC101221161 [Cucumis sativus]
Length = 594
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/509 (55%), Positives = 373/509 (73%), Gaps = 2/509 (0%)
Query: 394 KEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLRYHPIN 453
KEAQAAMLEYLH TR + F DA+ MSKNSP F++KL+ R E++ D+ R I RFLRYHPIN
Sbjct: 79 KEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRFLRYHPIN 138
Query: 454 EFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREV 513
EFEPFFES+GL+P EY+ FLP NLMFLSDD+LLLEN+HVL NYGV RNK GKI KE ++
Sbjct: 139 EFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQI 198
Query: 514 FQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCW 573
F+++ GV SKL AYE LGLSQ+ ++ ++VC+PYLLIG VN FV+VL+ L+++ E W
Sbjct: 199 FRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLENIGFELSW 258
Query: 574 IEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLL 633
+EE L + ++NW +L L F +GC E+L LI Q P LL E SGS +LT+IGLLL
Sbjct: 259 VEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLIGLLL 318
Query: 634 KFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCT 693
K G + ++CS+FLQFPQI V +F+ N+ QC L EI M V EIG + R LL+G T
Sbjct: 319 KMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLLGLYT 378
Query: 694 LKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKE--RSQLLRTKFLLD 751
LK+ ++L LNVGK+RLC+++ ENP ELK L +G RV RLP E RS+ +T+FLL
Sbjct: 379 LKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQKTQFLLK 438
Query: 752 VGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIK 811
+G ENS EM +ALK FRG+ A LQERFDC+V AG+D KDV +MI+V P+I+N++KD I+
Sbjct: 439 LGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDEKDVYKMIKVCPRIINLRKDTIE 498
Query: 812 SKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYS 871
KIDFLVN L YP+S L+SFP Y ++ + + LRF MYNWLK++G D LA T+++ S
Sbjct: 499 EKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLALKTIVSCS 558
Query: 872 NKTFMQQFVNRHPKGPEVWQTFKKQIYSE 900
F++ VNRHP+G EVW+ K++IYS+
Sbjct: 559 EYEFLRHHVNRHPRGMEVWENLKREIYSD 587
>gi|357509907|ref|XP_003625242.1| hypothetical protein MTR_7g093000 [Medicago truncatula]
gi|355500257|gb|AES81460.1| hypothetical protein MTR_7g093000 [Medicago truncatula]
Length = 571
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/527 (51%), Positives = 371/527 (70%), Gaps = 15/527 (2%)
Query: 389 SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERF---ENQLDVQRLIAR 445
S KEAQAA+LEYLH TR+L F+DA++M KNSP F++ L+ + EN ++ +RLI+R
Sbjct: 45 SKLTIKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQNLVHKTLKNENSINTKRLISR 104
Query: 446 FLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGK 505
LRY+PINEFEPFFESLGLKP EY LP +L+FL+DD LL+ NYH LCNYGV R+K+GK
Sbjct: 105 HLRYNPINEFEPFFESLGLKPSEYESLLPRDLIFLNDDPLLMANYHTLCNYGVPRSKMGK 164
Query: 506 ILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILK 565
I K+A +VF+F+ GV SK+ AYE LG+S S + + SP +L+GDVN EFV+V+++LK
Sbjct: 165 IFKQAPQVFKFENGVLVSKIKAYEDLGISASILVNAVAVSPGILVGDVNVEFVKVVEMLK 224
Query: 566 SM-------EIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLF 618
++ + +S WI+ H L++ + NW +ML L L + G S++QL +I + P ++F
Sbjct: 225 NIVAKGGDGDFDSGWIQWHYLDEVSCNWGLMLELLCLLSDTGFSEKQLAEIIHRSPCIVF 284
Query: 619 EGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEI 678
E SG L+MIG L+KFG + N++ +FL+FPQI + KF NL CL L EI+M+ EI
Sbjct: 285 EESGGKTLSMIGFLVKFGLSVNQIALLFLEFPQILMVKFFANLRVCLQLLTEIEMEAKEI 344
Query: 679 GKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSR----VGRL 734
GKI + H +L GS TLK T ++L LNVGK+RLC +Q+NP E+K LG R VG
Sbjct: 345 GKIFQSHTILAGSNTLKTTKSLLGCLNVGKRRLCSILQDNPHEMKNWVLGIRVKPMVGLR 404
Query: 735 PAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCE 794
E+E+S++ +T+FLL +GYVEN+ EM A K FRG+GAELQERFD +VNAGL R +V
Sbjct: 405 DLEEEKSRVGKTEFLLRLGYVENTKEMDSAFKAFRGKGAELQERFDFIVNAGLTRDEVRR 464
Query: 795 MIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKD 854
MIRVSPQILN D +K KI++LV G+ +S LV+FPSY +Y R+KLR MYNWL D
Sbjct: 465 MIRVSPQILNQNTDRVKMKIEYLVKK-GFSVSDLVNFPSYLSYKSPRVKLRLSMYNWLVD 523
Query: 855 EGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYSEE 901
G + LA ST+IA ++ F+Q +V RHP G +VW+ +K+I+SE+
Sbjct: 524 HGAVTPGLALSTIIACTDNLFLQSYVKRHPSGLQVWEELQKEIHSED 570
>gi|359484084|ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
Length = 564
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/512 (50%), Positives = 349/512 (68%), Gaps = 3/512 (0%)
Query: 389 SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLR 448
S VR EAQ + +YLH TR+ DAEHMSKNSPHF++KL+ + EN+ DV R +++FLR
Sbjct: 52 SRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFLQKLLSKVENEQDVARSLSKFLR 111
Query: 449 YHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILK 508
Y+PINEFEPFFESLGL P E S LP NLMFLSDD +++ENYHVLC+YG+AR+ IG++ K
Sbjct: 112 YNPINEFEPFFESLGLAPSEISALLPRNLMFLSDDCVMIENYHVLCDYGIARSSIGRMYK 171
Query: 509 EAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSME 568
E + +F++++G+ SK+ AYE LGLS+S + K++ C P+LL+G VN++FV VL+ +K +
Sbjct: 172 EVQAIFRYELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVLKRVKGLG 231
Query: 569 IESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTM 628
ES WI +L + ++NW M + +G S+EQ+ L + +P LLFEGSG +
Sbjct: 232 FESDWIGGYLSGKSSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGSGKKFYVL 291
Query: 629 IGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLL 688
IG LLK G + S+FLQ PQI +K + NL Q + FLFEI MKV++I I+ H L
Sbjct: 292 IGRLLKLGFKMKGVLSLFLQNPQILSKKCVKNLWQAVGFLFEIGMKVEDIVSIVSSHVQL 351
Query: 689 VGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRL---PAEKERSQLLR 745
+ SC+LK T+L L VG++ LC+ I+E+P EL LA S++ + + L +
Sbjct: 352 LCSCSLKGPRTVLRSLKVGREGLCQIIKEDPSELLSLASKSKINSMEHVTCQSPSKHLEK 411
Query: 746 TKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNM 805
T FLL +GYVENS+EM KALK FRGRG +LQERFDCLV AGLD V MI+ +P +LN
Sbjct: 412 TTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQAPSVLNQ 471
Query: 806 KKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASS 865
K VI+ KID L N LGYPL +V+FPSY Y ERI LRF MY WL+D+G L+ S
Sbjct: 472 TKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKGAAKSNLSLS 531
Query: 866 TLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQI 897
T++A S+ F++ FV+ HP+GP W+ +K +
Sbjct: 532 TILACSDARFVKYFVDVHPEGPAQWERLRKSL 563
>gi|15240177|ref|NP_196299.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|9759310|dbj|BAB09816.1| unnamed protein product [Arabidopsis thaliana]
gi|332003686|gb|AED91069.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 1141
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/575 (46%), Positives = 371/575 (64%), Gaps = 30/575 (5%)
Query: 340 ILGRVSSNFVENPKKSLKIAFLPTGSFYFAQTPRLFSKSLPFSNENVSKSPF-------V 392
+L VS F E P K ++ PR F+ + VS + +
Sbjct: 574 LLNWVSQAFAETPLKP-----------QLSRNPRFFATQRALVDAEVSGEKWGLRTRNEI 622
Query: 393 RKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFEN-------QLDVQRLIAR 445
RK AQ AM +Y + TR L F+ AE MSKN+P F + L+++ D+ + I R
Sbjct: 623 RKVAQVAMFDYFYQTRGLQFLVAESMSKNAPVFNDNLLKKLNGCDVDVDDDDDIVKAITR 682
Query: 446 FLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGK 505
FL +HP+NEFEPF ESLGLKP E+S +P + MFL++D LLENYHV NYG+ R K+GK
Sbjct: 683 FLWFHPVNEFEPFLESLGLKPSEFSHLIPCDKMFLNEDAFLLENYHVFWNYGIGREKMGK 742
Query: 506 ILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILK 565
I KEAREVF ++ GV SK+ +YE LG S+ F+SK+IVCSP +LIGD+N +V+++LK
Sbjct: 743 IFKEAREVFGYETGVLASKIKSYEDLGFSKLFLSKLIVCSPSILIGDMNVGLAKVMEMLK 802
Query: 566 SMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIA 625
++ W+ E+L E+ +++WS M R L R+L + +L LIR+ P L+FE SG
Sbjct: 803 AIGFGVDWVTENLSEEVSYDWSSMHRCLSFLRDLYVDENELCELIRKMPRLIFEDSGEWT 862
Query: 626 LTMIGLLLKFGSTRNELCSIFLQFPQIE-VRKFLLNLNQCLLFLFEIKMKVDEIGKILRC 684
L + G K GS+R+EL S+F +FPQ + + KF+LNL C LFL +I+M DEIGKI R
Sbjct: 863 LILAGFEAKLGSSRSELSSLFQKFPQCQSLGKFVLNLRHCFLFLKDIEMDDDEIGKIFRL 922
Query: 685 HFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAE----KER 740
H L +G LK+T+T+L L GK RLC+ IQENP E+KK +G RV LPA +
Sbjct: 923 HSLWIGVSRLKQTSTLLINLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATGYKVNTK 982
Query: 741 SQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSP 800
S+ ++T+FLLD+GY ENS EM +ALK+FRG+G+EL+ERF+ LV+ GL KDV +M++ P
Sbjct: 983 SKTMKTQFLLDLGYKENSEEMERALKNFRGKGSELRERFNVLVSFGLTEKDVKDMVKACP 1042
Query: 801 QILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDG 860
IL D+++SK+++LV LGYPLS LV+FP+ YT +R+KLRF M++WL+D G D
Sbjct: 1043 SILTQACDILESKVNYLVKELGYPLSTLVTFPTCLKYTLQRMKLRFSMFSWLQDRGKADP 1102
Query: 861 RLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKK 895
+L ST++ S+K F +FVNRHP GP+ + KK
Sbjct: 1103 KLQVSTILVCSDKFFATRFVNRHPDGPKHLEDLKK 1137
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/583 (44%), Positives = 379/583 (65%), Gaps = 25/583 (4%)
Query: 336 RIASILGRVSSNFVENPKKSLKIAFLPTGSFY-FAQTPRLFSKSLPFSNENVSK------ 388
R S+L VS +E LK + TG AQTPR F+ NE S+
Sbjct: 9 RFTSVLKWVSQLSLET---QLKPSISGTGFLLRCAQTPRSFATVT--GNEVCSEKSKVKR 63
Query: 389 -------SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFE--NQLDV 439
+P VRK A+ AML+Y + TR L +M AE MSKNSP F++ L+++ + D+
Sbjct: 64 TRNGFKITPNVRKLAEEAMLDYFYSTRGLQYMVAESMSKNSPIFIDNLLKKVDCVTASDI 123
Query: 440 QRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVA 499
+ I R+LR+HP+NEFEPF ES GL P EY+ +P + +FL ++ LLEN+HVLC GV
Sbjct: 124 NQSITRYLRFHPVNEFEPFLESSGLNPSEYNHLVPCDKVFLDEEGFLLENHHVLCYSGVD 183
Query: 500 RNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVE 559
+IGKI KEAREVF ++ GV SK+ AYE LG S+ F+SK+IVCSP +L+G N E V+
Sbjct: 184 PKRIGKIFKEAREVFSYETGVLASKIKAYEDLGFSRLFLSKLIVCSPRVLMGHTNIELVQ 243
Query: 560 VLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFE 619
V++ L+S+ E W+ E+ L E +WS + R L L R + +E+L GLIR P LLFE
Sbjct: 244 VVKTLQSLGFEFEWVMEN-LSDEGPDWSSVHRVLSLLREICFDEEKLYGLIRNCPSLLFE 302
Query: 620 GSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIG 679
SG ++G K G++R+ELCS+F +FP I+V K + NL QC LFL EI+M+ DEI
Sbjct: 303 NSGKWTGILVGFETKLGASRSELCSLFQKFPLIQVEKCVSNLRQCFLFLKEIEMEDDEIH 362
Query: 680 KILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKE 739
K+ R H +GSC LKKT+++L +L GK R+C+ IQENP E+KK +GS++ LPA
Sbjct: 363 KVFRSHSWWLGSCKLKKTSSLLVFLKAGKTRVCQVIQENPEEMKKWTMGSKIQPLPATNV 422
Query: 740 --RSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIR 797
S+ ++T+FLLD+GY ENS EM A+K+FRG+G+EL+ERF+ LV+ G +KDV +M++
Sbjct: 423 DIESKSMKTQFLLDLGYKENSEEMETAMKNFRGKGSELRERFNVLVSLGFTKKDVKDMVK 482
Query: 798 VSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGW 857
P +L+ D+++SK+++L+ LGYPLS LV FPS +T +R+KLRF M++WL+ G
Sbjct: 483 ACPTMLSQTCDILESKVNYLIKELGYPLSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGK 542
Query: 858 IDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYSE 900
+D ++ ST++A S+K F+ F+ R+P+ + + Q ++E
Sbjct: 543 VDRKIKVSTMLACSDKIFVMSFM-RNPRFKSLLLNWVSQAFAE 584
>gi|224137878|ref|XP_002322674.1| predicted protein [Populus trichocarpa]
gi|222867304|gb|EEF04435.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/326 (75%), Positives = 281/326 (86%), Gaps = 7/326 (2%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED+KKRKM++ + +G+ +S++QD+LRSLLDPL+KSQLVDLLSRLGSQYPSIAE
Sbjct: 1 MEDMKKRKMDEGSNNGSGE-----TSTTQDYLRSLLDPLNKSQLVDLLSRLGSQYPSIAE 55
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIK +ASADPVHRKLFVRGLAWNTTSETLCAAF++HGEIEEGAVIYDKATGKSRGYGFIT
Sbjct: 56 EIKGLASADPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKATGKSRGYGFIT 115
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
YKHMES QSAL APS+LID R+AVCNLACEGL+G S PDLAQRKLY+GGLSPE+++E+L
Sbjct: 116 YKHMESAQSALGAPSRLIDSRMAVCNLACEGLTGASTTPDLAQRKLYVGGLSPEISSEML 175
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
LNFFGR+G+IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA+DDPHK GGRTIIVKLAD
Sbjct: 176 LNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPHKLFGGRTIIVKLAD 235
Query: 241 THKGKPPQTQLPAAVVPVPLPLGA-GYPQAGKAHA-NTPPVGYSYPQNVPPYPTSSYTSP 298
TH+ K QT LPA +VP+ +P+GA GY Q GKA A PVGY YPQ V PYP SSY +P
Sbjct: 236 THRSKTVQTHLPAPMVPLQVPMGAGGYAQPGKAPAGGGAPVGYPYPQTVAPYPASSYPNP 295
Query: 299 NTAPVPYPTQPPISYPPIPLKKDPIG 324
AP PYPTQ ISY +P KK+P+G
Sbjct: 296 PVAPAPYPTQTQISYAQVPSKKEPLG 321
>gi|297806695|ref|XP_002871231.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317068|gb|EFH47490.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1144
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/501 (49%), Positives = 353/501 (70%), Gaps = 4/501 (0%)
Query: 389 SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFE--NQLDVQRLIARF 446
+P +RK A+ AML+Y + TR L +M AE MSKNSP F++ L+++ + D+ + I R+
Sbjct: 71 TPTIRKLAEEAMLDYFYSTRGLQYMVAESMSKNSPMFIDNLLKKVDCVTASDINQSITRY 130
Query: 447 LRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKI 506
LR+HP+NEFEPF ES GLKP EYS +P + +FL ++ LLEN+HVLC GV KIGKI
Sbjct: 131 LRFHPVNEFEPFLESSGLKPTEYSHLVPCDKVFLEEEGFLLENHHVLCYSGVDPKKIGKI 190
Query: 507 LKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKS 566
KEAREVF ++ GV SK+ AYE LG S+ F+SK+IVCSP +LIG+ N E +VL+ LKS
Sbjct: 191 FKEAREVFGYETGVLASKIKAYEDLGFSRYFLSKLIVCSPRILIGNTNVELAKVLKTLKS 250
Query: 567 MEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIAL 626
M E W+ E+L ++ + +WS + R LRLFR + +E+L GLIR++P L+FE SG +
Sbjct: 251 MGFEFDWVMENLSDEGSCDWSSVHRVLRLFREICFDEEELCGLIRKYPRLVFENSGKWTV 310
Query: 627 TMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHF 686
++G K GS+R ELCS+F +FP I+V K + NL QC LFL EI+M+ DEI K+ R H
Sbjct: 311 ILVGFETKLGSSRRELCSLFQKFPLIQVEKCVSNLRQCFLFLKEIEMEDDEIHKVFRSHS 370
Query: 687 LLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKE--RSQLL 744
+GSC LKKT+++L +L GK R+C+ IQE+P E+KK +GS++ LPA S+L+
Sbjct: 371 WWLGSCRLKKTSSLLVFLKAGKTRVCQVIQESPEEMKKWTMGSKIQPLPATNVDIDSKLM 430
Query: 745 RTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILN 804
+T+FLLD+GY ENS EM ALK+FRG+ +EL+ERF+ LV+ G KDV +M++ P +L+
Sbjct: 431 KTQFLLDLGYKENSEEMESALKNFRGKRSELRERFNVLVSLGFTEKDVKDMVKACPTMLS 490
Query: 805 MKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLAS 864
D+++SK+++L+N LGYP S LV FPS +T +R+KLRF M++WL+ G +D ++
Sbjct: 491 QTCDILESKVNYLINELGYPHSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGKVDRKIKV 550
Query: 865 STLIAYSNKTFMQQFVNRHPK 885
ST++A S+K F+ R+P+
Sbjct: 551 STMLACSDKIFVIMSFMRNPR 571
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/577 (45%), Positives = 370/577 (64%), Gaps = 27/577 (4%)
Query: 336 RIASILGRVSSNFVENPKKSLKIAFLPTGSFYFAQTPRLFSKSLPFSNENVSKSPF---- 391
R S+L VS F E P F P S PR F+ + VS +
Sbjct: 571 RFKSLLNWVSQAFTETP-------FKPQVS---GGNPRSFATQRALVDAEVSGEKWGLRT 620
Query: 392 ---VRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFEN-----QLDVQRLI 443
+RK AQ AM +Y + TR L F+ AE MS+N+P F + L+++ DV + I
Sbjct: 621 RNEIRKVAQVAMFDYFYQTRGLQFLVAESMSRNAPVFNDNLLKKLNGCDVDDDDDVVKAI 680
Query: 444 ARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKI 503
RFL +HP+NEFEPF ESLGLKP E+S +P + MFL++D LLENYHV NYG+ R K+
Sbjct: 681 TRFLWFHPVNEFEPFLESLGLKPSEFSHLIPCDKMFLNEDAFLLENYHVFWNYGIGREKM 740
Query: 504 GKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQI 563
GKI KEAREVF ++ GV SK+ AYE LG S+ F+SK+IVCSP +LIG+ N +++++
Sbjct: 741 GKIFKEAREVFGYETGVLASKIKAYEDLGFSKLFLSKLIVCSPSILIGNTNVGLAKIMEM 800
Query: 564 LKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGS 623
LK++ W+ E+L E+ +++WS M R L R++ + +L LIR+ P L+FE SG
Sbjct: 801 LKAISFGVDWVTENLSEEVSYDWSSMHRCLSFLRDMCVDENELRELIRKRPKLIFEDSGE 860
Query: 624 IALTMIGLLLKFGSTRNELCSIFLQFPQIE-VRKFLLNLNQCLLFLFEIKMKVDEIGKIL 682
+ + G K GS+R+EL S+F +FPQ + + KF+ NL C LFL +I M+ DEIGKI
Sbjct: 861 WTMILAGFEAKLGSSRSELSSLFQKFPQSQSIGKFVSNLRHCFLFLKDIDMEADEIGKIF 920
Query: 683 RCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAE----K 738
R H +G LK+T+T+L L GK RLC+ IQENP E+KK +G RV LPA
Sbjct: 921 RLHSSWLGVTRLKQTSTLLINLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATGCKVD 980
Query: 739 ERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRV 798
+S+ ++T+FLLD+GY ENS EM +ALK+FRG+G+EL+ERF+ LV+ G KDV +M++
Sbjct: 981 TKSKTMKTQFLLDLGYKENSEEMERALKNFRGKGSELRERFNVLVSFGFTEKDVKDMVKA 1040
Query: 799 SPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWI 858
P IL+ D+++SK+++L+N LG+PL LV+FP+ YT +R+KLRF M++WL+D G
Sbjct: 1041 CPSILSQACDILESKVNYLINELGHPLLTLVTFPTCLKYTLQRMKLRFAMFSWLQDRGKA 1100
Query: 859 DGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKK 895
D +LA ST++ S+K F +FVNRHP G + + KK
Sbjct: 1101 DPKLAVSTILVCSDKFFATRFVNRHPDGAKHLEDLKK 1137
>gi|225441409|ref|XP_002278602.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 355
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/333 (74%), Positives = 274/333 (82%), Gaps = 19/333 (5%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED+KKRK+E+ + NGQ SSS + L+ LLDPLSKSQLVDLLS+LGSQYPSIAE
Sbjct: 14 MEDLKKRKLEEAS---NGQ-----ISSSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAE 65
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR+HGEIEEGAVI DK TGKSRGYGFIT
Sbjct: 66 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFIT 125
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
YKHMESTQSAL+APSKLIDGR+AVCNLACEGLSG S PD AQRKLYIGGL+P+VT+EVL
Sbjct: 126 YKHMESTQSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVL 185
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
L+FFGRHGEIEEGSVAYDK+TNESRGFGFVTYKTVEAAKKA+DDP K LGGR+IIVKLAD
Sbjct: 186 LSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLAD 245
Query: 241 THKGKPPQTQLPAAVVPVPLPLGAGYP-QAGKAHANTPPVGYSYPQNVPPYPTSSYTSP- 298
+HKGK Q QL AVVP+ LPL AGYP Q GK A+ PV Y+YPQ YP +Y P
Sbjct: 246 SHKGKMIQAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYP--AYPGPP 303
Query: 299 -------NTAPVPYPTQPPISYPPIPLKKDPIG 324
+TAP PYP+QP + Y + KDP+G
Sbjct: 304 TGPAPYSSTAPAPYPSQPQMPYSSATVMKDPLG 336
>gi|297739851|emb|CBI30033.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/333 (74%), Positives = 274/333 (82%), Gaps = 19/333 (5%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED+KKRK+E+ + NGQ SSS + L+ LLDPLSKSQLVDLLS+LGSQYPSIAE
Sbjct: 1 MEDLKKRKLEEAS---NGQ-----ISSSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAE 52
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR+HGEIEEGAVI DK TGKSRGYGFIT
Sbjct: 53 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFIT 112
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
YKHMESTQSAL+APSKLIDGR+AVCNLACEGLSG S PD AQRKLYIGGL+P+VT+EVL
Sbjct: 113 YKHMESTQSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVL 172
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
L+FFGRHGEIEEGSVAYDK+TNESRGFGFVTYKTVEAAKKA+DDP K LGGR+IIVKLAD
Sbjct: 173 LSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLAD 232
Query: 241 THKGKPPQTQLPAAVVPVPLPLGAGYP-QAGKAHANTPPVGYSYPQNVPPYPTSSYTSP- 298
+HKGK Q QL AVVP+ LPL AGYP Q GK A+ PV Y+YPQ YP +Y P
Sbjct: 233 SHKGKMIQAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYP--AYPGPP 290
Query: 299 -------NTAPVPYPTQPPISYPPIPLKKDPIG 324
+TAP PYP+QP + Y + KDP+G
Sbjct: 291 TGPAPYSSTAPAPYPSQPQMPYSSATVMKDPLG 323
>gi|242082167|ref|XP_002445852.1| hypothetical protein SORBIDRAFT_07g026910 [Sorghum bicolor]
gi|241942202|gb|EES15347.1| hypothetical protein SORBIDRAFT_07g026910 [Sorghum bicolor]
Length = 641
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/531 (46%), Positives = 341/531 (64%), Gaps = 26/531 (4%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIER---------------FENQLDVQ 440
AQ +EYLH+TR L F+DAEH+SK+SP FV KL+ + F +++ +
Sbjct: 104 AQRTFMEYLHVTRGLSFLDAEHISKHSPAFVSKLLNQVKDAIKDPVEGGEAVFRSKVKTR 163
Query: 441 RL--------IARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHV 492
+ + R RYHPINEFEPFFES+GLKP EY FLP +LMFLSDDE LLENY V
Sbjct: 164 EMRDERATTALQRLFRYHPINEFEPFFESMGLKPSEYESFLPQDLMFLSDDEALLENYRV 223
Query: 493 LCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGD 552
LCNYGV R KIG I ++A EVF F GV SKL A E LG S++ + K++ C P +L
Sbjct: 224 LCNYGVMRTKIGGIYRDAGEVFSFGDGVLASKLRAIEDLGFSKTTVIKLVTCCPAVLTRG 283
Query: 553 VNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQ 612
+ E +++++ L I+ WI + L ++++NW M+ + F LG E +G LIRQ
Sbjct: 284 PHAE-LKIIKWLDDTGIQRDWIGQFLSIKKSYNWRKMVEVPQFFTELGFDKEGIGKLIRQ 342
Query: 613 HPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIK 672
HP L +GSG + ++LK GS + +L +FL FP ++ R F N+ +LFL EI
Sbjct: 343 HPDFLLDGSGKALFRAVAIMLKAGSGKEDLFDLFLDFPDVQARSFARNIQSLILFLTEID 402
Query: 673 MKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVG 732
+ ++I K + + ++GS +KK N+IL YLNVGK+RL I E P EL K ALG +V
Sbjct: 403 VSEEDIKKFVVANASMLGSARVKKANSILTYLNVGKRRLWRIIMEEPHELMKYALGLKVN 462
Query: 733 RLP--AEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRK 790
RLP E+S + KFL ++G+ E S++M KALK FRG+G +LQ+RFD LV G + K
Sbjct: 463 RLPPYDRTEKSLKEKVKFLKNIGFEEGSDDMNKALKTFRGKGDQLQDRFDFLVKTGFEPK 522
Query: 791 DVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYN 850
DV +MI+V+PQ+LN K V++SKI FL+N YPLS LV +P+Y ++T ER K RFLMYN
Sbjct: 523 DVSKMIKVAPQVLNQKIHVLESKIAFLLNETSYPLSALVGYPAYLSFTIERTKARFLMYN 582
Query: 851 WLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYSEE 901
WL+++G + LA STL+A S K F++ V +H KGPEVW+ KK++ +++
Sbjct: 583 WLREKGLVPPNLALSTLLACSEKRFLKYLVLKHEKGPEVWEKLKKEVVADK 633
>gi|356570512|ref|XP_003553429.1| PREDICTED: uncharacterized protein LOC100807690 [Glycine max]
Length = 562
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/521 (48%), Positives = 356/521 (68%), Gaps = 16/521 (3%)
Query: 394 KEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDV-------QRLIARF 446
KEAQAA+LEYLH TR+L +DAE+M +NSP F+ L+ + ++Q +R I+R+
Sbjct: 43 KEAQAALLEYLHSTRSLNIVDAENMCRNSPSFLHDLLAKSQSQTLTRSTTTTTKRSISRY 102
Query: 447 LRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKI 506
LRYHPINEFEPFFES GL P EY+PFLP ++++L+DD LL+ENYH LCNYGV R K+G++
Sbjct: 103 LRYHPINEFEPFFESAGLTPPEYAPFLPRDMIYLNDDALLMENYHALCNYGVPRTKMGRL 162
Query: 507 LKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKS 566
K ++F++ GV SKL YE LG+++ ++ V+ SP +L+G V+ FV+V++ LK
Sbjct: 163 FKLTPQLFRYKPGVLISKLRDYEKLGVARRTLACVVASSPCILVGGVDVGFVKVVEKLKG 222
Query: 567 MEIESC-WIEEHLL----EQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGS 621
+ + WI E+LL +Q +W ++L L L + S+EQLG +HP ++FE S
Sbjct: 223 VVGKDVDWIGENLLDMLSDQGCCDWRIVLHVLCLLDRV-YSEEQLGDFFIRHPSVVFEDS 281
Query: 622 GSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKI 681
G L++I L KFG + +++ + L+FP+I V KFL NL QC LFL EI+M+ EIG+I
Sbjct: 282 GGSVLSLINFLFKFGLSLDQVSLMLLEFPKIRVTKFLSNLRQCFLFLTEIEMEALEIGEI 341
Query: 682 LRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAE--KE 739
L+ L++GS TLKKT T+L LN GKKRLC ++++PL +K ALG R+ +
Sbjct: 342 LQSQCLVLGSFTLKKTITLLTNLNAGKKRLCRVVRDDPLVMKSWALGRRIQPFVNSYLEY 401
Query: 740 RSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVS 799
S+ + KF+L +GYVENS +M + ++ FRG+GAEL+ER D +V AGLD + VC+MIR S
Sbjct: 402 ESKEQKKKFMLKLGYVENSKKMNETIRLFRGKGAELEERLDFIVKAGLDYEVVCKMIRDS 461
Query: 800 PQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWID 859
P+ILN D I KI+ LV+ LGY +S L SFPS+ +Y+ R+KLRFLMY+WLK+ G ++
Sbjct: 462 PRILNQTTDRINMKIENLVS-LGYSISDLASFPSFLSYSPRRVKLRFLMYDWLKEHGAVE 520
Query: 860 GRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYSE 900
LA ST+IA S+K F + +V RHP G +VWQ K QI S+
Sbjct: 521 AGLALSTIIACSDKAFEKLYVKRHPSGLQVWQDLKAQISSK 561
>gi|357141946|ref|XP_003572404.1| PREDICTED: uncharacterized protein LOC100822558 [Brachypodium
distachyon]
Length = 648
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/529 (46%), Positives = 343/529 (64%), Gaps = 28/529 (5%)
Query: 394 KEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD--------------- 438
+ AQ ++EYLH+TR + F DAEH+SK SP F KL+E+ ++
Sbjct: 112 RAAQRTLMEYLHVTRGMCFSDAEHISKRSPVFASKLLEKVKDAAREPAEGGDEVVFKSVV 171
Query: 439 ---------VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLEN 489
V + + R Y+PINEFEPF ES+GL E S FLP +LMFLSDDELL EN
Sbjct: 172 KKRDMKDERVSKALVRLFNYNPINEFEPFLESIGLSQSECSSFLPRDLMFLSDDELLFEN 231
Query: 490 YHVLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLL 549
Y VLCNYG+AR KIGKI ++A EVF F GV SKL+ E LG S++ + K++ +P +L
Sbjct: 232 YRVLCNYGIARCKIGKIYRDATEVFGFGHGVLVSKLNDIEELGFSKTSVIKLVTATPVVL 291
Query: 550 IGDVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGL 609
+ D N E +++LQ L + I+ WI + L ++++NW+ M + + F +LG + E + L
Sbjct: 292 VRDPNVE-LKILQWLDGIGIQWDWISQFLSARKSYNWTKMNQVPQFFSDLGFTKEGIAKL 350
Query: 610 IRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLF 669
+RQHP L +GSG + T++ ++LK GS + EL +FL FP + V F NL + +LFL
Sbjct: 351 VRQHPDFLLDGSGKVLFTLVLIMLKAGSGKKELFDLFLNFPDVPVENFTKNLRKGMLFLA 410
Query: 670 EIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGS 729
E+ + ++I KI+ ++GS +KK N+IL +LN GKKRL + I ENP L LGS
Sbjct: 411 EVGLSNEDIKKIVLSDGQMLGSAPIKKPNSILTHLNTGKKRLRKIILENPKLLGSYRLGS 470
Query: 730 RVGRLPAEK--ERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGL 787
+V +LP E+S + KFL +G+VE S EM KALK FRG+G ELQ+R+D LVNAG
Sbjct: 471 KVSQLPRIDPFEQSFKGKIKFLKSIGFVEGSEEMKKALKVFRGKGDELQDRYDFLVNAGF 530
Query: 788 DRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFL 847
D KDV MI+++PQILN K DV++SKI FL+N GYPLS LV FP+Y ++T ER K+R
Sbjct: 531 DPKDVVNMIKMAPQILNQKIDVVESKISFLLNDTGYPLSELVCFPAYLSFTVERTKVRLF 590
Query: 848 MYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQ 896
MYNWL + G + +LA ST++A S+K FM+ +V +HP GPEVW+ +K++
Sbjct: 591 MYNWLLERGAVP-QLALSTVLACSDKCFMRYYVKKHPMGPEVWENYKRE 638
>gi|226494423|ref|NP_001152516.1| mTERF family protein [Zea mays]
gi|195657075|gb|ACG48005.1| mTERF family protein [Zea mays]
Length = 649
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/532 (45%), Positives = 337/532 (63%), Gaps = 27/532 (5%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD----------------- 438
AQ +EYLH+TR L F DAEH+SK+SP FV L+ + ++ +
Sbjct: 104 AQQTFMEYLHVTRGLSFPDAEHISKHSPVFVSNLLHQVKDAIKDPVEGDEAAFRSKVKTK 163
Query: 439 ------VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHV 492
+ + R RY+PINEFEPFFES+GLKP EY PFL +LMFLSDDE +LENY V
Sbjct: 164 EIRDERATKALERLFRYYPINEFEPFFESMGLKPSEYQPFLRRDLMFLSDDETVLENYRV 223
Query: 493 LCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGD 552
LCNYGV RNKIG+I A E F F GV SKL A E LG S+S + K++ C P +L
Sbjct: 224 LCNYGVMRNKIGQIYIGAAEAFSFGDGVLASKLRALEDLGFSKSTVIKLMACCPAVLTCG 283
Query: 553 VNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQ 612
+ E +++++ L + I+ WI + L ++++NW M+ + LG +E +G LIRQ
Sbjct: 284 PHAE-LKIIEWLDDIGIQRDWIGQFLSVKKSYNWRKMVEVPQFLAELGFDNEGIGKLIRQ 342
Query: 613 HPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIK 672
HP L +GSG+ + ++LK GS + +L ++FL FP ++ R F N+ LFL +I
Sbjct: 343 HPDFLLDGSGNALFRAVVIMLKAGSGKGDLFNLFLDFPDVQARSFARNIQSVTLFLTDID 402
Query: 673 MKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVG 732
+ ++I K + + ++GS +KK N+IL YL+VGKKRL + I+E P +L K LG +V
Sbjct: 403 VSEEDIKKFVVANASMLGSARVKKANSILTYLSVGKKRLWKIIREEPRQLMKYTLGLKVS 462
Query: 733 RLP---AEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDR 789
RLP E+S + KFL +VG+ E SN+M KALK FRG+G ELQ+RFD LVNAG +
Sbjct: 463 RLPPCDEIAEKSLKEKVKFLKNVGFAEGSNDMNKALKAFRGKGDELQDRFDFLVNAGFEP 522
Query: 790 KDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMY 849
KDV MI+V+PQ+LN K V++SKI FLVN YPLS LV +P++ ++T ER K RFLMY
Sbjct: 523 KDVSHMIKVAPQVLNQKTHVLQSKISFLVNETAYPLSVLVGYPAFLSFTIERTKARFLMY 582
Query: 850 NWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYSEE 901
+WL++ G + A STL+A S K F + V +H KGPEVW+ KK++ +++
Sbjct: 583 DWLRERGLVPPNFALSTLLACSEKRFFKYLVLKHQKGPEVWEKLKKEVAADK 634
>gi|414869545|tpg|DAA48102.1| TPA: mTERF family protein [Zea mays]
Length = 649
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/532 (45%), Positives = 337/532 (63%), Gaps = 27/532 (5%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD----------------- 438
AQ +EYLH+TR L F DAEH+SK+SP FV L+ + ++ +
Sbjct: 104 AQQTFMEYLHVTRGLSFPDAEHISKHSPVFVSNLLHQVKDAIKDPVEGDEAAFRSKVKTK 163
Query: 439 ------VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHV 492
+ + R RY+PINEFEPFFES+GLKP EY PFL +LMFLSDDE +LENY V
Sbjct: 164 EIRDERATKALERLFRYYPINEFEPFFESMGLKPSEYQPFLRRDLMFLSDDETVLENYRV 223
Query: 493 LCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGD 552
LCNYGV RNKIG+I A E F F GV SKL A E LG S+S + K++ C P +L
Sbjct: 224 LCNYGVMRNKIGQIYIGAAEAFSFGDGVLASKLRALEDLGFSKSTVIKLMACCPAVLTCG 283
Query: 553 VNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQ 612
+ E +++++ L + I+ WI + L ++++NW M+ + LG +E +G LIRQ
Sbjct: 284 PHAE-LKIIEWLDDIGIQRDWIGQFLSVKKSYNWRKMVEVPQFLAELGFDNEGIGKLIRQ 342
Query: 613 HPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIK 672
HP L +GSG+ + ++LK GS + +L ++FL FP ++ R F N+ LFL +I
Sbjct: 343 HPDFLLDGSGNALFRAVVIMLKAGSGKGDLFNLFLDFPDVQARSFARNIQSVTLFLTDID 402
Query: 673 MKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVG 732
+ ++I K + + ++GS +KK N+IL YL+VGKKRL + I+E P +L K LG +V
Sbjct: 403 VSEEDIKKFVVANASMLGSARVKKANSILTYLSVGKKRLWKIIREEPRQLMKYTLGLKVS 462
Query: 733 RLP---AEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDR 789
RLP E+S + KFL +VG+ E SN+M KALK FRG+G ELQ+RFD LVNAG +
Sbjct: 463 RLPPCDEIAEKSLKEKVKFLKNVGFAEGSNDMNKALKAFRGKGDELQDRFDFLVNAGFEP 522
Query: 790 KDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMY 849
KDV MI+V+PQ+LN K V++SKI FLVN YPLS LV +P++ ++T ER K RFLMY
Sbjct: 523 KDVSHMIKVAPQVLNQKTHVLQSKISFLVNETAYPLSVLVGYPAFLSFTIERTKARFLMY 582
Query: 850 NWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYSEE 901
+WL++ G + A STL+A S K F + V +H KGPEVW+ KK++ +++
Sbjct: 583 DWLRERGLVPPNFALSTLLACSEKRFFKYLVLKHQKGPEVWEKLKKEVAADK 634
>gi|449437591|ref|XP_004136575.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Cucumis sativus]
gi|449501907|ref|XP_004161491.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Cucumis sativus]
Length = 335
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/333 (70%), Positives = 270/333 (81%), Gaps = 15/333 (4%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED+KKRK+E+ + +F SS +HLR+LL+PL K QLVDLL+RLGSQYPSIAE
Sbjct: 1 MEDLKKRKLEE---TVGNAEF-----SSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAE 52
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIKSVASADPV+RKLFVRGLAWNTTSETLCAAF VHGEIEEGAVIYDKATGKSRGYGFIT
Sbjct: 53 EIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFIT 112
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
YKHMEST++AL+APSK+I+GR+AVCNLACEGLSG S PDLAQRKLYIGGLSP++T+EVL
Sbjct: 113 YKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVL 172
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
LNFFGR+G+IEEGSVAYDKDTNESRGFGFVTY T EAAKKA+DDP KT GGR IIVKLAD
Sbjct: 173 LNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLAD 232
Query: 241 THKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPNT 300
+H+ K Q Q+ A+ +P P+ AGYPQ GK H PVGY+YPQ + YP +SY SP T
Sbjct: 233 SHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYP-ASYPSPTT 291
Query: 301 APVPYPTQPPISYP-PIPLKKD-----PIGPIG 327
A Y +QP + YP + KKD PI P G
Sbjct: 292 AHASYASQPQMPYPHQVIGKKDATGLHPITPAG 324
>gi|115477308|ref|NP_001062250.1| Os08g0518200 [Oryza sativa Japonica Group]
gi|28411850|dbj|BAC57325.1| unknown protein [Oryza sativa Japonica Group]
gi|113624219|dbj|BAF24164.1| Os08g0518200 [Oryza sativa Japonica Group]
gi|215686698|dbj|BAG88951.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215716996|dbj|BAG95359.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201463|gb|EEC83890.1| hypothetical protein OsI_29897 [Oryza sativa Indica Group]
gi|222640869|gb|EEE69001.1| hypothetical protein OsJ_27943 [Oryza sativa Japonica Group]
Length = 636
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/530 (44%), Positives = 345/530 (65%), Gaps = 27/530 (5%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD----------------- 438
AQ A +EYLH+TR + F DAEHMSK SP F+ KL+E+ ++
Sbjct: 97 AQKAFMEYLHVTRGICFSDAEHMSKRSPIFISKLLEKVKDAAKEPTEEGEEVPFRSKVKK 156
Query: 439 -------VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYH 491
V + + R +HPINEFEPFFES+G+ P EY P LP +LMFL+DDE +L+N+
Sbjct: 157 REMRDERVSKALVRLFNFHPINEFEPFFESIGIAPGEYEPLLPRDLMFLNDDETMLDNFR 216
Query: 492 VLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIG 551
VLCNYG+AR KIG+I ++A EVF F GV SKL A E GLS++ + K+++ SP +L+
Sbjct: 217 VLCNYGIARTKIGRIYRDATEVFSFGHGVLASKLKALEDQGLSKTSVIKLVMSSPVILVR 276
Query: 552 DVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIR 611
D N E +++L+ L + I+ W+ L ++++NW M++ + F +LG ++E +G L+R
Sbjct: 277 DPNVE-LKILRWLDDVGIQRDWLGRFLSVKKSYNWGKMVQVPQFFSDLGFTNEGIGKLVR 335
Query: 612 QHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEI 671
Q+P LF GSG + + + ++LK G + EL +FL FP + V F NL + + FL EI
Sbjct: 336 QNPDFLFSGSGKMLFSAVLVMLKAGFGKKELVDLFLNFPNLSVDNFTRNLRRGIFFLAEI 395
Query: 672 KMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRV 731
+ ++I K + + ++GS LKK N+I+ +L+VGKKRLC + E+P L K +LG++V
Sbjct: 396 GVSEEDIKKFVVSNGSILGSVQLKKPNSIMTHLSVGKKRLCRMVMEDPQLLMKFSLGAKV 455
Query: 732 GRLPAEK--ERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDR 789
R+P E S + KFL ++G++E S M + LK FRG+G EL++R+D LV GLD
Sbjct: 456 SRIPKVDLHEASFKEKVKFLQNLGFMEGSERMTRGLKAFRGKGDELKDRYDFLVKTGLDP 515
Query: 790 KDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMY 849
+ V +MI ++P +LN K V++SKI FLVN +GYPLS LV FPS+ ++T ER KLRFLMY
Sbjct: 516 EHVVQMITMAPHVLNQKIHVLESKISFLVNDMGYPLSTLVIFPSFLSFTVERTKLRFLMY 575
Query: 850 NWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQIYS 899
NWL ++G I LA STL+A ++K F++++V RHP G EVW+ FK ++ S
Sbjct: 576 NWLLEKGVIATGLALSTLLATADKHFVKRYVVRHPMGLEVWEKFKTEVAS 625
>gi|356553729|ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803162 [Glycine max]
Length = 564
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/510 (46%), Positives = 330/510 (64%), Gaps = 3/510 (0%)
Query: 389 SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLR 448
S +R EAQ A+++Y+H TR F DAE++S+NSP F+E L+ +++ DV R + RFLR
Sbjct: 48 SRLLRSEAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLVSMIDDKDDVLRSLERFLR 107
Query: 449 YHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILK 508
Y+PINEFEPFFESLG+ P E FLP + FL+DD +LL+N+H LCNYGV RN++GK K
Sbjct: 108 YNPINEFEPFFESLGIDPSELYLFLPHGMFFLADDHVLLQNFHALCNYGVPRNRMGKFFK 167
Query: 509 EAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSME 568
EA+E+F + GV SKL AYE LGL +S + K++VC P LL+GDVN EFV VL LK +
Sbjct: 168 EAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVSVLDWLKRIG 227
Query: 569 IESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTM 628
IES W+ +L T++W ML + +G S+EQ+ L R++P LL EG G +
Sbjct: 228 IESDWMVNYLSCSRTYSWKRMLDAMLFLHKVGYSEEQMHNLFRENPKLLLEGFGRKVYLV 287
Query: 629 IGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLL 688
G LLK G N + S F+++P I + K ++ + + FL I M D+I IL + L
Sbjct: 288 FGRLLKVGVEMNVVYSYFVEYPNILLNKCANDMLRVIDFLGAIGMGKDDITHILSKYMHL 347
Query: 689 VGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRV---GRLPAEKERSQLLR 745
+ + +LK T+ L VGK L + I+++PL+L LA G++ + R+ L +
Sbjct: 348 LITRSLKGHKTVCQELKVGKADLYQIIKDDPLKLISLASKQEQKGNGKVDSHDPRNYLEK 407
Query: 746 TKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNM 805
T FLL +GY+ENS EMAKALK FRGRG +LQERFDCLV AGLD V EMI+ +P IL+
Sbjct: 408 TTFLLKLGYIENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQ 467
Query: 806 KKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASS 865
K VI+ KIDFL N L YPL LV FP+YF + ++I R MY WLK+ ++ L S
Sbjct: 468 NKAVIQKKIDFLKNVLDYPLEGLVGFPTYFCHDLDKIVERLSMYAWLKERNAVNPTLTLS 527
Query: 866 TLIAYSNKTFMQQFVNRHPKGPEVWQTFKK 895
T+IA ++K F++ FVN HP+G +W+ K+
Sbjct: 528 TIIASNDKRFVKYFVNVHPQGSAIWKGLKR 557
>gi|224115418|ref|XP_002332130.1| predicted protein [Populus trichocarpa]
gi|222875180|gb|EEF12311.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/509 (46%), Positives = 331/509 (65%), Gaps = 4/509 (0%)
Query: 389 SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLR 448
S R +AQ + +YLH TRN F DAEH+SKNSPHF+E L+ + +N DV RL+ +FLR
Sbjct: 64 SRVARTDAQRVLFDYLHCTRNFDFNDAEHISKNSPHFIENLLTKIDNDKDVVRLLNKFLR 123
Query: 449 YHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILK 508
Y+PINEFEPFFESLGL+P E LP +LM+L D+++LLEN+HVLCNYG+ R+KIG++ K
Sbjct: 124 YNPINEFEPFFESLGLRPSEVPSVLPPHLMYLGDNDMLLENFHVLCNYGIPRSKIGRMYK 183
Query: 509 EAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSME 568
EA E+F ++ GV + KL AYE LGLS++ + K++ C P LLIG V+ EFV VL L
Sbjct: 184 EAIEIFGYNYGVLKLKLLAYENLGLSKTTVVKLVSCCPSLLIGGVDREFVNVLGRLNRAG 243
Query: 569 IESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTM 628
+++ I +L +E+++W ++ + +G S+EQ L++ +P L+FEGSG +
Sbjct: 244 LKNDLIGGYLSAKESYDWKRLIDTIYFLDKVGYSEEQFRDLLKTNPVLVFEGSGKKVYLL 303
Query: 629 IGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLL 688
G LLK G NE+ S+F Q+PQI K NL + + L I M V++I I+ L
Sbjct: 304 FGRLLKLGLKVNEIYSLFTQYPQILSAKRAKNLLRGIHILLGIGMGVEDIANIISTQMEL 363
Query: 689 VGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRV---GRLPAEKERSQLLR 745
+ S LK T+ K LC+ + ENPLEL L S V L ++ ++L +
Sbjct: 364 LCSAALKGPVTLRRQFKDKKDSLCQILMENPLELFHLDSKSEVESSKMLSSQGPTNKLEK 423
Query: 746 TKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNM 805
T FLL +GYVENS+EMA+ALK FRGRG +LQERFDC V AGLD V I+ +P +LN
Sbjct: 424 TAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDCNVVSSFIKQAPMVLNQ 483
Query: 806 KKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASS 865
KDVI+ KID L N LG ++ LV+FPSY Y ERI LRF MY WLK++G +L+ S
Sbjct: 484 TKDVIEKKIDCLTN-LGCSVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAKPKLSLS 542
Query: 866 TLIAYSNKTFMQQFVNRHPKGPEVWQTFK 894
T++A S+ F++ FV+ HP+GP +W++ +
Sbjct: 543 TILACSDARFIKYFVDVHPEGPAMWESLR 571
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/335 (69%), Positives = 265/335 (79%), Gaps = 14/335 (4%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED KKRK+E D +G DF SS++ LR L++PL+K QLVDLL++LGSQYPSIAE
Sbjct: 1 MEDFKKRKLELDEAGGDG-DF-----SSKEELRFLIEPLAKPQLVDLLAKLGSQYPSIAE 54
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIKS+ASADP HRKLFVRGLAWNTTSETL AAF+ HGEIEEGAVIYDK TGKSRGYGFIT
Sbjct: 55 EIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRGYGFIT 114
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+K+MESTQ ALRAPSKLIDGRLAVCNLACE LSG S+ PDL+ RKLYIG LSPEVT+E+L
Sbjct: 115 FKNMESTQQALRAPSKLIDGRLAVCNLACESLSGTSSAPDLSLRKLYIGSLSPEVTSEIL 174
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
LN+F RHGEIEEGSVAYD+DTNESRGFGFVTYKT EAAKKA+DD KTLGGR I+VK AD
Sbjct: 175 LNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDLEKTLGGRNIVVKYAD 234
Query: 241 THKGKPPQTQLPAAVVPV-PLPLGAGY-PQAGKAHANT-PPVGYSYPQNVPPYPTSSYTS 297
+ KGK Q PA VVP+ LP+ GY Q GKA+ ++ PP+ YSYPQ V PY Y +
Sbjct: 235 SQKGKTGQPPFPAGVVPMAALPMNPGYMQQPGKANVSSRPPINYSYPQTVAPYSALPYPN 294
Query: 298 PNTAPVPYPTQPPISYPPIPLKKD-----PIGPIG 327
P TAP PYPTQ I YP + KKD P P+G
Sbjct: 295 PPTAPSPYPTQGQIPYPQVSAKKDRHGFLPTQPVG 329
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 255/327 (77%), Gaps = 10/327 (3%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
ME +KKRK+E D + + +S++ LR L++PL+K QLVDLL++LGSQYPSIAE
Sbjct: 1 MEGLKKRKLELD-------EAGNGELASKEELRFLIEPLAKPQLVDLLAKLGSQYPSIAE 53
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIKS+ASADP HRKLFVRGLAWNTTSETL AAF+ HGEIEEGAVI+DK TGKSRGYGFIT
Sbjct: 54 EIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRGYGFIT 113
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+K+MESTQ ALRAPSKLIDGRLAVCNLACE LSG S+ PDL+ RKLYIG LSPEVT+E+L
Sbjct: 114 FKNMESTQQALRAPSKLIDGRLAVCNLACESLSGTSSAPDLSLRKLYIGSLSPEVTSEIL 173
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
LN+F RHGEIEEGSVAYD+DTNESRGFGFVTYKT EAAKKA+DD K LGGR I+VK AD
Sbjct: 174 LNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDVEKMLGGRNIVVKYAD 233
Query: 241 THKGKPPQTQLPAAVVPV-PLPLGAGYPQAGKAHANT-PPVGYSYPQNVPPYPTSSYTSP 298
+HKGK Q P+ VVP+ PLP+ GY Q GK H + PP+ YSYPQ V PY S Y +P
Sbjct: 234 SHKGKTGQPPFPSGVVPMAPLPMNPGYMQPGKGHVGSGPPINYSYPQTVAPYSASPYPNP 293
Query: 299 NTAPVP-YPTQPPISYPPIPLKKDPIG 324
YP Q I YP + KKD G
Sbjct: 294 PPTAPSLYPIQWQIPYPQVSAKKDQHG 320
>gi|297804174|ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
lyrata]
gi|297315807|gb|EFH46230.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/522 (42%), Positives = 319/522 (61%), Gaps = 10/522 (1%)
Query: 383 NENVSKSPFVRKEAQAAMLEYLHLTRNLPFMDA------EHMSKNSPHFVEKLIERFE-N 435
N ++ SP R+ Q L+ + + NL + + EH+SKNSP F+ L+ + + N
Sbjct: 27 NNCIAFSPIPRQN-QVQRLKAVFVRINLSYNNTRLTYQLEHISKNSPCFMSTLLSKIDDN 85
Query: 436 QLDVQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCN 495
DV R + +FLRY+PINEFEPFFESLGL P E+ FLP LMFLSDD ++ EN+H LCN
Sbjct: 86 HKDVSRGLTKFLRYNPINEFEPFFESLGLCPYEFETFLPQKLMFLSDDGIMFENFHALCN 145
Query: 496 YGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNT 555
YG+ R KIG + KEARE+F+++ G+ KL YE LGLS++ + K++ P LL+G ++
Sbjct: 146 YGIPRGKIGHMYKEAREIFRYESGLLAMKLRDYENLGLSKATVIKLVTSCPLLLVGGIDA 205
Query: 556 EFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPG 615
EF V+ LK +++ W+ +L ++ T++W +L + +GC DE L L++ +P
Sbjct: 206 EFASVVDKLKGLQVGCDWLGRYLSDRRTYSWRRILETIEFLDKVGCKDENLSSLLKTYPA 265
Query: 616 LLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKV 675
L+ EGSG + G L K G NE+ +F+ P++ K + N+ + L FL I+M+
Sbjct: 266 LVIEGSGKKFYVLFGRLFKVGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMET 325
Query: 676 DEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGS--RVGR 733
I KIL H L+GSC+L T LNV + LC+ +++ PL L + R +
Sbjct: 326 QFITKILLSHMELIGSCSLPAPRTACLSLNVRQDELCQLLKKEPLRLFSFVSTTKKRKSK 385
Query: 734 LPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVC 793
+E R L +T FLL +GYVENS+EM KALK FRGRG +LQERFDCLV AGL+ V
Sbjct: 386 PLSEDSRKYLEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVT 445
Query: 794 EMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLK 853
E+IR +P ILN+ KDVI+ KI L LGYP+ LV FP+Y Y +RI RF MY WL+
Sbjct: 446 EIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLR 505
Query: 854 DEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKK 895
+ L+ ST++ + F++ FVN HP+GP +W++ +
Sbjct: 506 ERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQ 547
>gi|357493099|ref|XP_003616838.1| hypothetical protein MTR_5g084810 [Medicago truncatula]
gi|355518173|gb|AES99796.1| hypothetical protein MTR_5g084810 [Medicago truncatula]
Length = 592
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/571 (40%), Positives = 331/571 (57%), Gaps = 30/571 (5%)
Query: 348 FVENPKKSLKIAFLPTGSFYFAQTPRLF----SKSLPFSNE--NVSKSP---------FV 392
F+ NP + P S + Q P S S+ F N N SKS ++
Sbjct: 15 FLYNPNST------PQNSNFSHQNPNFLRQNPSSSISFKNSILNCSKSTQIPALSPPIYI 68
Query: 393 RK----EAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFE--NQLDVQRLIARF 446
++ +AQ A+ EYLH T+N F DAE +SKNSPHF++ LI + + DV R ++R+
Sbjct: 69 KRATKIQAQRALFEYLHYTQNYTFSDAEFISKNSPHFIDFLISKINIPDDGDVFRALSRY 128
Query: 447 LRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKI 506
L YHPINEFEPF ESLG+ + FLP FL DD +L++N+HVLC +GV RN++ KI
Sbjct: 129 LMYHPINEFEPFLESLGINHTKLEKFLPKGCYFLCDDSVLVDNFHVLCYHGVPRNRMAKI 188
Query: 507 LKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKS 566
EARE+F + GV + K AYE LGLS+S + K+ VC P LL+GDV++EFV VL LK
Sbjct: 189 YTEAREIFGYGNGVLEKKFQAYEDLGLSKSSLIKLFVCCPLLLVGDVDSEFVVVLDWLKR 248
Query: 567 MEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIAL 626
+ IES W + T++W M+ L F +G S++ + L + P LL EG G
Sbjct: 249 IGIESKWFVNCMSSSNTYSWKRMIETLEFFHQVGYSEKHMYDLFKVDPNLLLEGLGRKLY 308
Query: 627 TMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHF 686
+G +K G N +CS F++ + K + NL + FL+ I+M+ D+I +L +
Sbjct: 309 LFLGRFIKSGVDVNVVCSCFIEHSDMLSSKRVENLMSVISFLYNIRMEQDDIAHVLSNYM 368
Query: 687 LLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKE---RSQL 743
++ ++K + L V K LC I ++PLEL LA + R + S+L
Sbjct: 369 HILSKHSIKGYRAVCMELGVPKADLCRIINDDPLELISLACKQKHKRSGGQSYCVPLSKL 428
Query: 744 LRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQIL 803
+T FLL +GY+ENS EM +A+K F GRG +LQER DCLV AGLD M++ P+IL
Sbjct: 429 EKTAFLLKLGYIENSEEMEEAVKLFPGRGDQLQERLDCLVEAGLDCSTAIRMVKRVPKIL 488
Query: 804 NMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLA 863
+K++VI+ KIDFL N LGYP+ LV +P+YF +R+ R MY WLK+ + L+
Sbjct: 489 VLKRNVIQKKIDFLKNTLGYPIECLVRYPTYFLQDVDRMSARVSMYEWLKERNAVSHALS 548
Query: 864 SSTLIAYSNKTFMQQFVNRHPKGPEVWQTFK 894
ST+++Y K F+Q FVN HP+GP +WQ K
Sbjct: 549 LSTIVSYDEKRFVQVFVNMHPEGPTIWQRIK 579
>gi|79478031|ref|NP_193700.2| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|332658810|gb|AEE84210.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 575
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/483 (43%), Positives = 308/483 (63%), Gaps = 3/483 (0%)
Query: 416 EHMSKNSPHFVEKLIERFE-NQLDVQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLP 474
EH+SKNSP F+ L+ + + NQ DV + + +FLRY+PINEFEPFFESLGL P E+ FLP
Sbjct: 90 EHISKNSPCFMSTLLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLP 149
Query: 475 LNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLS 534
LMFLSDD ++ EN+H LCNYG+ R KIG++ KEARE+F+++ G+ KL YE LGLS
Sbjct: 150 RKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLS 209
Query: 535 QSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLR 594
++ + K++ P LL+G ++ EF V+ LK +++ W+ +L +++T++W +L +
Sbjct: 210 KATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIE 269
Query: 595 LFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEV 654
+GC +E+L L++ +P L+ EGSG + G L K G NE+ +F+ P++
Sbjct: 270 FLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLS 329
Query: 655 RKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEY 714
K + N+ + L FL I+M+ I KIL H L+GSC+L T LNV + LC+
Sbjct: 330 DKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKI 389
Query: 715 IQENPLELKKLALGS--RVGRLPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRG 772
+++ PL L + R + +E R L +T+FLL +GYVENS+EM KALK FRGRG
Sbjct: 390 LKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRG 449
Query: 773 AELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFP 832
+LQERFDCLV AGL+ V E+IR +P ILN+ KDVI+ KI L LGYP+ LV FP
Sbjct: 450 DQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFP 509
Query: 833 SYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQT 892
+Y Y +RI RF MY WL++ L+ ST++ + F++ FVN HP+GP +W++
Sbjct: 510 AYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWES 569
Query: 893 FKK 895
+
Sbjct: 570 INQ 572
>gi|255579005|ref|XP_002530354.1| conserved hypothetical protein [Ricinus communis]
gi|223530101|gb|EEF32015.1| conserved hypothetical protein [Ricinus communis]
Length = 534
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/253 (77%), Positives = 211/253 (83%), Gaps = 6/253 (2%)
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
L AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ ALRAPSKLIDGRLAVCNLA
Sbjct: 282 LAQAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQIALRAPSKLIDGRLAVCNLA 341
Query: 149 CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFG 208
CEGL+G S PDLAQRKLYIGGLSPE+T+E+LLNFFGRHGEIEEGSVAYDKDTNESRGFG
Sbjct: 342 CEGLTGASTTPDLAQRKLYIGGLSPEITSEMLLNFFGRHGEIEEGSVAYDKDTNESRGFG 401
Query: 209 FVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQ 268
FVTYKTVEAAKKA+DDP K LGGR+IIVKLADTHKGK QTQ+PA+V PVPL + AGY Q
Sbjct: 402 FVTYKTVEAAKKAIDDPQKVLGGRSIIVKLADTHKGKTVQTQMPASVAPVPLLMTAGYTQ 461
Query: 269 AGKAHANTPPVGYSYPQNVPPYPTSSYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPI-- 326
GKAH PVGYSYPQ +P YP SSY SP TAP PYP Q YPP+ +KK+P GP
Sbjct: 462 PGKAHPGPAPVGYSYPQTMPSYPASSYPSPPTAPAPYPLQSQYQYPPVAMKKEPFGPPAP 521
Query: 327 ----GHPATAPKR 335
G+P PK+
Sbjct: 522 MGMGGYPYYLPKQ 534
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+ D RKL++ GL+ TSE L F HGEIEEG+V YDK T +SRG+GF+TYK +E+
Sbjct: 351 TPDLAQRKLYIGGLSPEITSEMLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 410
Query: 127 TQSALRAPSKLIDGRLAVCNLA 148
+ A+ P K++ GR + LA
Sbjct: 411 AKKAIDDPQKVLGGRSIIVKLA 432
>gi|3250674|emb|CAA19682.1| putative protein [Arabidopsis thaliana]
gi|7268761|emb|CAB78967.1| putative protein [Arabidopsis thaliana]
Length = 557
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/483 (42%), Positives = 300/483 (62%), Gaps = 21/483 (4%)
Query: 416 EHMSKNSPHFVEKLIERFE-NQLDVQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLP 474
EH+SKNSP F+ L+ + + NQ DV + + +FLRY+PINEFEPFFESLGL P E+ FLP
Sbjct: 90 EHISKNSPCFMSTLLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLP 149
Query: 475 LNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLS 534
LMFLSDD ++ EN+H LCNYG+ R KIG++ KEARE+F+++ G+ KL YE LGLS
Sbjct: 150 RKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLS 209
Query: 535 QSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLR 594
++ + K++ P LL+G ++ EF V+ LK +++ W+ +L +++T++W +L +
Sbjct: 210 KATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIE 269
Query: 595 LFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEV 654
+GC +E+L L++ +P L+ EGSG KF + P++
Sbjct: 270 FLDKVGCKEEKLSSLLKTYPALVIEGSGK----------KF--------YVLFDNPEMLS 311
Query: 655 RKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEY 714
K + N+ + L FL I+M+ I KIL H L+GSC+L T LNV + LC+
Sbjct: 312 DKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKI 371
Query: 715 IQENPLELKKLALGS--RVGRLPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRG 772
+++ PL L + R + +E R L +T+FLL +GYVENS+EM KALK FRGRG
Sbjct: 372 LKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRG 431
Query: 773 AELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFP 832
+LQERFDCLV AGL+ V E+IR +P ILN+ KDVI+ KI L LGYP+ LV FP
Sbjct: 432 DQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFP 491
Query: 833 SYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQT 892
+Y Y +RI RF MY WL++ L+ ST++ + F++ FVN HP+GP +W++
Sbjct: 492 AYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWES 551
Query: 893 FKK 895
+
Sbjct: 552 INQ 554
>gi|147864061|emb|CAN83223.1| hypothetical protein VITISV_031367 [Vitis vinifera]
Length = 294
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 203/333 (60%), Positives = 228/333 (68%), Gaps = 67/333 (20%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED+KKRK+E+ + NGQ SSS + L+ LLDPLSKSQLVDLLS+LGSQYPSIAE
Sbjct: 1 MEDLKKRKLEEAS---NGQ-----ISSSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAE 52
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
EIKSVASADPVHRKLFVRGLAWNTTSETLCA
Sbjct: 53 EIKSVASADPVHRKLFVRGLAWNTTSETLCA----------------------------- 83
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
GR+AVCNLACEGLSG S PD AQRKLYIGGL+P+VT+EVL
Sbjct: 84 -------------------GRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVL 124
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
L+FFGRHGEIEEGSVAYDK+TNESRGFGFVTYKTVEAAKKA+DDP K LGGR+IIVKLAD
Sbjct: 125 LSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLAD 184
Query: 241 THKGKPPQTQLPAAVVPVPLPLGAGYP-QAGKAHANTPPVGYSYPQNVPPYPTSSYTSP- 298
+HKGK Q QL AVVP+ LPL AGYP Q GK A+ PV Y+YPQ YP +Y P
Sbjct: 185 SHKGKMIQAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYP--AYPGPP 242
Query: 299 -------NTAPVPYPTQPPISYPPIPLKKDPIG 324
+TAP PYP+QP + Y + KDP+G
Sbjct: 243 TGPAPYSSTAPAPYPSQPQMPYSSATVMKDPLG 275
>gi|224088210|ref|XP_002308372.1| predicted protein [Populus trichocarpa]
gi|222854348|gb|EEE91895.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 211/381 (55%), Positives = 246/381 (64%), Gaps = 66/381 (17%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
MED+KKRKM D +ING ++ + ++QD+LRSLLDPLSK QLVDLLSRL +
Sbjct: 1 MEDLKKRKM--DEAIING---SAETLTTQDYLRSLLDPLSKPQLVDLLSRL-----CLCG 50
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCA-----AFRVHGEIEEGAVIYDKATGKSRG 115
+I V++ G + +S C FR+HGEIEEG+VIYDKATGKSRG
Sbjct: 51 DISLVSAI----------GRFVSDSSSVCCVIDTVHEFRMHGEIEEGSVIYDKATGKSRG 100
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEV 175
YGFITYKHMES QSAL APSKLIDGR+AVCNLACEGL+G + PDL QRKLYIGGLSPE+
Sbjct: 101 YGFITYKHMESAQSALGAPSKLIDGRMAVCNLACEGLTGATTTPDLTQRKLYIGGLSPEI 160
Query: 176 TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG----- 230
++E+LL+FFGR+GEIEEGSVAY+KDTNESRGFGFVTYKTVEAAKKA+DDPHK LG
Sbjct: 161 SSEMLLHFFGRYGEIEEGSVAYNKDTNESRGFGFVTYKTVEAAKKAIDDPHKLLGDKFPV 220
Query: 231 --------------------------GRTIIVKLADTHKGKPPQTQ-LPAAVVPVPLPLG 263
GRTI VKLADTHKGK Q Q V
Sbjct: 221 AVRAATGVSPINIHLGRPFGGLKVFKGRTITVKLADTHKGKTVQMQSPAPMVPVPVPMAA 280
Query: 264 AGYPQAGKAHANT-PPVGYSYPQNVPPYPTSSYTSPNTAPVPYPTQPPISYPPIPLKKD- 321
AGY Q GKA + PVGY Y Q V YP SSY +P AP PYPTQ +SY P+ KK+
Sbjct: 281 AGYAQPGKAPVGSGTPVGYPYHQTVASYPASSYPNPPVAPAPYPTQSQVSYAPVSAKKEL 340
Query: 322 -------PIGPIGHPATAPKR 335
P+G G+P PK+
Sbjct: 341 LGLSSTPPVGMGGYPYYYPKQ 361
>gi|326504756|dbj|BAK06669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 612
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 296/526 (56%), Gaps = 20/526 (3%)
Query: 391 FVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD------------ 438
+V + AQ +YLH+ R L DA H+S+ SP F+ +L+E+ +
Sbjct: 67 WVHRAAQTTFRDYLHVKRGLCLTDANHISERSPIFLSELLEKVNKTVTKAADQDGEGPRF 126
Query: 439 -------VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYH 491
V + + R P+NEF PFFES+G++ E P LP +L FL+D +LLE+Y
Sbjct: 127 RSKVKKKVSKALVRLFHRRPVNEFRPFFESIGIRSGECDPLLPQDLTFLADAGMLLESYR 186
Query: 492 VLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIG 551
L +YGVA +KIGKI +A EVF GV +SKL A E LG ++ + K+++ +P +L+
Sbjct: 187 ALYSYGVAHDKIGKIYLKAAEVFSLGQGVLESKLEALEGLGFGKATVIKLVISTPTVLVH 246
Query: 552 DVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIR 611
D E LQ L + ++ WI + L E +++NW ++ L+ + + G + +++G +R
Sbjct: 247 DPAVELKTFLQWLDDIGVQPDWIGQFLAEYQSYNWQKIVEALQFWSDFGFTKDEIGKAVR 306
Query: 612 QHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEI 671
+HP LL E SG ++ + GS + EL + L P ++ N++ L +I
Sbjct: 307 KHPDLLLEWSGGRLREVVSNMQNMGSGKRELLDLLLNHPNLKCEDVGWNISTGSFLLHDI 366
Query: 672 KMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRV 731
M D++ K L H + + +K +TIL LNVGK RL I + P +L +GS+V
Sbjct: 367 GMSHDDVKKFLDSHGWIFAAAPMKAASTILGQLNVGKARLRRIIMKEPRQLMNYKIGSKV 426
Query: 732 GRLPAEK-ERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRK 790
RLP K E + +FL +G+VE S +M KA+K RG+GA LQ+R++ LV GLD +
Sbjct: 427 SRLPRCKPEPCVKEKREFLRRIGFVEGSEDMEKAIKAIRGKGANLQDRYNKLVEKGLDPE 486
Query: 791 DVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYN 850
DV M++++P+ILN K D I KI FLV+ +GYP S L +FP Y +T ++ KL+ LMY+
Sbjct: 487 DVAHMVKMAPRILNQKTDAIAYKISFLVHVVGYPPSALPAFPRYLEFTVDKSKLKMLMYS 546
Query: 851 WLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKKQ 896
WL G +L ST+++ S F++ V + P G EVW K++
Sbjct: 547 WLLQRGLAAPQLTLSTVLSSSETEFIKAHVYKVPMGREVWWKLKQE 592
>gi|297791279|ref|XP_002863524.1| hypothetical protein ARALYDRAFT_917019 [Arabidopsis lyrata subsp.
lyrata]
gi|297309359|gb|EFH39783.1| hypothetical protein ARALYDRAFT_917019 [Arabidopsis lyrata subsp.
lyrata]
Length = 462
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/436 (40%), Positives = 267/436 (61%), Gaps = 1/436 (0%)
Query: 461 SLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQFDVGV 520
SLGL+P E FL +L+ LSDD ++ EN+HVLC YG+ R KIG++ KEARE+F ++ GV
Sbjct: 24 SLGLRPSEIPRFLQRDLVLLSDDGIMFENFHVLCYYGIPRGKIGRMFKEAREIFGYENGV 83
Query: 521 FQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIESCWIEEHLLE 580
SKL AYE L LS+ + K++ C P LL+GD+++EFV V+ LK + I W+ +L +
Sbjct: 84 LASKLEAYESLVLSKPIVIKLVTCCPLLLVGDIDSEFVSVINKLKGVNIGCDWLARYLSD 143
Query: 581 QETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRN 640
++T+NW +L + L +G DE+L L++ +P L+ E SG+ A M+ K G N
Sbjct: 144 RKTYNWLRILETMELLDKVGFKDERLSSLLKAYPDLVGEASGNKAYIMLEKFHKVGLQMN 203
Query: 641 ELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTI 700
E+ ++ P++ + K + + + L FL I+M+ + + L CH L+ S +L +
Sbjct: 204 EIDNLVTDNPEMLLEKSVKRILETLKFLKRIRMEKQFVVRFLLCHMKLICSSSLLGPRAV 263
Query: 701 LAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEK-ERSQLLRTKFLLDVGYVENSN 759
L +G+ +LC+ I+E PL L LA + R+ + + +T FLL +GYVENS+
Sbjct: 264 WNRLKIGRDQLCQIIKEEPLRLFSLASKTNNSRIKLDSLDLRNAEKTVFLLKLGYVENSD 323
Query: 760 EMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVN 819
EM +ALK F+GRG ELQERFDC V AGLD V ++++ +P +LN K +I+ KI+ L +
Sbjct: 324 EMVRALKKFQGRGDELQERFDCFVKAGLDYNVVSQLVKRAPHMLNRPKGIIEKKINLLTD 383
Query: 820 YLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQF 879
YLGYP+ ++ P+Y Y+ ERI RF MY WLK+ RL T++ SN F+ F
Sbjct: 384 YLGYPIESVIESPTYLCYSMERIHHRFSMYIWLKERDAAMPRLTLGTIVGISNTLFVSYF 443
Query: 880 VNRHPKGPEVWQTFKK 895
VN HP+G W+ KK
Sbjct: 444 VNTHPEGRATWENIKK 459
>gi|224075774|ref|XP_002335846.1| predicted protein [Populus trichocarpa]
gi|222835772|gb|EEE74207.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/261 (57%), Positives = 198/261 (75%)
Query: 640 NELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNT 699
N++CS+FLQFPQ+E +F NL C LFL EI+M+ EI I H L++GSC LKK NT
Sbjct: 2 NQICSMFLQFPQMEFEEFFSNLRHCFLFLKEIQMEAHEIRNIFHSHPLMLGSCRLKKPNT 61
Query: 700 ILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKERSQLLRTKFLLDVGYVENSN 759
+ L+ KR+CE IQE+P LKK +GS+V RL +S++ +TKFLLD+G V++SN
Sbjct: 62 LRLALHAADKRMCEVIQESPQVLKKWVMGSKVERLQNLILKSRMQKTKFLLDLGIVDDSN 121
Query: 760 EMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVN 819
E+ KALK FRG GA++QERFDC+V AGL RKDVCEMI+ SPQILN KDV++ KIDFLVN
Sbjct: 122 EIGKALKVFRGSGAKIQERFDCIVEAGLSRKDVCEMIKASPQILNQTKDVLEMKIDFLVN 181
Query: 820 YLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQF 879
+GYP+S+LV+FPSY NYT ER++LR MYNWLKD+G L+ ST+I+ S+K F+ ++
Sbjct: 182 KVGYPVSYLVTFPSYLNYTMERVELRLAMYNWLKDQGKSVPMLSLSTVISLSDKKFINEY 241
Query: 880 VNRHPKGPEVWQTFKKQIYSE 900
VN HP+GPE+WQ KK+IY+E
Sbjct: 242 VNSHPRGPEIWQNLKKEIYAE 262
>gi|302754726|ref|XP_002960787.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
gi|300171726|gb|EFJ38326.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
Length = 359
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 219/343 (63%), Gaps = 41/343 (11%)
Query: 2 EDVKKRKMEDDNILINGQDFNSSSSS-SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
ED KKRK+ D D N S S S+D L+ LL+PLSK QLV LL GSQYP++A+
Sbjct: 6 EDTKKRKLNSD-------DSNGYSVSLSKDDLKRLLEPLSKEQLVALLIDAGSQYPAVAD 58
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+I+ VAS DP HRKLFVRGLAW TTS+ L AF+ +GEIEEGAVI DKATGKSRG+GFIT
Sbjct: 59 DIRDVASKDPAHRKLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFIT 118
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+KHM+S Q AL+ PSK IDGR+ VCNLA G S + D AQRKLYIGGLS E + E L
Sbjct: 119 FKHMDSAQRALKEPSKTIDGRITVCNLASVGSSAGAGSADQAQRKLYIGGLSYETSNETL 178
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL-A 239
LN F ++GEIEEG+VAYDK+TN+SRGF F+TYK+VEAA+KA+DDP+KT+ GR +IVKL A
Sbjct: 179 LNIFSQYGEIEEGAVAYDKNTNKSRGFAFITYKSVEAARKAIDDPNKTIEGRHVIVKLAA 238
Query: 240 DTHKGKP-----------PQTQLPAAVVPVPLP-------LGAGYPQAG--------KAH 273
+ K K PQ Q +V+ LP GAG P G A+
Sbjct: 239 EGQKEKAVSQSSAQNQGGPQVQAGYSVINPNLPAFARPTVAGAGTPALGFSPYTPGLPAY 298
Query: 274 ANTPPVGYSYPQ------NVPPYPTSSYTSPNTAPVPYPTQPP 310
+ P S PQ +P Y + Y + P P P Q P
Sbjct: 299 TSQPAYATSNPQYGGVTAAMPQYNPAQYAAQYGIPTPQPGQLP 341
>gi|296085341|emb|CBI29073.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/468 (40%), Positives = 259/468 (55%), Gaps = 88/468 (18%)
Query: 389 SPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQRLIARFLR 448
S VR EAQ + +YLH TR+ DAEHMSKNSPHF++KL+ + EN+ DV R +++FLR
Sbjct: 151 SRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFLQKLLSKVENEQDVARSLSKFLR 210
Query: 449 YHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILK 508
Y+PINEFEPFFESLGL P E S LP NLMFLSDD +++ENYHVLC+YG+AR+ IG++ K
Sbjct: 211 YNPINEFEPFFESLGLAPSEISALLPRNLMFLSDDCVMIENYHVLCDYGIARSSIGRMYK 270
Query: 509 EAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSME 568
E + +F++++G+ SK+ AYE LGLS+S + K++ C P+LL+G VN++FV VL+ +K +
Sbjct: 271 EVQAIFRYELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVLKRVKGLG 330
Query: 569 IESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTM 628
ES WI +L + ++NW M + +G S+EQ+ L + +P LLFEGSG
Sbjct: 331 FESDWIGGYLSGKSSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGSGK-KFYA 389
Query: 629 IGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLL 688
+G L FEI MKV++I I+ H L
Sbjct: 390 VGFL------------------------------------FEIGMKVEDIVSIVSSHVQL 413
Query: 689 VGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRVGRLPAEKERSQLLRTKF 748
+ L+KT +L RL Y++ + K L L GR +ER L
Sbjct: 414 LKH--LEKTTFLL--------RL-GYVENSDEMFKALKLFR--GRGDQLQERFDCL---- 456
Query: 749 LLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKD 808
+Q DC V V MI+ +P +LN K
Sbjct: 457 --------------------------VQAGLDCNV--------VSNMIKQAPSVLNQTKY 482
Query: 809 VIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEG 856
VI+ KID L N LGYPL +V+FPSY Y ERI LRF MY WL+D+G
Sbjct: 483 VIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKG 530
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 192/258 (74%), Gaps = 5/258 (1%)
Query: 1 MEDVKKRKMEDDNIL----INGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYP 56
ED KKRK+++++ L + G + S+D L+ LL+PLSK QLV LL+ GSQY
Sbjct: 4 QEDSKKRKIKEESDLHDAPMEGYEAPVPLRLSRDDLKRLLEPLSKEQLVALLTDAGSQYS 63
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A++I+ VAS DP HRKLFVRGLAW TTS+ L AF GEIEEGAVI DKATGKSRG+
Sbjct: 64 AVADDIREVASKDPAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGF 123
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVT 176
GFIT+KHM+S Q AL+ PSK IDGR+ VCNLA G SG D AQRKLYIGGLS E +
Sbjct: 124 GFITFKHMDSAQRALKEPSKTIDGRITVCNLASVGTSGSGGTNDQAQRKLYIGGLSYETS 183
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
E LLN F ++GEIEEG+VAYDK+TN+SRGF FVTYKTVEAA+ A+DDP+KT+ GR +IV
Sbjct: 184 NETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPNKTIEGRHVIV 243
Query: 237 KL-ADTHKGKPPQTQLPA 253
KL A+ K K PQ P+
Sbjct: 244 KLAAEGQKEKAPQVSAPS 261
>gi|22327586|ref|NP_680395.1| mitochondrial transcription termination factor-like protein
[Arabidopsis thaliana]
gi|332007823|gb|AED95206.1| mitochondrial transcription termination factor-like protein
[Arabidopsis thaliana]
Length = 414
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 247/411 (60%), Gaps = 1/411 (0%)
Query: 486 LLENYHVLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCS 545
+ EN+HVLC YG+ R+KIG++ KEARE+F ++ GV SKL YE+L L ++ + K++ C
Sbjct: 1 MFENFHVLCYYGIPRDKIGRLYKEAREIFVYENGVLASKLEPYEILVLRKAIVIKLVTCC 60
Query: 546 PYLLIGDVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQ 605
P LL+G ++ EFV V+ LK + + W+ +L ++T+NW +L + L +G +++
Sbjct: 61 PLLLVGGIDCEFVSVVNKLKGLNLGCDWLARYLSVRKTYNWRRILETMELLEKVGFKEKK 120
Query: 606 LGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCL 665
L L++ +P L+ E SG+ A M K G NE+ + + ++ + K + + + L
Sbjct: 121 LSNLLKAYPDLVGETSGNKAYIMFEKFHKVGLQMNEIDKLLIDNSEMLLEKSVKRILEAL 180
Query: 666 LFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKL 725
FL I+++ + + L+CH + S +L + L + + LC+ I+E PL L +
Sbjct: 181 KFLKCIRIEKQFVVRFLQCHMKHICSSSLLVPRAVWNRLKIRRDELCQIIKEEPLRLFSI 240
Query: 726 ALGSRVGRLPAEKERSQ-LLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVN 784
A + GR+ + S+ +T FLL +GYVENS+EM +ALK F+GRG ELQERFDC V
Sbjct: 241 ASKTNKGRIELDSLDSRNAEKTTFLLKLGYVENSDEMVRALKKFQGRGDELQERFDCFVK 300
Query: 785 AGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKL 844
AGLD V ++++ +P ILN KD+I+ KI L++YL YP+ ++ P+Y Y+ +RI
Sbjct: 301 AGLDYNVVSQLVKRAPHILNRPKDIIEKKIIMLIDYLVYPIESVIESPTYLCYSMKRIHQ 360
Query: 845 RFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKK 895
RF MY WL++ + RL T++ SN + FVN HP+GP W+ KK
Sbjct: 361 RFTMYIWLRERDAVIPRLTLGTVVGISNTLIVPYFVNTHPEGPATWENIKK 411
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 204/294 (69%), Gaps = 19/294 (6%)
Query: 3 DVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEI 62
D KKRK++++ NG S +DHL SLL+PLSK QL+ LL GS YP+IAEEI
Sbjct: 6 DGKKRKLDEE---ANGAALQLS----KDHLHSLLEPLSKEQLISLLVDAGSSYPAIAEEI 58
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K VAS DP HRKLFVRGLAW T+S+TLC AF +GEIEEGAVI DKA+GKSRG+GF+T+K
Sbjct: 59 KDVASKDPAHRKLFVRGLAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFK 118
Query: 123 HMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
HM+S Q AL+ PSK IDGR+ V NLA +G D AQRKLYIGGLS + + LL
Sbjct: 119 HMDSAQKALKEPSKTIDGRITVSNLAVAS-TGPGQSADQAQRKLYIGGLSYDTANDKLLE 177
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTH 242
F ++GEIEEGSVAYDK+TN+SRGF FVT+KTVEA K+A+ +P+KT+ GRT+ VKLA
Sbjct: 178 VFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEATKRALKEPNKTIDGRTVTVKLAADG 237
Query: 243 KGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSY----PQNVPPYPT 292
+ + PQ+Q AV P P+ PQ A+ P SY PQ VP YP+
Sbjct: 238 QKEKPQSQ--PAVSPQMQPI----PQLQTAYGTEYPSLNSYHRPGPQ-VPAYPS 284
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 281 bits (720), Expect = 8e-73, Method: Composition-based stats.
Identities = 152/265 (57%), Positives = 182/265 (68%), Gaps = 13/265 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
GSQY ++A++I+ VAS DP HRKLFVRGLAW TTS+ L AF GEIEEGAVI DKATG
Sbjct: 12 GSQYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATG 71
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
KSRG+GFIT+KHM+S Q AL+ PSK IDGR+ VCNLA G SG D AQRKLYIGGL
Sbjct: 72 KSRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLASVGTSGSGGTNDQAQRKLYIGGL 131
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
S E + E LLN F ++GEIEEG+VAYDK+TN+SRGF FVTYKTVEAA+ A+DDP+KT+ G
Sbjct: 132 SYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPNKTIEG 191
Query: 232 RTIIVKL-ADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAG---KAHANTPP----VGYSY 283
R +IVKL A+ K K PQ P+ P P GY A+A PP +G+S
Sbjct: 192 RHVIVKLAAEGQKEKAPQVSAPSQ-GPQAQP---GYNVVNPNIPAYARPPPPGTILGFSP 247
Query: 284 PQNVPPYPTSSYTSPNTAPVPYPTQ 308
VP Y +++Y T Y Q
Sbjct: 248 HTAVPAY-SAAYAGIATMASQYTPQ 271
>gi|110739994|dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]
Length = 346
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 204/343 (59%), Gaps = 2/343 (0%)
Query: 555 TEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHP 614
EF V+ LK +++ W+ +L +++T++W +L + +GC +E+L L++ +P
Sbjct: 1 AEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEEKLSSLLKTYP 60
Query: 615 GLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMK 674
L+ EGSG + G L K G NE+ +F+ P++ K + N+ + L FL I+M+
Sbjct: 61 ALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRME 120
Query: 675 VDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGS--RVG 732
I KIL H L+GSC+L T LNV + LC+ +++ PL L + R
Sbjct: 121 TQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKS 180
Query: 733 RLPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDV 792
+ +E R L +T+FLL +GYVENS+EM KALK FRGRG +LQERFDCLV AGL+ V
Sbjct: 181 KPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVV 240
Query: 793 CEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWL 852
E+IR +P ILN+ KDVI+ KI L LGYP+ LV FP+Y Y +RI RF MY WL
Sbjct: 241 TEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWL 300
Query: 853 KDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTFKK 895
++ L+ ST++ + F++ FVN HP+GP +W++ +
Sbjct: 301 RERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQ 343
>gi|255641990|gb|ACU21262.1| unknown [Glycine max]
Length = 220
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 151/201 (75%), Gaps = 3/201 (1%)
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
MESTQ ALRAPSKLIDGRLAVCNLACE LSG S+ PDL+ RKLYIG LSPEVT+E+LLN+
Sbjct: 1 MESTQQALRAPSKLIDGRLAVCNLACESLSGTSSAPDLSLRKLYIGSLSPEVTSEILLNY 60
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F RHGEIEEGSVAYD+DTNESRGFGFVTYKT EAAKKA+DD K LGGR I+VK AD+HK
Sbjct: 61 FARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDVEKMLGGRNIVVKYADSHK 120
Query: 244 GKPPQTQLPAAVVPV-PLPLGAGYPQAGKAHANT-PPVGYSYPQNVPPYPTSSYTSPNTA 301
GK Q P+ VVP+ PLP GY Q GK H + PP+ YSYPQ V PY S Y +P
Sbjct: 121 GKTGQPPFPSGVVPMAPLPRNPGYMQPGKGHVGSGPPINYSYPQTVAPYSASPYPNPPPT 180
Query: 302 PVP-YPTQPPISYPPIPLKKD 321
YP Q I YP + KKD
Sbjct: 181 APSLYPIQWQIPYPQVSAKKD 201
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKL++ L+ TSE L F HGEIEEG+V YD+ T +SRG+GF+TYK E+ + A+
Sbjct: 41 RKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAID 100
Query: 133 APSKLIDGRLAVCNLA 148
K++ GR V A
Sbjct: 101 DVEKMLGGRNIVVKYA 116
>gi|168021263|ref|XP_001763161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685644|gb|EDQ72038.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 160/202 (79%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
++D L+SLL+PL+K QL+ LL GS +P++A++I+ +AS DPVHRKLFVRGLAW T+S
Sbjct: 8 TRDELKSLLEPLNKDQLIALLIEAGSLFPAVADDIRDIASKDPVHRKLFVRGLAWETSSM 67
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNL 147
L AF +GE+EE VI DK TGKSRG+GFIT+KHM+S AL+ PSK IDGR+ VCNL
Sbjct: 68 ALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMDSAHRALKEPSKNIDGRITVCNL 127
Query: 148 ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
A G + ++ D AQRKLYIGGLS + T++ LLN F ++GEIEEG++AYDK+TN+SRGF
Sbjct: 128 ASAGSTSGTSSTDQAQRKLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKNTNKSRGF 187
Query: 208 GFVTYKTVEAAKKAVDDPHKTL 229
FVT+K++E AK+A++D +K++
Sbjct: 188 AFVTFKSIEGAKRAIEDSNKSI 209
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D RKL++ GL+++TTS+TL F +GEIEEGA+ YDK T KSRG+ F+T+K +E +
Sbjct: 140 DQAQRKLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKNTNKSRGFAFVTFKSIEGAK 199
Query: 129 SALRAPSKLID 139
A+ +K I+
Sbjct: 200 RAIEDSNKSIE 210
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
A D RKL++ GL+ E ++ L F ++GE+EE V DK T +SRGFGF+T+K ++
Sbjct: 46 ASKDPVHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMD 105
Query: 217 AAKKAVDDPHKTLGGRTIIVKL 238
+A +A+ +P K + GR + L
Sbjct: 106 SAHRALKEPSKNIDGRITVCNL 127
>gi|255559047|ref|XP_002520546.1| conserved hypothetical protein [Ricinus communis]
gi|223540260|gb|EEF41832.1| conserved hypothetical protein [Ricinus communis]
Length = 374
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/251 (46%), Positives = 163/251 (64%), Gaps = 3/251 (1%)
Query: 647 LQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNV 706
L+ PQI K N+ Q L FL I+M+++EI I+ H L+ SC+LK+ N++ LNV
Sbjct: 118 LENPQILSAKCEKNILQALEFLLYIRMRIEEIANIIYEHMELLCSCSLKRPNSVCKELNV 177
Query: 707 GKKRLCEYIQENPLELKKLALGSRVG---RLPAEKERSQLLRTKFLLDVGYVENSNEMAK 763
K LC+ I+E+P++ L S+V ++ +E + + + FLL +GYVENS+EM +
Sbjct: 178 TKDDLCQIIREDPMKFFNLVSKSKVKSSEQILSEDQSKKRDKVAFLLRLGYVENSDEMMR 237
Query: 764 ALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGY 823
ALK FRGRG +LQER+DCLV AGLD V +IR +P +LN KDVI+ KID L LGY
Sbjct: 238 ALKKFRGRGDQLQERYDCLVQAGLDCNVVSSLIRHAPMVLNQTKDVIEKKIDCLTRCLGY 297
Query: 824 PLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRH 883
PL+ +V+FP+Y Y ERI RF MY WLKD G L+ ST++A S+ F + FV+ H
Sbjct: 298 PLTSVVAFPTYLCYDIERINHRFRMYVWLKDRGAAKPMLSLSTILACSDARFEKYFVDIH 357
Query: 884 PKGPEVWQTFK 894
P+GP VW++ +
Sbjct: 358 PEGPAVWKSLQ 368
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 379 LPFSNENVSKSPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLD 438
+ S VS++ VR EAQ + EYLH TR+ F DA+H+SKNSPHF+++L+ + +N D
Sbjct: 56 ISLSGNRVSRT--VRAEAQDVLFEYLHSTRSFSFTDADHISKNSPHFLQQLLFKIDNDKD 113
Query: 439 VQR 441
V R
Sbjct: 114 VAR 116
>gi|168024548|ref|XP_001764798.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684092|gb|EDQ70497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 147/212 (69%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
+++ ++ L++P +K QL+DLL + + EI+ +A DP HRK+FVRGL W+TT+E
Sbjct: 20 TKEDVKKLVEPFTKEQLMDLLENAALNHADVLHEIRKLADKDPGHRKIFVRGLGWDTTTE 79
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNL 147
TL F GE+EEGAVI DKATGKSRG+GF+T+KHM+ Q +L+ PSK IDGR+ VC L
Sbjct: 80 TLKTVFSQFGEVEEGAVIMDKATGKSRGFGFVTFKHMDGAQRSLKEPSKRIDGRMTVCQL 139
Query: 148 ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
A G V+ +++QRK+Y+G + +++ + LL F +GEIEEG + +DK T SRGF
Sbjct: 140 ASTGALQVNPNQEVSQRKIYVGNVPLDLSADRLLALFAGYGEIEEGPLGFDKFTGRSRGF 199
Query: 208 GFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ YKTVEAAK+A+ +P KTL G + KLA
Sbjct: 200 ALIIYKTVEAAKRALLEPIKTLDGIQMYCKLA 231
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
A D RK+++ GL + TTE L F + GE+EEG+V DK T +SRGFGFVT+K ++
Sbjct: 58 ADKDPGHRKIFVRGLGWDTTTETLKTVFSQFGEVEEGAVIMDKATGKSRGFGFVTFKHMD 117
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTH--KGKPPQ--TQLPAAVVPVPLPLGA 264
A++++ +P K + GR + +LA T + P Q +Q V VPL L A
Sbjct: 118 GAQRSLKEPSKRIDGRMTVCQLASTGALQVNPNQEVSQRKIYVGNVPLDLSA 169
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
RK++V + + +++ L A F +GEIEEG + +DK TG+SRG+ I YK +E+ + AL
Sbjct: 155 QRKIYVGNVPLDLSADRLLALFAGYGEIEEGPLGFDKFTGRSRGFALIIYKTVEAAKRAL 214
Query: 132 RAPSKLIDGRLAVCNLACE 150
P K +DG C LA E
Sbjct: 215 LEPIKTLDGIQMYCKLAAE 233
>gi|225453434|ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
Length = 561
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 264/536 (49%), Gaps = 29/536 (5%)
Query: 378 SLPFSNENVSKSPFVRKE-----AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIER 432
SLP N N+S P + AQ A+ +Y H TR+LPF+ AEH+ +NS + + I +
Sbjct: 22 SLP-KNSNLSHIPSKHRSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISK 80
Query: 433 FENQLD-VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYH 491
E L + RFLRYHPINEFE FFES+G+ E S FLP N F ++D +L
Sbjct: 81 VEFSLSSFAKSFERFLRYHPINEFEFFFESIGITQKEISGFLPPNKFFFAEDGRILNAAG 140
Query: 492 VLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLL-- 549
L +G NK+G + K +F D +L ++ GLS + + + P++L
Sbjct: 141 ALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAFPFVLGG 200
Query: 550 IGDVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGL 609
GD+ E + LK + ++ + +E+ W + R +RLF +LGC ++G L
Sbjct: 201 KGDLGVEAGALFDDLKRVFVD--FDLGSFVEENVDAWYEICRKIRLFYDLGCEKGKIGEL 258
Query: 610 IRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLF 669
+ + + E S + + + + + + + L+ P+I + + FL
Sbjct: 259 MGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGIGLLLLECPEILSFDLEAPVISVMGFLK 318
Query: 670 EIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNV----------GKKRLC-EYIQEN 718
+ + + + R + ++G + ++ L++ G RL Y+ +
Sbjct: 319 HFGLGLQKSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNYVLSH 378
Query: 719 PLELKKLALGSRVGRLPAEKERS---QLLRTKFLLDVGYVENSNEMAKALKHFRGRGAEL 775
P E L RVG + R+ + + FL +GY EN M K L+H G +EL
Sbjct: 379 PDE--DLDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENLLTM-KVLEHVHGTSSEL 435
Query: 776 QERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYF 835
QERF+CL++AGL+ +C MI S +ILN K ++++ K++FL+ +G L +L FP+Y
Sbjct: 436 QERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYL 495
Query: 836 NYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
+ + RIK R+ + WL + G + +++IA S K+F+ + HP P++W
Sbjct: 496 CFNLDNRIKPRYRCHVWLAENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLW 551
>gi|147841403|emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
Length = 545
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 260/536 (48%), Gaps = 45/536 (8%)
Query: 378 SLPFSNENVSKSPFVRKE-----AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIER 432
SLP N N+S P + AQ A+ +Y H TR+LPF+ AEH+ +NS + + I +
Sbjct: 22 SLP-KNSNLSHIPSKHRSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISK 80
Query: 433 FENQLD-VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYH 491
E L + RFLRYHPINEFE FFES+G+ E S FLP N F ++D +L
Sbjct: 81 VEFSLSSFAKSFERFLRYHPINEFEFFFESIGITQKEISGFLPPNKFFFAEDGRILNAAG 140
Query: 492 VLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLL-- 549
L +G NK+G + K +F D +L ++ GLS + + + P++L
Sbjct: 141 ALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAFPFVLGG 200
Query: 550 IGDVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGL 609
GD+ E + LK + ++ + +E+ W + R +RLF +LGC ++G L
Sbjct: 201 KGDLGVEAGALFDDLKRVFVB--FDLGSFVEENVDAWYEICRKIRLFYDLGCEKGKIGEL 258
Query: 610 IRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLF 669
+ + + E S + + + + + + + L+ P+I
Sbjct: 259 MGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGIGLLLLECPEI----------------L 302
Query: 670 EIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNV----------GKKRLC-EYIQEN 718
++ + + R + ++G + ++ L++ G RL Y+ +
Sbjct: 303 SFDLEAPKSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNYVLSH 362
Query: 719 PLELKKLALGSRVGRLPAEKERS---QLLRTKFLLDVGYVENSNEMAKALKHFRGRGAEL 775
P E L RVG + R+ + + FL +GY EN M K L+H G +EL
Sbjct: 363 PDE--DLDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENLLTM-KVLEHVHGTSSEL 419
Query: 776 QERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYF 835
QERF+CL++AGL+ +C MI S +ILN K ++++ K++FL+ +G L +L FP+Y
Sbjct: 420 QERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYL 479
Query: 836 NYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
+ + RIK R+ + WL + G + +++IA S K+F+ + HP P++W
Sbjct: 480 CFNLDNRIKPRYRXHVWLAENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLW 535
>gi|255541094|ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
gi|223548791|gb|EEF50280.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 253/518 (48%), Gaps = 25/518 (4%)
Query: 394 KEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQL-DVQRLIARFLRYHPI 452
+EAQ A+ +YLH TR+LPF AEH+SKNS + LI + + D R + +FLRYHPI
Sbjct: 34 REAQQALTDYLHSTRSLPFAYAEHISKNSLVSLSNLIANVDFSVSDFSRSVRKFLRYHPI 93
Query: 453 NEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEARE 512
NEFE F+ES+GL E FLP N F S+D L+ L ++G K+G + KE
Sbjct: 94 NEFEFFYESIGLDYNEVRNFLPSNKFFFSEDGSALDAACALASFGFPWYKLGTLYKEDSS 153
Query: 513 VFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIE-- 570
+F D +S+L ++ G S + + + + P++L GD+ E + LK I+
Sbjct: 154 IFSRDPLELKSRLSGFKECGFSNTSVIGICLAFPHVLSGDLGGEIDALFDDLKRAFIDFN 213
Query: 571 --SCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTM 628
SC ++ W + +R+F +LG + ++G +I + + + + +
Sbjct: 214 MGSC------VQGHVDAWYDICLKIRVFYDLGLNKGKVGDIIGKSKTIFIDCPIEVLIKK 267
Query: 629 IGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLL 688
+FG ++ ++ + LQ P++ L L V+E+ ++ + +
Sbjct: 268 TEYFCRFGVSKVDVGMLLLQKPELLCFDLETPLISVKGILEHFGFNVEELEVVIHKYPHV 327
Query: 689 VGSC-------TLKKTNTILAYLNVGK----KRLCEYIQENPLELKKLALGSRVGRLPAE 737
+G ++ + L + N K + L Y +P E + R+
Sbjct: 328 MGRNKMANLPHVMRAMDLHLWFFNKIKDGYHELLASYALRDPDEDLDKEFSDSLERIRVS 387
Query: 738 KERSQLL-RTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMI 796
+ + + + F+ +G+ EN+ + K L H G +ELQERFDCL+ G+ +C MI
Sbjct: 388 RTPTHTMSKLDFVHGIGFGENALTV-KVLTHLHGSSSELQERFDCLLRLGIGFSKLCTMI 446
Query: 797 RVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EERIKLRFLMYNWLKDE 855
R P+ILN + ++++ K++FL +G L L FP++ + E RIK R+ + WL ++
Sbjct: 447 RTMPKILNQQSEILEQKVNFLCQEMGSSLQELYIFPAFLCFNLENRIKPRYRFHMWLTEK 506
Query: 856 GWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVWQTF 893
G + S+++A S K F+ + HP P+ W F
Sbjct: 507 GVSTQTYSISSIVATSEKNFVARLYGIHPAVPKHWFEF 544
>gi|15232313|ref|NP_191599.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|7287988|emb|CAB81826.1| putative protein [Arabidopsis thaliana]
gi|332646534|gb|AEE80055.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 558
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 257/519 (49%), Gaps = 33/519 (6%)
Query: 395 EAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQL-DVQRLIARFLRYHPIN 453
+AQ A+ +YLH TR+L + AE ++ N+ + LI + + + + + + L YHPIN
Sbjct: 36 KAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPIN 95
Query: 454 EFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREV 513
EFE FFES+G+ E S FLP F S+D +L+ L +G NK+GK+ KE R V
Sbjct: 96 EFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLV 155
Query: 514 FQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIG------DVNTEFVEVLQILKSM 567
F G +S+L ++ +G S + + P L G ++ FV++ ++
Sbjct: 156 FVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFDEF 215
Query: 568 EIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALT 627
+ HL E+ +W + R +R+F +LGC +E++ L+ ++ L E S +
Sbjct: 216 D------SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMN 269
Query: 628 MIGLLLKFGSTRNELCSIFLQFPQI---EVRKFLLNLNQCLLFLFEIKMKVDEIGKILRC 684
G +FG ++ + + L+ P I ++ K ++++ L ++ DE+ + +
Sbjct: 270 KAGYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLK---HFGLRQDEVDAVAQK 326
Query: 685 HFLLVGSCTLKKTNTILAYLNVGKK-----------RLCEYIQENPLELKKLALGSRVGR 733
+ + G LK +L +++ ++ L Y +P E + +
Sbjct: 327 YPYVFGRNQLKNLPYVLRAIDLHERIFDILKNGNHHLLASYTLMDPDEDLEREYQEGLEE 386
Query: 734 LPAEK-ERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDV 792
L + +R + + FL ++G+ EN M K L+H G EL +RF L+N+G+ +
Sbjct: 387 LQNSRTKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKI 445
Query: 793 CEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EERIKLRFLMYNW 851
C +IR +P+ILN K I+ K+ FL +G L +L FP+Y + E RI RF + W
Sbjct: 446 CMLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKW 505
Query: 852 LKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
L ++G+ + + ++++A S K F+ + HP P+ W
Sbjct: 506 LVEKGFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544
>gi|224286903|gb|ACN41154.1| unknown [Picea sitchensis]
Length = 446
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 159/252 (63%), Gaps = 11/252 (4%)
Query: 4 VKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIK 63
KKRK+E++ ++ + + R +L+P ++ QL+D+L +++ + E+++
Sbjct: 5 AKKRKVEENGVV----------DITVEDTRKMLEPFTREQLLDILQEAATKHLGVLEQVR 54
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S+A DP RKLFVRGL W+T +E+L A F GE+EEG VI DK TGKS+GYGF+T+KH
Sbjct: 55 SIADKDPAQRKLFVRGLGWDTNTESLKALFSQFGELEEGVVIMDKNTGKSKGYGFVTFKH 114
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
M+ +AL+ PSK IDGR+ V LA G D++ RK+Y+G + ++ + LL+
Sbjct: 115 MDGALNALKEPSKKIDGRMTVSQLASAGSQPAQPAADVSARKIYVGNVPMDMAADRLLSL 174
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTH 242
F ++GEIEEG + +DK + +SRGF +K+V+A K+A+++P KT+ G + KLA +
Sbjct: 175 FSQYGEIEEGPLGFDKQSGKSRGFALFIFKSVDATKRALEEPMKTIDGHQMFCKLAVEGQ 234
Query: 243 KGKPPQTQLPAA 254
K KP +P
Sbjct: 235 KPKPGGMSVPGG 246
>gi|116787988|gb|ABK24718.1| unknown [Picea sitchensis]
gi|148910800|gb|ABR18466.1| unknown [Picea sitchensis]
Length = 442
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P +K QL+D++S + P + E I+ +A DP HRK+FVRGL W TTSE L +
Sbjct: 50 MKKLLEPFNKEQLMDIISEHAKKDPQLLESIRKLADKDPAHRKIFVRGLGWETTSEALKS 109
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F +GE+EE VI DK TGKS+GYGF+T+KHM Q AL+ PSK ID R+ C +A G
Sbjct: 110 VFSQYGELEECTVITDKGTGKSKGYGFVTFKHMVGAQKALKDPSKKIDSRMTACQMASAG 169
Query: 152 LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVT 211
+ + RK+Y+ +S ++ E LLNFF ++GE+EEG + +DK T SRGF
Sbjct: 170 PAPAHPPVEATGRKIYVSNVSADIPAEKLLNFFSKYGEVEEGPLGFDKHTGRSRGFALFV 229
Query: 212 YKTVEAAKKAVDDPHKTLGGRTIIVK-LADTHKGKPPQTQLPAAVVPVPLPL--GAG 265
YK E AKKA+++P+K + G ++ K A+ +K + T ++ P L L GAG
Sbjct: 230 YKNAEGAKKALEEPNKIVEGHSMNCKRAAEGNKHRNAHTPSTGSLDPNDLALTHGAG 286
>gi|297817338|ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
lyrata]
gi|297322390|gb|EFH52811.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
lyrata]
Length = 560
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 258/515 (50%), Gaps = 25/515 (4%)
Query: 395 EAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQL-DVQRLIARFLRYHPIN 453
+AQ A+ +YLH TR+L + AE ++ N+ + LI + + + + + + L YHPIN
Sbjct: 36 KAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPIN 95
Query: 454 EFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREV 513
EFE FFES+G+ E FLP F S+D +L+ L +G NK+GK+ KE R V
Sbjct: 96 EFEFFFESIGIDYSEVCEFLPEKKFFFSEDRTVLDAACALSGFGFPWNKLGKLYKEERLV 155
Query: 514 FQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLI--GDVNTEFVEVLQILKSMEIES 571
F G S+L ++ LG S + + P+ L G++ +E + + LK + E
Sbjct: 156 FVQSPGEIDSRLLKFKDLGFSTVAVIGTCLAFPHALCGGGELGSEILCLFVKLKRLFDE- 214
Query: 572 CWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGL 631
+ +HL E+ +W + R +R+F +LGC +E++ L+ ++ L E S +
Sbjct: 215 -FDSQHLCEENVDSWLAVSRKIRVFYDLGCENEEMWELMGRNKSLFLEYSEEALVKKAEY 273
Query: 632 LLKFGSTRNELCSIFLQFPQI---EVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLL 688
+FG + ++ + L+ P I ++ K ++++ L ++ DE+ + + + +
Sbjct: 274 FCRFGVRKEDVALLILRNPAIMNFDLEKPVISVTGMLK---HFGLRQDEVDAVAQKYPYV 330
Query: 689 VGSCTLKKTNTILAYLNVGKK-----------RLCEYIQENPLELKKLALGSRVGRLPAE 737
+G LK +L +++ ++ L Y +P E + L
Sbjct: 331 LGRNKLKNLPYVLRAIDLHERIVDILKNGSHHLLASYSVMDPYEDLDREYQEGLEELQNS 390
Query: 738 KERSQ-LLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMI 796
+ ++ + + FL ++G+ EN M K L+H G ELQ+RF L+++G+ +C +I
Sbjct: 391 RTKTHNIQKLDFLHEIGFGENGMTM-KVLQHVHGTAVELQDRFQILLDSGIIFSKICLLI 449
Query: 797 RVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EERIKLRFLMYNWLKDE 855
R +P+ILN K I+ K+ FL +G L +L FP+Y + E RI RF + WL ++
Sbjct: 450 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLDVFPAYLCFDLENRISPRFRFHKWLVEK 509
Query: 856 GWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
G + + ++++A S K F+ + HP P+ W
Sbjct: 510 GLSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544
>gi|357475705|ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
truncatula]
gi|355509193|gb|AES90335.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
truncatula]
Length = 401
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 159/262 (60%), Gaps = 20/262 (7%)
Query: 3 DVKKRKMEDDNILINGQDFNSSSSS----------SQDHLRSLLDPLSKSQLVDLLSRLG 52
+ KKRK E++ D NS SS + D +R +L P ++ QL+DLL
Sbjct: 2 EFKKRKTEENG------DANSPPSSIDAAVIPPALTSDDIRKILQPFTQEQLLDLLQSAS 55
Query: 53 SQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGK 112
Q+P I + ++SVA D RKLFVRGL+ TT+ETL F +G+++E VI+DKATG+
Sbjct: 56 LQHPDILDAVRSVADRDTTRRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGR 115
Query: 113 SRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLS 172
S+GYGF+ Y+H++ AL+ PSK IDGR+ V LA G +G D++ RK+++G +
Sbjct: 116 SKGYGFVVYRHVDGAVLALKEPSKKIDGRMTVTQLAAAGSTGG----DVSSRKVFVGNVP 171
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGR 232
EV+ E LL+ F ++GEIEEG + +DK + ++RGF F YKT E AK +V + KT+ G
Sbjct: 172 FEVSAESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAESMKTVDGH 231
Query: 233 TIIVKLADTHKGKPPQTQLPAA 254
+I K A +K P Q P+
Sbjct: 232 QVICKFAVDNKKPKPVGQNPSG 253
>gi|225461628|ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein VITISV_017556 [Vitis vinifera]
Length = 449
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/321 (38%), Positives = 178/321 (55%), Gaps = 45/321 (14%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
M+ KKRKM D+N L++ D +S + + + R +++P QL+++L ++ + +
Sbjct: 1 MDATKKRKM-DENGLVS-TDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLD 58
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
I+S+A D RKLF+RGL W+TT+E L F +GE+EE VI DK T KS+GYGF+T
Sbjct: 59 AIRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVT 118
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSG----VSAVPDLAQRKLYIGGLSPEVT 176
+KH++ AL+ PSK IDGR+ V LA GLSG SAV D++ RK+Y+ + ++
Sbjct: 119 FKHVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAV-DVSMRKIYVANVPVDMP 177
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ LL F +GEIEEG + +DK T +SRGF YKT EAA+ A+ DP K + GR ++
Sbjct: 178 ADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVC 237
Query: 237 KLA-DTHKGK-----------------------PPQTQLPAAVVPVPLPLGAGYPQA--- 269
KLA + KGK PPQ +P + LG+ YP
Sbjct: 238 KLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGVPPQGSMPGS-------LGSQYPGGPGG 290
Query: 270 ----GKAHANTPPVGYSYPQN 286
G PP+G+ +P N
Sbjct: 291 ISAYGGFSGGPPPLGHHHPLN 311
>gi|224076982|ref|XP_002305079.1| predicted protein [Populus trichocarpa]
gi|222848043|gb|EEE85590.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 156/245 (63%), Gaps = 6/245 (2%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS--SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSI 58
ME +KKRK E++ I I S + + + +R +L+P +K QL+D+L + I
Sbjct: 1 MEFIKKRKAEENGISIPTGTSPPSPITPLTPEEIRKILEPFTKDQLLDILQSATLHHSDI 60
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
++SVA D RKLF+RGL+ TTS+TL F GE+EE VI+DK TGKS+G+GF
Sbjct: 61 LNSVRSVADGDISLRKLFIRGLSSETTSDTLRILFSSFGELEEAIVIHDKNTGKSKGFGF 120
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTE 178
IT+KH++S ++R PSK IDGR+ V LA S S+ D++ RK+Y+G + E+T+E
Sbjct: 121 ITFKHVDSAMLSIREPSKKIDGRITVTQLA----SNNSSTGDVSLRKVYVGNVPFEITSE 176
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL 238
LL FF +GEIEEG + +DK T +S+GF F+ YK+ + AK A+ DP K + G ++ KL
Sbjct: 177 RLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKSEDGAKAAIADPMKNIDGHQVVCKL 236
Query: 239 ADTHK 243
A +K
Sbjct: 237 AVDNK 241
>gi|302804260|ref|XP_002983882.1| hypothetical protein SELMODRAFT_27842 [Selaginella moellendorffii]
gi|300148234|gb|EFJ14894.1| hypothetical protein SELMODRAFT_27842 [Selaginella moellendorffii]
Length = 146
Score = 197 bits (502), Expect = 2e-47, Method: Composition-based stats.
Identities = 100/157 (63%), Positives = 119/157 (75%), Gaps = 14/157 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFVRGLAW TTS+ L AF+ +GEIEEGAVI DKATGKSRG+GFIT+KHM+S Q AL+
Sbjct: 1 KLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKE 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
PSK ID S D AQRKLYIGGLS E + E LLN F ++GEIEEG
Sbjct: 61 PSKTID-------------VSESRSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEG 107
Query: 194 SVAYDKDTNES-RGFGFVTYKTVEAAKKAVDDPHKTL 229
+VAYDK+TN+S RGF F+TYK+VEAA+KA+DDP+KT+
Sbjct: 108 AVAYDKNTNKSRRGFAFITYKSVEAARKAIDDPNKTI 144
Score = 82.4 bits (202), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS-R 114
PS ++ SAD RKL++ GL++ T++ETL F +GEIEEGAV YDK T KS R
Sbjct: 61 PSKTIDVSESRSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDKNTNKSRR 120
Query: 115 GYGFITYKHMESTQSALRAPSKLID 139
G+ FITYK +E+ + A+ P+K I+
Sbjct: 121 GFAFITYKSVEAARKAIDDPNKTIE 145
>gi|224061320|ref|XP_002300424.1| predicted protein [Populus trichocarpa]
gi|222847682|gb|EEE85229.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 151/248 (60%), Gaps = 9/248 (3%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
M+ KKRK+E++ I+ + D +S + R +++ + QL+D+L ++P I E
Sbjct: 1 MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILE 60
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
++S+A D RKLF+RGL W TT+E L F +GE+EE VI DK TGKS+GYGF+
Sbjct: 61 AVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVI 120
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVS---------AVPDLAQRKLYIGGL 171
YKH++ AL+ PSK IDGR+ V LA G SG + V D+A RK+Y+ +
Sbjct: 121 YKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANV 180
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
E+ ++ LLN F ++GEIEEG + +DK T +S+GF YKT E A+ A+ +P K + G
Sbjct: 181 PYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEG 240
Query: 232 RTIIVKLA 239
R + KLA
Sbjct: 241 RQLNCKLA 248
>gi|224114692|ref|XP_002316830.1| predicted protein [Populus trichocarpa]
gi|222859895|gb|EEE97442.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 173/302 (57%), Gaps = 30/302 (9%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQ-------DHLRSLLDPLSKSQLVDLLSRLGS 53
M+ +KKRK ++ NG + ++ S + +R +++P +K QL+D+L
Sbjct: 1 MDFIKKRKADE-----NGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATL 55
Query: 54 QYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS 113
+ + ++SVA D RKLF+RGL+ TTSETL F GE+EE VI+DK TGKS
Sbjct: 56 HHSDVLNSVRSVADGDISLRKLFIRGLSSETTSETLRILFSSSGELEEAIVIHDKNTGKS 115
Query: 114 RGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSP 173
+G+GFIT+KH+++ ++R PSK IDGR+ V LA S S+ D++ RK+Y+G +
Sbjct: 116 KGFGFITFKHVDAAMLSIREPSKKIDGRITVTQLA----SNNSSTTDVSLRKVYVGNVPF 171
Query: 174 EVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRT 233
EV++E LL FF +GEIEEG + +DK T +S+GF F+ YK E AK A+ DP K + G
Sbjct: 172 EVSSERLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKNEEGAKAAIADPMKNIDGHQ 231
Query: 234 IIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPPYPTS 293
++ K A ++ +Q+ A+ PL YP P G S QN P T+
Sbjct: 232 VVCKFAADNRKVNKNSQV-GAITQTSQPL--TYP---------PLTGNS--QNYGPASTN 277
Query: 294 SY 295
SY
Sbjct: 278 SY 279
>gi|356545259|ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 437
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 156/248 (62%), Gaps = 5/248 (2%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
M+ KKRK+ D+N IN D + S R L++ + QL+D+L +++P +
Sbjct: 1 MDPTKKRKL-DENGFIN-NDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLA 58
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+++V+ D RKLF+RGL W+TT++ L + F +G++EE VI DKATGKS+GYGF+T
Sbjct: 59 AVRAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVT 118
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSA-VPDLAQRKLYIGGLSPEVTTEV 179
++H++ ALR PSK IDGR+ V LA G S ++A D+A RK+Y+ + P++ +
Sbjct: 119 FRHVDGALLALREPSKRIDGRVTVTQLAAAGNSALNANAVDVALRKIYVANVPPDLPADK 178
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
LL F +GEIEEG + +DK T +S+GF YK+ E AK A+ DP KT+ GR + KLA
Sbjct: 179 LLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLSCKLA 238
Query: 240 --DTHKGK 245
D +GK
Sbjct: 239 ITDGKQGK 246
>gi|356517062|ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 425
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 155/251 (61%), Gaps = 11/251 (4%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS---SQDHLRSLLDPLSKSQLVDLLSRLGSQYPS 57
M+ KKRK+++ NG + N SS S +R L++ + QL+D+L +++
Sbjct: 1 MDPTKKRKLDE-----NGFNNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLD 55
Query: 58 IAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYG 117
+ +++VA D RKLF+RGL W+TT++ L + F G++EE VI DKATGKS+GYG
Sbjct: 56 VLAAVRAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYG 115
Query: 118 FITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVP-DLAQRKLYIGGLSPEVT 176
F+T++H++ ALR PSK IDGR+ V LA G S + P D+A RK+Y+ + P++
Sbjct: 116 FVTFRHVDGALLALREPSKRIDGRVTVTQLAAAGNSASNVNPADVALRKIYVANVPPDLP 175
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ LL F +GEIEEG + +DK T +S+GF YK+ E A+ A+ DP KT+ GR +
Sbjct: 176 ADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSC 235
Query: 237 KLA--DTHKGK 245
KLA D +GK
Sbjct: 236 KLAITDGKQGK 246
>gi|225436055|ref|XP_002276040.1| PREDICTED: uncharacterized protein LOC100263294 [Vitis vinifera]
Length = 457
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 2/208 (0%)
Query: 24 SSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWN 83
S +S ++ +R LL P K Q++ LL P+ +I +DPVHRK+FV GL W+
Sbjct: 77 SEASKRETIRKLLQPFGKDQIIALLKEAADSNPATLSKILPAVESDPVHRKIFVHGLGWD 136
Query: 84 TTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLA 143
T+ETL +AF+ +G+IEE V+ DK TG+S+GYGF+ +K + AL+ P K I R+A
Sbjct: 137 ATNETLTSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQPQKKIGNRMA 196
Query: 144 VCNLACEGLSGV--SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDT 201
C+LA G SG +A D+ +R+LY+G + P+++ E L FF + GEIE+G + +DK T
Sbjct: 197 ACHLAAAGPSGSNPAAGADVNERRLYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKAT 256
Query: 202 NESRGFGFVTYKTVEAAKKAVDDPHKTL 229
+ RGF + +KT E K+A+++P KT
Sbjct: 257 GKFRGFAIIVFKTAEGMKRALEEPIKTF 284
>gi|293332727|ref|NP_001168409.1| uncharacterized protein LOC100382178 [Zea mays]
gi|223948081|gb|ACN28124.1| unknown [Zea mays]
gi|413950595|gb|AFW83244.1| hypothetical protein ZEAMMB73_012333 [Zea mays]
Length = 448
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 156/264 (59%), Gaps = 15/264 (5%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSS---SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPS 57
M+ K++ DDN + +++ + +D LR LL+PLS+ QL D+ +
Sbjct: 1 MDPFSKKRKPDDNGAVTASPAGGAATLGLTREDVLR-LLEPLSRDQLADIAAAAALVSAH 59
Query: 58 IAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYG 117
+ +++ A DP RKLF+RGL W TTS++L A F +G++EE VI DK+TG+S+GYG
Sbjct: 60 ALDAVRAAADRDPALRKLFIRGLGWETTSDSLRAIFSAYGDLEEAVVITDKSTGRSKGYG 119
Query: 118 FITYKHMESTQSALRAPSKLIDGRLAVCNLACEGL----------SGVSAVPDLAQRKLY 167
F+T++H +S AL+ PSK IDGR+ V LA G SG + V D++ RK++
Sbjct: 120 FVTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPSVGAPGSGGAPVADVSLRKIF 179
Query: 168 IGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
+G + ++++E LL F +GEIEEG + +DK T + RGF YKT E A+ ++ D K
Sbjct: 180 VGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVK 239
Query: 228 TLGGRTIIVKLA-DTHKGKPPQTQ 250
+ ++ KLA D KGK Q+Q
Sbjct: 240 VIDSHQLVCKLAIDGKKGKQGQSQ 263
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D A RKL+I GL E T++ L F +G++EE V DK T S+G+GFVT++ ++A
Sbjct: 71 DPALRKLFIRGLGWETTSDSLRAIFSAYGDLEEAVVITDKSTGRSKGYGFVTFRHADSAV 130
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAA 254
A+ +P K + GR + +LA P P +
Sbjct: 131 LALKEPSKKIDGRMTVTQLAAAGSAGGPSVGAPGS 165
>gi|296083995|emb|CBI24383.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 129/203 (63%), Gaps = 2/203 (0%)
Query: 29 QDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSET 88
++ +R LL P K Q++ LL P+ +I +DPVHRK+FV GL W+ T+ET
Sbjct: 168 RETIRKLLQPFGKDQIIALLKEAADSNPATLSKILPAVESDPVHRKIFVHGLGWDATNET 227
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
L +AF+ +G+IEE V+ DK TG+S+GYGF+ +K + AL+ P K I R+A C+LA
Sbjct: 228 LTSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQPQKKIGNRMAACHLA 287
Query: 149 CEGLSGV--SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
G SG +A D+ +R+LY+G + P+++ E L FF + GEIE+G + +DK T + RG
Sbjct: 288 AAGPSGSNPAAGADVNERRLYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRG 347
Query: 207 FGFVTYKTVEAAKKAVDDPHKTL 229
F + +KT E K+A+++P KT
Sbjct: 348 FAIIVFKTAEGMKRALEEPIKTF 370
>gi|356521446|ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
Length = 384
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQ----------DHLRSLLDPLSKSQLVDLLSR 50
ME KKRK E++ + S+ S + +R +L P S+ QL+DLL
Sbjct: 1 MEFTKKRKTEENGDTTDYPPQQSTEESPIAAAAPAPLAAEDIRKILQPFSQEQLLDLLQS 60
Query: 51 LGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKAT 110
++P + + +++VA D RKLFVRGLA TT+ETL F GE++E VI DKAT
Sbjct: 61 ASLRHPDVLDAVRAVADLDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKAT 120
Query: 111 GKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGG 170
G+S+GYGF+ + H++ AL+ PSK IDGR+ V LA +G D++ RK+++G
Sbjct: 121 GRSKGYGFVVFSHVDGAILALKEPSKKIDGRMTVTQLAA---AGGPGGGDVSLRKVFVGN 177
Query: 171 LSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
+ E+++E LL+ F + GE+EEG + +DK + +SRGF F YKT E A+ ++ +P KT+
Sbjct: 178 VPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKTIE 237
Query: 231 GRTIIVKLA-DTHKGKP 246
G +I KLA D K KP
Sbjct: 238 GHQVICKLAVDNKKTKP 254
>gi|449438887|ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED: uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 152/243 (62%), Gaps = 8/243 (3%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS--SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSI 58
M+ KKR+M++ NG D + SS S + + R ++D + QL+D+L S++ +
Sbjct: 1 MDVTKKRRMDE-----NGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDV 55
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
+ ++S+A D RKLF+RGL+ +T++E L + F +GE+EE VI DKATGKS+GYGF
Sbjct: 56 LDAVRSIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGF 115
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGV-SAVPDLAQRKLYIGGLSPEVTT 177
+T+KH++ AL+ PSK IDGR+ V LA G+SG S DL+ RK+Y+ + ++
Sbjct: 116 VTFKHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPA 175
Query: 178 EVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVK 237
+ LL F +GEIEEG + +DK T + RG+ YK E A+ A+ DP KT+ GR + K
Sbjct: 176 DKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCK 235
Query: 238 LAD 240
A+
Sbjct: 236 FAN 238
>gi|297853100|ref|XP_002894431.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp.
lyrata]
gi|297340273|gb|EFH70690.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 155/253 (61%), Gaps = 7/253 (2%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSS---QDHLRSLLDPLSKSQLVDLLSRLGSQYPS 57
M+ +KKRK++++ I + N S SS QD R +++ S QL+D+L ++
Sbjct: 1 MDMLKKRKLDENGIGMLNDGINGSVSSRLMPQD-ARKIIERFSTDQLLDILQEAVVRHTD 59
Query: 58 IAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYG 117
+ E ++ A +D RKLF+RGLA TT+E L + F +G+++E VI DK T KS+GYG
Sbjct: 60 VLEIVRLTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLDEAIVILDKVTAKSKGYG 119
Query: 118 FITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGV--SAVPDLAQRKLYIGGLSPEV 175
F+T+KH++ AL+ PSK IDGR+ V LA G G S V D++ RK+Y+ + ++
Sbjct: 120 FVTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGTTNSHVSDISMRKIYVANVPFDM 179
Query: 176 TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTII 235
+ LLN F +G+IEEG + +DK T +SRGF YKT E A+ A+ +P K + G+ +
Sbjct: 180 PADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQ 239
Query: 236 VKLA-DTHKGKPP 247
KLA D KGKPP
Sbjct: 240 CKLAIDGKKGKPP 252
>gi|148910248|gb|ABR18205.1| unknown [Picea sitchensis]
Length = 382
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 148/243 (60%), Gaps = 15/243 (6%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
+++ +L++ SK +L ++L ++ I E+ +VAS D RKLFVRGL W+T E
Sbjct: 110 TKEDAETLMETFSKDELAEILKLALKKHGDIVSEVANVASKDSAKRKLFVRGLGWHTKPE 169
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNL 147
TL + F +GE+E+ ++ D+ +GKS+G+GF+T+K +AL+ PSK ID R+ VCNL
Sbjct: 170 TLNSVFSAYGEVEKADIVMDRNSGKSKGFGFVTFKSFAGVVAALKEPSKKIDDRMTVCNL 229
Query: 148 ACEGLSGVSAVPDLAQ---RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNES 204
+ +GVSA PD Q RK+Y+GGL +V + L+ F ++GEIEEG + +DK T +S
Sbjct: 230 S----TGVSA-PDSQQVHGRKIYVGGLPNDVDSAKLVKLFSQYGEIEEGPLGFDKKTGKS 284
Query: 205 RGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGA 264
+GF F YK+ ++A A+D+P KT G T+ KLA PP+ +P +P
Sbjct: 285 KGFAFFIYKSEKSANNALDEPMKTFDGATLTCKLA------PPKNTKNKNGIPS-VPSKN 337
Query: 265 GYP 267
G P
Sbjct: 338 GTP 340
>gi|255563118|ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538254|gb|EEF39863.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 398
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 29 QDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSET 88
QD +R +++P +K QL+++L +++ + E ++++A +D RKLF+RGL+ TT+ET
Sbjct: 32 QD-IRKIIEPFTKEQLLEILQNAATRHADVLESVRTLADSDISLRKLFIRGLSSETTTET 90
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+ F +GE+EE VI+DK TGKS+G+GFIT+KH++ AL+ PSK IDGR+ V LA
Sbjct: 91 IRNLFNNYGELEEAIVIFDKNTGKSKGFGFITFKHVDGALIALKEPSKKIDGRMTVTQLA 150
Query: 149 CE-----GLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
++ D++ RK+Y+G + + +E LL FF +GE+EEG + +DK T +
Sbjct: 151 SAGLSNSSINSSGGGSDVSARKIYVGNVPYNIPSERLLGFFLNYGEVEEGPLGFDKSTGK 210
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
S+GF F+ YKT E AK A+ DP K + G ++ K+A
Sbjct: 211 SKGFAFIIYKTEEGAKAAIADPVKMIDGHQVVCKMA 246
>gi|357507879|ref|XP_003624228.1| hypothetical protein MTR_7g080620 [Medicago truncatula]
gi|355499243|gb|AES80446.1| hypothetical protein MTR_7g080620 [Medicago truncatula]
Length = 737
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 145/569 (25%), Positives = 267/569 (46%), Gaps = 56/569 (9%)
Query: 361 LPTGSFYFAQTPRLFSKSLPFSNENVSKSPFVRK-----EAQAAMLEYLHLTRNLPFMDA 415
L T F R FS + + N+SK P + EAQ A+ +YLH T+++PF A
Sbjct: 21 LKTNRAMFFFLHRHFSTTTKTNFPNLSKIPIKHRNHVIYEAQKALTDYLHNTKSIPFTYA 80
Query: 416 EHMSKNSPHFVEKLIER-------FENQLDVQRLIARFLRYHPINEFEPFFESLGLKPCE 468
EH+ N+ + LI + F N I R +R+HPINEFE FFES+G+
Sbjct: 81 EHIGNNTFCSLTNLISKVNFSPPTFSNN------IKRVIRFHPINEFEVFFESIGIDYTL 134
Query: 469 YSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAY 528
S LP + +F S+D LLE VLC++G K+G + E +F V + +L +
Sbjct: 135 VSDLLPNDKLFFSEDRTLLEAACVLCDFGFPWEKLGVLYMEKSSIFGKSVEELKLRLCWF 194
Query: 529 EMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSM--------EIESCWIEEHL-- 578
+ G + + + P++L +V+ QI K + +++ +++ L
Sbjct: 195 KRFGFGNVEVIGICLAFPFVLSEEVD-------QIQKGVFGIDGLFSDLKLIFLDNSLGS 247
Query: 579 -LEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGS 637
+E +W + R LR+F +L +G L+ ++ + + + + L +FG
Sbjct: 248 YVEGNVDSWYEVCRKLRMFFDLSGWKGNVGELMGKNKSIFVDHKEDEIVHRVEYLCRFGG 307
Query: 638 TRNELCSIFLQFPQI---EVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTL 694
+ E+ + LQ P++ ++ K ++N+ L L M ++ ++ ++G+ +
Sbjct: 308 KKEEVALLILQCPEVLKLDLEKTVINV---LELLKHFGMSSKDLEDVIENFGHVLGTIRM 364
Query: 695 KKTNTILAYLNVGK-----------KRLCEYIQENPLELKKLALGSRVGRLPAEKERSQL 743
++ + + + + L +YI + E + + R+ + R
Sbjct: 365 VNLPNVMRAMGLQEWFCDKLKGGHHQLLADYIASDRNEDRDKVYQDGLRRIHISRARVHS 424
Query: 744 L-RTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQI 802
+ + FL +G+ EN+ M L G +ELQERFDCL+ + ++ +C M+R +P+I
Sbjct: 425 INKLNFLHRLGFGENALTM-NLLDCLHGTSSELQERFDCLLRSRIEFSKLCMMVRKTPRI 483
Query: 803 LNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNY-TEERIKLRFLMYNWLKDEGWIDGR 861
LN ++I+ K+ F +G L +L +FP+ +Y ++RI R+ + WL + G +
Sbjct: 484 LNQNYEIIEQKVIFFNQKMGTTLDYLETFPAMLHYHLDDRIIPRYRFHTWLTERGLSYRK 543
Query: 862 LASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
+ ++I S K F+ + HP P+ W
Sbjct: 544 YSVQSMITDSEKKFVARVFKIHPAAPKHW 572
>gi|356502762|ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
Length = 384
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 143/218 (65%), Gaps = 4/218 (1%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
+ +R +L P S+ QL+DLL ++P + + +++VA D RKLFVRGLA TT+ETL
Sbjct: 44 EDIRKILQPFSQEQLLDLLQSASLRHPDVLDAVRAVADCDSTLRKLFVRGLAGETTTETL 103
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
+ F GE++E VI DKATG+S+GYGF+ ++H++ AL+ PSK IDGR+ V LA
Sbjct: 104 RSVFSGFGELDEAIVIMDKATGRSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAA 163
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
G G D++ RK+++G + E+++E LL+ F + GE+EEG + +DK + +SRGF F
Sbjct: 164 AGGPGGG---DVSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAF 220
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTHKGKP 246
YKT E A+ ++ +P KT+ G +I KLA D K KP
Sbjct: 221 FVYKTEEGARASLVEPLKTIEGHQVICKLAVDNKKTKP 258
>gi|225439119|ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243393 [Vitis vinifera]
Length = 463
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 19/236 (8%)
Query: 23 SSSSSSQDH------LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLF 76
S+S+S+ D ++ +L+P SK QL++LL ++ +AE ++ VA DPVHRK+F
Sbjct: 62 SASTSAVDDDDDEEPIQKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIF 121
Query: 77 VRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSK 136
V GL W+T +ETL + F+ +GEIE+ + DK +GKS+GYGFI +K + AL+ P K
Sbjct: 122 VHGLGWDTNAETLISVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQK 181
Query: 137 LIDGRLAVCNLACEG-------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
I R+ C LA G +S +V + QRK+Y+ + E+ + LL F
Sbjct: 182 KIGNRMTACQLASIGPVPSPAVGQAAMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVF 241
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F ++GEIEEG + DK T + +GF YKT E AKKA+D+PHK G + + A
Sbjct: 242 FSKYGEIEEGPLGLDKQTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKA 297
>gi|147807511|emb|CAN72884.1| hypothetical protein VITISV_028589 [Vitis vinifera]
Length = 463
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 19/236 (8%)
Query: 23 SSSSSSQDH------LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLF 76
S+S+S+ D ++ +L+P SK QL++LL ++ +AE ++ VA DPVHRK+F
Sbjct: 62 SASTSAVDDDDDEEPIQKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIF 121
Query: 77 VRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSK 136
V GL W+T +ETL + F+ +GEIE+ + DK +GKS+GYGFI +K + AL+ P K
Sbjct: 122 VHGLGWDTNAETLISVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQK 181
Query: 137 LIDGRLAVCNLACEG-------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
I R+ C LA G +S +V + QRK+Y+ + E+ + LL F
Sbjct: 182 KIGNRMTACQLASIGPVPSPAVGQAAMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVF 241
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F ++GEIEEG + DK T + +GF YKT E AKKA+D+PHK G + + A
Sbjct: 242 FSKYGEIEEGPLGLDKQTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKA 297
>gi|116779627|gb|ABK21372.1| unknown [Picea sitchensis]
Length = 265
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 148/256 (57%), Gaps = 15/256 (5%)
Query: 36 LDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRV 95
++ SK +L ++L ++ I E+ +VAS D RKLFVRGL W+T ETL + F
Sbjct: 1 METFSKDELAEILKLALKKHGDIVSEVANVASKDSAKRKLFVRGLGWHTKPETLNSVFSA 60
Query: 96 HGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGV 155
+GE+E+ ++ D+ +GKS+G+GF+T+K +AL+ PSK ID R+ VCNL+ +GV
Sbjct: 61 YGEVEKADIVMDRNSGKSKGFGFVTFKSFAGVVAALKEPSKKIDDRMTVCNLS----TGV 116
Query: 156 SAVPDLAQ---RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTY 212
SA PD Q RK+Y+GGL +V + L+ F ++GEIEEG + +DK T +S+GF F Y
Sbjct: 117 SA-PDSQQVHGRKIYVGGLPNDVDSAKLVKLFSQYGEIEEGPLGFDKKTGKSKGFAFFIY 175
Query: 213 KTVEAAKKAVDDPHKTLGGRTIIVKLA----DTHKGKPPQTQLPAAVVPVPLPLGAGYPQ 268
K+ ++A A+D+P KT G T+ KLA +K P +P P P
Sbjct: 176 KSEKSANNALDEPMKTFDGATLTCKLAPPKNTKNKNGIPSVPSKNGTPSIPTP---AQPL 232
Query: 269 AGKAHANTPPVGYSYP 284
G A + P+G P
Sbjct: 233 EGNMWAYSSPLGGFIP 248
>gi|296083996|emb|CBI24384.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 128/210 (60%), Gaps = 5/210 (2%)
Query: 35 LLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR 94
LL+P SK QL+ LL +YP + ++ +A ADP HRK+FV GL W+TT+ETL + F
Sbjct: 134 LLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVFG 193
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG--- 151
+GEIE+ + DK +GKS+GY FI +KH + AL+ P K I R+ C LA G
Sbjct: 194 KYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVP 253
Query: 152 --LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
V V + QRK+++ +S E+ + LL FF + GEIEEG + DK T + +GF
Sbjct: 254 APPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFAL 313
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
YK++E++++A+++PHK G T+ + A
Sbjct: 314 FVYKSIESSRRALEEPHKIFEGHTLHCQKA 343
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK+FV ++ + L F GEIEEG + DK+TGK +G+ YK +ES++ A
Sbjct: 266 TQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRA 325
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K+ +G C A +G
Sbjct: 326 LEEPHKIFEGHTLHCQKAIDG 346
>gi|359479205|ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
vinifera]
gi|359479207|ref|XP_003632234.1| PREDICTED: uncharacterized protein LOC100258161 isoform 2 [Vitis
vinifera]
gi|147853236|emb|CAN80681.1| hypothetical protein VITISV_037734 [Vitis vinifera]
Length = 478
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 5/213 (2%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+P SK QL+ LL +YP + ++ +A ADP HRK+FV GL W+TT+ETL +
Sbjct: 116 IEKLLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTS 175
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F +GEIE+ + DK +GKS+GY FI +KH + AL+ P K I R+ C LA G
Sbjct: 176 VFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAG 235
Query: 152 -----LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V V + QRK+++ +S E+ + LL FF + GEIEEG + DK T + +G
Sbjct: 236 PVPAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKG 295
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F YK++E++++A+++PHK G T+ + A
Sbjct: 296 FALFVYKSIESSRRALEEPHKIFEGHTLHCQKA 328
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK+FV ++ + L F GEIEEG + DK+TGK +G+ YK +ES++ A
Sbjct: 251 TQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRA 310
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K+ +G C A +G
Sbjct: 311 LEEPHKIFEGHTLHCQKAIDG 331
>gi|82621124|gb|ABB86250.1| RNA-binding protein AKIP1-like [Solanum tuberosum]
Length = 498
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 129/213 (60%), Gaps = 7/213 (3%)
Query: 34 SLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAF 93
+LL+P +K QL L+ ++YP E I+ +A DP HRK+FV GL W+TT+ETL + F
Sbjct: 120 NLLEPFTKDQLTALIKEALAKYPDFKENIQKLADKDPAHRKIFVHGLGWDTTAETLTSVF 179
Query: 94 RVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG-- 151
+GEIE+ + DK +GKS+GYGFI +KH + AL+ P K I R+ C LA G
Sbjct: 180 ATYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPV 239
Query: 152 -----LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
+ V + QRK+++ ++ ++ + LL +F + GE+EEG + DK + + +G
Sbjct: 240 PAPPPTTATPPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKG 299
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F YKTVE A+KA+++PHKT G T+ + A
Sbjct: 300 FCLFVYKTVEGARKALEEPHKTFEGHTLHCQKA 332
>gi|297820462|ref|XP_002878114.1| hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp.
lyrata]
gi|297323952|gb|EFH54373.1| hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 132/222 (59%), Gaps = 14/222 (6%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P SK QL+ LL ++P +A I+ VA DPVHRK+FV GL W+T +ETL
Sbjct: 100 IQDLLEPFSKEQLLSLLKEAAEKHPDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIE 159
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF+ +GEIE+ ++DK +GKS+GYGFI YK ++AL+ P K I R+ C LA +G
Sbjct: 160 AFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKG 219
Query: 152 --LSGVS------------AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAY 197
G S + + Q+K+Y+ + E+ + LL FF + GEIEEG +
Sbjct: 220 PVFGGASIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLGFFSKFGEIEEGPLGL 279
Query: 198 DKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
DK T +GF YK+ E+AK+A+++PHKT G + + A
Sbjct: 280 DKFTGRPKGFCLFVYKSAESAKRALEEPHKTFEGHILHCQKA 321
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
++++ +K++V + + L F GEIEEG + DK TG+ +G+ YK E
Sbjct: 239 SNSEHTQKKIYVSNVGAELDPQKLLGFFSKFGEIEEGPLGLDKFTGRPKGFCLFVYKSAE 298
Query: 126 STQSALRAPSKLIDGRLAVCNLACEG 151
S + AL P K +G + C A +G
Sbjct: 299 SAKRALEEPHKTFEGHILHCQKAIDG 324
>gi|356554258|ref|XP_003545465.1| PREDICTED: uncharacterized protein LOC100783742 [Glycine max]
Length = 494
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 132/219 (60%), Gaps = 6/219 (2%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+P +K QL L+++ +P + ++ +A DP HRK+FV GL W+ T++TL A
Sbjct: 129 VEKLLEPFTKEQLHSLVTQAVDMFPEFVDSVRRLADVDPAHRKIFVHGLGWDATADTLTA 188
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F +GEIE+ + DK +GKS+GY FI +KH + + AL+ P K I R C LA G
Sbjct: 189 VFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAG 248
Query: 152 -----LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V+ V + QRK+++ ++ E+ + LL FF + GE+E+G + DK+T + +G
Sbjct: 249 PVPAPPPNVTPVSEYTQRKIFVSNVNAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKG 308
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTHKG 244
F YK+VE+AKKA+++PHK G T+ + A D KG
Sbjct: 309 FALFVYKSVESAKKALEEPHKNYEGHTLYCQKAVDGPKG 347
>gi|302754808|ref|XP_002960828.1| hypothetical protein SELMODRAFT_70937 [Selaginella moellendorffii]
gi|300171767|gb|EFJ38367.1| hypothetical protein SELMODRAFT_70937 [Selaginella moellendorffii]
Length = 251
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 141/253 (55%), Gaps = 23/253 (9%)
Query: 5 KKRKMEDDNILINGQDFNSSSS---SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEE 61
KKRK E+D G D S D L+ LL+PL + + +L Q+P++ EE
Sbjct: 1 KKRKAEEDP----GGDAGGVEQPDLDSADVLK-LLEPLDRGAMHYILQISCLQHPAVLEE 55
Query: 62 IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
++ DP HRKLFVRGL W+TT+ETL F GE++E +I DKAT KSRG+GF+++
Sbjct: 56 VRRYVDRDPAHRKLFVRGLGWDTTAETLKGVFSQSGEVDEAVIIRDKATQKSRGFGFVSF 115
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSA---------------VPDLAQRKL 166
KHM+ AL+ PSK IDGR+ C A S + D++ RK+
Sbjct: 116 KHMDGALRALKEPSKRIDGRMTACQFASTSSSSTPCSSITPSINPPPPRPFIEDVSTRKI 175
Query: 167 YIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH 226
Y+G + + + +L F + GEI EG + +D+ T S+GF + Y+T E A+KA+ DP
Sbjct: 176 YVGSVPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIYRTSEGARKALLDPF 235
Query: 227 KTLGGRTIIVKLA 239
KT+ G + KLA
Sbjct: 236 KTIDGHQVHCKLA 248
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
PSI D RK++V + T+++ + A F GEI EG + +D++TG S+G
Sbjct: 156 PSINPPPPRPFIEDVSTRKIYVGSVPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKG 215
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
+ I Y+ E + AL P K IDG C LA EG
Sbjct: 216 FALIIYRTSEGARKALLDPFKTIDGHQVHCKLAAEG 251
>gi|356501354|ref|XP_003519490.1| PREDICTED: uncharacterized protein LOC100792637 [Glycine max]
Length = 496
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 132/219 (60%), Gaps = 6/219 (2%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+P +K QL L+++ +P + ++ +A DP HRK+FV GL W+ T+ETL +
Sbjct: 130 VEKLLEPFTKEQLHSLVTQAVDMFPEFVDSVRRIADVDPAHRKIFVHGLGWDATAETLTS 189
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F +GEIE+ + DK +GKS+GY FI +KH + + AL+ P K I R C LA G
Sbjct: 190 VFGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAG 249
Query: 152 -----LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V+ V + QRK+++ +S E+ + LL FF + GE+E+G + DK+T + +G
Sbjct: 250 PVPAPPPSVTPVSEYTQRKIFVSNVSAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKG 309
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTHKG 244
F YK+VE+AKKA+++P+K G T+ + A D KG
Sbjct: 310 FALFVYKSVESAKKALEEPNKNYEGHTLYCQKAVDGPKG 348
>gi|15232459|ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42572443|ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|8777484|dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana]
gi|17380744|gb|AAL36202.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20259621|gb|AAM14167.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|222422941|dbj|BAH19456.1| AT3G15010 [Arabidopsis thaliana]
gi|332642081|gb|AEE75602.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642082|gb|AEE75603.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 156/258 (60%), Gaps = 9/258 (3%)
Query: 1 MEDVKKRKMEDDNILINGQD---FNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPS 57
M+ +KKRK++++ +N + S QD R +++ + QL+DLL ++P
Sbjct: 1 MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQD-ARKIIERFTTDQLLDLLQEAIVRHPD 59
Query: 58 IAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYG 117
+ E ++ A +D RKLF+RGLA +TT+E L + F +G++EE VI DK TGKS+GYG
Sbjct: 60 VLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYG 119
Query: 118 FITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGV-SAVPDLAQRKLYIGGLSPEVT 176
F+T+ H++ AL+ PSK IDGR+ V LA G G S + D++ RK+Y+ + ++
Sbjct: 120 FVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMP 179
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ LLN F +G++EEG + +DK T +SRGF YKT E A+ A+ DP K + G+ +
Sbjct: 180 ADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNC 239
Query: 237 KLADTHK--GKP--PQTQ 250
KLA K GKP PQ Q
Sbjct: 240 KLAVDGKKGGKPGMPQAQ 257
>gi|297830052|ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata]
gi|297328748|gb|EFH59167.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata]
Length = 404
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 147/242 (60%), Gaps = 3/242 (1%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS--SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSI 58
M+ +KKRK++++ + + + R +++ + QL+DLL ++P +
Sbjct: 1 MDMMKKRKLDENGGGLITNGGGIIGPTRLTPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
+ ++S A +D RKLF+RGLA +TT+E L + F +G++EE VI DK TGKS+GYGF
Sbjct: 61 LDSVRSTADSDISQRKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYGF 120
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGV-SAVPDLAQRKLYIGGLSPEVTT 177
+T+ H++ AL+ PSK IDGR+ V LA G G S + D++ RK+Y+ + ++
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180
Query: 178 EVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVK 237
+ LLN F +G++EEG + +DK T +SRGF YKT E A+ A+ DP K + G+ + K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHLNCK 240
Query: 238 LA 239
LA
Sbjct: 241 LA 242
>gi|302804178|ref|XP_002983841.1| hypothetical protein SELMODRAFT_45421 [Selaginella moellendorffii]
gi|300148193|gb|EFJ14853.1| hypothetical protein SELMODRAFT_45421 [Selaginella moellendorffii]
Length = 251
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 141/253 (55%), Gaps = 23/253 (9%)
Query: 5 KKRKMEDDNILINGQDFNSSSS---SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEE 61
KKRK E+D G D S D L+ LL+PL + + +L Q+P++ EE
Sbjct: 1 KKRKAEEDP----GGDAGGVEQPDLDSADVLK-LLEPLDRGAMHYILQISCLQHPAVLEE 55
Query: 62 IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
++ DP HRKLFVRGL W+TT+ETL F GE++E +I DKAT KSRG+GF+++
Sbjct: 56 VRRYVDRDPAHRKLFVRGLGWDTTTETLKGVFSQSGEVDEAVIIRDKATQKSRGFGFVSF 115
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSA---------------VPDLAQRKL 166
KHM+ AL+ PSK IDGR+ C A S + D++ RK+
Sbjct: 116 KHMDGALRALKEPSKRIDGRMTACQFASTSSSSTPCSSITPSMNPPPPRPFIEDVSTRKI 175
Query: 167 YIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH 226
Y+G + + + +L F + GEI EG + +D+ T S+GF + ++T E A+KA+ DP
Sbjct: 176 YVGSVPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIFRTSEGARKALLDPF 235
Query: 227 KTLGGRTIIVKLA 239
KT+ G + KLA
Sbjct: 236 KTIDGHQVHCKLA 248
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D RK++V + T+++ + A F GEI EG + +D++TG S+G+ I ++ E +
Sbjct: 169 DVSTRKIYVGSVPVGTSADKVLAIFSQFGEIAEGPLGFDRSTGASKGFALIIFRTSEGAR 228
Query: 129 SALRAPSKLIDGRLAVCNLACEG 151
AL P K IDG C LA EG
Sbjct: 229 KALLDPFKTIDGHQVHCKLAAEG 251
>gi|255562178|ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538696|gb|EEF40297.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 478
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 136/240 (56%), Gaps = 12/240 (5%)
Query: 12 DNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPV 71
+ I GQ ++ D + +LL+P K QLV+LL ++ +A+ I+ +A ADP
Sbjct: 74 NQIDGGGQGDVNNDYDDDDPIENLLEPFGKEQLVNLLKEASDKHRDVADRIRKIADADPA 133
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
HRK+FV GL W++T+ETL AF+ +GEIE+ + DK +GKS+GYGFI +K + AL
Sbjct: 134 HRKIFVHGLGWDSTAETLTNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKAL 193
Query: 132 RAPSKLIDGRLAVCNLACEG------------LSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
P K I R+ C LA G G V + QRK+YI + ++ +
Sbjct: 194 EEPQKKIGNRMTACQLASMGPVPTSTAPANTPAPGQQQVSEYTQRKIYISNVGADLDPQQ 253
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
L +FF + GEIEEG + DK T + +GF YK+VE+AKKA+++PHK G + + A
Sbjct: 254 LTSFFSKFGEIEEGPLGLDKLTGKPKGFCLFVYKSVESAKKALEEPHKNFEGHILHCQKA 313
>gi|357493687|ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
gi|355518467|gb|AET00091.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
Length = 523
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 131/219 (59%), Gaps = 6/219 (2%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+P +K QL L+ + +YP ++E ++ +A DP HRK+FV GL W+ T+ETL
Sbjct: 124 VEKLLEPFTKEQLHALVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAETLTT 183
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F +GEIE+ + DKA+GKS+GY FI +KH + AL+ P K+I R C LA G
Sbjct: 184 TFSKYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLASAG 243
Query: 152 -----LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V + QRK+++ +S ++ + LL FF + GE+++G + DK T + +G
Sbjct: 244 PVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKPKG 303
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTHKG 244
F YKTVE+AKKA+++P+K G T+ + A D KG
Sbjct: 304 FALFVYKTVESAKKALEEPNKVFEGHTLYCQKAVDGPKG 342
>gi|379061692|gb|AFC89654.1| RBP42 [Elaeis guineensis]
Length = 413
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 145/240 (60%), Gaps = 5/240 (2%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE 60
M+ K++ D+N G S + + + R +++P ++ L+D++ + + +
Sbjct: 1 MDPTSKKRKSDEN----GAVVASPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLD 56
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
++++A DP RKLF+RGL W TT+E+L F +GE+EE VI DKATGKS+GYGFIT
Sbjct: 57 AVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFIT 116
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVP-DLAQRKLYIGGLSPEVTTEV 179
++H++ AL+ PSK IDGR+ V LA G + + D++ RK+Y+G + ++ ++
Sbjct: 117 FRHIDGALLALKEPSKKIDGRMTVTQLAAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDR 176
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
LL F +GEIEEG + +DK T + RGF YKT E A ++ DP K + G ++ KLA
Sbjct: 177 LLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLA 236
>gi|312281743|dbj|BAJ33737.1| unnamed protein product [Thellungiella halophila]
Length = 479
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 137/233 (58%), Gaps = 16/233 (6%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P SK QL++LL ++ +A I+ VA DPVHRK+FV GL W+T +ETL
Sbjct: 104 IKDLLEPFSKEQLLNLLKEAAGKHLDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIE 163
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF+ +GEIE+ ++DK +GKS+GYGFI YK ++AL+ P K I R+ C LA +G
Sbjct: 164 AFKQYGEIEDCKAVFDKVSGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKG 223
Query: 152 --------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAY 197
+ + + Q+K+Y+ + E+ + LL FF R GEIEEG +
Sbjct: 224 PVFGGNPVAAAASVVPAQHSNSEHTQKKIYVSNVGAELDPQKLLAFFSRFGEIEEGPLGL 283
Query: 198 DKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTHK-GKPPQ 248
DK T +GF YK+ E+AK+A+++PHKT G + + A D K GKP Q
Sbjct: 284 DKFTGRPKGFCLFVYKSPESAKRALEEPHKTFEGHILHCQKAIDGPKPGKPQQ 336
>gi|242058013|ref|XP_002458152.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor]
gi|241930127|gb|EES03272.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor]
Length = 445
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 151/263 (57%), Gaps = 13/263 (4%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS--SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSI 58
M+ K++ D+N + +++ ++D + LL+PLS+ QL D+ +
Sbjct: 1 MDPFSKKRKPDENGAVTASPAGGAATLGLTRDDVLRLLEPLSRDQLADIAAAAALVSAHA 60
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
+ +++ A DP RKLFVRGL W TTS++L A F +G++EE VI DK TG+S+GYGF
Sbjct: 61 LDAVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKTTGRSKGYGF 120
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNL----------ACEGLSGVSAVPDLAQRKLYI 168
+T++H +S AL+ PSK IDGR+ V L SG + V D+A RK+++
Sbjct: 121 VTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPSGGAAGSGGAPVADVALRKIFV 180
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT 228
G + ++ +E LL F +GEIEEG + +DK T + RGF YKT E A+ ++ D K
Sbjct: 181 GNVPADMPSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKV 240
Query: 229 LGGRTIIVKLA-DTHKGKPPQTQ 250
+ G ++ KLA + K K Q+Q
Sbjct: 241 IDGHQLVCKLAIEGKKAKQGQSQ 263
>gi|414881835|tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 1 [Zea mays]
gi|414881836|tpg|DAA58967.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 2 [Zea mays]
Length = 447
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 152/266 (57%), Gaps = 13/266 (4%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS--SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSI 58
M+ K++ D+N + +++ ++D + LL+PLS+ QL D+ +
Sbjct: 1 MDPFSKKRKPDENGAVTASPAGGAATLGLTRDDVIRLLEPLSRDQLADIAAAAALVSSQA 60
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
+ +++ A DP RKLFVRGL W TTS++L A F +G++EE VI DK TG+S+GYGF
Sbjct: 61 LDAVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKPTGRSKGYGF 120
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNL----------ACEGLSGVSAVPDLAQRKLYI 168
+T++H +S AL+ PSK IDGR+ V L SG + V D++ RK+++
Sbjct: 121 VTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPAGGPAGSGGAPVSDVSLRKIFV 180
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT 228
G + ++ +E LL F +GEIEEG + +DK T + RGF YKT E A+ ++ D K
Sbjct: 181 GNVPADMASERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKV 240
Query: 229 LGGRTIIVKLA-DTHKGKPPQTQLPA 253
+ G ++ KLA D K K Q+Q P
Sbjct: 241 IDGHQLVCKLALDGKKEKQGQSQQPG 266
>gi|226504174|ref|NP_001150933.1| heterogeneous nuclear ribonucleoprotein A3-like protein 2 [Zea
mays]
gi|195643046|gb|ACG40991.1| heterogeneous nuclear ribonucleoprotein A3-like protein 2 [Zea
mays]
Length = 447
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 152/266 (57%), Gaps = 13/266 (4%)
Query: 1 MEDVKKRKMEDDNILINGQDFNSSSSS--SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSI 58
M+ K++ D+N + +++ ++D + LL+PLS+ QL D+ +
Sbjct: 1 MDPFSKKRKPDENGAVTASPAGGAATLGLTRDDVIRLLEPLSRDQLADIAAAAALVSSQA 60
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
+ +++ A DP RKLFVRGL W TTS++L A F +G++EE VI DK TG+S+GYGF
Sbjct: 61 LDAVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKPTGRSKGYGF 120
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNL----------ACEGLSGVSAVPDLAQRKLYI 168
+T++H +S AL+ PSK IDGR+ V L SG + V D++ RK+++
Sbjct: 121 VTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPAGGPAGSGGAPVSDVSLRKIFV 180
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT 228
G + ++ +E LL F +GEIEEG + +DK T + RGF YKT E A+ ++ D K
Sbjct: 181 GNVPADMASERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKV 240
Query: 229 LGGRTIIVKLA-DTHKGKPPQTQLPA 253
+ G ++ KLA D K K Q+Q P
Sbjct: 241 IDGHQLVCKLALDGKKEKQGQSQQPG 266
>gi|224136494|ref|XP_002326874.1| predicted protein [Populus trichocarpa]
gi|222835189|gb|EEE73624.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 251/528 (47%), Gaps = 29/528 (5%)
Query: 373 RLFSKSLP----FSNENVSKSPFVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEK 428
R FS SLP F++ K AQ A+ +YLH TR+LP+ A+ +SKNS +
Sbjct: 16 RHFSSSLPKRPIFTSVPWKYKNQAIKLAQQALTDYLHSTRSLPYSYADQISKNSLVSLSN 75
Query: 429 LIERFE-NQLDVQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLL 487
L+ + ++LRYHPINE E F+ES+G+ E S FL + F+S++ +
Sbjct: 76 LVSNIHFTSPTFATSLQKYLRYHPINELEFFYESIGIDYDEVSGFLSNDKFFISEEGSAI 135
Query: 488 ENYHVLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPY 547
VLC++G NK+G + KE + VF +S+L + S + + + + P+
Sbjct: 136 NVSCVLCDFGFPWNKLGMLYKEEKRVFSMSEEEVKSRLCGLKGFRFSTTSVIGISLAFPF 195
Query: 548 LLIGDVNTE----FVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSD 603
+L G+++ E F ++ ++ ++ESC +E W + R +R+F +LGC
Sbjct: 196 VLRGELSGEIGALFDDLKRVFVDFDLESC------VEGNVDAWYEVCRKIRVFYDLGCEK 249
Query: 604 EQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQ 663
++G L+ + + + + + KFG + ++ + L P I + +
Sbjct: 250 GKVGELMGKSKRIFVDYPVEVLVQKAEFFCKFGVRKEDVGLLLLTKPGILDFQLEGQVIS 309
Query: 664 CLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNV-----------GKKRLC 712
L + +E+ + + + + G + ++ + + + L
Sbjct: 310 VKGLLKHFGLSAEELKSVAQNYGHVFGRNKMANLPHVMRAMELHEWFFNKIKDGNHQLLA 369
Query: 713 EYIQENPLELKKLALGSRVGRLPAEKERSQLL-RTKFLLDVGYVENSNEMAKALKHFRGR 771
Y+ +P E + R+ + + + +FL +G+ EN+ + K L G
Sbjct: 370 SYVMSDPDEDLDEKYRDSLERIQCTRTPMHTMNKLEFLHAIGFGENALTI-KVLTDLHGT 428
Query: 772 GAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSF 831
+ELQER DCL+ G+ +C MIR+ P+IL+ K ++++ K+++L + L +L F
Sbjct: 429 SSELQERVDCLLRYGIVFSKLCSMIRMMPKILSQKPEILQQKLNYLCEDMKSSLQYLDIF 488
Query: 832 PSYFNYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQ 878
PS+ + E RIK R + WL + G+ + ++++A S+K+F+ +
Sbjct: 489 PSFLCFNLENRIKPRHRFHMWLTERGFCKQEYSIASIVATSDKSFVAR 536
>gi|255577238|ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223531017|gb|EEF32870.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 462
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 135/233 (57%), Gaps = 16/233 (6%)
Query: 23 SSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAW 82
++ D + LL+P K QL++LL + +A+ I+ +A ADPVHRK+FV GL W
Sbjct: 79 ANDEDDDDPIEKLLEPFGKEQLINLLREAADTHRDVADHIRKIADADPVHRKIFVHGLGW 138
Query: 83 NTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRL 142
+T++ETL AF+ +GEIE+ + DK +GKS+GYGFI +K + AL+ P K I R+
Sbjct: 139 DTSAETLTNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALQEPQKKIGNRM 198
Query: 143 AVCNLAC-----EGLSGVSA-----------VPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
C LA G + SA V D +RK+Y+ ++ ++ + L NFF +
Sbjct: 199 TACQLASIGPVPVGQAAASAVTTSHHPQHQQVSDYTRRKIYVSNVAADLDPKELTNFFSK 258
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GEIEEG + DK T + +GF YK+ E+AK+A+++PHK+ G + + A
Sbjct: 259 FGEIEEGPLGLDKLTGKPKGFCLFVYKSAESAKRALEEPHKSFEGHMLHCQKA 311
>gi|168045478|ref|XP_001775204.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673417|gb|EDQ59940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 167
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 115/167 (68%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+FVRGL W++T+ETL F GE+EEGAV+ DK TGKSRG+GF+T+ HM+ Q +L+
Sbjct: 1 RKIFVRGLGWDSTTETLKTVFSQFGEVEEGAVVMDKGTGKSRGFGFVTFIHMDGAQRSLK 60
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
PSK IDGR+ C LA G ++ +++ RK+Y+G +S +++ + LL FF +GEI E
Sbjct: 61 EPSKRIDGRMTDCQLASTGALQINPNQEVSTRKIYVGNISLDLSADRLLAFFAGYGEIGE 120
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G + +DK T SRGF YKTVEA K+A+ +P KTL G + KLA
Sbjct: 121 GPLGFDKFTGRSRGFALFIYKTVEATKRALLEPIKTLDGIQMYCKLA 167
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RK+++ GL + TTE L F + GE+EEG+V DK T +SRGFGFVT+ ++ A++++
Sbjct: 1 RKIFVRGLGWDSTTETLKTVFSQFGEVEEGAVVMDKGTGKSRGFGFVTFIHMDGAQRSLK 60
Query: 224 DPHKTLGGRTIIVKLADT 241
+P K + GR +LA T
Sbjct: 61 EPSKRIDGRMTDCQLAST 78
>gi|296082474|emb|CBI21479.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 130/230 (56%), Gaps = 3/230 (1%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
D L+ LL+P SK QL+ +S + S+ + I+ A D HRK+FV GL W+TT ETL
Sbjct: 63 DKLQKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETL 122
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
AAF +G+IE+ V+ D+ TGK++GYGF+ +K + AL+ P K I+ R+ LA
Sbjct: 123 LAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLAS 182
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
G S D RK+Y+ + +V E L +FF + GEIE G + +D T +SRGF
Sbjct: 183 MGPSPPPQSQDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFAL 242
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK---PPQTQLPAAVV 256
YK E+A+KA++DP++ G + + A K K PQ QL A
Sbjct: 243 FVYKNQESARKALEDPYRIFEGHQLHCQKATEGKNKVPAQPQPQLAAVAA 292
>gi|224086681|ref|XP_002307930.1| predicted protein [Populus trichocarpa]
gi|222853906|gb|EEE91453.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 21/238 (8%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+P K QL++LL + +A++I+ VA DPVHRK+FV GL W+T +E L
Sbjct: 89 IEKLLEPFGKDQLINLLREAADGHRDVADKIRQVADQDPVHRKIFVHGLGWDTNAEALIN 148
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA--- 148
AF+ +GEIE+ + DK TGKS+GYGFI +K ++AL+ P K I R+A C LA
Sbjct: 149 AFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALKEPQKKIGNRMAACQLASTG 208
Query: 149 -----CEGLSG-VSAVPDLAQ-------RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSV 195
G SG ++A Q RK+Y+ + + + L++FF GEIEEG +
Sbjct: 209 PVPQSSAGPSGPIAAAAQTQQPVSEYTLRKIYVSNVGANLDPQKLMSFFSEFGEIEEGPL 268
Query: 196 AYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-----DTHKGKPPQ 248
DK T + +GF YKTVE+AKKA+++PHK+ G + + A KPPQ
Sbjct: 269 GLDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAVDGPKHAKSQKPPQ 326
>gi|356571847|ref|XP_003554083.1| PREDICTED: poly(U)-binding-splicing factor PUF60-B-like isoform 1
[Glycine max]
gi|356571849|ref|XP_003554084.1| PREDICTED: poly(U)-binding-splicing factor PUF60-B-like isoform 2
[Glycine max]
Length = 479
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 132/221 (59%), Gaps = 13/221 (5%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+PLSK QL+ LL +++ +AE I+ A DPVHRK+FV GL W+TT+ TL +
Sbjct: 88 ISKLLEPLSKDQLLILLCEAAAKHQDVAERIRRAADEDPVHRKIFVHGLGWDTTAGTLIS 147
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
+FR +GEIE+ + DK +GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 148 SFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGARNALKEPQKKIGNRMTACQLASIG 207
Query: 152 -------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
+ S+V + Q+K+Y+ + ++ + LL FF R GEIEEG + D
Sbjct: 208 PVSNPPQTAPPAVAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLD 267
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
K T + +GF Y++ E+A++A+++PHK G + + A
Sbjct: 268 KATGKPKGFCLFVYRSPESARRALEEPHKDFEGHILHCQKA 308
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D RK+++ GL + T L++ F ++GEIE+ DK + +S+G+GF+ +KT A+
Sbjct: 125 DPVHRKIFVHGLGWDTTAGTLISSFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAR 184
Query: 220 KAVDDPHKTLGGRTIIVKLADTHK-GKPPQTQLPAAVVP 257
A+ +P K +G R +LA PPQT PA P
Sbjct: 185 NALKEPQKKIGNRMTACQLASIGPVSNPPQTAPPAVAAP 223
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P++A SV+ + +K++V + + + L A F GEIEEG + DKATGK +G
Sbjct: 218 PAVAAPSSSVS--EYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKATGKPKG 275
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
+ Y+ ES + AL P K +G + C A +G
Sbjct: 276 FCLFVYRSPESARRALEEPHKDFEGHILHCQKAIDG 311
>gi|297824045|ref|XP_002879905.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325744|gb|EFH56164.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 8/214 (3%)
Query: 35 LLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR 94
LL+P SK QL+ LL ++ +A I+ VA D VHRK+FV GL W+T +ETL AF+
Sbjct: 85 LLEPFSKDQLLILLKEAAERHSDVANRIRIVADEDSVHRKIFVHGLGWDTKAETLIEAFK 144
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG-LS 153
+GEIE+ + DK +G+S+GYGFI +K ++AL+ P K I R+ C LA G +
Sbjct: 145 QYGEIEDCKCVVDKISGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQ 204
Query: 154 GVSAV-------PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
G V P+ QRK+Y+ +S ++ + LL FF R GEIEEG + DK T +G
Sbjct: 205 GTPVVAPAQHFNPENVQRKIYVSNVSADLDPQKLLEFFSRFGEIEEGPLGLDKVTGRPKG 264
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
F Y+++E+AKKA+++PHKT G + A+
Sbjct: 265 FALFVYRSLESAKKALEEPHKTFEGHVLHCHKAN 298
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
V RK++V ++ + + L F GEIEEG + DK TG+ +G+ Y+ +ES + A
Sbjct: 220 VQRKIYVSNVSADLDPQKLLEFFSRFGEIEEGPLGLDKVTGRPKGFALFVYRSLESAKKA 279
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C+ A +G
Sbjct: 280 LEEPHKTFEGHVLHCHKANDG 300
>gi|18410591|ref|NP_567042.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|30694526|ref|NP_850710.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|30694529|ref|NP_850711.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|334186033|ref|NP_001190109.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|334186035|ref|NP_001190110.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|14194149|gb|AAK56269.1|AF367280_1 AT3g56860/T8M16_190 [Arabidopsis thaliana]
gi|9663005|emb|CAC00749.1| putative protein [Arabidopsis thaliana]
gi|14335132|gb|AAK59846.1| AT3g56860/T8M16_190 [Arabidopsis thaliana]
gi|19682816|emb|CAD28672.1| UBP1 interacting protein 2a [Arabidopsis thaliana]
gi|20259482|gb|AAM13861.1| unknown protein [Arabidopsis thaliana]
gi|21436451|gb|AAM51426.1| unknown protein [Arabidopsis thaliana]
gi|22137068|gb|AAM91379.1| At3g56860/T8M16_190 [Arabidopsis thaliana]
gi|30102516|gb|AAP21176.1| At3g56860/T8M16_190 [Arabidopsis thaliana]
gi|332646054|gb|AEE79575.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646055|gb|AEE79576.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646056|gb|AEE79577.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646057|gb|AEE79578.1| UBP1-associated protein 2A [Arabidopsis thaliana]
gi|332646058|gb|AEE79579.1| UBP1-associated protein 2A [Arabidopsis thaliana]
Length = 478
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 135/235 (57%), Gaps = 18/235 (7%)
Query: 23 SSSSSSQDH----LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVR 78
S S + +D ++ LL+P SK Q++ LL ++ +A I+ VA DPVHRK+FV
Sbjct: 86 SGSGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVH 145
Query: 79 GLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLI 138
GL W+T +ETL AF+ +GEIE+ ++DK +GKS+GYGFI YK ++AL+ P K I
Sbjct: 146 GLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKI 205
Query: 139 DGRLAVCNLACEG--LSGVS------------AVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
R+ C LA +G G + + Q+K+Y+ + E+ + LL FF
Sbjct: 206 GSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFF 265
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ GEIEEG + DK T +GF YK+ E+AK+A+++PHKT G + + A
Sbjct: 266 SKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKA 320
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
++++ +K++V + + L F GEIEEG + DK TG+ +G+ YK E
Sbjct: 238 SNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSE 297
Query: 126 STQSALRAPSKLIDGRLAVCNLACEG 151
S + AL P K +G + C A +G
Sbjct: 298 SAKRALEEPHKTFEGHILHCQKAIDG 323
>gi|227202722|dbj|BAH56834.1| AT3G56860 [Arabidopsis thaliana]
Length = 478
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 135/235 (57%), Gaps = 18/235 (7%)
Query: 23 SSSSSSQDH----LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVR 78
S S + +D ++ LL+P SK Q++ LL ++ +A I+ VA DPVHRK+FV
Sbjct: 86 SGSGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVH 145
Query: 79 GLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLI 138
GL W+T +ETL AF+ +GEIE+ ++DK +GKS+GYGFI YK ++AL+ P K I
Sbjct: 146 GLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKI 205
Query: 139 DGRLAVCNLACEG--LSGVS------------AVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
R+ C LA +G G + + Q+K+Y+ + E+ + LL FF
Sbjct: 206 GSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFF 265
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ GEIEEG + DK T +GF YK+ E+AK+A+++PHKT G + + A
Sbjct: 266 SKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKA 320
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
++++ +K++V + + L F GEIEEG + DK TG+ +G+ YK E
Sbjct: 238 SNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSE 297
Query: 126 STQSALRAPSKLIDGRLAVCNLACEG 151
S + AL P K +G + C A +G
Sbjct: 298 SAKRALEEPHKTFEGHILHCQKAIDG 323
>gi|414876934|tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
Length = 372
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S Q +++LLD K QLV+LL + + I+ VA ADP RK+FV GL W+TT+
Sbjct: 79 SDQASIQALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTT 138
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
+TL AF +GEIE+ V+ D+ TGK +GYGFI ++H ++ALR P K I R C
Sbjct: 139 DTLTEAFGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQ 198
Query: 147 LA----CEGLSGVSAVP-----------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
LA G + SA P + QRK+++ + ++ + LL FF R GEIE
Sbjct: 199 LASVGPVPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIE 258
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
EG + DK T + +GF YKT+E+AKKA+++PHK G
Sbjct: 259 EGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEG 298
>gi|194698020|gb|ACF83094.1| unknown [Zea mays]
gi|414876935|tpg|DAA54066.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
gi|414876936|tpg|DAA54067.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
Length = 379
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S Q +++LLD K QLV+LL + + I+ VA ADP RK+FV GL W+TT+
Sbjct: 79 SDQASIQALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTT 138
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
+TL AF +GEIE+ V+ D+ TGK +GYGFI ++H ++ALR P K I R C
Sbjct: 139 DTLTEAFGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQ 198
Query: 147 LA----CEGLSGVSAVP-----------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
LA G + SA P + QRK+++ + ++ + LL FF R GEIE
Sbjct: 199 LASVGPVPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIE 258
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
EG + DK T + +GF YKT+E+AKKA+++PHK G
Sbjct: 259 EGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEG 298
>gi|14596195|gb|AAK68825.1| putative protein [Arabidopsis thaliana]
gi|20148397|gb|AAM10089.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 130/222 (58%), Gaps = 14/222 (6%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P SK Q++ LL ++ +A I+ VA DPVHRK+FV GL W+T +ETL
Sbjct: 99 IQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIE 158
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF+ +GEIE+ ++DK +GKS+GYGFI YK ++AL+ P K I R+ C LA +G
Sbjct: 159 AFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKG 218
Query: 152 --LSGVS------------AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAY 197
G + + Q+K+Y+ + E+ + LL FF + GEIEEG +
Sbjct: 219 PVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGL 278
Query: 198 DKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
DK T +GF YK+ E+AK+A+++PHKT G + + A
Sbjct: 279 DKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKA 320
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
++++ +K++V + + L F GEIEEG + DK TG+ +G+ YK E
Sbjct: 238 SNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSE 297
Query: 126 STQSALRAPSKLIDGRLAVCNLACEG 151
S + AL P K +G + C A +G
Sbjct: 298 SAKRALEEPHKTFEGHILHCQKAIDG 323
>gi|449461439|ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
gi|449503048|ref|XP_004161816.1| PREDICTED: uncharacterized protein LOC101228786 [Cucumis sativus]
Length = 500
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 9/226 (3%)
Query: 23 SSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAW 82
+++ + + LL+P +K QL++LL ++ +A I+ VA ADP HRK+FV GL W
Sbjct: 117 ATTDDDDEPIHKLLEPFTKDQLINLLREAADKHVDVAGRIRMVADADPSHRKIFVHGLGW 176
Query: 83 NTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRL 142
+T +ETL F+ GEIE+ + DK +GKS+GYGFI +K + AL+ P K I R+
Sbjct: 177 DTNAETLINVFKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALKEPQKKIGNRM 236
Query: 143 AVCNLACEG---LSGVSAVPDL------AQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
C LA G + A P + QRK+Y+ + +V + LL FF + GE++EG
Sbjct: 237 TACQLASVGPVPTTNAVAAPQVPPASEYTQRKIYVSNVGADVDPQKLLAFFSQFGEVDEG 296
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK T + +GF YK++E+AKKA+++PHK G + + A
Sbjct: 297 PLGLDKMTGKPKGFCLFVYKSIESAKKALEEPHKNFEGHVLHCQKA 342
>gi|356503320|ref|XP_003520458.1| PREDICTED: uncharacterized protein LOC100819802 [Glycine max]
Length = 523
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 127/218 (58%), Gaps = 17/218 (7%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+PL K QL++LL +++ + E I+ A DPVHRK+FV GL W+TT+ TL +
Sbjct: 128 ISKLLEPLGKDQLLNLLCDAAAKHRDVEERIRKAADGDPVHRKIFVHGLGWDTTAGTLIS 187
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AFR +GEIE+ + DK +GKS+GYGFI +K Q+AL+ P K I R+ C LA G
Sbjct: 188 AFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAQNALKEPQKKIGNRMTACQLASIG 247
Query: 152 LSGVSAVP---------------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVA 196
VS P + Q+K+Y+ + ++ + LL FF R GEIEEG +
Sbjct: 248 P--VSNPPPTPMAPSAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLG 305
Query: 197 YDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
DK T + +GF Y+ E+A++A+++PHK G +
Sbjct: 306 LDKATGKPKGFCLFVYRNPESARRALEEPHKDFEGHIL 343
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 135 SKLID--GRLAVCNLACEGLSG---------VSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
SKL++ G+ + NL C+ + +A D RK+++ GL + T L++
Sbjct: 129 SKLLEPLGKDQLLNLLCDAAAKHRDVEERIRKAADGDPVHRKIFVHGLGWDTTAGTLISA 188
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F ++GEIE+ DK + +S+G+GF+ +KT A+ A+ +P K +G R +LA
Sbjct: 189 FRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAQNALKEPQKKIGNRMTACQLA 244
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
+K++V + + + L A F GEIEEG + DKATGK +G+ Y++ ES + A
Sbjct: 271 TQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKATGKPKGFCLFVYRNPESARRA 330
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 331 LEEPHKDFEGHILHCQKAIDG 351
>gi|357509099|ref|XP_003624838.1| RNA-binding protein [Medicago truncatula]
gi|355499853|gb|AES81056.1| RNA-binding protein [Medicago truncatula]
Length = 492
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 12/220 (5%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P SK Q+ LL S++ +A+ I+ +A D HRK+FV GL W+TTS TL
Sbjct: 86 IQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLIN 145
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +GEIE+ + DK +GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 146 AFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIG 205
Query: 152 ------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDK 199
V A + QRK+YI + PE+ + L FF R GEIEEG + DK
Sbjct: 206 PVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDK 265
Query: 200 DTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
T + +GF YK+ E+A++A+++PHK G + + A
Sbjct: 266 VTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK+++ + ++ L F GEIEEG + DK TGK +G+ YK ES + A
Sbjct: 228 TQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRA 287
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 288 LEEPHKEFEGHILHCQKAIDG 308
>gi|357509097|ref|XP_003624837.1| RNA-binding protein [Medicago truncatula]
gi|355499852|gb|AES81055.1| RNA-binding protein [Medicago truncatula]
Length = 499
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 12/220 (5%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P SK Q+ LL S++ +A+ I+ +A D HRK+FV GL W+TTS TL
Sbjct: 86 IQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLIN 145
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +GEIE+ + DK +GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 146 AFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIG 205
Query: 152 ------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDK 199
V A + QRK+YI + PE+ + L FF R GEIEEG + DK
Sbjct: 206 PVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDK 265
Query: 200 DTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
T + +GF YK+ E+A++A+++PHK G + + A
Sbjct: 266 VTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK+++ + ++ L F GEIEEG + DK TGK +G+ YK ES + A
Sbjct: 228 TQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRA 287
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 288 LEEPHKEFEGHILHCQKAIDG 308
>gi|194700464|gb|ACF84316.1| unknown [Zea mays]
Length = 410
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 126/216 (58%), Gaps = 15/216 (6%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S Q +++LLD K QLV+LL + + I+ VA ADP RK+FV GL W+TT+
Sbjct: 35 SDQASIQALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTT 94
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
+TL AF +GEIE+ V+ D+ TGK +GYGFI ++H ++ALR P K I R C
Sbjct: 95 DTLTEAFGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQ 154
Query: 147 LA----CEGLSGVSAVP-----------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
LA G + SA P + QRK+++ + ++ + LL FF R GEIE
Sbjct: 155 LASVGPVPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIE 214
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
EG + DK T + +GF YKT+E+AKKA+++PHK
Sbjct: 215 EGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHK 250
>gi|87162862|gb|ABD28657.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 490
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 12/220 (5%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+P SK Q+ LL S++ +A+ I+ +A D HRK+FV GL W+TTS TL
Sbjct: 86 IQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLIN 145
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +GEIE+ + DK +GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 146 AFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIG 205
Query: 152 ------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDK 199
V A + QRK+YI + PE+ + L FF R GEIEEG + DK
Sbjct: 206 PVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDK 265
Query: 200 DTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
T + +GF YK+ E+A++A+++PHK G + + A
Sbjct: 266 VTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 305
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK+++ + ++ L F GEIEEG + DK TGK +G+ YK ES + A
Sbjct: 228 TQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRA 287
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 288 LEEPHKEFEGHILHCQKAIDG 308
>gi|414876937|tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays]
gi|414876938|tpg|DAA54069.1| TPA: RNA binding protein isoform 2 [Zea mays]
Length = 454
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 126/216 (58%), Gaps = 15/216 (6%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S Q +++LLD K QLV+LL + + I+ VA ADP RK+FV GL W+TT+
Sbjct: 79 SDQASIQALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTT 138
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
+TL AF +GEIE+ V+ D+ TGK +GYGFI ++H ++ALR P K I R C
Sbjct: 139 DTLTEAFGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQ 198
Query: 147 LA----CEGLSGVSAVP-----------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
LA G + SA P + QRK+++ + ++ + LL FF R GEIE
Sbjct: 199 LASVGPVPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIE 258
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
EG + DK T + +GF YKT+E+AKKA+++PHK
Sbjct: 259 EGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHK 294
>gi|226531394|ref|NP_001149939.1| RNA binding protein [Zea mays]
gi|195635617|gb|ACG37277.1| RNA binding protein [Zea mays]
Length = 455
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 126/216 (58%), Gaps = 15/216 (6%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S Q +++LLD K QLV+LL + + I+ VA ADP RK+FV GL W+TT+
Sbjct: 80 SDQASIQALLDSFPKDQLVELLRDAAIAHGDVLTTIRRVADADPAQRKIFVHGLGWDTTT 139
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
+TL AF +GEIE+ V+ D+ TGK +GYGFI ++H ++ALR P K I R C
Sbjct: 140 DTLTEAFGPYGEIEDLKVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQ 199
Query: 147 LA----CEGLSGVSAVP-----------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
LA G + SA P + QRK+++ + ++ + LL FF R GEIE
Sbjct: 200 LASVGPVPGGAPNSAAPAPVQLQLPPVSEYTQRKIFVSNVGADIDPQKLLQFFARFGEIE 259
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
EG + DK T + +GF YKT+E+AKKA+++PHK
Sbjct: 260 EGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHK 295
>gi|224054494|ref|XP_002298288.1| predicted protein [Populus trichocarpa]
gi|222845546|gb|EEE83093.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 126/208 (60%), Gaps = 3/208 (1%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S ++ + +L P +K L+ +L S P IA EI + +DPVHRK+FV GL W+ +
Sbjct: 83 SKRETISKILQPFTKELLIKILKEAASTDPCIATEIFNSVDSDPVHRKIFVHGLGWDAHN 142
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
ETL + F+ +GEIEE ++ DKATG+S+GYGF+ +K + + AL+ P K + R C
Sbjct: 143 ETLISVFKKYGEIEECKIVTDKATGRSKGYGFLLFKTRIAARKALKEPQKKVGNRTVSCQ 202
Query: 147 LACEGLS---GVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
LA G D++ RKLYIG + P+++ E L FF + GEIE+G +DK T +
Sbjct: 203 LASLGKGQNQKQDNSSDVSLRKLYIGNVGPQISVENLREFFAQFGEIEDGPSGFDKSTMK 262
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
RGF F+ YK++E +KA+++P K G
Sbjct: 263 FRGFAFIVYKSLEGIRKALEEPVKVFEG 290
>gi|225438611|ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 396
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 130/230 (56%), Gaps = 3/230 (1%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
D L+ LL+P SK QL+ +S + S+ + I+ A D HRK+FV GL W+TT ETL
Sbjct: 49 DKLQKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETL 108
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
AAF +G+IE+ V+ D+ TGK++GYGF+ +K + AL+ P K I+ R+ LA
Sbjct: 109 LAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLAS 168
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
G S D RK+Y+ + +V E L +FF + GEIE G + +D T +SRGF
Sbjct: 169 MGPSPPPQSQDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFAL 228
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK---PPQTQLPAAVV 256
YK E+A+KA++DP++ G + + A K K PQ QL A
Sbjct: 229 FVYKNQESARKALEDPYRIFEGHQLHCQKATEGKNKVPAQPQPQLAAVAA 278
>gi|21666573|gb|AAM73765.1|AF403292_1 RNA-binding protein AKIP1 [Vicia faba]
Length = 515
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 126/217 (58%), Gaps = 9/217 (4%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ L++P +K Q+ LL +++ +A+ I+ +A D HRK+FV GL W+TTS TL
Sbjct: 110 IKDLVEPFTKEQIATLLCEAAAKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLIN 169
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +GEIE+ + DKA+GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 170 AFSQYGEIEDCKAVTDKASGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIG 229
Query: 152 LSGVSAVP---------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTN 202
+ P + QRK+YI + PE+ L +F R GEIEEG + DK T
Sbjct: 230 PVAQTPQPAVQLVQPGSEYTQRKIYISNVGPELDPHKLFAYFSRFGEIEEGPLGLDKATG 289
Query: 203 ESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +GF YK+ E+A++++++PHK G + + A
Sbjct: 290 KPKGFCLFVYKSAESARRSLEEPHKEFEGHILHCQRA 326
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + RK+++ GL + T+ L+N F ++GEIE+ DK + +S+G+GF+ +K A+
Sbjct: 147 DASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKASGKSKGYGFILFKKRSGAR 206
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPA 253
A+ +P K +G R +LA G QT PA
Sbjct: 207 NALKEPQKKIGNRMTACQLASI--GPVAQTPQPA 238
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK+++ + L A F GEIEEG + DKATGK +G+ YK ES + +
Sbjct: 249 TQRKIYISNVGPELDPHKLFAYFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRS 308
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 309 LEEPHKEFEGHILHCQRAIDG 329
>gi|326488012|dbj|BAJ89845.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 152/263 (57%), Gaps = 13/263 (4%)
Query: 5 KKRKMEDDNILINGQDFNSSSSS-SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIK 63
KKRK +++ + +++ ++D + LLDPLS+ QL D+ + + ++
Sbjct: 6 KKRKPDENGAVAASPAVGAATLGLTRDDVLRLLDPLSRDQLADIAAAAALASGVALDAVR 65
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
+ A DP RKLFVRGL W T S++L A F +G++EE VI DK TG+S+GYGF+T++H
Sbjct: 66 AAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSKGYGFVTFRH 125
Query: 124 MESTQSALRAPSKLIDGRLAVCNL--------ACEGLSGVSAVP--DLAQRKLYIGGLSP 173
+S AL+ PSK ID R+ V L G +G +P D++ RK+++G +
Sbjct: 126 ADSALLALKEPSKKIDARVTVTQLAAAGAAGGPSGGTTGAGGIPSADVSLRKIFVGNVPA 185
Query: 174 EVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRT 233
++ +E LL F +GEIEEG + +DK T + RGF YKT E A+ ++ D K + G+
Sbjct: 186 DMPSERLLAHFASYGEIEEGPLGFDKLTGKFRGFALFVYKTPEGAQASLVDSTKVIDGQQ 245
Query: 234 IIVKLA-DTHKGK-PPQTQLPAA 254
++ KLA + KGK PQ PA
Sbjct: 246 LLCKLAIEGKKGKQQPQQSGPAG 268
>gi|15226817|ref|NP_181639.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|145331087|ref|NP_001078035.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16612302|gb|AAL27512.1|AF439844_1 At2g41060/T3K9.17 [Arabidopsis thaliana]
gi|3402711|gb|AAD12005.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22137136|gb|AAM91413.1| At2g41060/T3K9.17 [Arabidopsis thaliana]
gi|110742573|dbj|BAE99200.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254826|gb|AEC09920.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330254827|gb|AEC09921.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 451
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 129/214 (60%), Gaps = 8/214 (3%)
Query: 35 LLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR 94
LL+P SK QL+ LL ++ +A I+ VA D VHRK+FV GL W+T +++L AF+
Sbjct: 90 LLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFK 149
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG-LS 153
+GEIE+ + DK +G+S+GYGFI +K ++AL+ P K I R+ C LA G +
Sbjct: 150 QYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQ 209
Query: 154 GVSAV-------PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
G V P+ QRK+Y+ +S ++ + LL FF R GEIEEG + DK T +G
Sbjct: 210 GNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKG 269
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
F Y+++E+AKKA+++PHKT G + A+
Sbjct: 270 FALFVYRSLESAKKALEEPHKTFEGHVLHCHKAN 303
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
V RK++V ++ + + L F GEIEEG + DKATG+ +G+ Y+ +ES + A
Sbjct: 225 VQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKA 284
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C+ A +G
Sbjct: 285 LEEPHKTFEGHVLHCHKANDG 305
>gi|84468368|dbj|BAE71267.1| hypothetical protein [Trifolium pratense]
Length = 482
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 125/217 (57%), Gaps = 9/217 (4%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ L++P +K Q+ LL S++ +A+ I+ +A D HRK+FV GL W+TTS TL
Sbjct: 86 IQKLIEPFTKEQIASLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLIN 145
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +GEIE+ + DK +GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 146 AFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIG 205
Query: 152 LSGVSAVP---------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTN 202
+ P + QRK+Y+ + P++ L FF R GEIEEG + DK T
Sbjct: 206 PVQQTPQPVPQLVPQGSEYTQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTG 265
Query: 203 ESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +GF YK+ E+A++A+++PHK G + + A
Sbjct: 266 KPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQRA 302
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + RK+++ GL + T+ L+N F ++GEIE+ DK + +S+G+GF+ +K A+
Sbjct: 123 DASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGAR 182
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQ 268
A+ +P K +G R +LA G QT P VP +P G+ Y Q
Sbjct: 183 NALKEPQKKIGNRMTACQLASI--GPVQQTPQP---VPQLVPQGSEYTQ 226
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK++V + + L F GEIEEG + DK TGK +G+ YK ES + A
Sbjct: 225 TQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRA 284
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 285 LEEPHKEFEGHILHCQRAIDG 305
>gi|84468340|dbj|BAE71253.1| hypothetical protein [Trifolium pratense]
Length = 414
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 125/217 (57%), Gaps = 9/217 (4%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ L++P +K Q+ LL S++ +A+ I+ +A D HRK+FV GL W+TTS TL
Sbjct: 18 IQKLIEPFTKEQIASLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLIN 77
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +GEIE+ + DK +GKS+GYGFI +K ++AL+ P K I R+ C LA G
Sbjct: 78 AFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIG 137
Query: 152 LSGVSAVP---------DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTN 202
+ P + QRK+Y+ + P++ L FF R GEIEEG + DK T
Sbjct: 138 PVQQTPQPVPQLVPQGSEYTQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTG 197
Query: 203 ESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +GF YK+ E+A++A+++PHK G + + A
Sbjct: 198 KPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQRA 234
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + RK+++ GL + T+ L+N F ++GEIE+ DK + +S+G+GF+ +K A+
Sbjct: 55 DASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGAR 114
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQ 268
A+ +P K +G R +LA G QT P VP +P G+ Y Q
Sbjct: 115 NALKEPQKKIGNRMTACQLASI--GPVQQTPQP---VPQLVPQGSEYTQ 158
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
RK++V + + L F GEIEEG + DK TGK +G+ YK ES + A
Sbjct: 157 TQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRA 216
Query: 131 LRAPSKLIDGRLAVCNLACEG 151
L P K +G + C A +G
Sbjct: 217 LEEPHKEFEGHILHCQRAIDG 237
>gi|242056941|ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
gi|241929591|gb|EES02736.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
Length = 464
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 17/217 (7%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+++LLD K QLV+LL + + I+ VA ADP RK+FV GL W+ T++TL
Sbjct: 92 IQALLDSFPKDQLVELLRDAAVAHGDVLSAIRHVADADPAQRKIFVHGLGWDATTDTLSE 151
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF +G+IE+ V+ D+ TGK +GYGFI ++H ++ALR P K I R C LA G
Sbjct: 152 AFGPYGDIEDLRVVTDRNTGKCKGYGFILFRHRSGARAALREPQKKIGNRSTACQLASVG 211
Query: 152 ------LSGVSAVPDLA-----------QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+ AVP A QRK+++ + ++ + LL FF R+GEIEEG
Sbjct: 212 PVPGGAPNSAGAVPAPAQLHLPPVSEYTQRKIFVSNVGADIDPKKLLQFFARYGEIEEGP 271
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+ DK T + +GF YKT+E+AKKA+++PHK G
Sbjct: 272 LGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFDG 308
>gi|224081210|ref|XP_002306336.1| predicted protein [Populus trichocarpa]
gi|222855785|gb|EEE93332.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 130/222 (58%), Gaps = 5/222 (2%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
L +LL+P +K QL+DL++ + PS+ I A D HR +FV G +W+TT + L +
Sbjct: 45 LSTLLEPYTKDQLIDLITNSAIKNPSLYSLIHQHADRDVTHRNVFVHGFSWDTTRQDLVS 104
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF GEIEE V+ DKATGK++GYGF+ +K ++ SAL+ ++++ R+A C LA G
Sbjct: 105 AFAAFGEIEECNVVIDKATGKAKGYGFVLFKSRKAAISALKETKRMVNDRMASCQLASVG 164
Query: 152 LSGVSAVPDLAQ-----RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
+ ++ + RK+++ + E L FF + GEIE G + +DK+T +SRG
Sbjct: 165 SANAASAAKGKELEGGVRKIFVSNVGMSTDKEKLRAFFEKFGEIENGPIGFDKETGKSRG 224
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQ 248
+ YKTVE A KA+++PHK G+ + +A K K Q
Sbjct: 225 YALFVYKTVEGAIKALEEPHKIFEGQQLRCSVATEGKNKTNQ 266
>gi|298707500|emb|CBJ30102.1| Uncharacterized protein [Ectocarpus siliculosus]
Length = 470
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 143/265 (53%), Gaps = 35/265 (13%)
Query: 5 KKRKMEDDNILINGQDF-NSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIK 63
KKR++++D N F +++ S ++ L + L PL QLV LL +GS P +EI
Sbjct: 97 KKRRLDEDG---NASAFAENTAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIH 153
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
PV++K+FVRGL W T ++L A F +GEI E V+ DK T KS+GYGF+T+K
Sbjct: 154 RACDDIPVNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKS 213
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVP------------------------ 159
M+ +AL P K+IDGR+++CNLA L +P
Sbjct: 214 MDGAHAALENPEKMIDGRVSLCNLA--ALRSSQPLPARAGGGMQGGAMQGGAGGMMGGAV 271
Query: 160 -----DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
D++ RK+++ GLS + TTE L F + GE+E+ V D+ + +S+G+GFVT++
Sbjct: 272 GGSGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRF 331
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLA 239
A AV +P K L GR +A
Sbjct: 332 AANAAAAVAEPEKQLDGRLTHCNIA 356
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D RK+FVRGL+W+TT+E+L F GE+E+ V D+A+GKS+GYGF+T++ +
Sbjct: 277 DVSARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAA 336
Query: 129 SALRAPSKLIDGRLAVCNLACEGLS 153
+A+ P K +DGRL CN+A EG S
Sbjct: 337 AAVAEPEKQLDGRLTHCNIAAEGAS 361
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+K+++ GL E + L F ++GEI E +V DK T +S+G+GFVT+K+++ A A++
Sbjct: 163 KKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAALE 222
Query: 224 DPHKTLGGRTIIVKLADTHKGKPPQTQLPA 253
+P K + GR + LA +P LPA
Sbjct: 223 NPEKMIDGRVSLCNLAALRSSQP----LPA 248
>gi|449509115|ref|XP_004163497.1| PREDICTED: uncharacterized protein LOC101228639, partial [Cucumis
sativus]
Length = 405
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 128/219 (58%), Gaps = 10/219 (4%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
L LL+P SK+QL++L+ + P++ +I++ A D HRK+FV GL W+TT ETL +
Sbjct: 48 LPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTS 107
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F GEIE+ V+ D+ TGK++GYGFI +K + AL+ P K I+ R+ C LA
Sbjct: 108 VFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLAS-- 165
Query: 152 LSGVSAVP-----DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V +VP ++ RK+Y+ + V E L FF + G++E G + +D +T +SRG
Sbjct: 166 ---VGSVPPPQSQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRG 222
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+ Y+T E A+KA+++PHK G + + A K K
Sbjct: 223 YAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNK 261
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%)
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
+A D+ RK+++ GL + T E L + F GEIE+ +V D++T +++G+GF+ +K+
Sbjct: 80 AAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNVVMDRNTGKAKGYGFILFKS 139
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
+ A KA+ +P K + R +LA PPQ+Q
Sbjct: 140 RQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQ 175
>gi|449462878|ref|XP_004149162.1| PREDICTED: uncharacterized protein LOC101213550 [Cucumis sativus]
Length = 405
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 128/219 (58%), Gaps = 10/219 (4%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
L LL+P SK+QL++L+ + P++ +I++ A D HRK+FV GL W+TT ETL +
Sbjct: 48 LPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTS 107
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
F GEIE+ V+ D+ TGK++GYGFI +K + AL+ P K I+ R+ C LA
Sbjct: 108 VFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLAS-- 165
Query: 152 LSGVSAVP-----DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V +VP ++ RK+Y+ + V E L FF + G++E G + +D +T +SRG
Sbjct: 166 ---VGSVPPPQSQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRG 222
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+ Y+T E A+KA+++PHK G + + A K K
Sbjct: 223 YAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNK 261
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%)
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
+A D+ RK+++ GL + T E L + F GEIE+ +V D++T +++G+GF+ +K+
Sbjct: 80 AAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNVVMDRNTGKAKGYGFILFKS 139
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
+ A KA+ +P K + R +LA PPQ+Q
Sbjct: 140 RQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQ 175
>gi|224137512|ref|XP_002322576.1| predicted protein [Populus trichocarpa]
gi|222867206|gb|EEF04337.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 26/229 (11%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+P K QL++LL + +AE+I+ VA DPVHRK+FV GL W+T +E L +
Sbjct: 92 VEKLLEPFGKDQLINLLREAADAHRDVAEKIRQVADQDPVHRKIFVHGLGWDTNAEALMS 151
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF+ +GEIE+ + DK +GKS+GYGFI +K + AL+ P K I R+ C LA
Sbjct: 152 AFKPYGEIEDCKAVCDKVSGKSKGYGFILFKRRSGARKALKEPQKKIGNRMTACQLAS-- 209
Query: 152 LSGVSAVPDLAQ---------------------RKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+ VP + RK+Y+ ++ ++ + L ++F GEI
Sbjct: 210 ---IGPVPQSSGGQAGPVAAAAQAQQPVSEYTLRKIYVSNVAADLDPQKLYSYFSEFGEI 266
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
EEG + DK T + +GF YK+ E AKKA+++PHK+ G + + A
Sbjct: 267 EEGPLGLDKATGKPKGFCLFVYKSSEGAKKALEEPHKSFEGHMLHCQKA 315
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK++V +A + + L + F GEIEEG + DKATGK +G+ YK E + AL
Sbjct: 240 RKIYVSNVAADLDPQKLYSYFSEFGEIEEGPLGLDKATGKPKGFCLFVYKSSEGAKKALE 299
Query: 133 APSKLIDGRLAVCNLACEG 151
P K +G + C A +G
Sbjct: 300 EPHKSFEGHMLHCQKAIDG 318
>gi|325185806|emb|CCA20310.1| hypothetical protein SELMODRAFT_151090 [Albugo laibachii Nc14]
gi|325191562|emb|CCA25854.1| hypothetical protein SELMODRAFT_163608 [Albugo laibachii Nc14]
Length = 276
Score = 162 bits (409), Expect = 9e-37, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 123/200 (61%), Gaps = 21/200 (10%)
Query: 51 LGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKAT 110
+QY +I EI++VA+AD HRK+FVRGLAWNT+SETL AF G+IEEGAVI+DK +
Sbjct: 65 FAAQYDTIYNEIRTVANADTSHRKVFVRGLAWNTSSETLRNAFGKFGDIEEGAVIFDKCS 124
Query: 111 GKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA--------------CEGLSGV- 155
GKS+GYGF+T+ ME+ Q A+ IDGR +CNLA E L +
Sbjct: 125 GKSKGYGFVTFAEMEAAQFAVDQHIVEIDGRKTMCNLASMRPDSTQVFESNPSEALYPMD 184
Query: 156 ------SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
S+ D + RKL++ GL+ + E F ++G+IE S+A D+ T +S+GFGF
Sbjct: 185 RREIMASSGFDDSDRKLFVRGLAWITSDETFRREFEKYGDIEGASIARDRKTGKSKGFGF 244
Query: 210 VTYKTVEAAKKAVDDPHKTL 229
VTY++ +A +A+ P K +
Sbjct: 245 VTYRSNASAHRALQQPQKII 264
Score = 84.3 bits (207), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 55 YPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSR 114
YP EI + + D RKLFVRGLAW T+ ET F +G+IE ++ D+ TGKS+
Sbjct: 181 YPMDRREIMASSGFDDSDRKLFVRGLAWITSDETFRREFEKYGDIEGASIARDRKTGKSK 240
Query: 115 GYGFITYKHMESTQSALRAPSKLIDG----RLAVC 145
G+GF+TY+ S AL+ P K+ID R+ +C
Sbjct: 241 GFGFVTYRSNASAHRALQQPQKIIDVTRSIRIPIC 275
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
A D + RK+++ GL+ ++E L N FG+ G+IEEG+V +DK + +S+G+GFVT+ +E
Sbjct: 80 ANADTSHRKVFVRGLAWNTSSETLRNAFGKFGDIEEGAVIFDKCSGKSKGYGFVTFAEME 139
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
AA+ AVD + GR + LA +P TQ+
Sbjct: 140 AAQFAVDQHIVEIDGRKTMCNLASM---RPDSTQV 171
>gi|357135512|ref|XP_003569353.1| PREDICTED: uncharacterized protein LOC100825606 [Brachypodium
distachyon]
Length = 448
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 141/239 (58%), Gaps = 12/239 (5%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
++D + LL+PLS+ QL D+ + + +++ A DP RKLFVRGL W T S+
Sbjct: 30 TRDDVLRLLEPLSRDQLADIAAAAALASGVALDAVRAAADRDPALRKLFVRGLGWETNSD 89
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNL 147
+L F +G++EE VI DK+TG+S+GYGF+T++H +S AL+ PSK IDGR+ V L
Sbjct: 90 SLRTIFSAYGDLEEAVVISDKSTGRSKGYGFVTFRHADSAVLALKEPSKKIDGRMTVTQL 149
Query: 148 ----------ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAY 197
+G + D++ RK+++G + ++++E LL F +GEIEEG + +
Sbjct: 150 AAAGAAGGPSGGTAGAGGAPAADVSLRKIFVGNVPADMSSERLLAHFASYGEIEEGPLGF 209
Query: 198 DKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-DTHKGK-PPQTQLPAA 254
DK T + RGF YKT + A+ ++ D KT+ G ++ KLA + KGK PQ PA
Sbjct: 210 DKQTGKFRGFALFVYKTPDGAQASLVDSIKTIEGHQLVCKLAIEGKKGKQQPQQSGPAG 268
>gi|115438550|ref|NP_001043567.1| Os01g0614500 [Oryza sativa Japonica Group]
gi|54290288|dbj|BAD61233.1| heterogeneous nuclear ribonucleoprotein A2/B1-like [Oryza sativa
Japonica Group]
gi|113533098|dbj|BAF05481.1| Os01g0614500 [Oryza sativa Japonica Group]
Length = 447
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 131/222 (59%), Gaps = 10/222 (4%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
++D L L++PLS+ QL D+ + + +++ A DP RKLFVRGL W T S+
Sbjct: 31 TRDDLLRLVEPLSRDQLADIAATAALASGVALDAVRAAADRDPALRKLFVRGLGWETNSD 90
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNL 147
+L A F G++EE VI DK+TG+S+GYGF+T++H +S AL+ PSK IDGR+ V L
Sbjct: 91 SLRAIFSAFGDLEEAVVITDKSTGRSKGYGFVTFRHADSAVLALKEPSKKIDGRMTVTQL 150
Query: 148 ----------ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAY 197
+G + D++ RK+++G + ++ +E LL F +GEIEEG + +
Sbjct: 151 AAAGAAGGASGGAAGAGGAPAADVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGF 210
Query: 198 DKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
DK T + RGF YKT E A+ ++ D K + G ++ KLA
Sbjct: 211 DKQTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLA 252
>gi|226532486|ref|NP_001148086.1| LOC100281694 [Zea mays]
gi|195615710|gb|ACG29685.1| RNA-binding protein AKIP1 [Zea mays]
gi|413919663|gb|AFW59595.1| RNA-binding protein AKIP1 isoform 1 [Zea mays]
gi|413919664|gb|AFW59596.1| RNA-binding protein AKIP1 isoform 2 [Zea mays]
Length = 521
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 29/239 (12%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
+ + LL+PLS+ QLV LL P+ ++ +DP RKLFV GL W ++E L
Sbjct: 68 EDIGKLLEPLSREQLVALLRTAAETSPATMAAVRRAVESDPASRKLFVHGLGWGASAEDL 127
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
+AF GE+E+ VI DK +G+S+GYGF+ ++ S AL P I GRLA C+LA
Sbjct: 128 RSAFSCFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALSRPQLQIGGRLAFCHLAA 187
Query: 150 EG-----------------------------LSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
G S+ PD RK+++G + +V + L
Sbjct: 188 SGPAPPASQSQNPSSNPNTNANSNSNTTTNASGSSSSQPDNMPRKIFVGNVHADVDVDRL 247
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
N+F + GEIEEG +DK+T + +GF YK+VE+A++A+++P K G+T+ V+ A
Sbjct: 248 YNYFAQFGEIEEGPFGFDKNTGKPKGFALFVYKSVESARRALEEPMKNFDGKTLNVQKA 306
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D A RKL++ GL + E L + F GE+E+ V DK + S+G+GFV +++ +A
Sbjct: 107 DPASRKLFVHGLGWGASAEDLRSAFSCFGELEDCRVISDKQSGRSKGYGFVLFRSRRSAL 166
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
+A+ P +GGR LA + PP +Q
Sbjct: 167 RALSRPQLQIGGRLAFCHLAASGP-APPASQ 196
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S + D + RK+FV + + + L F GEIEEG +DK TGK +G+ YK
Sbjct: 222 SSSQPDNMPRKIFVGNVHADVDVDRLYNYFAQFGEIEEGPFGFDKNTGKPKGFALFVYKS 281
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEG 151
+ES + AL P K DG+ A +G
Sbjct: 282 VESARRALEEPMKNFDGKTLNVQKAIDG 309
>gi|242077350|ref|XP_002448611.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
gi|241939794|gb|EES12939.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
Length = 527
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 127/234 (54%), Gaps = 29/234 (12%)
Query: 35 LLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR 94
LL+PLS+ QLV LL P+ ++ A ADP RKLFV GL W +E L +AF
Sbjct: 74 LLEPLSREQLVALLRTAAEASPATMAAVRRAAEADPASRKLFVHGLGWGAGAEDLRSAFS 133
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG--- 151
GE+E+ VI DK +G+S+GYGF+ ++ S AL P I GRLA C+LA G
Sbjct: 134 RFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALSRPQLQIGGRLAFCHLAASGPAP 193
Query: 152 -------------------------LSGVSAV-PDLAQRKLYIGGLSPEVTTEVLLNFFG 185
SG S+ PD QRK+++G + +V + L +F
Sbjct: 194 PASQSQNPSSNANTNANSSSNTTTNASGSSSSQPDNMQRKIFVGNVHADVDVDRLYEYFA 253
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ GEIEEG + +DK+T + +GF Y++ E+A++A+++P K G+T+ V+ A
Sbjct: 254 QFGEIEEGPLGFDKNTGKPKGFALFVYRSAESARRALEEPMKNFDGKTLNVQKA 307
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A D A RKL++ GL E L + F R GE+E+ V DK + S+G+GFV +++
Sbjct: 104 AAEADPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSR 163
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP-QTQLPAA 254
+A +A+ P +GGR LA + P Q+Q P++
Sbjct: 164 RSALRALSRPQLQIGGRLAFCHLAASGPAPPASQSQNPSS 203
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S + D + RK+FV + + + L F GEIEEG + +DK TGK +G+ Y+
Sbjct: 223 SSSQPDNMQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGKPKGFALFVYRS 282
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEG 151
ES + AL P K DG+ A +G
Sbjct: 283 AESARRALEEPMKNFDGKTLNVQKAIDG 310
>gi|297596504|ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group]
gi|255673092|dbj|BAF04586.2| Os01g0265800, partial [Oryza sativa Japonica Group]
Length = 524
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 123/222 (55%), Gaps = 20/222 (9%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
D +++LL+ K QLV+LLS + + + A ADP RK+FV GL W+ T+ETL
Sbjct: 147 DSIQALLNSFPKDQLVELLSAAALSHEDVLTAVHRAADADPALRKIFVHGLGWDATAETL 206
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
AF +GEIE+ V+ D+ATGK +GYGFI + ++ALR P K I R C LA
Sbjct: 207 TEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGARAALREPQKKIGNRTTACQLAS 266
Query: 150 EG---LSGVSA-----------------VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
G G++ V + QRK+++ + ++ + LL FF ++GE
Sbjct: 267 VGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQRKIFVSNVGADIDPQKLLQFFSKYGE 326
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
IEEG + DK T + +GF YKT+++AKKA+ +PHK G
Sbjct: 327 IEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEG 368
>gi|6815067|dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sativa Japonica Group]
gi|125525303|gb|EAY73417.1| hypothetical protein OsI_01299 [Oryza sativa Indica Group]
gi|125569833|gb|EAZ11348.1| hypothetical protein OsJ_01215 [Oryza sativa Japonica Group]
gi|215712214|dbj|BAG94341.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766461|dbj|BAG98769.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 490
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 123/222 (55%), Gaps = 20/222 (9%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
D +++LL+ K QLV+LLS + + + A ADP RK+FV GL W+ T+ETL
Sbjct: 113 DSIQALLNSFPKDQLVELLSAAALSHEDVLTAVHRAADADPALRKIFVHGLGWDATAETL 172
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
AF +GEIE+ V+ D+ATGK +GYGFI + ++ALR P K I R C LA
Sbjct: 173 TEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGARAALREPQKKIGNRTTACQLAS 232
Query: 150 EG---LSGVSA-----------------VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
G G++ V + QRK+++ + ++ + LL FF ++GE
Sbjct: 233 VGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQRKIFVSNVGADIDPQKLLQFFSKYGE 292
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
IEEG + DK T + +GF YKT+++AKKA+ +PHK G
Sbjct: 293 IEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEG 334
>gi|356503273|ref|XP_003520435.1| PREDICTED: uncharacterized protein LOC100800581 [Glycine max]
Length = 566
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 242/528 (45%), Gaps = 34/528 (6%)
Query: 391 FVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQ----LDVQRLIARF 446
F + Q ++ +YLH TR++P+ A ++KNS + LI L + +F
Sbjct: 33 FAISQGQKSLTDYLHATRSIPYAYANQIAKNSLTSLTTLITTLGTSSFSPLHFPHNLNKF 92
Query: 447 LRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKI 506
L YHPINEFE FFES+G+ P + LP + F S D+ LL VL +G +++G +
Sbjct: 93 LMYHPINEFEFFFESIGIHPSNFHSLLPQDKFFFSQDDTLLSAACVLYEFGFPWDRLGVL 152
Query: 507 LKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVL----- 561
E+ + + ++ ++ GL + V + P++ G + VE L
Sbjct: 153 YVESGCFLNWGASELKDRVCGFKRYGLCNEQVVGVCMAFPFVFDGQKGDDEVEALFRDLG 212
Query: 562 QILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSD---EQLGGLIRQHPGLLF 618
+ + C E +W + R +RLF +L E +G G++
Sbjct: 213 LLFGEFGLAEC--VEGKGNYSVDDWIRVCRKIRLFYDLNGGKSLVELIGRNNGGGVGVIV 270
Query: 619 EGSGSIALTMIGLLLKFGSTRNELCSIFLQFP---QIEVRKFLLNLNQCLLFLFEIKMKV 675
E + +FG+ + ++ + + P ++++ +++++ + L + M+
Sbjct: 271 EHGEEELVQAAEYFCRFGAKKEDVARLIVDGPELLELDLEAWVVDVVKLLKYF---GMRS 327
Query: 676 DEIGKILRCHFLLVGSCTLKKTNTILAYLNV-----------GKKRLCEYIQENPLELKK 724
D++ + R + ++G+ + ++ L + + L ++ P E +
Sbjct: 328 DDVEDVRRDYAHVLGTVKMGNLPNVMRALGLREWFFDKIKDGNHQLLVSFVTSCPGEFQD 387
Query: 725 LALGSRVGRLPAEKERSQ-LLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLV 783
R+ + A + + + + FL +G+ EN+ M G +LQ+RF+CL+
Sbjct: 388 EGYLGRLKAIKASRTPTHNISKLNFLHAIGFGENALTM-NVYAQMHGTSGKLQKRFNCLL 446
Query: 784 NAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EERI 842
G++ +C+MI + P+IL+ ++ K++F +GY L L++FP++ + E RI
Sbjct: 447 RLGIEFSKICKMITIHPKILSQNPQNLEQKVNFFCQEMGYSLEHLITFPAFLCFDLENRI 506
Query: 843 KLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
K R+ + W+ ++G + ++++A S+K F+ + + HP + W
Sbjct: 507 KPRYRFHMWIMEKGLSSKNYSITSMVATSDKNFVARALKIHPAALKHW 554
>gi|223948117|gb|ACN28142.1| unknown [Zea mays]
gi|414585220|tpg|DAA35791.1| TPA: hypothetical protein ZEAMMB73_646207 [Zea mays]
gi|414585221|tpg|DAA35792.1| TPA: hypothetical protein ZEAMMB73_646207 [Zea mays]
Length = 521
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 35 LLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR 94
LL+PLS+ QLV LL P+ ++ ADP RKLFV GL W +E L +AF
Sbjct: 74 LLEPLSREQLVALLRTAAEASPATMAAVRRAVEADPASRKLFVHGLGWGAGAEDLRSAFS 133
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLS- 153
GE+E+ VI DK +G+S+GYGF+ ++ S AL P I GRLA C+LA G +
Sbjct: 134 RFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALNRPQLQIGGRLAFCHLAASGPAP 193
Query: 154 -GVSAVP------------------------DLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
S P D QRK+++G + +V + L +F + G
Sbjct: 194 PAQSQNPISNANPNANSNSTSNASGSSSSQTDNIQRKIFVGNVHADVDVDRLYEYFAQFG 253
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
EIEEG + +DK+T +GF YK+VE+A++A+++P K G+T+ V+ A
Sbjct: 254 EIEEGPLGFDKNTGRPKGFALFVYKSVESARRALEEPIKNFDGKTLNVQKA 304
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D A RKL++ GL E L + F R GE+E+ V DK + S+G+GFV +++ +A
Sbjct: 108 DPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSAL 167
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLP 252
+A++ P +GGR LA + P Q+Q P
Sbjct: 168 RALNRPQLQIGGRLAFCHLAASGPAPPAQSQNP 200
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D + RK+FV + + + L F GEIEEG + +DK TG+ +G+ YK +ES +
Sbjct: 225 DNIQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVYKSVESAR 284
Query: 129 SALRAPSKLIDGRLAVCNLACEG 151
AL P K DG+ A +G
Sbjct: 285 RALEEPIKNFDGKTLNVQKAIDG 307
>gi|356523046|ref|XP_003530153.1| PREDICTED: uncharacterized protein LOC100812245 [Glycine max]
Length = 560
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 245/541 (45%), Gaps = 61/541 (11%)
Query: 391 FVRKEAQAAMLEYLHLTRNLPFMDAEHMSKNS------------------PHFVEKLIER 432
F + Q ++ +YLH TR +P+ A+ ++KNS PHF L
Sbjct: 29 FAIAQGQKSLTDYLHATRCIPYAYADKIAKNSLTSLTTLITTTLGGSFSPPHFPHNL--- 85
Query: 433 FENQLDVQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHV 492
+FLRYHPINEFE FFES+G+ P + LP + F S+D+ LL V
Sbjct: 86 -----------NKFLRYHPINEFEFFFESIGIHPSKLGSLLPQDNFFFSEDDTLLNAARV 134
Query: 493 LCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIG- 551
L +G +++G + E+ F+ + +L ++ G + + + + P++ G
Sbjct: 135 LHEFGFPWDRLGILYVESGCFFKCGASELKGRLCGFKRYGFCNAQVVGICLAFPFVFDGQ 194
Query: 552 ---DVNTEFVEVLQILKSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSD---EQ 605
+V F ++ + + + C E +W + R +RLF +L E
Sbjct: 195 KGDEVEALFCDLGLLFGELGLAEC--VEGKGNNSVDDWIGVCRKIRLFYDLNGGRSLVEL 252
Query: 606 LGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFL---QFPQIEVRKFLLNLN 662
+GG G++ E + FG+ + ++ + + + +++++ ++++
Sbjct: 253 VGGNNGVGVGVILEHGEEELVQATEYFCSFGAKKEDVARLIVDGRELLELDLKTRVVDVV 312
Query: 663 QCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNV-----GKKR------L 711
+ L + M D++ + R + ++G+ + ++ L + GK + L
Sbjct: 313 KLLKYF---GMSSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGLHEWFFGKIKDGNHCLL 369
Query: 712 CEYIQENPLELKKLA-LGSRVGRLPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRG 770
++ P E++ LG + + + FL +G+ EN+ M G
Sbjct: 370 VSFVASYPNEVQDEGYLGCLKAIQESRTPTHNISKLNFLHAIGFGENALTM-NVYAQMHG 428
Query: 771 RGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVS 830
ELQ+RFDCL+ G++ VC+MI + P+IL+ ++ K++F +G+ L LV+
Sbjct: 429 TSVELQKRFDCLLRLGIEFSKVCKMITIYPKILSQNPQNLEQKVNFFCQEMGHSLEHLVT 488
Query: 831 FPSYFNYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEV 889
FP++ + E RIK R+ + W+ ++G + + ++++A SNK F+ + HP +
Sbjct: 489 FPAFLCFDLENRIKPRYRFHMWIMEKGLSSKKYSIASMVATSNKNFVARAFKIHPAALKH 548
Query: 890 W 890
W
Sbjct: 549 W 549
>gi|326532214|dbj|BAK01483.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 27/297 (9%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+ K QLV+LL + + E ++ A ADP RK+FV GL W+TT + L
Sbjct: 115 IQELLEVFPKEQLVELLRDAAVGHRDVLESVRRAADADPAQRKIFVHGLGWDTTVDILTE 174
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AFR +GEIE+ ++ D+ TGK +GYGFI ++ ++AL P K I R C LA G
Sbjct: 175 AFRPYGEIEDLKLVSDRNTGKCKGYGFILFRRRSGARAALLEPQKKIGNRTTSCQLASLG 234
Query: 152 --LSGVSA--------------------VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
SG +A V + QRK+++ + ++ + LL FF ++GE
Sbjct: 235 PVPSGGAANNPMLATAPALAPAALILPPVSEYTQRKIFVSNVGADIDPQKLLQFFSKYGE 294
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG-KPPQ 248
IEEG + DK T + +GF Y+T+E AKKA+ +PHK+ G +++ G KP +
Sbjct: 295 IEEGPLGLDKATGKPKGFALFVYRTLEGAKKALQEPHKSFEG--VVLHCQKAIDGPKPNR 352
Query: 249 TQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGY--SYPQNVPPYPTSSYTSPNTAPV 303
A + AGY + ++ GY + P ++ P + P P
Sbjct: 353 GGGHGATTTIERKGAAGYSASSRSLPGNVGAGYGMASPASLSSMPGAVPGGPGMNPA 409
>gi|326506732|dbj|BAJ91407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 27/297 (9%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
++ LL+ K QLV+LL + + E ++ A ADP RK+FV GL W+TT + L
Sbjct: 115 IQELLEVFPKEQLVELLRDAAVGHRDVLESVRRAADADPAQRKIFVHGLGWDTTVDILTE 174
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AFR +GEIE+ ++ D+ TGK +GYGFI ++ ++AL P K I R C LA G
Sbjct: 175 AFRPYGEIEDLKLVSDRNTGKCKGYGFILFRRRSGARAALLEPQKKIGNRTTSCQLASLG 234
Query: 152 --LSGVSA--------------------VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
SG +A V + QRK+++ + ++ + LL FF ++GE
Sbjct: 235 PVPSGGAANNPMLATAPALAPAALILPPVSEYTQRKIFVSNVGADIDPQKLLQFFSKYGE 294
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG-KPPQ 248
IEEG + DK T + +GF Y+T+E AKKA+ +PHK+ G +++ G KP +
Sbjct: 295 IEEGPLGLDKATGKPKGFALFVYRTLEGAKKALQEPHKSFEG--VVLHCQKAIDGPKPNR 352
Query: 249 TQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGY--SYPQNVPPYPTSSYTSPNTAPV 303
A + AGY + ++ GY + P ++ P + P P
Sbjct: 353 GGGHGATTTIERKGAAGYSASSRSLPGNVGAGYGMASPASLSSMPGAVPGGPGMNPA 409
>gi|326490764|dbj|BAJ90049.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505372|dbj|BAJ91121.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519588|dbj|BAK00167.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530954|dbj|BAK01275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 506
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 127/235 (54%), Gaps = 24/235 (10%)
Query: 29 QDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSET 88
++ + LL+PLS+ QLV LL P+ ++ A DP RKLFV GL W E
Sbjct: 66 EEDVTKLLEPLSREQLVALLRAAAESSPATMAAVRRAAECDPASRKLFVHGLGWGAGVED 125
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
L +AF GE+E+ VI DK +GKS+GYGF+ ++ S ALR P I GRLA C+LA
Sbjct: 126 LRSAFSRFGELEDCRVITDKQSGKSKGYGFVLFQSRTSALRALRRPQLSIGGRLAFCHLA 185
Query: 149 CEG---------------LSG---------VSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
G SG S+ D QRK+++G + +V L +F
Sbjct: 186 ASGPAPPASQSQNPSSNASSGAANNSAPASSSSQADNMQRKIFVGNVHADVDVNRLYEYF 245
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ GEIEEG + +DK T + +GF YK+V++A++A+++P ++ G+ + V+ A
Sbjct: 246 SQFGEIEEGPLGFDKSTGKPKGFALFVYKSVDSARRALEEPMRSFDGKMLNVQKA 300
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D A RKL++ GL E L + F R GE+E+ V DK + +S+G+GFV +++ +A
Sbjct: 106 DPASRKLFVHGLGWGAGVEDLRSAFSRFGELEDCRVITDKQSGKSKGYGFVLFQSRTSAL 165
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPP-QTQLPAA 254
+A+ P ++GGR LA + P Q+Q P++
Sbjct: 166 RALRRPQLSIGGRLAFCHLAASGPAPPASQSQNPSS 201
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D + RK+FV + + L F GEIEEG + +DK+TGK +G+ YK ++S +
Sbjct: 221 DNMQRKIFVGNVHADVDVNRLYEYFSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVDSAR 280
Query: 129 SALRAPSKLIDGRLAVCNLACEG 151
AL P + DG++ A +G
Sbjct: 281 RALEEPMRSFDGKMLNVQKAIDG 303
>gi|357166238|ref|XP_003580645.1| PREDICTED: uncharacterized protein LOC100844841 [Brachypodium
distachyon]
Length = 510
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+PLS+ QLV LL P+ ++ A DP RKLFV GL W +E L +
Sbjct: 67 ITKLLEPLSREQLVALLRVAAETSPATMAAVRRAAETDPASRKLFVHGLGWGAGAEDLRS 126
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF G++E+ VI DK +GKS+GYGF+ ++ + ALR P I GR+A C+LA G
Sbjct: 127 AFSRFGDLEDCRVISDKQSGKSKGYGFVLFRSRTAALRALRRPQLQIGGRIAFCHLAASG 186
Query: 152 L-----------------------------SGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
+ S+ PD RK+++G + +V + L
Sbjct: 187 PAPPSSQSQSQNPSSNNNANSNPGATNTAPATSSSQPDNMPRKIFVGNVHADVDVDRLYE 246
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA--D 240
+F + GEIEEG + +DK T + +GF YK+VE+A++A+++P + G+ + ++ A
Sbjct: 247 YFSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVESARRALEEPMRNFDGKMLNIQKAIDG 306
Query: 241 THKGKP 246
KG P
Sbjct: 307 RTKGTP 312
>gi|115460844|ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa Japonica Group]
gi|113565593|dbj|BAF15936.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|215715302|dbj|BAG95053.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764985|dbj|BAG86682.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 515
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 25/233 (10%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
+ LL+PLS+ QLV LL P+ ++ A ADP RKLFV GL W ++ L +
Sbjct: 73 IAKLLEPLSREQLVALLRTAAETTPATMAAVRRAAEADPASRKLFVHGLGWGAGADDLRS 132
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
AF GE+E+ VI DK +G+S+GYGF+ ++ S ALR P I GRLA C+LA G
Sbjct: 133 AFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIGGRLAFCHLAASG 192
Query: 152 LSGVSAV-------------------------PDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
+ ++ PD QRK+++G + +V + L +F +
Sbjct: 193 PAPPTSQSQNPSSNTNANSGAANNAGSASSSQPDNMQRKIFVGNVHADVDVDRLYEYFSQ 252
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GEIEEG + +DK T + +GF YK+VE+A++A+++P + G+ + V+ A
Sbjct: 253 FGEIEEGPLGFDKTTGKPKGFALFVYKSVESARRALEEPTRNFDGKMLNVQKA 305
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D + RK+FV + + + L F GEIEEG + +DK TGK +G+ YK +ES +
Sbjct: 226 DNMQRKIFVGNVHADVDVDRLYEYFSQFGEIEEGPLGFDKTTGKPKGFALFVYKSVESAR 285
Query: 129 SALRAPSKLIDGRLAVCNLACEG 151
AL P++ DG++ A +G
Sbjct: 286 RALEEPTRNFDGKMLNVQKAIDG 308
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
LR ++ +A A E D A RKL++ GL + L + F R GE+
Sbjct: 89 LRTAAETTPATMAAVRRAAEA--------DPASRKLFVHGLGWGAGADDLRSAFSRFGEL 140
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP-PQT 249
E+ V DK + S+G+GFV +++ +A +A+ P +GGR LA + P Q+
Sbjct: 141 EDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIGGRLAFCHLAASGPAPPTSQS 200
Query: 250 QLPAA 254
Q P++
Sbjct: 201 QNPSS 205
>gi|224146847|ref|XP_002336351.1| predicted protein [Populus trichocarpa]
gi|222834777|gb|EEE73240.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Query: 761 MAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNY 820
MA+ALK FRGRG +LQERFDCLV AGLD V I+ +P +LN KDVI+ KID L N
Sbjct: 1 MARALKMFRGRGDQLQERFDCLVQAGLDYNVVSSFIKQAPMVLNQTKDVIEKKIDCLTN- 59
Query: 821 LGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFV 880
LG ++ LV+FPSY Y ERI LRF MY WLK++G +L+ ST++A S+ F++ FV
Sbjct: 60 LGCSVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAKPKLSLSTILACSDARFIKYFV 119
Query: 881 NRHPKGPEVWQTFK 894
+ HP+GP +W++ +
Sbjct: 120 DVHPEGPAMWESLR 133
>gi|115471685|ref|NP_001059441.1| Os07g0409400 [Oryza sativa Japonica Group]
gi|23617035|dbj|BAC20725.1| unknown protein [Oryza sativa Japonica Group]
gi|113610977|dbj|BAF21355.1| Os07g0409400 [Oryza sativa Japonica Group]
Length = 575
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 243/540 (45%), Gaps = 86/540 (15%)
Query: 402 EYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQR------LIARFLRYHPINEF 455
EYLH TR LP A+ ++ SP + + R L+ R L +HP+NE
Sbjct: 46 EYLHATRCLPSSHADTIAARSPRSLHAFLAGLPAVPSSLRTSAFPSLLRRHLAFHPLNEL 105
Query: 456 EPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQ 515
F ES+GL P S +LMFL+D LL L ++G +++G + + +
Sbjct: 106 PFFLESIGLPPTTRS-----DLMFLADHPSLLPAVAALAHFGFPWSRLGLLFPTV--LLR 158
Query: 516 FDVGVFQSKLHAYEM-LG-LSQSFISKVIVCSPYLLIGDVNTEFVEVLQILK-------- 565
+ S+L + E LG L ++ I + P LL D+++ V + K
Sbjct: 159 LPPDLITSRLASLEACLGPLPRAAIIAACLAFPSLLENDLSSSDRLVDDLGKVFGRLGPG 218
Query: 566 ---SMEIES--------------------------CWIEEHLLEQETFNWSMMLRFLRLF 596
S +I++ C + LE E ML+F F
Sbjct: 219 LGTSNDIDAFLGVCRRTWMFYDAGSEVGGIGDLVGCNNQRVFLELEEERIGKMLKF---F 275
Query: 597 RNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRK 656
+ LG + E++G + +P + + G + +++ L + G NE+ + + P + +
Sbjct: 276 KGLGMAGEEVGRFLLTNPMVFYLEFGDVVISVPEYLRRVGLAVNEVNAAVEKHPYVVGKN 335
Query: 657 FLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQ 716
L NL L M++D H+ L + L YL +++
Sbjct: 336 LLQNLPGVLR-----AMELD--------HWFLE---KISDGGESLRYL------FPDFVL 373
Query: 717 EN---PLELKKLALGSRVGRLPAEKERSQLLRTK--FLLDVGYVENSNEMAKALKHFRGR 771
E+ +E+++ LG + ++ A+K R+Q + K FL +GY EN K +
Sbjct: 374 EDVSYDVEIERAFLGGMI-KMKADK-RAQHIDGKLEFLKSIGYGENKIA-TKIIAVLHSN 430
Query: 772 GAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSF 831
LQERFDCL+ GL+ K +C+++ V P+ILN K ++ K++++ LGY + +L F
Sbjct: 431 RDTLQERFDCLLERGLEYKMLCQIVSVFPKILNQGKKMLNDKLNYMTKELGYSVEYLELF 490
Query: 832 PSYFNYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
P++ + E R+K R+ M WL++ G + LA +T++A S K F+ N HP P++W
Sbjct: 491 PAFLCFDLENRVKPRYTMLRWLRENGLLRRTLAPATVLANSEKRFISNLYNVHPAAPKLW 550
>gi|125558050|gb|EAZ03586.1| hypothetical protein OsI_25722 [Oryza sativa Indica Group]
Length = 575
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 247/541 (45%), Gaps = 88/541 (16%)
Query: 402 EYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFENQLDVQR------LIARFLRYHPINEF 455
EYLH TR LP A+ ++ SP + + R L+ R L +HP+NE
Sbjct: 46 EYLHATRCLPSSHADTIAARSPRSLHAFLAGLPAVPSSLRTSAFPSLLRRHLAFHPLNEL 105
Query: 456 EPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKEAREVFQ 515
F ES+GL P S +LMFL+D LL L ++G +++G + + +
Sbjct: 106 PFFLESIGLPPTTRS-----DLMFLADHPSLLPAVAALAHFGFPWSRLGLLFPTV--LLR 158
Query: 516 FDVGVFQSKLHAYEM-LG-LSQSFISKVIVCSPYLLIGDVNTEFVEVLQILK-------- 565
+ S+L + E LG L ++ I + P LL D+++ V + K
Sbjct: 159 LPPDLITSRLASLEACLGPLPRAAIIAACLAFPSLLENDLSSSDRLVDDLGKVFGRLGPG 218
Query: 566 ---SMEIES--------------------------CWIEEHLLEQETFNWSMMLRFLRLF 596
S +I++ C + LE E ML+F F
Sbjct: 219 LGTSNDIDAFLGVCRRTWMFYDAGSEVGGIGDLVGCNNQRVFLELEEERIGKMLKF---F 275
Query: 597 RNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNELCSIFLQFPQIEVRK 656
+ LG + E++G + +P + + G + +++ L + G +E+ + + P + +
Sbjct: 276 KGLGMAGEEVGRFLLTNPMVFYLEFGDVVISVPEYLRRVGLAVDEVNAAVEKHPYVVGKN 335
Query: 657 FLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQ 716
L NL L M++D H+ L + L YL +++
Sbjct: 336 LLQNLPGVLR-----AMELD--------HWFLE---KISDGGESLRYL------FPDFVL 373
Query: 717 EN---PLELKKLALGSRVGRLPAEKERSQLLRTK--FLLDVGYVENSNEMA-KALKHFRG 770
E+ +E+++ LG + ++ A+K R+Q + K FL +GY EN E+A K +
Sbjct: 374 EDVSYDVEIERAFLGGMI-KMKADK-RAQHIDGKLEFLKSIGYGEN--EIATKIIAVLHS 429
Query: 771 RGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVS 830
LQERFDCL+ GL+ K +C+++ V P+ILN K ++ K++++ LGY + +L
Sbjct: 430 NRDTLQERFDCLLERGLEYKMLCQIVSVFPKILNQGKKMLNDKLNYMTKELGYSVEYLEL 489
Query: 831 FPSYFNYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEV 889
FP++ + E+R+K R+ M WL++ G + LA +T++A S K F+ N HP P++
Sbjct: 490 FPAFLCFDLEKRVKPRYTMLRWLRENGLLRRTLAPATVLANSEKRFISNLYNVHPAAPKL 549
Query: 890 W 890
W
Sbjct: 550 W 550
>gi|147845244|emb|CAN83373.1| hypothetical protein VITISV_028295 [Vitis vinifera]
Length = 443
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 104/178 (58%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
D L+ LL+P SK QL+ +S + S+ + I+ A D HRK+FV GL W+TT ETL
Sbjct: 49 DKLQKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETL 108
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
AAF +G+IE+ V+ D+ TGK++GYGF+ +K + AL+ P K I+ R+ LA
Sbjct: 109 LAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLAS 168
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
G S D RK+Y+ + +V E L +FF + GEIE G + +D T +SRG
Sbjct: 169 MGPSPPPQSQDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGI 226
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D++ RK+++ GL + T E LL F +G+IE+ +V D++T +++G+GFV +KT + A
Sbjct: 88 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 147
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
KA+ P K + R +LA PPQ+Q
Sbjct: 148 KALKQPGKKINNRMTQSQLASMGPSPPPQSQ 178
>gi|226528557|ref|NP_001147866.1| mTERF family protein [Zea mays]
gi|195614222|gb|ACG28941.1| mTERF family protein [Zea mays]
gi|414886713|tpg|DAA62727.1| TPA: mTERF family protein [Zea mays]
Length = 574
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 239/535 (44%), Gaps = 54/535 (10%)
Query: 402 EYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFEN------QLDVQRLIARFLRYHPINEF 455
EYLH TR LP A+ ++ +SP + + + L+ R L +HP+NE
Sbjct: 45 EYLHSTRCLPSSHADSIATHSPRSLFSFLAALPTVPCSLPTAEFPALLRRHLNFHPLNEL 104
Query: 456 EPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIG-----KILKEA 510
F ES+G P P N +FLSD LL L ++G +++G +L
Sbjct: 105 PFFLESIG-GPTAAPPCF--NSIFLSDHPSLLGAVAALAHFGFPWSRLGLLYPGVLLDMP 161
Query: 511 REVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSMEIE 570
++ + V +++LH GL ++ I + P LL GD++ + ++K +
Sbjct: 162 PDLISTRLSVLEARLH-----GLPRAAIIAACLTFPSLLEGDLS----DYDLLIKDIATT 212
Query: 571 SCWIEEHLLEQETFN-WSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFE-GSGSIALTM 628
+ L + +S + R +R+F + G +GGL+ + E G IA
Sbjct: 213 FIGLGPDLRASNDIDAFSAVCRRMRMFYDAGTEFGSIGGLVGGSQRVFLELGEKRIA-ER 271
Query: 629 IGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLL----FLFEIKMKVDEIGKILRC 684
+ + G E+ L R F L+ + ++ +L + + DE+ +
Sbjct: 272 LWFFKELGMEGKEMGRFLLS----NARIFDLDFSDVVISVPRYLLNVGLAEDEVDAAVGK 327
Query: 685 HFLLVGSCTLKKTNTILAYLNVGKKRL--------------CEYIQENP---LELKKLAL 727
H +VG L+ +L + + + L E++ E+ E+++ L
Sbjct: 328 HPYVVGKNQLENLARVLRAMELEHRFLEKILAGGESLRYLSPEFVLEDDSYDAEVERAFL 387
Query: 728 GSRVGRLPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGL 787
+ K + + +FL VGY EN K + L ERFD L+ G+
Sbjct: 388 DGMAKVMVDRKAQFVDKKLEFLKSVGYGENEI-TTKVIPVINSTKDLLLERFDYLLERGV 446
Query: 788 DRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EERIKLRF 846
+ K +C ++RV P++LN KD++ K+++L LGY L +L FP++ + E R+K R+
Sbjct: 447 EYKILCRILRVFPKVLNQSKDMLNEKLNYLTEELGYSLEYLGCFPAFLCFDLENRVKPRY 506
Query: 847 LMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW-QTFKKQIYSE 900
M WL++ G + +LA +T++A S K F+ HP P++W + F +I+ +
Sbjct: 507 TMLWWLQEHGLLRKKLAPATVLANSEKRFISTLYLVHPAVPKLWLECFSSRIHMD 561
>gi|242045678|ref|XP_002460710.1| hypothetical protein SORBIDRAFT_02g033550 [Sorghum bicolor]
gi|241924087|gb|EER97231.1| hypothetical protein SORBIDRAFT_02g033550 [Sorghum bicolor]
Length = 576
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 239/532 (44%), Gaps = 57/532 (10%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSPH----FVEKL--IERFENQLDVQRLIARFLRY 449
A+A + EYLH TR L A+ ++ +SP F+ L + R ++ + R L +
Sbjct: 41 ARAVISEYLHSTRCLASSHADSIAAHSPRSLLSFLAALPTVPRSLPTSELPAHLRRHLNF 100
Query: 450 HPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIG----- 504
HP+NE F ES+G P +P L N MFLSD LL L ++G +++G
Sbjct: 101 HPLNELPFFLESIG-GPTAAAPCL--NSMFLSDHPSLLGAVAALAHFGFPWSRLGLLFPS 157
Query: 505 KILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQIL 564
+L ++ + +++LH L ++ I + P LL GD++ V + I
Sbjct: 158 VLLDVPPDLISARLSALEARLHR-----LPRAAIIAACLTFPSLLEGDLSDYDVLIKDI- 211
Query: 565 KSMEIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFE-GSGS 623
+ + W + + +S + R +R+F + G +GGL+ + E G
Sbjct: 212 -AATFKGLWPDLSS-SNDIDAFSGVCRRMRMFYDAGAEIGSIGGLVGGSQWVFLELGEKR 269
Query: 624 IALTMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLL----FLFEIKMKVDEIG 679
IA + G E+ L R F L+ + ++ +L + + DEI
Sbjct: 270 IA-ERFWFFKELGMEGKEMGRFLLS----NARIFDLDFSDVVISVPRYLRRVGLAEDEID 324
Query: 680 KILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLA---------LGSR 730
+ H +VG L+ +L + + + R E I L+ L+ +
Sbjct: 325 AAVEKHPYVVGKNQLENLPRVLRAMEL-EHRFLEKILAGGESLRYLSPEFVLEDDSYDAD 383
Query: 731 VGRLPAEKERSQLLRTK---------FLLDVGYVEN--SNEMAKALKHFRGRGAELQERF 779
V R + +L K FL VGY EN + ++ AL R L ERF
Sbjct: 384 VERAFLDGMAKVMLERKAHFVDKKLEFLKSVGYGENEITTKVIPALNSTRDL---LLERF 440
Query: 780 DCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT- 838
D L+ G++ K +C ++RV P++LN KD++ K+++L LGY L +L FP++ +
Sbjct: 441 DYLLERGVEYKILCRILRVFPKVLNQSKDMLNEKLNYLTEELGYSLEYLHCFPAFLCFDL 500
Query: 839 EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
E R K R+ M WL++ G + +LA +T++A S K F+ HP P++W
Sbjct: 501 ENRTKPRYTMLWWLQEHGLLRKKLAPATVLANSEKRFISTLYLVHPAVPKLW 552
>gi|326503326|dbj|BAJ99288.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 571
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 56/541 (10%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSP---HFVEKLIERFENQL---DVQRLIARFLRY 449
A+ A+ +YL TR LP A+ ++ +P H I + L D+ L+ R L Y
Sbjct: 37 ARTAISDYLISTRCLPSSHADSITALAPCSLHTFLAGIPAVPSTLPSSDLPSLLRRHLSY 96
Query: 450 HPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKE 509
HP+NE F ES+GL P S LMFL+D LL L ++G +G +
Sbjct: 97 HPLNELPFFLESIGLPPSTDS-----ELMFLTDHPTLLPAVAALAHFGFPWPDLGLLFPS 151
Query: 510 AREVFQFDVGVFQSKLHAYE--MLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSM 567
+ Q + ++L A E + L ++ I + SP L+ DV + V + ++
Sbjct: 152 V--LLQVPPDLISARLVALEESLRPLPRAAIIAACLVSPSLIENDVPSSAPLVDDLRRAY 209
Query: 568 EIESCWIEEHLLEQETFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALT 627
+ + + + + R +++F G +GGL+ + + E +
Sbjct: 210 ---GGFGPDLGASNDIDVFLRVCRRMQMFYEAGLKIGSIGGLVGCNQRVFLE----LKEE 262
Query: 628 MIGLLLKF----GSTRNELCSIFLQFPQIEVRKFLLNLNQCLL----FLFEIKMKVDEIG 679
IG LKF G E L P + F L+ + ++ +L + + DE+
Sbjct: 263 RIGERLKFFKRLGLAGEEAGRFLLSNPGV----FDLDFDDVMISVPEYLRRVGLADDEVD 318
Query: 680 KILRCHFLLVGSCTLKKTNTILAYLNVGKKRL--------------CEYIQENPLELKKL 725
++ H +VG L+ +L + + + L +++ E+ +++
Sbjct: 319 VAVKKHPYVVGRNRLENLPGVLLAMGLNHRFLEKISGGGESLLYLSPDFVLEDVSYDREV 378
Query: 726 --ALGSRVGRLPAEKERSQL-LRTKFLLDVGYVENSNEMAKALKHFRGRGAE-LQERFDC 781
A R+ ++ AEK + + +FL +GY EN ++A + F E L ERFD
Sbjct: 379 ERAFSDRMVKVKAEKSAQHVDTKLEFLKSIGYGEN--KIATHILPFLHSTREMLNERFDY 436
Query: 782 LVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EE 840
L+ G++ K +C M+ V P++LN K+++ K++++ LGY L +L FP+ + E
Sbjct: 437 LLERGVEYKMLCRMVSVFPKVLNQGKEMLNEKLNYMTLDLGYSLEYLDCFPALLCFDLEN 496
Query: 841 RIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW-QTFKKQIYS 899
R+K R+ M WL+ G + LA +T++A S K F+ N HP P++W + F +I
Sbjct: 497 RVKPRYAMLRWLQSYGLLKRPLAPATVLANSEKRFISNLYNVHPAAPKLWLECFSSRIRM 556
Query: 900 E 900
E
Sbjct: 557 E 557
>gi|125599923|gb|EAZ39499.1| hypothetical protein OsJ_23934 [Oryza sativa Japonica Group]
Length = 539
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 226/494 (45%), Gaps = 80/494 (16%)
Query: 442 LIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARN 501
L+ R L +HP+NE F ES+GL P S +LMFL+D LL L ++G +
Sbjct: 56 LLRRHLAFHPLNELPFFLESIGLPPTTRS-----DLMFLADHPSLLPAVAALAHFGFPWS 110
Query: 502 KIGKILKEAREVFQFDVGVFQSKLHAYEM-LG-LSQSFISKVIVCSPYLLIGDVNTEFVE 559
++G + + + + S+L + E LG L ++ I + P LL D+++
Sbjct: 111 RLGLLFPTV--LLRLPPDLITSRLASLEACLGPLPRAAIIAACLAFPSLLENDLSSSDRL 168
Query: 560 VLQILK-----------SMEIES--------------------------CWIEEHLLEQE 582
V + K S +I++ C + LE E
Sbjct: 169 VDDLGKVFGRLGPGLGTSNDIDAFLGVCRRTWMFYDAGSEVGGIGDLVGCNNQRVFLELE 228
Query: 583 TFNWSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIALTMIGLLLKFGSTRNEL 642
ML+F F+ LG + E++G + +P + + G + +++ L + G NE+
Sbjct: 229 EERIGKMLKF---FKGLGMAGEEVGRFLLTNPMVFYLEFGDVVISVPEYLRRVGLAVNEV 285
Query: 643 CSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHFLLVGSCTLKKTNTILA 702
+ + P + + L NL L M++D H+ L + L
Sbjct: 286 NAAVEKHPYVVGKNLLQNLPGVLR-----AMELD--------HWFLE---KISDGGESLR 329
Query: 703 YLNVGKKRLCEYIQEN---PLELKKLALGSRVGRLPAEKERSQLLRTK--FLLDVGYVEN 757
YL +++ E+ +E+++ LG + ++ A+K R+Q + K FL +GY EN
Sbjct: 330 YL------FPDFVLEDVSYDVEIERAFLGGMI-KMKADK-RAQHIDGKLEFLKSIGYGEN 381
Query: 758 SNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQILNMKKDVIKSKIDFL 817
K + LQERFDCL+ GL+ K +C+++ V P+ILN K ++ K++++
Sbjct: 382 KIA-TKIIAVLHSNRDTLQERFDCLLERGLEYKMLCQIVSVFPKILNQGKKMLNDKLNYM 440
Query: 818 VNYLGYPLSFLVSFPSYFNYT-EERIKLRFLMYNWLKDEGWIDGRLASSTLIAYSNKTFM 876
LGY + +L FP++ + E R+K R+ M WL++ G + LA +T++A S K F+
Sbjct: 441 TKELGYSVEYLELFPAFLCFDLENRVKPRYTMLRWLRENGLLRRTLAPATVLANSEKRFI 500
Query: 877 QQFVNRHPKGPEVW 890
N HP P++W
Sbjct: 501 SNLYNVHPAAPKLW 514
>gi|212275065|ref|NP_001130367.1| uncharacterized protein LOC100191462 [Zea mays]
gi|194688948|gb|ACF78558.1| unknown [Zea mays]
Length = 424
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 26/204 (12%)
Query: 62 IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
++ ADP RKLFV GL W +E L +AF GE+E+ VI DK +G+S+GYGF+ +
Sbjct: 4 VRRAVEADPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLF 63
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLS--GVSAVP-------------------- 159
+ S AL P I GRLA C+LA G + S P
Sbjct: 64 RSRRSALRALNRPQLQIGGRLAFCHLAASGPAPPAQSQNPISNANPNANSNSTSNASGSS 123
Query: 160 ----DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
D QRK+++G + +V + L +F + GEIEEG + +DK+T +GF YK+V
Sbjct: 124 SSQTDNIQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVYKSV 183
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLA 239
E+A++A+++P K G+T+ V+ A
Sbjct: 184 ESARRALEEPIKNFDGKTLNVQKA 207
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D A RKL++ GL E L + F R GE+E+ V DK + S+G+GFV +++ +A
Sbjct: 11 DPASRKLFVHGLGWGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSAL 70
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLP 252
+A++ P +GGR LA + P Q+Q P
Sbjct: 71 RALNRPQLQIGGRLAFCHLAASGPAPPAQSQNP 103
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D + RK+FV + + + L F GEIEEG + +DK TG+ +G+ YK +ES +
Sbjct: 128 DNIQRKIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVYKSVESAR 187
Query: 129 SALRAPSKLIDGRLAVCNLACEG 151
AL P K DG+ A +G
Sbjct: 188 RALEEPIKNFDGKTLNVQKAIDG 210
>gi|357122803|ref|XP_003563104.1| PREDICTED: uncharacterized protein LOC100821081 [Brachypodium
distachyon]
Length = 571
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 235/523 (44%), Gaps = 41/523 (7%)
Query: 396 AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIERFEN------QLDVQRLIARFLRY 449
A+ A+ +YL TR LP A+ ++ SP + + D+ L+ R L +
Sbjct: 37 ARTAVSDYLISTRCLPSSHADSIAALSPRSLLTFLAGIPAVPSTFPSSDLPSLLRRHLSF 96
Query: 450 HPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYHVLCNYGVARNKIGKILKE 509
HP+NE F ES+GL P S LMFL+D LL L ++G +++G + +
Sbjct: 97 HPLNELPFFLESIGLPPSADS-----ELMFLNDHPSLLPAVAALAHFGFPWSRLGLLFPD 151
Query: 510 AREVFQFDVGVFQSKLHAYE--MLGLSQSFISKVIVCSPYLLIGDVNTEFVEVLQILKSM 567
+ Q + ++L E + L ++ I + P L + +F +++ +
Sbjct: 152 V--LLQVPPDLISARLVVLEERLRPLVRAAIIAACLAFPSL----IENDFCSCAPLVEDL 205
Query: 568 EIESCWIEEHLLEQETFN-WSMMLRFLRLFRNLGCSDEQLGGLIRQHPGLLFEGSGSIAL 626
+ + L + + + R +++F + G S +GGL+ + + E
Sbjct: 206 IMAFGGLASDLGAINDIDVFFGVCRRMQMFYDAGMSTGSIGGLVGCNQRVFLELKEEQIG 265
Query: 627 TMIGLLLKFGSTRNELCSIFLQFPQIEVRKFLLNLNQCLLFLFEIKMKVDEIGKILRCHF 686
+ K G +E L P + F + +L ++ + DE+ ++ H
Sbjct: 266 ERLKFFKKLGLAGDEAGKFLLLNPGVFDLDFYDVVISVPEYLRKVGLAEDEVDAAVKKHP 325
Query: 687 LLVGSCTLKKTNTILAYLNVGKKRL--------------CEYIQENP---LELKKLALGS 729
+VG L+ +L + + + L +++ E+ +E+++ A
Sbjct: 326 YVVGRNRLENLPGVLRAMGLNHRFLEKISGGGENLRYLSSDFVLEDSRYDMEVER-AFLD 384
Query: 730 RVGRLPAEKERSQL-LRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLD 788
R+ ++ +K + + +FL +GY EN K L LQERFD L+ G++
Sbjct: 385 RIDKVKEDKNAQHIDSKLEFLKSIGYGENKIA-TKVLPVLHSTQELLQERFDYLLERGVE 443
Query: 789 RKDVCEMIRVSPQILNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYT-EERIKLRFL 847
+ +C ++ V P++LN +K+++ K++++ LGY L +L FP+ + E R+K R+
Sbjct: 444 YEMLCRIVSVFPKVLNQRKEMLNEKLNYMTGELGYSLEYLDCFPALLCFDLENRVKPRYA 503
Query: 848 MYNWLKDEGWIDGRLASSTLIAYSNKTFMQQFVNRHPKGPEVW 890
M WL++ G + LA +T++A S K F+ N HP P++W
Sbjct: 504 MLRWLQEYGLLKRPLAPATVLANSEKRFISNLYNVHPAAPKLW 546
>gi|67623287|ref|XP_667926.1| UBP1 interacting protein 2a [Cryptosporidium hominis TU502]
gi|54659095|gb|EAL37690.1| UBP1 interacting protein 2a [Cryptosporidium hominis]
Length = 383
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 154/348 (44%), Gaps = 50/348 (14%)
Query: 5 KKRKMEDDNILINGQDFNSSSSS--------SQD---HLRSLLDPLSKSQLVDLLSRLGS 53
K+R ME +L N Q S+ +D R+++ LSK QLVD+LS+
Sbjct: 9 KERDMESKEMLSNCQQLPCSALEFLTGEYELEEDGIVEFRNVVSLLSKEQLVDILSKSAY 68
Query: 54 QYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS 113
Y I K + PV R++ VR +++ T+ + F GEIE+ +I +K G+S
Sbjct: 69 LYNIIGNACKLIVERSPVSRRVMVRNISFQTSDKVFLNLFEKFGEIEDSTIIREK-NGRS 127
Query: 114 RGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVP-------------- 159
RGYGF+TYK ES + L + +++GR + LA + S + P
Sbjct: 128 RGYGFVTYKSSESIK-KLFNENLILNGRQLLVKLAADPFSEFTCGPIDCNKQVLESNQRL 186
Query: 160 --DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
+ ++KL+I LS T E L F +IEE V D +T +SR +GF+T+ +
Sbjct: 187 TSTIFKKKLFIRNLSESTTNESLRQAFSEFEDIEECFVMRDHNTGKSRKYGFITFNNLGD 246
Query: 218 AKKAVDDPHKTLGGRTIIVKLA----DT----HKGKPPQTQLPAAVVPVPLPLGAGY--- 266
K + P + + G+ V LA DT K P T+L + P+ P+ +GY
Sbjct: 247 MMKVLQHPERIVDGKVTFVSLAFKQKDTSNANKKSDTPATELQGS-YPLSFPVQSGYFYD 305
Query: 267 -----PQAGKAHANT----PPVGYSYPQNVPPYPTSSYTSPNTAPVPY 305
PQ NT V + V PY Y S N PY
Sbjct: 306 YYNALPQMQLDLQNTNLTSENVRNQHQMEVYPYVNQCYYSSNPCFTPY 353
>gi|66363266|ref|XP_628599.1| T8M16_190 RRM protein of possible plant origin [Cryptosporidium
parvum Iowa II]
gi|46229606|gb|EAK90424.1| T8M16_190 RRM protein of possible plant origin [Cryptosporidium
parvum Iowa II]
gi|323509079|dbj|BAJ77432.1| cgd7_4480 [Cryptosporidium parvum]
Length = 383
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 152/348 (43%), Gaps = 50/348 (14%)
Query: 5 KKRKMEDDNILINGQDFNSSS-----------SSSQDHLRSLLDPLSKSQLVDLLSRLGS 53
K+R ME +L N Q S+ R+++ LSK QLVD+LS+
Sbjct: 9 KERDMESKEMLSNCQQLPCSALEFLTGEYELEEEGIVEFRNVVSLLSKEQLVDILSKSAY 68
Query: 54 QYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS 113
Y I K + PV R++ VR +++ T+ + F GEIE+ +I +K G+S
Sbjct: 69 LYNIIGNACKLIVERSPVSRRVMVRNISFQTSDKVFLNLFEKFGEIEDSTIIREK-NGRS 127
Query: 114 RGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVP-------------- 159
RGYGF+TYK ES + L + +++GR + LA + S + P
Sbjct: 128 RGYGFVTYKSSESIK-KLFNENLILNGRQLLVKLAADPFSEFTCGPIDCNKQVMESNQRL 186
Query: 160 --DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
+ ++KL+I LS T E L F +IEE V D +T +SR +GF+T+ +
Sbjct: 187 TSTIFKKKLFIRNLSESTTNESLRQAFSEFEDIEECFVMRDHNTGKSRKYGFITFNNLGD 246
Query: 218 AKKAVDDPHKTLGGRTIIVKLA----DT----HKGKPPQTQLPAAVVPVPLPLGAGY--- 266
K + P + + G+ V LA DT K P T+L + P+ P+ +GY
Sbjct: 247 MMKVLQHPERIVDGKVTFVSLAFKQKDTSNANKKSDTPATELQGS-YPLSFPVQSGYFYD 305
Query: 267 -----PQAGKAHANT----PPVGYSYPQNVPPYPTSSYTSPNTAPVPY 305
PQ NT V + V PY Y S N PY
Sbjct: 306 YYNALPQMQLDLQNTNLTSENVRNQHQMEVYPYVNQCYYSSNPCFTPY 353
>gi|70935654|ref|XP_738883.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56515450|emb|CAH75094.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 321
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 11 DDNILINGQDFNS----SSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVA 66
+DNI I QD N S + LR L+ PLSK QL+D+L+ S + I ++
Sbjct: 37 NDNI-IEDQDLNDKKIKDEESEVEQLRRLIAPLSKEQLIDILATAASIHEDIRDKCNEAV 95
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
++ P R+L VR + ++T E F GEIE+G ++ +K G+S+GYGF+T+K++ES
Sbjct: 96 TSSPSTRRLMVRNIPFSTKDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKYIES 154
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
Q L++ L + L V +A D Q KL++ LS + L N F +
Sbjct: 155 VQKCLKSNHTLDNKDLQVRLVA-------DPFTDHYQNKLFVRNLSQKTNVTTLRNIFEK 207
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+G++EE + +D + +S+G+GF+T+ + + A K + P + + R + + A + K
Sbjct: 208 YGKLEECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKK 266
Query: 247 PQT 249
Q
Sbjct: 267 YQN 269
>gi|82753560|ref|XP_727727.1| UBP1 interacting protein 2a [Plasmodium yoelii yoelii 17XNL]
gi|23483711|gb|EAA19292.1| UBP1 interacting protein 2a [Plasmodium yoelii yoelii]
Length = 344
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 14/243 (5%)
Query: 11 DDNILINGQDFNS----SSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVA 66
+DNIL QD N S + LR L+ PLSK QL+D+L+ S + I +
Sbjct: 32 NDNIL-EDQDLNDKKIKDEESEIEQLRRLIAPLSKEQLIDILATAASIHEDIRDRCNEAV 90
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
++ P R+L VR + ++T E F GEIE+G ++ +K G+S+GYGF+T+K++ES
Sbjct: 91 TSSPSTRRLMVRNIPFSTKDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKYIES 149
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
Q L+ L + L V +A D Q KL++ LS + L N F +
Sbjct: 150 VQKCLKTTHTLDNKDLQVRLVA-------DPFTDHYQNKLFVRNLSQKTNVTTLRNIFEK 202
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+G++EE + +D + +S+G+GF+T+ + + A K + P + + R + + A + K
Sbjct: 203 YGKLEECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKK 261
Query: 247 PQT 249
Q
Sbjct: 262 YQN 264
>gi|68069479|ref|XP_676651.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56496444|emb|CAH98134.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 348
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 14/243 (5%)
Query: 11 DDNILINGQDFNS----SSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVA 66
+DNIL N Q+ N S + LR L+ PLSK QL+D+L+ S + I +
Sbjct: 36 NDNILEN-QNLNDKKIKDEESEVEQLRRLIAPLSKEQLIDILATAASIHEDIRDRCNDAV 94
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
++ P R+L VR + ++T E F GEIE+G ++ +K G+S+GYGF+T+K++ES
Sbjct: 95 TSSPSTRRLMVRNIPFSTKDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKYIES 153
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
Q L+ L + L V +A D Q KL++ LS + L N F +
Sbjct: 154 VQKCLKGSHTLDNKDLQVRLVA-------DPFTDHYQNKLFVRNLSQKTNVTTLRNIFEK 206
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+G++EE + +D + +S+G+GF+T+ + + A K + P + + R + + A + K
Sbjct: 207 YGKLEECVIIHDNEG-KSKGYGFLTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNYKK 265
Query: 247 PQT 249
Q
Sbjct: 266 YQN 268
>gi|209875595|ref|XP_002139240.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554846|gb|EEA04891.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 551
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
+ LR +L PLSK QL++LL+ + + + SV HR+L+V+ L ++ +E++
Sbjct: 54 ESLRRVLTPLSKDQLIELLAGACVDNQATLQNVLSVIYESRSHRRLYVKNLPFSVCTESV 113
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
F G++EEG V+ K GKSRGY F+TYK +ES Q A + S ++GR+ + LA
Sbjct: 114 IKLFSQFGDVEEGIVL--KRNGKSRGYAFVTYKTIESAQLACK-ESITVNGRVLMVKLAA 170
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
+ + D +RKL++ L T + L FG++GE+EE SV ESRG+GF
Sbjct: 171 DPFPFEARRSDALRRKLFVRNLGFTTTEDSLSAVFGKYGELEE-SVILRTREGESRGYGF 229
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
VT+ E+ KA+ PH + GR + V A
Sbjct: 230 VTFVNTESTMKALQQPHHLVDGRLVFVHQA 259
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+D + RKLFVR L + TT ++L A F +GE+EE +VI G+SRGYGF+T+ + EST
Sbjct: 180 SDALRRKLFVRNLGFTTTEDSLSAVFGKYGELEE-SVILRTREGESRGYGFVTFVNTEST 238
Query: 128 QSALRAPSKLIDGRLAVCNLACEG 151
AL+ P L+DGRL + A EG
Sbjct: 239 MKALQQPHHLVDGRLVFVHQAIEG 262
>gi|66357960|ref|XP_626158.1| T8M16_190-plant like protein with RRM domain [Cryptosporidium
parvum Iowa II]
gi|46227101|gb|EAK88051.1| T8M16_190-plant like protein with RRM domain [Cryptosporidium
parvum Iowa II]
Length = 600
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 16/238 (6%)
Query: 14 ILINGQDFNSSSSS------------SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEE 61
I N +D N+S + ++ R +L PLSK QLV+LL+ + I +
Sbjct: 26 INTNNEDLNTSVDTFPLGIGGLEVPHEKEDFRRVLTPLSKDQLVELLAGACIEDQKILQR 85
Query: 62 IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
+ +V HR+L+++ L ++ +E++ F G++EEG V+ K GKSRGY F+T+
Sbjct: 86 VFAVICESRSHRRLYIKNLPFSANTESVIEVFSQFGDVEEGIVL--KKDGKSRGYAFVTF 143
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
K +ES A + P + GR + LA + + D +RKL++ L E + L
Sbjct: 144 KTIESALLACKNPVSM-SGRFLMVKLAADPFPFETKRSDAIRRKLFVRNLGFETNEDSLS 202
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G++GE+EE SV + ES+G+GFVT+ + EA KA+ PH + GR + V A
Sbjct: 203 EVMGQYGELEE-SVILRTKSGESKGYGFVTFASSEATIKALQQPHHLIDGRLVFVHQA 259
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+D + RKLFVR L + T ++L +GE+EE ++ K+ G+S+GYGF+T+ E+T
Sbjct: 180 SDAIRRKLFVRNLGFETNEDSLSEVMGQYGELEESVILRTKS-GESKGYGFVTFASSEAT 238
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVS 156
AL+ P LIDGRL + A EG + V+
Sbjct: 239 IKALQQPHHLIDGRLVFVHQAIEGKTRVT 267
>gi|67615331|ref|XP_667430.1| RNA-binding protein [Cryptosporidium hominis TU502]
gi|54658566|gb|EAL37200.1| RNA-binding protein [Cryptosporidium hominis]
Length = 599
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 29 QDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSET 88
++ R +L PLSK QLV+LL+ + I + + +V HR+L+++ L ++ +E+
Sbjct: 53 KEDFRRVLTPLSKDQLVELLAGACIEDQKILQRVFAVICESRSHRRLYIKNLPFSANTES 112
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+ F G++EEG V+ K GKSRGY F+T+K +ES A + P + GR + LA
Sbjct: 113 VIEVFSQFGDVEEGIVL--KKDGKSRGYAFVTFKTIESALLACKNPVSM-SGRFLMVKLA 169
Query: 149 CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFG 208
+ + D +RKL++ L E + L G++GE+EE SV + ES+G+G
Sbjct: 170 ADPFPFETKRSDAIRRKLFVRNLGFETNEDSLSEVMGQYGELEE-SVILRTKSGESKGYG 228
Query: 209 FVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
FVT+ + EA KA+ PH + GR + V A
Sbjct: 229 FVTFASSEATIKALQQPHHLIDGRLVFVHQA 259
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+D + RKLFVR L + T ++L +GE+EE ++ K+ G+S+GYGF+T+ E+T
Sbjct: 180 SDAIRRKLFVRNLGFETNEDSLSEVMGQYGELEESVILRTKS-GESKGYGFVTFASSEAT 238
Query: 128 QSALRAPSKLIDGRLAVCNLACEG 151
AL+ P LIDGRL + A EG
Sbjct: 239 IKALQQPHHLIDGRLVFVHQAIEG 262
>gi|168061455|ref|XP_001782704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665797|gb|EDQ52469.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 125 bits (313), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/83 (67%), Positives = 65/83 (78%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPVHRKLFVRGLAW T+S L AF +GE+EE VI DK TGKSRG+GF+T+KHM+S Q
Sbjct: 2 DPVHRKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQ 61
Query: 129 SALRAPSKLIDGRLAVCNLACEG 151
AL+ PSK IDGR+ VCNLA G
Sbjct: 62 RALKEPSKNIDGRITVCNLASAG 84
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D RKL++ GL+ E ++ L F ++GE+EE V DK T +SRGFGFVT+K +++A+
Sbjct: 2 DPVHRKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQ 61
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
+A+ +P K + GR + LA
Sbjct: 62 RALKEPSKNIDGRITVCNLA 81
>gi|209879389|ref|XP_002141135.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556741|gb|EEA06786.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 408
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 34/274 (12%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
D L+ +L PLSK QLVD+L+R + + + ++ PV R++ VR +++NT+ +
Sbjct: 37 DKLKHILFPLSKEQLVDILARCAFAFDEVRKACVAIFEKSPVSRRVMVRNISFNTSDKAF 96
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA- 148
F GEI++ ++ DK+ GKSRGYGF+T+K ES + S +DGR + LA
Sbjct: 97 VDLFCTFGEIDDAIIVRDKS-GKSRGYGFVTFKSTESIHKLFDS-SLCLDGRQLLLKLAA 154
Query: 149 ---CEGLSGVSAVPD-----------------LAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
E G S P +++RKL++ LS T E L F + G
Sbjct: 155 DPYAEFTCGRSQSPKDLYERNDINDSNTSFKVISKRKLFVRNLSDTTTAEKLKEVFSQFG 214
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV------KLADTH 242
+E+ + D +T S+ GFVT+K + KA+ + + G+ + KL++ H
Sbjct: 215 NVEDCVILTDSNTGLSKRCGFVTFKNISGVMKALKQQQQIINGKVAFISLAFPQKLSNNH 274
Query: 243 -----KGKPPQTQLPAAVVPVPLPLGAGYPQAGK 271
P L PVPL +P G
Sbjct: 275 SVTINSRTPVPNTLSNLSFPVPLNYLTSHPGLGN 308
>gi|242062238|ref|XP_002452408.1| hypothetical protein SORBIDRAFT_04g025205 [Sorghum bicolor]
gi|241932239|gb|EES05384.1| hypothetical protein SORBIDRAFT_04g025205 [Sorghum bicolor]
Length = 369
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 8 KMEDDNILIN--------GQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIA 59
+++DD+ +N + S + ++ + LL+P ++ +L+DLL+ + P++
Sbjct: 25 EVDDDSTTMNPPKAEISAAVECEEVSEADEEDIGRLLEPFTRDELLDLLTDACLRDPALL 84
Query: 60 EEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
+ + A +D HR++FV GL TS L AAF G ++E + D+ATG+ RGYGF+
Sbjct: 85 ARVAASAVSDAAHRRIFVHGLGPGATSAALAAAFVPFGALDECHAVADRATGRCRGYGFV 144
Query: 120 TYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
T++ AL SK +DGR C LA L + + RKL++ + +
Sbjct: 145 TFRRRSDACRALADSSKRVDGRPVACQLA--SLGPAAPASSFSDRKLFVDNVPERAGRDD 202
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
L F + GEIEEG + D+ T RG+ YKT E +KA+D+P K G + +LA
Sbjct: 203 LRELFSKFGEIEEGPLGSDRATGLFRGYAIFVYKTPEGLRKALDEPTKVFDGCELHCRLA 262
Query: 240 DTHKGKPPQTQLPAA 254
+ K + Q PAA
Sbjct: 263 HRAR-KRKRKQAPAA 276
>gi|124506883|ref|XP_001352039.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505068|emb|CAD51850.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 388
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 119/224 (53%), Gaps = 11/224 (4%)
Query: 18 GQDFNS--SSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKL 75
G+D S S + LR L+ PLSK QL+D+L+ + I E+ ++ P R+L
Sbjct: 84 GEDNKSVKDDESEAEKLRRLIAPLSKEQLIDILATSALIHEDIREKCNEAVASSPSTRRL 143
Query: 76 FVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPS 135
VR + ++T E F GEIE+G ++ +K G+S+GYGF+T+K++ES Q L++
Sbjct: 144 MVRNIPFSTRDEQFLKYFESFGEIEDGIIVREKE-GRSKGYGFVTFKYVESVQKCLKSSH 202
Query: 136 KLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSV 195
L + L V +A D Q KL++ LS + L + F ++G++EE +
Sbjct: 203 TLDNKELQVRLVA-------DPFTDHYQNKLFVRNLSQKTNVSTLRSIFEKYGKLEECVI 255
Query: 196 AYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+D + +S+G+GF+T+ + A K + P + + R + + A
Sbjct: 256 IHDNE-GKSKGYGFLTFSSPREAFKVMQQPERIIDNRVVFLHFA 298
>gi|221054600|ref|XP_002258439.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808508|emb|CAQ39211.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 340
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 10/245 (4%)
Query: 5 KKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKS 64
+ +K D+ I N + S ++ LR L+ PLSK QL+D+L+ + I ++
Sbjct: 20 QDKKSVDEEISANDKTVKDEESEAES-LRRLIAPLSKEQLIDILATSALIHQDIRDKCNE 78
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
++ P R+L VR + ++T E F GEIE+G ++ +K G+S+GYGF+T+K +
Sbjct: 79 AVASSPSTRRLMVRNIPFSTRDEQFLKYFETFGEIEDGIIVREKE-GRSKGYGFVTFKFV 137
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES Q L++ L + L V +A D Q KL++ LS + L F
Sbjct: 138 ESVQKCLKSSHTLDNKELQVRLVA-------DPFTDHYQNKLFVRNLSQKTNVATLRGIF 190
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
++G++EE + +D + +S+G+GF+T+ + + A K + P + + R + + A +
Sbjct: 191 EKYGKLEECVIIHDNE-GKSKGYGFLTFSSPKEAFKVMQQPERIIDNRVVFLHFAVSQNY 249
Query: 245 KPPQT 249
K Q
Sbjct: 250 KKFQN 254
>gi|383139840|gb|AFG51193.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
Length = 137
Score = 118 bits (296), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 69/94 (73%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
L+ LL P SK QL+D++S + P + E I+ +A DP HRK+FVRGL W+TTSETL +
Sbjct: 43 LKKLLGPFSKEQLIDIISENAKKDPQLVENIRKLADKDPAHRKIFVRGLGWDTTSETLKS 102
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
F +GE+EE VI DK TGKS+GYGF+T+KHM+
Sbjct: 103 VFSQYGELEECTVIVDKGTGKSKGYGFVTFKHMD 136
Score = 57.0 bits (136), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
D A RK+++ GL + T+E L + F ++GE+EE +V DK T +S+G+GFVT+K ++
Sbjct: 80 DPAHRKIFVRGLGWDTTSETLKSVFSQYGELEECTVIVDKGTGKSKGYGFVTFKHMDG 137
>gi|294896748|ref|XP_002775712.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881935|gb|EER07528.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1162
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 132/269 (49%), Gaps = 52/269 (19%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
++D +R++++ K+QLV+LL+ + + + +++V ++ R+L VR +++ ++S+
Sbjct: 63 ARDDVRTIINNFEKTQLVELLAHASTISKEVRDALRAVVGSNATFRRLLVRNISFQSSSD 122
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSK---LIDGRLAV 144
T+ A G IEEG V+YD+ TG+S+G+ F+T++ +ES A+ ++ +DGR +
Sbjct: 123 TVKNALGKFGVIEEGTVVYDRHTGRSKGFAFVTFERVESACEAVSCSNQGKIYLDGRQLI 182
Query: 145 CNLACEGLSG------VSAVPDLAQ----------------------------------- 163
A + + V A P A+
Sbjct: 183 LKFAADKIDHDQQMGVVQATPSGAERDKSVEMSTSSVGGGGGGQTTGGVASSSDSANRGG 242
Query: 164 -------RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
RKL++ L+P T+E L FG++G ++E V YD +S+ + FVTY VE
Sbjct: 243 TYSNQSMRKLFVYNLAPYTTSETLREVFGKYGPMDECIVVYDS-AGKSKRYAFVTYSNVE 301
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
A +++PHKT+ GR LA G+
Sbjct: 302 DAWACLEEPHKTVDGRMTFTHLASEGSGE 330
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 117 bits (292), Expect = 4e-23, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
+ ++AD RKLF GL+++TT L + F +GEI+E V D T KSRG+GFIT+
Sbjct: 36 TTSTADAEDRKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGS 95
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
++ + A+ I G+ + +A +K++ GGL PE T E + +
Sbjct: 96 KQAVEDAIAGAPHTIKGK---------QIDPKAAKARPGAKKVFCGGLPPETTEEEIRTY 146
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
FG++G IE + DK+ N+ RGF FVTY+T AA AV P +T+ G+ VK A
Sbjct: 147 FGQYGNIEALELPVDKEKNQRRGFIFVTYETTAAADAAVKKPKQTINGKECDVKKA 202
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
++ D RKL+ GGLS + T L + F ++GEI+E +V D T +SRGFGF+T+ +
Sbjct: 37 TSTADAEDRKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGSK 96
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGK--------PPQT 249
+A + A+ T+ G+ I K A G PP+T
Sbjct: 97 QAVEDAIAGAPHTIKGKQIDPKAAKARPGAKKVFCGGLPPET 138
>gi|224134348|ref|XP_002321797.1| predicted protein [Populus trichocarpa]
gi|222868793|gb|EEF05924.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 82/129 (63%)
Query: 743 LLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDRKDVCEMIRVSPQI 802
L +T FLL +VENS+EM + LK FRGRG +LQER CLV GLD V I+ P +
Sbjct: 13 LEKTAFLLREEHVENSDEMTRFLKTFRGRGNQLQERMGCLVQTGLDYNVVSSFIKQVPMV 72
Query: 803 LNMKKDVIKSKIDFLVNYLGYPLSFLVSFPSYFNYTEERIKLRFLMYNWLKDEGWIDGRL 862
N KD ++ KID + N+LGY ++ L FP+Y Y ER+KLRF MY L+++G ++
Sbjct: 73 PNQTKDALEKKIDCMTNFLGYSVNSLEEFPAYLCYDFERVKLRFRMYIRLREKGAAKPKV 132
Query: 863 ASSTLIAYS 871
+ T++A S
Sbjct: 133 SMGTILACS 141
>gi|361070119|gb|AEW09371.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139841|gb|AFG51194.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139842|gb|AFG51195.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139843|gb|AFG51196.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139844|gb|AFG51197.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139845|gb|AFG51198.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139846|gb|AFG51199.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139847|gb|AFG51200.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139848|gb|AFG51201.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139849|gb|AFG51202.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139850|gb|AFG51203.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139851|gb|AFG51204.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139852|gb|AFG51205.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139853|gb|AFG51206.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139854|gb|AFG51207.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139855|gb|AFG51208.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139856|gb|AFG51209.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
gi|383139857|gb|AFG51210.1| Pinus taeda anonymous locus UMN_7377_01 genomic sequence
Length = 137
Score = 116 bits (291), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 68/94 (72%)
Query: 32 LRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCA 91
L+ LL P SK QL+D++S + P + E I+ +A DP HRK+FVRGL W+TTSE L +
Sbjct: 43 LKKLLGPFSKEQLIDIISENAKKDPQLVENIRKLADKDPAHRKIFVRGLGWDTTSEALKS 102
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
F +GE+EE VI DK TGKS+GYGF+T+KHM+
Sbjct: 103 VFSQYGELEECTVIVDKGTGKSKGYGFVTFKHMD 136
Score = 57.0 bits (136), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
D A RK+++ GL + T+E L + F ++GE+EE +V DK T +S+G+GFVT+K ++
Sbjct: 80 DPAHRKIFVRGLGWDTTSEALKSVFSQYGELEECTVIVDKGTGKSKGYGFVTFKHMDG 137
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 45/254 (17%)
Query: 20 DFNSSSSSSQDHLRSLLD----------PLSKSQLVDLLSRLGSQYPSIAEE-------- 61
D N+ S+++QD+ S P +Q + G Q+P A +
Sbjct: 79 DVNAQSNTAQDNATSTAPGSVPAGMPQFPFDPAQFQQYAAANGLQFPGNANQQNFGAAGG 138
Query: 62 ------------IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKA 109
S SA RK F+ GL+W+TT E L + F+ +G I + ++ D A
Sbjct: 139 VPPPPPPAPTANATSAESAGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSA 198
Query: 110 TGKSRGYGFITYKHMESTQSALRA----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK 165
TG+SRG+GF+T++ +S + L+ KLID + A+ E + K
Sbjct: 199 TGRSRGFGFLTFEDAKSVDALLKDRHVLDGKLIDPKRAISKEDQEKVG-----------K 247
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GG+ P VT E NFF + G+I + + DKDT SRGFGFVTY + A K +
Sbjct: 248 IFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNK 307
Query: 226 HKTLGGRTIIVKLA 239
+ TL G+ + VK A
Sbjct: 308 YLTLKGKAMEVKRA 321
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 45/254 (17%)
Query: 20 DFNSSSSSSQDHLRSLLD----------PLSKSQLVDLLSRLGSQYPSIAEE-------- 61
D N+ S+++QD+ S P +Q + G Q+P A +
Sbjct: 79 DVNAQSNTAQDNATSTAPGSVPAGMPQFPFDPAQFQQYAAANGLQFPGNANQQNFGAAGG 138
Query: 62 ------------IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKA 109
S SA RK F+ GL+W+TT E L + F+ +G I + ++ D A
Sbjct: 139 VPPPPPPAPTANATSAESAGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSA 198
Query: 110 TGKSRGYGFITYKHMESTQSALRA----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK 165
TG+SRG+GF+T++ +S + L+ KLID + A+ E + K
Sbjct: 199 TGRSRGFGFLTFEDAKSVDALLKDRHVLDGKLIDPKRAISKEDQEKVG-----------K 247
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GG+ P VT E NFF + G+I + + DKDT SRGFGFVTY + A K +
Sbjct: 248 IFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNK 307
Query: 226 HKTLGGRTIIVKLA 239
+ TL G+ + VK A
Sbjct: 308 YLTLKGKAMEVKRA 321
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 15/180 (8%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S +A RK F+ GL+W+TT E L + F+ +G I + ++ D ATG+SRG+GF+T++
Sbjct: 177 STETAGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFED 236
Query: 124 MESTQSALRA----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
+S + L+ KLID + A+ E + K+++GG+ P VT E
Sbjct: 237 AKSVDALLKDRHVLDGKLIDPKRAISKEDQEKVG-----------KIFVGGIDPMVTEEE 285
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
NFF + G+I + + DKDT SRGFGFVTY + A K + + TL G+ + VK A
Sbjct: 286 FDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRA 345
>gi|224284344|gb|ACN39907.1| unknown [Picea sitchensis]
Length = 536
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 10/147 (6%)
Query: 5 KKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKS 64
KKRK+E+ N + +++ LL PL+K QL D+L + + ++++
Sbjct: 10 KKRKLEESN----------TPEITEEVAAKLLVPLTKEQLADILKPAIINHSDLLDKVRQ 59
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
+++ D RKLFVRGL + TT+E+ + F HGE+ + V+ DK +GK++GYGF+TY+H+
Sbjct: 60 ISNQDISLRKLFVRGLGYETTTESFKSVFAQHGEVIDAVVVVDKISGKNKGYGFVTYRHL 119
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEG 151
+ SAL+ PSK +DGR+ V NLA G
Sbjct: 120 DGALSALQEPSKEMDGRIVVSNLAAAG 146
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 55/83 (66%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
A D + R++Y+G + ++ L +FF +G+IEEG +D++T +S+G+ + Y+T+E
Sbjct: 234 ATTDASLRRIYVGNVPDDMKPATLTSFFSNYGDIEEGPGGFDRNTGKSKGYSLILYRTIE 293
Query: 217 AAKKAVDDPHKTLGGRTIIVKLA 239
AA +A++DP K++ G + KLA
Sbjct: 294 AANRALEDPVKSIDGHQLFCKLA 316
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+ D R+++V + + TL + F +G+IEEG +D+ TGKS+GY I Y+ +E
Sbjct: 234 ATTDASLRRIYVGNVPDDMKPATLTSFFSNYGDIEEGPGGFDRNTGKSKGYSLILYRTIE 293
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGL--SGVS----AVPDLAQRKLYIGGLSPEVTTEV 179
+ AL P K IDG C LA EGL GV+ AVP+L + G +P
Sbjct: 294 AANRALEDPVKSIDGHQLFCKLAAEGLKQKGVTKQGQAVPELMDK----GDANP-----A 344
Query: 180 LLNFFGRHGEIEEGSV 195
LN ++G + G V
Sbjct: 345 SLNHVSQYGGLGHGPV 360
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D++ RKL++ GL E TTE + F +HGE+ + V DK + +++G+GFVTY+ ++ A
Sbjct: 64 DISLRKLFVRGLGYETTTESFKSVFAQHGEVIDAVVVVDKISGKNKGYGFVTYRHLDGAL 123
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
A+ +P K + GR ++ LA
Sbjct: 124 SALQEPSKEMDGRIVVSNLA 143
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 35 LLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFR 94
L P S + +DL+ ++G + + V P RK+FV GL+W+T+ + L F
Sbjct: 18 LAGPASSGRHLDLVRKVGRSSKQVEDCTAKVIQKPP--RKMFVGGLSWDTSKKDLKDYFT 75
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSG 154
GE+ + + D TG+SRG+GFI +K S + L +DGR+ A
Sbjct: 76 KFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM----- 130
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
A+ +K+++GGL+PE T E + +FG GEIE + D +N+ RGF F+T+K
Sbjct: 131 --AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKE 188
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLA 239
E KK ++ T+ G +K+A
Sbjct: 189 EEPVKKVLEKKFHTISGSKCEIKVA 213
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RK+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 54 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 113
Query: 224 DPHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 114 QKEHRLDGRVIDPKKAMAMKKDP 136
>gi|21595502|gb|AAM66107.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 343
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 30 DHLRSLLDPLSKSQLVDLL---SRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
+ LR LL P SK QLVDL+ SR+GS SI + A D HRK+FV GL W TT
Sbjct: 61 EELRELLQPYSKDQLVDLVCSASRIGS---SIYSAVVEAADRDVTHRKIFVYGLPWETTR 117
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
ETL F +GEIEE V+ DKATGK++G+GF+ +K + + AL+ P K I R A C
Sbjct: 118 ETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQ 177
Query: 147 LACEG 151
LA G
Sbjct: 178 LASMG 182
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 144 VCNLACEGLSGVSAV-----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
VC+ + G S SAV D+ RK+++ GL E T E L+ F +GEIEE +V D
Sbjct: 79 VCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVID 138
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
K T +++GFGFV +KT + AK+A+ +P K + RT +LA
Sbjct: 139 KATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 179
>gi|18399877|ref|NP_565525.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
gi|17380804|gb|AAL36089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20198218|gb|AAD25815.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|21436357|gb|AAM51348.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970870|dbj|BAD44127.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330252168|gb|AEC07262.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 343
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 30 DHLRSLLDPLSKSQLVDLL---SRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
+ LR LL P SK QLVDL+ SR+GS SI + A D HRK+FV GL W TT
Sbjct: 61 EELRELLQPYSKDQLVDLVCSASRIGS---SIYSAVVEAADRDVTHRKIFVYGLPWETTR 117
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
ETL F +GEIEE V+ DKATGK++G+GF+ +K + + AL+ P K I R A C
Sbjct: 118 ETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQ 177
Query: 147 LACEG 151
LA G
Sbjct: 178 LASMG 182
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 144 VCNLACEGLSGVSAV-----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
VC+ + G S SAV D+ RK+++ GL E T E L+ F +GEIEE +V D
Sbjct: 79 VCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVID 138
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
K T +++GFGFV +KT + AK+A+ +P K + RT +LA
Sbjct: 139 KATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 179
>gi|30681615|ref|NP_850021.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
gi|330252167|gb|AEC07261.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 347
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 30 DHLRSLLDPLSKSQLVDLL---SRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
+ LR LL P SK QLVDL+ SR+GS SI + A D HRK+FV GL W TT
Sbjct: 61 EELRELLQPYSKDQLVDLVCSASRIGS---SIYSAVVEAADRDVTHRKIFVYGLPWETTR 117
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
ETL F +GEIEE V+ DKATGK++G+GF+ +K + + AL+ P K I R A C
Sbjct: 118 ETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQ 177
Query: 147 LACEG 151
LA G
Sbjct: 178 LASMG 182
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 144 VCNLACEGLSGVSAV-----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
VC+ + G S SAV D+ RK+++ GL E T E L+ F +GEIEE +V D
Sbjct: 79 VCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVID 138
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
K T +++GFGFV +KT + AK+A+ +P K + RT +LA
Sbjct: 139 KATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 179
>gi|19574236|emb|CAD28134.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 344
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 30 DHLRSLLDPLSKSQLVDLL---SRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
+ LR LL P SK QLVDL+ SR+GS SI + A D HRK+FV GL W TT
Sbjct: 62 EELRELLQPYSKDQLVDLVCSASRIGS---SIYSAVVEAADRDVTHRKIFVYGLPWETTR 118
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
ETL F +GEIEE V+ DKATGK++G+GF+ +K + + AL+ P K I R A C
Sbjct: 119 ETLVGVFEGYGEIEECTVLIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQ 178
Query: 147 LACEG 151
LA G
Sbjct: 179 LASMG 183
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 144 VCNLACEGLSGVSAV-----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
VC+ + G S SAV D+ RK+++ GL E T E L+ F +GEIEE +V D
Sbjct: 80 VCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVLID 139
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
K T +++GFGFV +KT + AK+A+ +P K + RT +LA
Sbjct: 140 KATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 180
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 33/279 (11%)
Query: 66 ASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
S++P + RKLF+ GL + T TL + GEI + V+ D + +SRG+GF+TY
Sbjct: 15 GSSEPEYMRKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADS 74
Query: 125 ESTQSALRAPSKLIDGRLAVCNLAC--EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
+ A+ +ID R A E SG + +++ +KL++GGLS E E L N
Sbjct: 75 QMVDQAMAQRPHIIDNRTVEPKRAIPREQSSGDT---NMSVKKLFVGGLSTETEAEDLRN 131
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA--- 239
+FG++G IEE +A ++DT RGFGFVT+ ++ K V H + G+ VK A
Sbjct: 132 YFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQRHHMIKGKRTEVKKALSK 191
Query: 240 -DTHKGK-------PPQTQLPAAVV---PVPLPLGAGYPQAGKAHANTPPVGYSY---PQ 285
+ K K PP P+ P P P GY G ++ P GY++ PQ
Sbjct: 192 IEMEKAKRKDSFMGPPHNSGPSHHYRGPPAPPPHRGGYSSRGYGDSDDWP-GYAWGGQPQ 250
Query: 286 N--------VPPYPTSSYTSPNTAPVPYPTQPPISYPPI 316
+ P Y T SY+ YP Q SY P+
Sbjct: 251 SQGGPQTNAFPSYSTDSYSGWGGNSNEYP-QGYQSYQPL 288
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W TT E+L F GEI+E V+ D T +SRG+GF+TYK S + L
Sbjct: 26 KMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVDTCLEN 85
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
++D + +A A P + R K+++GGLS T E + N+F ++G+IE
Sbjct: 86 GPHILDNKTVDPKVAFP----RKAQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYGKIE 141
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT++ + K + + I K+ + K +P + L
Sbjct: 142 DAMLMFDKTTNRHRGFGFVTFENEDVVDKVCE-----IHFHEINKKMVECKKAQPKEVML 196
Query: 252 PAAVV 256
P +
Sbjct: 197 PTTLA 201
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + F +G+IE+ +++DK T + RG+GF+T+++ +
Sbjct: 114 KKIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCE 173
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 174 IHFHEINKKMVECKKA 189
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT E L FR +GE+ + ++ D ATG+SRG+GF+T+K S + ++
Sbjct: 205 KMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAVIKE 264
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ + + K+++GG+ P VT FF + G
Sbjct: 265 EHILDGKLIDPKRAIAREDQDRVG-----------KIFVGGIDPMVTEREFNEFFSKFGS 313
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I + + DKDT SRGFGF+TY + +A K + + TL G+ + VK A
Sbjct: 314 IIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAMEVKRA 363
>gi|297825067|ref|XP_002880416.1| hypothetical protein ARALYDRAFT_481072 [Arabidopsis lyrata subsp.
lyrata]
gi|297326255|gb|EFH56675.1| hypothetical protein ARALYDRAFT_481072 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 71/122 (58%)
Query: 30 DHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETL 89
+ LR LL P SK QLVDL+ SI + A D HRK+FV GL W TT ETL
Sbjct: 55 EELRELLRPYSKDQLVDLVCSAAQIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 114
Query: 90 CAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLAC 149
F +GEIEE V+ DKATGK++G+GF+ +K + + AL+ P K I R A C LA
Sbjct: 115 VDVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 174
Query: 150 EG 151
G
Sbjct: 175 MG 176
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 144 VCNLACEGLSGVSAV-----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
VC+ A G S SAV D+ RK+++ GL E T E L++ F +GEIEE +V D
Sbjct: 73 VCSAAQIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVDVFEGYGEIEECTVVID 132
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
K T +++GFGFV +KT + AK+A+ +P K + RT +LA
Sbjct: 133 KATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLA 173
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ETL F G+I + ++ D ATG+SRG+GF+T+ S L+
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKK 213
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG+L + A+P Q K +++GG++ EVT E ++F + G I
Sbjct: 214 -QHVLDGKL---------IDPKRAIPREEQDKTGKIFVGGIAAEVTEEDFTDYFSQFGTI 263
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGFVTY + +A + + + L GR++ +K A+
Sbjct: 264 IDAQLMIDKDTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSMEIKRAE 313
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
Q K++IGGL+ E T E L N+FG+ G+I + ++ D T SRGFGF+T+ + + +
Sbjct: 152 QGKMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVL 211
Query: 223 DDPHKTLGGRTIIVKLA 239
H L G+ I K A
Sbjct: 212 KKQH-VLDGKLIDPKRA 227
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+F+ GL W+TT + L F +GE+ + ++ D TGKSRG+GF+T+K +S +
Sbjct: 85 HGKMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVI 144
Query: 132 RAP----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
+ KLID + A+ + + K+++GG+ P V + +FF +
Sbjct: 145 KTDHILDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPMVNEKDFNDFFSQF 193
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
G I + + DKDT SRGFGF+TY + +A + + + TL G+++ VK A+
Sbjct: 194 GSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 246
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K F+ GL W TT E L F +GEI + ++ D ATG+SRG+GF+T+K S + L+
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKD 203
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ E + K++IGG+ P VT + FF + G+
Sbjct: 204 RHILDGKLIDPKRAISKEDQEKVG-----------KIFIGGIDPMVTEQEFDEFFSQFGK 252
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I + + DKDT SRGFGF+TY + A + + + TL G+ + VK A
Sbjct: 253 IIDCQLMIDKDTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAMEVKRA 302
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+F+ GL W+T+ + L F GE+ + ++ D ATGKSRG+GF+T+K +S + +
Sbjct: 160 HGKMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVI 219
Query: 132 RAP----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
+ KLID + A+ + + K+++GG+ P V + +FF +
Sbjct: 220 KRDHILDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPMVNEKEFHDFFSQF 268
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
G I + + DKDT SRGFGF+TY + +A + + + TL G+++ VK A+
Sbjct: 269 GSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 321
>gi|242071607|ref|XP_002451080.1| hypothetical protein SORBIDRAFT_05g023870 [Sorghum bicolor]
gi|241936923|gb|EES10068.1| hypothetical protein SORBIDRAFT_05g023870 [Sorghum bicolor]
Length = 431
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 27 SSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTS 86
S+ D +R L+DP SK +L+ +L+ + P++ + + A+A P HR+LFV GL + S
Sbjct: 58 STSDAVRRLIDPYSKPRLIAILAEAATANPALRARLGAAAAASPSHRQLFVHGLPPHADS 117
Query: 87 ETLCAAFRVHGEIEEGAVIYD-KATGK-SRGYGFITYKHMESTQSALR-APSKLIDGRLA 143
L AF G + + I D +A+G+ +GYGF+++ + + A+R AP + GR
Sbjct: 118 AALAEAFSRFGPLADCHAIADHRASGRCCKGYGFVSFASRAAARHAVREAPRVTVAGRPV 177
Query: 144 VCNLACEGLS-GVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTN 202
A G A R++Y+ ++P+ + E L FF R GE+E G +D DT
Sbjct: 178 SVQFASAGPDPSGGGGAGAAGRRVYVTNVAPDASAERLRAFFARFGELEGGPFGFDGDTG 237
Query: 203 ESR------GFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+R G+ Y+ A KAV +P++ GRT+ +LA+
Sbjct: 238 YARFGELEGGYALFVYQAAAGAAKAVQEPYRVFEGRTLHCQLAN 281
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+F+ GL W+T+ + L F GE+ + ++ D ATGKSRG+GF+T+K +S + +
Sbjct: 160 HGKMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVI 219
Query: 132 RAP----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
+ KLID + A+ + + K+++GG+ P V + +FF +
Sbjct: 220 KRDHILDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPMVNEKEFHDFFSQF 268
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
G I + + DKDT SRGFGF+TY + +A + + + TL G+++ VK A+
Sbjct: 269 GSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 321
>gi|77551814|gb|ABA94611.1| RNA recognition motif family protein [Oryza sativa Japonica Group]
Length = 415
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 127/247 (51%), Gaps = 15/247 (6%)
Query: 5 KKRKMEDDNILINGQ--DFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQY------- 55
K+RK D +G D + S SS LR LLDP SK +L+ LLS +
Sbjct: 11 KRRKPRQDPSPDSGPGPDSDCSPPSSPTSLRRLLDPYSKPRLLALLSDAAATAGAGADDD 70
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P++ I++ A A P HR+LFV GL + + L AAF G + E V+ +ATG +G
Sbjct: 71 PTLLARIRAAADASPSHRRLFVHGLPPHADAPALAAAFSRFGPLAECDVVARRATGACKG 130
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ---RKLYIGGLS 172
+GF+T+ +S +A RA ++ G +AV A + A R++Y+ ++
Sbjct: 131 FGFVTF---QSRAAARRALREVGRGGVAVAGRAVSAQYATAGAAAAASAAGRRVYVTNVA 187
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGR 232
P + E L FF GE+E G +D DT SRG Y+ E A++A+++P++ GR
Sbjct: 188 PGASAERLRAFFAGFGELEGGPFGFDADTGSSRGCALFVYRAAEDARRALEEPYRVFEGR 247
Query: 233 TIIVKLA 239
T+ +LA
Sbjct: 248 TLHCQLA 254
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 113/232 (48%), Gaps = 24/232 (10%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+ DP K+F+ GL+W T E L F GEI E V+ D T +SRG+GF+T+
Sbjct: 17 AAHDP--GKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPA 74
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
S + L +DG+ +A A P + R K+++GGLS T E + N+
Sbjct: 75 SVEKVLANGPHELDGKKIDPKIAFP----KRAHPKMVTRTKKVFVGGLSAPTTLEDVKNY 130
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G IE+ + +DK TN RGFGFVT++ + K + + I K+ + K
Sbjct: 131 FQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDKVCE-----VHFHEINNKMVECKK 185
Query: 244 GKPPQTQLPAAV-----VPVPLPLG----AGYPQAGKAHANTP--PVGYSYP 284
+P + +P +V + PLG AG+P G + P P G+ YP
Sbjct: 186 AQPKEVMMPNSVARGRGAELVWPLGALTEAGFPAYGYSRGGYPGYPTGFGYP 237
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 15/171 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT E L + F +GEI + ++ D +TG+SRG+GF+T+K + ++
Sbjct: 164 KMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIKK 223
Query: 134 P----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ + + K+++GG+ P V +FF + G
Sbjct: 224 DHILDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPLVNERDFNDFFSQFGH 272
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
I + + DKDT SRGFGF+TY + EA + + + TL G+ + VK A+
Sbjct: 273 IIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVNKYLTLKGKAMEVKRAE 323
>gi|357142788|ref|XP_003572694.1| PREDICTED: uncharacterized protein LOC100829612 [Brachypodium
distachyon]
Length = 356
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 38 PLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHG 97
P S+ +L+DLL + ++ + + A++D HR+LFV GL + S L AAF G
Sbjct: 66 PFSRGELLDLLVEACLRDSALLSRLAASAASDATHRRLFVHGLGPGSNSAALAAAFAPFG 125
Query: 98 EIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSA 157
+EE + D+ATG+ RGYGF+T++ S + AL SK + R C LA G SA
Sbjct: 126 VLEESHAVADRATGRCRGYGFVTFRRSSSARRALADASKRVGDRPVACQLASLG----SA 181
Query: 158 VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
P RKL++ + + + L FF + GEIE G + D T + YK+
Sbjct: 182 GPCPEMRKLFVDKVPAGASRDELRKFFCQFGEIEAGPLGADHATGRFHRYAIFLYKSPGG 241
Query: 218 AKKAVDDPHKTLGGRTIIVKLADTHK 243
+KA+++P K G + + A + K
Sbjct: 242 LRKALEEPRKVFDGCELHCRPAHSKK 267
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
SA D R+L++ GL P + L F G +EE D+ T RG+GFVT++
Sbjct: 92 ASAASDATHRRLFVHGLGPGSNSAALAAAFAPFGVLEESHAVADRATGRCRGYGFVTFRR 151
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+A++A+ D K +G R + +LA P
Sbjct: 152 SSSARRALADASKRVGDRPVACQLASLGSAGP 183
>gi|297836326|ref|XP_002886045.1| hypothetical protein ARALYDRAFT_480534 [Arabidopsis lyrata subsp.
lyrata]
gi|297331885|gb|EFH62304.1| hypothetical protein ARALYDRAFT_480534 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%)
Query: 29 QDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSET 88
++ ++ LL SK +LV+L+ + + + I A D R +FVRG W+TT E
Sbjct: 354 KEDIKQLLVSYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTHEN 413
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
L AAF +GEIE+ +V+ DK TG+ +GYGF+ +K + + AL+ P K + R+ VCNLA
Sbjct: 414 LKAAFETYGEIEDCSVVMDKDTGRGKGYGFVQFKTRKGAREALKRPEKRMYNRIVVCNLA 473
Query: 149 CEGLSGVSAVPDLAQ 163
+ SG D+A+
Sbjct: 474 SKKPSGAGKEQDMAE 488
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
SA D+AQR +++ G + T E L F +GEIE+ SV DKDT +G+GFV +KT
Sbjct: 390 SADRDIAQRNIFVRGFGWDTTHENLKAAFETYGEIEDCSVVMDKDTGRGKGYGFVQFKTR 449
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQA 269
+ A++A+ P K + R ++ LA + Q A V + L A +A
Sbjct: 450 KGAREALKRPEKRMYNRIVVCNLASKKPSGAGKEQDMAEPVKIDLTQMANQSEA 503
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W TT+E L F GE++E V+ D T +SRG+GF+T+K ++ L +
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++ +DG+ LA + V +K++IGGLS + E + +F + G+I E
Sbjct: 61 GAQELDGKKIDPKLAVPKRAPAKMVT--TTKKIFIGGLSTNTSEEDMKKYFSQFGKITET 118
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK T RGFGFVT+++ +A KA D + + + + VK A
Sbjct: 119 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKA 164
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 43 QLVDLLSRLGSQY-------PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRV 95
+ VD++ G+Q P +A ++ A +K+F+ GL+ NT+ E + F
Sbjct: 52 KAVDVVLNSGAQELDGKKIDPKLAVPKRAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQ 111
Query: 96 HGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGR 141
G+I E +++DKAT + RG+GF+T++ S A LI+ +
Sbjct: 112 FGKITETMLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNK 157
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL W+TT E L F +G + + ++ D ATG+SRG+GF+T++ +S ++
Sbjct: 173 KMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVIKV 232
Query: 134 P----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ + + K+++GG+ P VT + +FF ++G
Sbjct: 233 DHILDGKLIDPKRAIAREEQDRVG-----------KIFVGGIDPLVTEKEFYDFFAQYGS 281
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
I + + DKDT SRGFGF+TY + +A + + + +L GR + VK A+
Sbjct: 282 IIDAQLMVDKDTGRSRGFGFITYDSPDAVDRVTVNKYLSLKGRAMEVKRAE 332
>gi|224083320|ref|XP_002335412.1| predicted protein [Populus trichocarpa]
gi|222834134|gb|EEE72611.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 673 MKVDEIGKILRCHFLLVGSCTLKKTNTILAYLNVGKKRLCEYIQENPLELKKLALGSRV- 731
M V+ I I+ L+ S LK T+ K LC+ + ENPLEL L S V
Sbjct: 1 MGVEGIANIISTQMELLCSAALKGPVTLRRQFKDKKDSLCQILMENPLELFHLDSKSEVE 60
Query: 732 --GRLPAEKERSQLLRTKFLLDVGYVENSNEMAKALKHFRGRGAELQERFDCLVNAGLDR 789
L ++ ++L +T FLL +GYVENS+EMA+ALK FRGRG +LQERFDC V AGLD
Sbjct: 61 SSKMLSSQGPTNKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDC 120
Query: 790 KDVCEMIRVSPQILNMKKD 808
V I+ +P +LN KD
Sbjct: 121 NVVSSFIKQAPMVLNQTKD 139
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W+TT + L F GE+ + ++ D ATGKSRG+GF+T+K +S + ++
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQGD 60
Query: 135 ----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
KLID + A+ + + K+++GG+ P V + +FF + G I
Sbjct: 61 HVLDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPMVNEKEFHDFFSQFGSI 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGF+T+ + EA + + TL G+++ VK A+
Sbjct: 110 IDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAE 159
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S S DP K+F+ GL+W TT+E L F GE+ E V+ D AT ++RG+GFIT+
Sbjct: 34 SHGSQDP--GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVD 91
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
S L A +DG+ +A + V +K++IGGLS T E L +
Sbjct: 92 PSSVDKVLNAREHELDGKKIDPKVAFPKRTQAKLV--TKTKKVFIGGLSATSTLEDLKQY 149
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F +G++E+ + YDK T RGFGFVT+ + E A K + + G K+ + K
Sbjct: 150 FETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEING-----KMVECKK 204
Query: 244 GKPPQTQLP 252
+P + LP
Sbjct: 205 AQPKEVMLP 213
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P +A ++ A +K+F+ GL+ +T E L F +G++E+ ++YDKAT + RG
Sbjct: 113 PKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDLKQYFETYGKVEDAMLMYDKATQRHRG 172
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG-------LSGVSAVPDLAQRKLYI 168
+GF+T+ E I+G++ C A L+ A A R LY
Sbjct: 173 FGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAA---AARNLY- 228
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT 228
G+ PE T + R G G++ Y N GFGFVT+ + E A K +
Sbjct: 229 -GMPPE-TLLAYAQYLPRFG----GNLMYPGFGN---GFGFVTFDSDEVADKVCEIHFHE 279
Query: 229 LGGRTIIVKLA 239
+ G+ + K A
Sbjct: 280 INGKMVECKKA 290
>gi|125534915|gb|EAY81463.1| hypothetical protein OsI_36635 [Oryza sativa Indica Group]
Length = 269
Score = 104 bits (260), Expect = 2e-19, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 121/232 (52%), Gaps = 13/232 (5%)
Query: 18 GQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQY-------PSIAEEIKSVASADP 70
G D + S SS LR LLDP SK +L+ LLS + P++ I++ A A P
Sbjct: 26 GPDSDCSPPSSPTSLRRLLDPYSKPRLLALLSDAAATAGAGADDDPTLLARIRAAADASP 85
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
HR+LFV GL + + L AAF G + E V+ +ATG +G+GF+T+ +S +A
Sbjct: 86 SHRRLFVHGLPPHADAPALAAAFSRFGPLAECDVVARRATGACKGFGFVTF---QSRAAA 142
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ---RKLYIGGLSPEVTTEVLLNFFGRH 187
RA ++ G +AV A + A R++Y+ ++P + E L FF
Sbjct: 143 RRALREVGRGGVAVAGRAVSAQYATAGAAAAASAAGRRVYVTNVAPGASAERLRAFFAGF 202
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GE+E G +D DT SRG Y+ E A++A+++P++ GRT+ +LA
Sbjct: 203 GELEGGPFGFDADTGSSRGCALFVYRAAEDARRALEEPYRVFEGRTLHCQLA 254
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W+TT + L F GE+ + ++ D ATGKSRG+GF+T+K +S + ++
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQGD 60
Query: 135 ----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
KLID + A+ + + K+++GG+ P V + +FF + G I
Sbjct: 61 HVLDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPMVNEKEFHDFFSQFGSI 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGF+T+ + EA + + TL G+++ VK A+
Sbjct: 110 IDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAE 159
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S ++A RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI YK
Sbjct: 59 SQSNARDDERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKA 118
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+S + A +++ + A A P K+++GGL+ +++ E + F
Sbjct: 119 SDSIDKVVAAGEHVLNNKKVDPKRA-------KARPG----KIFVGGLTSDISDEEIKTF 167
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
FG+ G I E + +DK N+ +GF F+TY++V+ + + P +T+ G+ + VK A
Sbjct: 168 FGQFGTIVEVELPFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDVKKA 223
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+RKL++GGLS E T + L FG++GEIE +V D +T SRGF F+ YK ++ K V
Sbjct: 67 ERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSIDKVV 126
Query: 223 DDPHKTLGGRTIIVKLADTHKGK 245
L + + K A GK
Sbjct: 127 AAGEHVLNNKKVDPKRAKARPGK 149
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 39 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 98
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 99 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 151
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 152 ELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 197
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 143 AVCNLACEGL---SGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDK 199
+ C AC + G + V + K+++GGLS + + + L ++F + GE+ + ++ D
Sbjct: 14 SYCCQACRTIPRPRGDARVERERRTKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP 73
Query: 200 DTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+T SRGFGF+ +K + +K +D L GR I K A K P
Sbjct: 74 NTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDP 120
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D T K RG+ FIT+K E +
Sbjct: 119 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVK 177
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 178 KVLEKKFHTISG 189
>gi|297734588|emb|CBI16639.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 7/183 (3%)
Query: 378 SLPFSNENVSKSPFVRKE-----AQAAMLEYLHLTRNLPFMDAEHMSKNSPHFVEKLIER 432
SLP N N+S P + AQ A+ +Y H TR+LPF+ AEH+ +NS + + I +
Sbjct: 22 SLP-KNSNLSHIPSKHRSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISK 80
Query: 433 FENQLD-VQRLIARFLRYHPINEFEPFFESLGLKPCEYSPFLPLNLMFLSDDELLLENYH 491
E L + RFLRYHPINEFE FFES+G+ E S FLP N F ++D +L
Sbjct: 81 VEFSLSSFAKSFERFLRYHPINEFEFFFESIGITQKEISGFLPPNKFFFAEDGRILNAAG 140
Query: 492 VLCNYGVARNKIGKILKEAREVFQFDVGVFQSKLHAYEMLGLSQSFISKVIVCSPYLLIG 551
L +G NK+G + K +F D +L ++ GLS + + + P++L G
Sbjct: 141 ALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAFPFVLGG 200
Query: 552 DVN 554
N
Sbjct: 201 KDN 203
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+QY + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GTQYSAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D +N+ RGF F+TYK E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F G++ + + D+ TG+SRG+GFI +K S + L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+P+ + EV+ +F GEIE
Sbjct: 61 KEHKLDGRVIDPKRAL-------AMKKEPVKKVFVGGLNPDTSKEVIQEYFEEFGEIENI 113
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T + RGF F+TYK KKA+++ T+GG +K+A
Sbjct: 114 ELPQDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIA 159
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + G++ + ++ D+ T SRGFGF+ +K + +K ++
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K +P
Sbjct: 61 KEHKLDGRVIDPKRALAMKKEP 82
Score = 43.1 bits (100), Expect = 0.68, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
+PV +K+FV GL +T+ E + F GEIE + D T K RG+ FITYK +
Sbjct: 81 EPV-KKVFVGGLNPDTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFVFITYKEEACVK 139
Query: 129 SAL 131
AL
Sbjct: 140 KAL 142
>gi|385303294|gb|EIF47378.1| subunit of cleavage factor i, partial [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 13/169 (7%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W T E+L F GE+ E ++ D ATG+SRG+ F+T+K +S L+
Sbjct: 1 MFIGGLTWETDEESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSVDEVLKQ- 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEIE 191
++DG+L + A+P Q K +++GG++P+VT + ++F + G+I
Sbjct: 60 KHVLDGKL---------IDPKRAIPREEQDKTGKIFVGGIAPDVTHQEFTDYFKQFGDII 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRG+GFVTY + +A + + + GR + +K A+
Sbjct: 111 DSQLMLDKDTGKSRGYGFVTYDSADAVARVTRNKYVMFHGRQMEIKKAE 159
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G+A + T + F+ G+I + ++ DK TGKSRGYGF+TY ++ R
Sbjct: 84 KIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGYGFVTYDSADAVARVTRN 143
Query: 134 PSKLIDGR 141
+ GR
Sbjct: 144 KYVMFHGR 151
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S S DP K+F+ GL+W TT+E L F GE+ E V+ D AT ++RG+GFIT+
Sbjct: 27 SHGSQDP--GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVD 84
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
S L A +DG+ +A + V +K++IGGLS T E + +
Sbjct: 85 PSSVDKVLHARDHELDGKKIDPKVAFPKRTQAKLV--TKTKKVFIGGLSATSTLEDMKQY 142
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F +G++E+ + YDK T RGFGFVT+ + E A K + + G+ + K K
Sbjct: 143 FETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECK-----K 197
Query: 244 GKPPQTQLP 252
+P + LP
Sbjct: 198 AQPKEVMLP 206
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P +A ++ A +K+F+ GL+ +T E + F +G++E+ ++YDKAT + RG
Sbjct: 106 PKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMYDKATQRHRG 165
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+GF+T+ E I+G++ C A
Sbjct: 166 FGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 198
>gi|312373340|gb|EFR21099.1| hypothetical protein AND_17568 [Anopheles darlingi]
Length = 808
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI YK ES +
Sbjct: 53 RKLFVGGLSWETTDKELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESIDKVVA 112
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGL+ E++ + + FFG+ G I E
Sbjct: 113 AGDHIINNKKVDPKKA-----------KARHGKIFVGGLTTEISDDEIKTFFGQFGTIVE 161
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+TY +V+ + + P +T+ G+ + VK A
Sbjct: 162 VEMPFDKQKNQRKGFCFITYDSVQVVNELLKTPKQTICGKEVDVKKA 208
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L FG +G+IE +V D T SRGF F+ YK E+ K V
Sbjct: 53 RKLFVGGLSWETTDKELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESIDKVVA 112
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 113 AGDHIINNKKVDPKKAKARHGK 134
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + F G I E + +DK + +G+ FITY ++ L
Sbjct: 132 HGKIFVGGLTTEISDDEIKTFFGQFGTIVEVEMPFDKQKNQRKGFCFITYDSVQVVNELL 191
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 192 KTPKQTICGK 201
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 24/223 (10%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P + +K+ S D K+F+ GL W TT + L F +G + E ++ D ATG+SRG
Sbjct: 182 PQPQQNVKADISKDSC--KMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRG 239
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKL---YIGGLS 172
+GF+T++H S ++ ++DG++ + ++P Q K+ ++GG+
Sbjct: 240 FGFLTFEHPSSVDEVVKT-QHILDGKV---------IDPKRSIPKEEQDKIGKIFVGGIG 289
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGR 232
+V + FF + G I + + DKDT SRGFGF+TY + +A K + + G+
Sbjct: 290 TDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAVDKVCQNKYIDFKGK 349
Query: 233 TIIVKLADTH--KGKPPQTQLPAAVVPVPL-------PLGAGY 266
I VK A GKP + P P+ P+G Y
Sbjct: 350 QIEVKRAQQRHSHGKPADASNSQMLTPNPMATPGMVNPMGQMY 392
>gi|432901707|ref|XP_004076907.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 279
Score = 103 bits (257), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSSSVDKVLEQ 116
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ A RK+++GGL+PE T E + +FG GEIE
Sbjct: 117 KEHRLDGRQIDPKRAM-------AMKKEAVRKIFVGGLNPEATEEAIREYFGAFGEIETI 169
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTL-GGR 232
+ D + + RGF F+TYK + KK ++ + T+ GGR
Sbjct: 170 ELPIDPKSKKRRGFIFITYKDEASVKKCLEKKYHTIEGGR 209
Score = 56.6 bits (135), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGFV +K + K ++
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSSSVDKVLEQ 116
Query: 225 PHKTLGGRTIIVKLA 239
L GR I K A
Sbjct: 117 KEHRLDGRQIDPKRA 131
Score = 43.9 bits (102), Expect = 0.39, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+++A RK+FV GL T E + F GEIE + D + K RG+ FITYK
Sbjct: 130 RAMAMKKEAVRKIFVGGLNPEATEEAIREYFGAFGEIETIELPIDPKSKKRRGFIFITYK 189
Query: 123 HMESTQSALRAPSKLIDG 140
S + L I+G
Sbjct: 190 DEASVKKCLEKKYHTIEG 207
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 7/175 (4%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
D K+FV GL+W+T+ + L F GE+ + + +D +G+SRG+GF+ +K
Sbjct: 48 ATKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDP 107
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
S + L +DGRL A A+ +K+++GGL PE T E + +F
Sbjct: 108 SSVEKVLEQKEHRLDGRLIDPKRAM-------AMKKEPVKKIFVGGLIPEATEENIREYF 160
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G +GEIE + D +N+ RGF F+TYK +AKK +++ T+ G +KLA
Sbjct: 161 GEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKCLENKFHTIEGSRCELKLA 215
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ +D D+ SRGFGFV +K + +K ++
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLEQ 116
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K +P + ++P
Sbjct: 117 KEHRLDGRLIDPKRAMAMKKEPVKKIFVGGLIP 149
>gi|401401445|ref|XP_003881013.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
gi|325115425|emb|CBZ50980.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
Length = 434
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME--STQSA 130
RKLFV GL+ +TT+++L F+ +G++ + V++DK TG+SRG+GFIT+ E S +
Sbjct: 121 RKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPEPVSRVAD 180
Query: 131 LRAPSKLIDG-----RLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
+R +DG R A+ G A D +L++GG+S +V E L +F
Sbjct: 181 MR---HTVDGTQVEVRRAIPREEAREHGGSGADRDAG--RLFVGGISDDVNDESLRAYFR 235
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
+GEI+ +V D+ N RGFGFV ++ + A+KA+ PHK LG
Sbjct: 236 HYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAI-GPHKKLG 279
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS TT+ L +F ++G++ + V +DK T SRGFGF+T+ T E + D
Sbjct: 121 RKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPEPVSRVAD 180
Query: 224 DPHKTLGGRTIIVKLA 239
H T+ G + V+ A
Sbjct: 181 MRH-TVDGTQVEVRRA 195
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ AD +LFV G++ + E+L A FR +GEI+ V+ D+ + RG+GF+ +++ +
Sbjct: 207 SGADRDAGRLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPD 266
Query: 126 STQSALRAPSKL 137
+ A+ KL
Sbjct: 267 DAEKAIGPHKKL 278
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F +GE+ + V+ + TG+SRG+GF+T+ E+ AL
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALEN 72
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR + C S K+++GGL P +T L +FF R+G + E
Sbjct: 73 GPHTLDGRT-IDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGNVMEV 131
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+ YD++ +SRGFGF++++ A ++A D + G+ + VK A+ G
Sbjct: 132 VIMYDQEKKKSRGFGFLSFENEVAVERATTDHFVHISGKQVEVKKAEPRDGN 183
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + KL++GGLS E T E L +F R+GE+ + V + +T SRGFGFVT+ E
Sbjct: 8 DHEKGKLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVD 67
Query: 220 KAVDDPHKTLGGRTIIVK 237
+A+++ TL GRTI K
Sbjct: 68 RALENGPHTLDGRTIDPK 85
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 103 bits (257), Expect = 5e-19, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 99/184 (53%), Gaps = 23/184 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G+AW+TT E L + F +GE+ + ++ DK TG RG+GF+++ + ++A+ +
Sbjct: 46 KIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAV-S 104
Query: 134 PSKLIDGRLAVCNLACEGL--------------SGVSAVPDLA---QRKLYIGGLSPEVT 176
+ ++DGR NL + G A P +K+++GGLSP+VT
Sbjct: 105 EAHMLDGR----NLDVKKAVPREQAPAPVRAIWGGTGAGPQRQFQDIKKVFVGGLSPDVT 160
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
E +F + GEI + V D+ T SRGFGFVTY A KK + H + GR + V
Sbjct: 161 EEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLSQQHD-MEGRPMDV 219
Query: 237 KLAD 240
K A+
Sbjct: 220 KRAE 223
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GG++ T E L ++FG++GE+ + + DK+T RGFGFV++ T A + AV +
Sbjct: 46 KIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSE 105
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQ 268
H L GR + VK A P+ Q PA V + GAG PQ
Sbjct: 106 AH-MLDGRNLDVKKA------VPREQAPAPVRAIWGGTGAG-PQ 141
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+K+FV GL+ + T E A F GEI + V+ D+ TG+SRG+GF+TY + + L
Sbjct: 148 KKVFVGGLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVL 206
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S S DP K+F+ GL+W TT+E L F GE+ E V+ D AT ++RG+GFIT+
Sbjct: 35 SHGSQDP--GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVE 92
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
S L A +DG+ +A + V +K++IGGLS T E + +
Sbjct: 93 PSSVDKVLNARDHELDGKKIDPKVAFPKRTQAKLV--TKTKKVFIGGLSATSTLEDMKQY 150
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F +G++E+ + YDK T RGFGFVT+ + E A K + + G+ + K K
Sbjct: 151 FESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECK-----K 205
Query: 244 GKPPQTQLP 252
+P + LP
Sbjct: 206 AQPKEVMLP 214
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 43 QLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEG 102
Q + L + SQ+ A IK+ S D K+F+ GL W TT E L F +G + E
Sbjct: 160 QTMSQLQQTASQHEPKA--IKADLSRDI--NKMFIGGLNWETTEEGLRDYFSKYGAVAEV 215
Query: 103 AVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLA 162
++ D ATG+SRG+GF+T+++ S ++ ++DG++ + A+P
Sbjct: 216 KIMKDTATGRSRGFGFLTFENASSVDEVVKT-QHILDGKV---------IDPKRAIPREE 265
Query: 163 QRK---LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
Q K +++GG+ P+V + FF + G I + + DKDT SRGFGF+TY T +A
Sbjct: 266 QDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAVD 325
Query: 220 KAVDDPHKTLGGRTIIVKLADT---HKGKPPQTQLP 252
+ + G+ I +K A+ K K PQ P
Sbjct: 326 RVCQNKFIEFKGKQIEIKRAEPRQLQKQKQPQMTQP 361
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W T+ E L F +GE+ + V+ + TG+SRG+GF+T+ E+ + AL
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR + C S K+++GGL P +T L +FF R+G + E
Sbjct: 79 GPHTLDGRT-IDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTVMEV 137
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+ YD++ +SRGFGF++++ A ++A D + G+ + VK A+ G
Sbjct: 138 VIMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQVEVKKAEPRDGN 189
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + KL++GGLS E + E L +F R+GE+ + V + +T SRGFGFVT+ E +
Sbjct: 14 DHEKGKLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVE 73
Query: 220 KAVDDPHKTLGGRTIIVK 237
+A+++ TL GRTI K
Sbjct: 74 RALENGPHTLDGRTIDPK 91
>gi|71033517|ref|XP_766400.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353357|gb|EAN34117.1| hypothetical protein TP01_0879 [Theileria parva]
Length = 322
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F GL +TT E L A F GE+ ++ DK +G+SRG+GF+T+ ES + LR
Sbjct: 57 KIFAGGLTRSTTPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERESVNTVLR- 115
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
S IDG A LA P Q +++++GG+S ++T ++F R+G I
Sbjct: 116 KSHTIDGVEADVKLAVRKEKAKILAPQYDQTKRIFVGGVSEKITESYFRDYFARYGPIAS 175
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ D+ TN RG+GFV Y+ +E A+K+V H +L GR K A + +T +
Sbjct: 176 YNYLVDRATNRPRGYGFVIYENMEDAEKSV-GLHMSL-GRNCEAKFAQPKNSEKEETMI 232
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D K++ GGL+ T E L +F + GE+ + DK++ SRGFGFVT+ E+
Sbjct: 52 DYESLKIFAGGLTRSTTPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERESVN 111
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
+ H T+ G VKLA
Sbjct: 112 TVLRKSH-TIDGVEADVKLA 130
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 60 EEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
E+ K +A +++FV G++ T F +G I + D+AT + RGYGF+
Sbjct: 134 EKAKILAPQYDQTKRIFVGGVSEKITESYFRDYFARYGPIASYNYLVDRATNRPRGYGFV 193
Query: 120 TYKHMESTQSAL 131
Y++ME + ++
Sbjct: 194 IYENMEDAEKSV 205
>gi|326435665|gb|EGD81235.1| RNA-binding protein Musashi-1 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+ T + L F GE+ + V+ D TG++RG+GF+T++ LR
Sbjct: 427 KMFVGGLSPETNRDRLKGYFSRFGEVVDCVVMTDATTGRTRGFGFVTFRDGRCCAKVLRE 486
Query: 134 PSKLIDGR-----LAVCNLACEGLSGVSAVPDL----AQRKLYIGGLSPEVTTEVLLNFF 184
+IDGR +AV E S S+ P + RK+++GGL T E L+ FF
Sbjct: 487 RPHIIDGREVDPKMAVPREQMEQHSRSSSAPAAPRGRSARKVFVGGLPSNATDEALIGFF 546
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD----------------DPHKT 228
GEIEE V +DK T RGFGFVT+ + + A+ V +P T
Sbjct: 547 SNFGEIEEAVVIHDKQTRLPRGFGFVTFVSEQVAEHVVSLHYHDLLGKMVEVKRAEPKAT 606
Query: 229 LGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVP 288
G R+ G+ TQ V P PL AG ++ A A +S +VP
Sbjct: 607 DGNRSPSRNYRQPSHGRAASTQRYGGVPPPPLQDAAGRQRSFSARA------WSDAGHVP 660
Query: 289 PYPTSSYTSPNT 300
P T NT
Sbjct: 661 PSAAPGATPINT 672
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 31/49 (63%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
RK+FV GL N T E L F GEIEE VI+DK T RG+GF+T+
Sbjct: 526 RKVFVGGLPSNATDEALIGFFSNFGEIEEAVVIHDKQTRLPRGFGFVTF 574
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D +N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 114 ELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 159
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 93
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D + K RG+ FIT+K E +
Sbjct: 81 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVK 139
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L I G +A
Sbjct: 140 KVLEKKFHTISGSKCEIKVA 159
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 4 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 63
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 64 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 116
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+TYK + KK ++ T+ G +K+A
Sbjct: 117 ELPIDPKLNKRRGFVFITYKEEDPVKKVLEKKFHTVSGSKCEIKVA 162
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 4 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 63
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 64 KEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 96
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FITYK + +
Sbjct: 84 DPV-KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVK 142
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L + G +A
Sbjct: 143 KVLEKKFHTVSGSKCEIKVA 162
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A DP K+F+ GL+W TT E L F +GEI E V+ D T +SRG+GF+T+
Sbjct: 19 ACQDP--GKMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPA 76
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLA--QRKLYIGGLSPEVTTEVLLNF 183
S L +D ++ +A + P L +K+++GGLS T + + +
Sbjct: 77 SVDKVLANGPHELDSKVIDPKVAFPRRPNTANQPKLVTKTKKIFVGGLSASTTVDDVKQY 136
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G+IE+ + +DK T RGF FVT++ + K + + I K+ + K
Sbjct: 137 FEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCE-----IHFHEINNKMVECKK 191
Query: 244 GKPPQTQLPAAVV--------PVPLPLGAGYPQAGKAHANTP-PVGYSYP 284
+P + +P V P LP G Y +G + + P P GY +P
Sbjct: 192 AQPKEVMMPQGSVDDDLSFTLPGFLPAGFPYVYSGGSRSTYPIPTGYYFP 241
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P+ A + K V +K+FV GL+ +TT + + F G+IE+ +++DKAT + RG
Sbjct: 104 PNTANQPKLVTKT----KKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDKATQRHRG 159
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+ F+T+++ + I+ ++ C A
Sbjct: 160 FAFVTFENEDVVDKVCEIHFHEINNKMVECKKA 192
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT + L F +G++EE ++ D ATG+SRG+GF+T++ S ++
Sbjct: 123 KMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEVVKT 182
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 183 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTI 232
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + DKDT SRGFGF+TY T +A K + GR I +K A
Sbjct: 233 IDAQLMLDKDTGRSRGFGFITYDTPDAVDKVCQNKFIDFKGRKIEIKRA 281
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 KEHRLDGRLIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ + G +K+A
Sbjct: 114 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVA 159
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K ++
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 61 KEHRLDGRLIDPKKAMAMKKDP 82
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D T K RG+ FIT+K + +
Sbjct: 81 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVK 139
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L + G +A
Sbjct: 140 KVLEKKFHNVSGSKCEIKVA 159
>gi|452824817|gb|EME31817.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 345
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W T ++L A F +GE+ + ++ DK TG RG+GF+T++ +S + +
Sbjct: 32 KVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVTFQD-DSVADLVAS 90
Query: 134 PSKLIDGRLAVCNLAC-EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
S ++DGR A + +KL++GG+S + E L +F + G + +
Sbjct: 91 LSHILDGRQVEAKKAVPKAEVSTKNETTKTTKKLFVGGISSSCSDEDFLVYFQKFGAVLD 150
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ YD T +SRGFGF+T+ +VEA K P + G+ + VK+A+
Sbjct: 151 AHIMYDHQTGKSRGFGFITFCSVEAVDKVFQTPRHVIKGKVVEVKVAE 198
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 21/192 (10%)
Query: 54 QYPSIAEEIKSVASADPVHR---KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKAT 110
Q P+ EE +S P +R K+F+ GL W TT E+L F GE+ + V+ D T
Sbjct: 103 QKPAAQEEQQS-----PFNREDGKMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTT 157
Query: 111 GKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LY 167
G+SRG+GF+T+K + Q + + +DG++ + A+P Q K ++
Sbjct: 158 GRSRGFGFLTFKDPKCVQVVM-SKEHHLDGKI---------IDPKRAIPREEQEKTAKMF 207
Query: 168 IGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
+GG+ + T E +FF + G + + ++ DKDT RGFGFVT++ A + + P+
Sbjct: 208 VGGVPADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYI 267
Query: 228 TLGGRTIIVKLA 239
T+ G+ + VK A
Sbjct: 268 TIHGKPVEVKRA 279
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 46/333 (13%)
Query: 36 LDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRV 95
L PLS++ +V+ +P I S + + + RKLFV GL T L +
Sbjct: 256 LSPLSENPIVE-------AHPVIT---MSNPNCNMLERKLFVGGLNPVTDDYRLREFYSK 305
Query: 96 HGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGV 155
G + + V+ D A G+SRG+GF+TY+ + + A A IDG++ A
Sbjct: 306 FGVVTDAVVMKDIA-GRSRGFGFVTYEDPQMAEVACNARPHEIDGKIVDAKKAVPK-GDA 363
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+PD+ RK++IGGL V L ++F G+I E V DK+TN+SRGFGFVT+
Sbjct: 364 HPIPDIPVRKIFIGGLRRSVKDSDLFSYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDT 423
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTH-----KGKPPQTQLPAAVVPVPLPLGAGYPQ-- 268
++ + ++ ++ G + VK A + KP + + P + YP
Sbjct: 424 DSVDRVANETLHSICGFPVDVKKAVAKDDLNVRKKPFAARFGSDA--GPRSATSNYPHWT 481
Query: 269 --AGKAHANTPPVGYSYPQNVPP---YPTSSYTSPNTAPVPYPTQPP---------ISYP 314
G + N PP SY +PP P SY +P P+ +QPP +Y
Sbjct: 482 ANQGMTYGNAPP---SY---MPPPVAAPVGSYAAP-----PFWSQPPPVAMGFYPNQNYT 530
Query: 315 PIPLKKDPIGPIGHPATAPKRRIASILGRVSSN 347
P++++ T PK+R + R +++
Sbjct: 531 GGPVRENSAAAAATAVTDPKKRFRGSVDRGTTS 563
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P RK+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S
Sbjct: 209 PELRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDK 268
Query: 130 ALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
L +DGR+ A A+ +K+++GGL+PE T + + ++FG GE
Sbjct: 269 VLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEDKIRDYFGEFGE 321
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
IE + D TN+ RGF F+T+K E KK ++ + G +K+A
Sbjct: 322 IEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKVA 371
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RK+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K +D
Sbjct: 212 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDKVLD 271
Query: 224 DPHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 272 QKEHRLDGRVIDPKKAMAMKKDP 294
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT E F GE+ ++ D T +SRG+GFI Y+++ AL
Sbjct: 3 RKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALL 62
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+ +IDG+ + +VP R K++IGGL P + E L +FG++G +
Sbjct: 63 HATHVIDGKQ---------VEPKRSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVV 113
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
E + DK+T RGFGFV++ T E A+KA+ + G+ VK A+
Sbjct: 114 SEVELLRDKETGRLRGFGFVSFDTPEGAQKALVTKMHEINGKMAQVKKAE 163
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+SV +K+F+ GL NT+ E L F +G + E ++ DK TG+ RG+GF+++
Sbjct: 77 RSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFD 136
Query: 123 HMESTQSALRAPSKLIDGRLAVCNLA 148
E Q AL I+G++A A
Sbjct: 137 TPEGAQKALVTKMHEINGKMAQVKKA 162
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+RKL++GGLS E T E F + GE+ + D T SRGFGF+ Y+ V KA+
Sbjct: 2 ERKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKAL 61
Query: 223 DDPHKTLGGRTI 234
+ G+ +
Sbjct: 62 LHATHVIDGKQV 73
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 45 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 104
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 105 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 157
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D +N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 158 ELPMDPKSNKRRGFVFITFKEEDPVKKVLEKKFHTISGSKCEIKVA 203
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 45 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 104
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 105 KEHRLDGRVIDPKKAMAMKKDP 126
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D + K RG+ FIT+K + +
Sbjct: 125 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEDPVK 183
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L I G +A
Sbjct: 184 KVLEKKFHTISGSKCEIKVA 203
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 102 bits (253), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +GEIE V D TG+SRG+ FI YK +S +
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL+ E++ E + FFG+ G
Sbjct: 96 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGN 141
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 191
Score = 62.0 bits (149), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E + + L FG++GEIE +V D +T SRGF F+ YK+ ++ K V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 96 AGDHVINNKKVDPKKAKARHGK 117
Score = 42.0 bits (97), Expect = 1.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + E + F G I E + +DK + +G+ FIT+ + L
Sbjct: 115 HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL 174
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 175 KTPKQTISGK 184
>gi|18399023|ref|NP_565450.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|20197017|gb|AAC16468.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|330251780|gb|AEC06874.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%)
Query: 22 NSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLA 81
+S ++ ++ LL SK +LV+L+ + + + I A D R +FVRG
Sbjct: 357 DSDFEHDKEDIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFG 416
Query: 82 WNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGR 141
W+TT E L AF +GEIEE +V+ DK TG+ +GYGF+ +K + + AL+ P K + R
Sbjct: 417 WDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNR 476
Query: 142 LAVCNLACEGLSGVSAVPDLAQ 163
+ VCNLA E D+A+
Sbjct: 477 IVVCNLASEKPGKAGKEQDMAE 498
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
SA D+AQR +++ G + T E L F +GEIEE SV DKDT +G+GFV +KT
Sbjct: 400 SADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTR 459
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQA 269
+ A++A+ P K + R ++ LA GK + Q A V + L A +A
Sbjct: 460 KGAREALKRPEKRMYNRIVVCNLASEKPGKAGKEQDMAEPVNIDLTKMANQSEA 513
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 102 bits (253), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W TT E L F +GE+ + V+ + T +SRG+GF+T+K + L +
Sbjct: 17 KIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVAKVLSS 76
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR + C K+++GGL P T L +FF R+G + E
Sbjct: 77 GPHEVDGR-TIDPKVCSSRDSQQNKKAGQYPKVFLGGLPPNCTETDLRSFFSRYGTVVEV 135
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPA 253
+ YD++ +SRGFGF++++T ++ K+ + + G+ I K A+ K P +Q P
Sbjct: 136 VLMYDQEKKKSRGFGFLSFETEDSVKQVCAEHFVKINGKKIECKHAEPRDKKRP-SQGPN 194
Query: 254 AVVP 257
+ P
Sbjct: 195 SGTP 198
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D+ TG+SRG+GFI +K S + L
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 124
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+P+ + EV+ +F GEIE
Sbjct: 125 KEHKLDGRVIDPKRAL-------AMKKEPVKKVFVGGLNPDTSKEVIHEYFEAFGEIENI 177
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T + RGF F+TYK KKA+++ T+GG +K+A
Sbjct: 178 ELPQDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIA 223
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D+ T SRGFGF+ +K + +K ++
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 124
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K +P + + P
Sbjct: 125 KEHKLDGRVIDPKRALAMKKEPVKKVFVGGLNP 157
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
+PV +K+FV GL +T+ E + F GEIE + D T K RG+ FITYK +
Sbjct: 145 EPV-KKVFVGGLNPDTSKEVIHEYFEAFGEIENIELPQDPKTEKRRGFVFITYKEEACVK 203
Query: 129 SALRAPSKLIDGRLAVCNLA 148
AL + G +A
Sbjct: 204 KALENKFHTVGGSKCEIKIA 223
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 131 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D +N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 184 ELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 229
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
Score = 42.0 bits (97), Expect = 1.7, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D + K RG+ FIT+K E +
Sbjct: 151 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVK 209
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 210 KVLEKKFHTISG 221
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 131 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D +N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 184 ELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 229
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
Score = 42.0 bits (97), Expect = 1.7, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D + K RG+ FIT+K E +
Sbjct: 151 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVK 209
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 210 KVLEKKFHTISG 221
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 66 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 124
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 125 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 177
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D +N+ RGF F+T+K E KK ++ T+ G
Sbjct: 178 NPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISG 237
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 238 SKCEIKVA 245
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 87 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 146
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 147 KEHRLDGRVIDPKKAMAMKKDP 168
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E T + FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQDFKQFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + A+ P + L G+TI VK A
Sbjct: 110 IDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEVKKA 157
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T + F G + + ++ DK TG+ RG+GF+T+ + ++AL
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR 143
Query: 134 PSKLIDGRLAVCNLACEG 151
P +++ + V G
Sbjct: 144 PLEILGKTIEVKKAQPRG 161
>gi|428673104|gb|EKX74017.1| conserved hypothetical protein [Babesia equi]
Length = 359
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F GL TT+E L + F +GE+ ++ DK TGKSRG+GF+T+ + ++ ++ L
Sbjct: 20 KIFAGGLNRATTAEDLKSYFSKYGEVVHSEIVGDKVTGKSRGFGFVTFSNEDAIRAVLSK 79
Query: 134 PSKL----IDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KL +D +LAV + L P ++++GG+S +T E +F R+G
Sbjct: 80 THKLDNVVVDVKLAVRKDRAKQL----LPPKDEYSRIFVGGVSENITEEYFKEYFSRYGH 135
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
I + DKDTN RGFGFV Y+ E KA+ PH +LG
Sbjct: 136 ITSYNYIVDKDTNRPRGFGFVIYEKSEDCDKAI-GPHISLG 175
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 142 LAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDT 201
+A +LA GL+ D K++ GGL+ T E L ++F ++GE+ + DK T
Sbjct: 1 MASTDLASAGLTDS----DFETHKIFAGGLNRATTAEDLKSYFSKYGEVVHSEIVGDKVT 56
Query: 202 NESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+SRGFGFVT+ +A + + HK L + VKLA
Sbjct: 57 GKSRGFGFVTFSNEDAIRAVLSKTHK-LDNVVVDVKLA 93
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 12 DNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPV 71
D + + F + S++D +R++L K V + +L + + K +
Sbjct: 53 DKVTGKSRGFGFVTFSNEDAIRAVLSKTHKLDNVVVDVKLAVR----KDRAKQLLPPKDE 108
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+ ++FV G++ N T E F +G I I DK T + RG+GF+ Y+ E A+
Sbjct: 109 YSRIFVGGVSENITEEYFKEYFSRYGHITSYNYIVDKDTNRPRGFGFVIYEKSEDCDKAI 168
>gi|224065561|ref|XP_002301858.1| predicted protein [Populus trichocarpa]
gi|222843584|gb|EEE81131.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 101 bits (252), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G+AW+TT +TL F +GE+ + ++ DK TG+ RG+GF+ + L
Sbjct: 7 KLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSVLDPVLH- 65
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
IDGR + L L G+S + +K+++GGL VT + +F +G + +
Sbjct: 66 DKHTIDGRTVII-LPLSLLWGLSCI---GTKKIFVGGLPSTVTEDGFRQYFQSYGHVNDV 121
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
V YD+ T RGFGF+T+ + +A + L G+ + VK A P
Sbjct: 122 VVMYDQQTQRPRGFGFITFDSEDAVDNVLQKTFHELNGKLVEVKRALPKDANP 174
Score = 56.2 bits (134), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + KL++GG++ + T + L + F ++GE+ + + DK T RGFGFV +
Sbjct: 2 DSDEGKLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSVLD 61
Query: 220 KAVDDPHKTLGGRTIIV 236
+ D H T+ GRT+I+
Sbjct: 62 PVLHDKH-TIDGRTVII 77
Score = 47.8 bits (112), Expect = 0.029, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL T + F+ +G + + V+YD+ T + RG+GFIT+ ++ + L+
Sbjct: 92 KKIFVGGLPSTVTEDGFRQYFQSYGHVNDVVVMYDQQTQRPRGFGFITFDSEDAVDNVLQ 151
Query: 133 APSKLIDGRL 142
++G+L
Sbjct: 152 KTFHELNGKL 161
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 1/171 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F +GE+ + V+ + TG+SRG+GF+T+ E+ + AL
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR + C S K+++GGL P +T L +FF R+G + E
Sbjct: 80 GPHTLDGRT-IDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEV 138
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ YD++ +SRGFGF++++ A ++A + + G+ + +K A+ G
Sbjct: 139 VIMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVEIKKAEPRDG 189
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + KL++GGLS E T E L +FGR+GE+ + V + +T SRGFGFVT+ E +
Sbjct: 15 DHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVE 74
Query: 220 KAVDDPHKTLGGRTIIVK 237
+A+++ TL GRTI K
Sbjct: 75 RALENGPHTLDGRTIDPK 92
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 101 bits (252), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 114 ELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 159
Score = 58.5 bits (140), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDP 82
Score = 41.2 bits (95), Expect = 2.8, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FIT+K E +
Sbjct: 81 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 139
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 140 KVLEKKFHTISG 151
>gi|297825069|ref|XP_002880417.1| hypothetical protein ARALYDRAFT_481073 [Arabidopsis lyrata subsp.
lyrata]
gi|297326256|gb|EFH56676.1| hypothetical protein ARALYDRAFT_481073 [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%)
Query: 14 ILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHR 73
I+ + +S ++ ++ LL+ SK +L++L+ + + + + A D R
Sbjct: 102 IVTTNNESDSDFEFDKEDVKHLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQR 161
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+FVRGL W+TT E L AAF V GEIEE +V+ DK TG+++G+GF+ +K + ++ALR
Sbjct: 162 NIFVRGLGWDTTHENLKAAFEVFGEIEECSVVMDKDTGRAKGFGFVLFKTCKGARAALRN 221
Query: 134 PSKLIDGRLAVCNLACEGLSG 154
P K + R +C+LA +G
Sbjct: 222 PEKRMYNRTVICSLAKPSTAG 242
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
SA D +QR +++ GL + T E L F GEIEE SV DKDT ++GFGFV +KT
Sbjct: 153 SADRDSSQRNIFVRGLGWDTTHENLKAAFEVFGEIEECSVVMDKDTGRAKGFGFVLFKTC 212
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQA---GKA 272
+ A+ A+ +P K + RT+I LA P+ Q P V + L A + + G
Sbjct: 213 KGARAALRNPEKRMYNRTVICSLAKPSTAGKPREQ-PVESVKIDLSRTANHSEMVLPGID 271
Query: 273 HANTPPVGYSYPQNVPPY 290
A G+ QN+P Y
Sbjct: 272 LAYGLDKGHQQQQNMPMY 289
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 151 KEHRLDGRLIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 203
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ + G +K+A
Sbjct: 204 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVA 249
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K ++
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 151 KEHRLDGRLIDPKKAMAMKKDP 172
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D T K RG+ FIT+K + +
Sbjct: 171 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVK 229
Query: 129 SAL 131
L
Sbjct: 230 KVL 232
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D +N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 114 LPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 158
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 92
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D + K RG+ FIT+K E +
Sbjct: 80 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVK 138
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L I G +A
Sbjct: 139 KVLEKKFHTISGSKCEIKVA 158
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 101 bits (251), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +GEIE V D TG+SRG+ FI YK +S +
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL+ E++ E + FFG+ G
Sbjct: 96 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGN 141
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 191
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E + + L FG++GEIE +V D +T SRGF F+ YK+ ++ K V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 96 AGDHVINNKKVDPKKAKARHGK 117
Score = 42.0 bits (97), Expect = 1.7, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + E + F G I E + +DK + +G+ FIT+ + L
Sbjct: 115 HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL 174
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 175 KTPKQTISGK 184
>gi|344246933|gb|EGW03037.1| Heterogeneous nuclear ribonucleoprotein A/B [Cricetulus griseus]
Length = 211
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+TYK + KK ++ T+ G +K+A
Sbjct: 114 LPIDPKLNKRRGFVFITYKEEDPVKKVLEKKFHTVSGSKCEIKVA 158
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDP 81
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FITYK + +
Sbjct: 80 DPV-KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVK 138
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L + G +A
Sbjct: 139 KVLEKKFHTVSGSKCEIKVA 158
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 19/225 (8%)
Query: 15 LINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRK 74
+ NG+DF+ ++ Q+ L+S D ++ + GS A+ + A RK
Sbjct: 9 MENGEDFSQDVNADQNFLQSQGDQMN--------GQNGSGDAPPADSGSADAPGRDDDRK 60
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
LFV GL+W TT + L F +GEIE V D TG+SRG+ FI + + E+ + A
Sbjct: 61 LFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAAG 120
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+I+ + V + G K+++GGL+ E++ + + NFF ++G I E
Sbjct: 121 EHIINNK-KVDPKKAKARHG----------KIFVGGLTNELSDDDIKNFFSQYGTIIEVE 169
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ + + VK A
Sbjct: 170 MPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIKDKEVDVKKA 214
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVL 180
+ + + Q+ L++ ++G+ + A SG + P RKL++GGLS E T + L
Sbjct: 17 QDVNADQNFLQSQGDQMNGQNGSGD-APPADSGSADAPGRDDDRKLFVGGLSWETTDKEL 75
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ FG++GEIE +V D +T SRGF F+ + EA K V + + + K A
Sbjct: 76 RDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAAGEHIINNKKVDPKKAK 135
Query: 241 THKGK 245
GK
Sbjct: 136 ARHGK 140
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 19/225 (8%)
Query: 15 LINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRK 74
+ NG+DF+ ++ Q+ L+S D ++ + GS A+ + A RK
Sbjct: 9 MENGEDFSQDVNADQNFLQSQGDQMN--------GQNGSGDAPPADSGSADAPGRDDDRK 60
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
LFV GL+W TT + L F +GEIE V D TG+SRG+ FI + + E+ + A
Sbjct: 61 LFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAAG 120
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+I+ + V + G K+++GGL+ E++ + + NFF ++G I E
Sbjct: 121 EHIINNK-KVDPKKAKARHG----------KIFVGGLTNELSDDDIKNFFSQYGTIIEVE 169
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ + + VK A
Sbjct: 170 MPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIKDKEVDVKKA 214
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVL 180
+ + + Q+ L++ ++G+ + A SG + P RKL++GGLS E T + L
Sbjct: 17 QDVNADQNFLQSQGDQMNGQNGSGD-APPADSGSADAPGRDDDRKLFVGGLSWETTDKEL 75
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ FG++GEIE +V D +T SRGF F+ + EA K V + + + K A
Sbjct: 76 RDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAAGEHIINNKKVDPKKAK 135
Query: 241 THKGK 245
GK
Sbjct: 136 ARHGK 140
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKAPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKAP 152
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 65 VASADPVH-----RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
VAS P K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GFI
Sbjct: 9 VASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFI 68
Query: 120 TYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
T+ S L + +DG+ +A + V +K+++GGLS T E
Sbjct: 69 TFADPASVDKVLAQGTHELDGKKIDPKVAFPRRTHPKMV--TRTKKIFVGGLSAPTTLED 126
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ N+F + G IE+ + +DK TN RGFGFVT+++ + K + + I K+
Sbjct: 127 VKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMV 181
Query: 240 DTHKGKPPQTQLPA 253
+ K +P + LPA
Sbjct: 182 ECKKAQPKEVMLPA 195
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T + FF + G
Sbjct: 171 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQDFKQFFMQFGR 219
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + L G+TI VK A
Sbjct: 220 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEVKKA 268
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGRL A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHRLDGRLIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ + G +K+A
Sbjct: 114 LPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVA 158
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 61 EHRLDGRLIDPKKAMAMKKDP 81
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D T K RG+ FIT+K + +
Sbjct: 80 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVK 138
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L + G +A
Sbjct: 139 KVLEKKFHNVSGSKCEIKVA 158
>gi|58332392|ref|NP_001011015.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|82234092|sp|Q640A2.1|HNRDL_XENTR RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|52139122|gb|AAH82729.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|89268223|emb|CAJ82429.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 101 bits (251), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 86
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSPE T E + +FG GEIE
Sbjct: 87 KEHKLDGKLIDPKRA-KALKGKEP-----PKKVFVGGLSPETTEEQIKQYFGGFGEIENI 140
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF FVTY E KK ++ +G +K+A
Sbjct: 141 ELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKVA 186
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 152 LSGVSAVPDLAQR-------------KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
++G A PD + K++IGGLS + + + L + R GE+ + ++ D
Sbjct: 1 MTGFGATPDFNEGSKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTD 60
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
T SRGFGFV +K + K ++ L G+ I K A KGK PP+ + P
Sbjct: 61 PVTGRSRGFGFVLFKDAVSVDKVLETKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 120
Score = 40.0 bits (92), Expect = 6.5, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ +P +K+FV GL+ TT E + F GEIE + D T + RG+ F+TY
Sbjct: 102 KALKGKEP-PKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYT 160
Query: 123 HMESTQSALRA 133
E + L +
Sbjct: 161 GEEPVKKLLES 171
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
S A E S DP K+F+ GL+W TT+E L F GE+ E V+ D AT ++RG+
Sbjct: 30 SPASEDGSSGCNDP--GKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGF 87
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVT 176
GFIT+ S + L +DG+ +A + + + +K++IGGLS T
Sbjct: 88 GFITFADPASVEKVLAHDQHELDGKKIDPKVAFPKRAQPKMI--IKTKKVFIGGLSATST 145
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
E + N+F ++G++E+ + +DK T RGFGF+T+ + + K + + G+ +
Sbjct: 146 LEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVEC 205
Query: 237 KLADTHKGKPPQTQLP 252
K K +P + LP
Sbjct: 206 K-----KAQPKEVMLP 216
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
VHRK+F+ GL + TT E+L A F GEI + V+ D T +SRG+GFITY A
Sbjct: 16 VHRKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDDA 75
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
ID R+ A + RKL+IGG+ + T + L +F +G +
Sbjct: 76 QNNRPHTIDSRVVETKRAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYGNV 135
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKA-VDDPHKTLGGRTIIVKLA 239
+ S+ DK T + RGFGFV + + K ++ PHK + G+ + VK A
Sbjct: 136 QNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLNAPHK-INGKQLDVKKA 184
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 40 SKSQLVD---------LLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLC 90
SK+ +VD + SR+ ++A + A RKLF+ G+ + T + L
Sbjct: 67 SKAHMVDDAQNNRPHTIDSRVVETKRAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLR 126
Query: 91 AAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA-LRAPSKLIDGRLAV 144
F +G ++ +++ DKATGK RG+GF+ + + L AP K+ +L V
Sbjct: 127 EYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLNAPHKINGKQLDV 181
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 131 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D +N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 184 ELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 229
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D + K RG+ FIT+K E +
Sbjct: 151 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVK 209
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L I G +A
Sbjct: 210 KVLEKKFHTISGSKCEIKVA 229
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 100 bits (250), Expect = 3e-18, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 14/181 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ GL+ TT + L F+V G++ + V+ D ATG++RG+GF+TY+ S L
Sbjct: 1 KLFIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAH 60
Query: 134 PSKLIDGR-----LAVCNLACEGL----SGVSAVPDLAQ-----RKLYIGGLSPEVTTEV 179
++DGR AV E S A P A RK+++GGL P T E+
Sbjct: 61 RPHVVDGREVDPKRAVPRQEMESSPRSSSATRAKPRSASFTHHVRKVFVGGLPPTATNEM 120
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
L +F G +EE + +DK T RGFGFVT++ A K V + G+ + VK A
Sbjct: 121 LHRYFSHFGGVEEAVIIHDKQTRTPRGFGFVTFEDPIIADKVVSVHYHEFYGKMVEVKRA 180
Query: 240 D 240
+
Sbjct: 181 E 181
Score = 46.6 bits (109), Expect = 0.059, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
RK+FV GL T+E L F G +EE +I+DK T RG+GF+T++
Sbjct: 105 RKVFVGGLPPTATNEMLHRYFSHFGGVEEAVIIHDKQTRTPRGFGFVTFE 154
>gi|340377267|ref|XP_003387151.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Amphimedon
queenslandica]
Length = 403
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 114/243 (46%), Gaps = 27/243 (11%)
Query: 65 VASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
VAS D + KLF+ L+ +T+ ETL A F+ G I E ++ D TGKSRG+GFIT+K
Sbjct: 44 VASEDSAQQQTKLFIGALSNDTSEETLEAYFKKFGVILECTIMKD-GTGKSRGFGFITFK 102
Query: 123 HMESTQSALRAPS--------KLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPE 174
S Q L A + K+ID + AV G P R++++GGLS +
Sbjct: 103 DANSIQCILEAHAESPIIIDDKMIDPKPAVPK------RGNKPTPASQIRRIFVGGLSSD 156
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
+ + FF G +EE + YDK TN RGFGFVT++ V A K L + +
Sbjct: 157 TDEDDMKEFFEVFGPVEEVQLMYDKHTNRHRGFGFVTFEKVGPAAKVCSIQFHDLKKKRV 216
Query: 235 IVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYS--YPQNVPPYPT 292
VK+A T + Q A V Y Q A + YS YP P YP
Sbjct: 217 EVKVAQTKEALAHQADKARAAV--------SYNQHNYAAGSPAAFNYSPTYPSFFPHYPM 268
Query: 293 SSY 295
+ Y
Sbjct: 269 AYY 271
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 188
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPN 299
PP T+ LP + L +G GYP + G YP P Y SY P+
Sbjct: 189 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY------GRGYPGFAPSY---SYQFPD 239
Query: 300 TAPV 303
P+
Sbjct: 240 YLPI 243
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%)
Query: 162 AQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA 221
+ K++IGGLS + + + L ++F + GEI E V D T SRGFGFVT+ + K
Sbjct: 15 SSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 74
Query: 222 VDDPHKTLGGRTIIVKLADTHKGKP 246
+ PH L +TI K+A + +P
Sbjct: 75 LAQPHHELDSKTIDPKVAFPRRAQP 99
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 31 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 90
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 91 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 146
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 147 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 201
Query: 252 PA 253
PA
Sbjct: 202 PA 203
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 119 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 178
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 179 IHFHEINNKMVECKKA 194
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 729 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 788
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 789 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 848
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 849 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 895
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKAPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKAP 152
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV L +N S L F G +E VIYDK TG+SRG+GF+T ++ ++A +
Sbjct: 93 KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152
Query: 134 PSKL-IDGRLAVCNLAC--EGLSGVSAVP----------DLAQRKLYIGGLSPEVTTEVL 180
+ ++GR N + S S P L +LY+G LS V L
Sbjct: 153 FNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLAL 212
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLA 239
+FF G++ + V YD+++ SRGFGFVTY + E + A+D + L GR I V +A
Sbjct: 213 ESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVA 272
Query: 240 DTH 242
+
Sbjct: 273 EAR 275
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV L +N S L F G +E VIYDK TG+SRG+GF+T +E ++A +
Sbjct: 91 KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150
Query: 134 PSKL-IDGRLAVCNLA--CEGLSGVSAVPDLAQ-----RKLYIGGLSPEVTTEVLLNFFG 185
+ +DGR N + S S P + ++Y+G LS V L F
Sbjct: 151 FNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNRVYVGNLSWNVDNLALETLFR 210
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADT 241
G + + V YD+D+ SRGFGFVTY + E A+D + L GR I V +A+
Sbjct: 211 EKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEA 267
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 100 bits (249), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 12/184 (6%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
V+ K+F+ GL+W T +E L F +GEI E +++D T +SRG+GF+T+ ++ +
Sbjct: 2 VNSKMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKV 61
Query: 131 LRA-PSKL----IDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
L++ P KL ID ++A + L + +K+++GG++ TTE + +F
Sbjct: 62 LQSGPHKLDDKNIDAKVAYPKKQRQKLVTRT-------KKVFVGGIATNTTTEDITKYFE 114
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
G+IE+ + +DK T RGFGFV +++ ++A KA + + + + VK A +
Sbjct: 115 TFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKKAQPKEVM 174
Query: 246 PPQT 249
QT
Sbjct: 175 HSQT 178
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
+ K++IGGLS TE L +F ++GEI E + +D T SRGFGFVT+ + +K
Sbjct: 1 MVNSKMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEK 60
Query: 221 AVDD-PHKTLGGRTIIVKLA 239
+ PHK L + I K+A
Sbjct: 61 VLQSGPHK-LDDKNIDAKVA 79
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 104 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 159
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 160 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 214
Query: 252 PA 253
PA
Sbjct: 215 PA 216
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 192 IHFHEINNKMVECKKA 207
>gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
D K+FV GL+W+T+ + L F G++ + + +D +G+SRG+GF+ +K
Sbjct: 48 ATKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDP 107
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
S + L+ +DGRL A A+ +K+++GGL+PE T E + +F
Sbjct: 108 SSVEKVLQQKEHRLDGRLIDPKRAM-------AMKKEPVKKIFVGGLNPEATEETIREYF 160
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GEIE + D + + RGF F+TYK +AKK ++ T+ G +KLA
Sbjct: 161 GAFGEIENIDLPLDPKSKKRRGFIFITYKEEASAKKCLEKKFHTVEGSRCELKLA 215
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + G++ + ++ +D D+ SRGFGFV +K + +K +
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLQQ 116
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K +P + + P
Sbjct: 117 KEHRLDGRLIDPKRAMAMKKEPVKKIFVGGLNP 149
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 151 KEHRLDGRLIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 203
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ + G +K+A
Sbjct: 204 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVA 249
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K ++
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 151 KEHRLDGRLIDPKKAMAMKKDP 172
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 100 bits (249), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +GEIE V D TG+SRG+ FI YK +S +
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL+ E++ E + FFG+ G
Sbjct: 96 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGN 141
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 191
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E + + L FG++GEIE +V D +T SRGF F+ YK+ ++ K V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 96 AGDHVINNKKVDPKKAKARHGK 117
Score = 41.6 bits (96), Expect = 2.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + E + F G I E + +DK + +G+ FIT+ + L
Sbjct: 115 HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL 174
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 175 KTPKQTISGK 184
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 100 bits (249), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +GEIE V D TG+SRG+ FI YK +S +
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL+ E++ E + FFG+ G
Sbjct: 96 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGN 141
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 191
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E + + L FG++GEIE +V D +T SRGF F+ YK+ ++ K V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 96 AGDHVINNKKVDPKKAKARHGK 117
Score = 41.6 bits (96), Expect = 2.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + E + F G I E + +DK + +G+ FIT+ + L
Sbjct: 115 HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL 174
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 175 KTPKQTISGK 184
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 100 bits (249), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 131 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 184 ELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 229
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
Score = 40.8 bits (94), Expect = 3.9, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FIT+K E +
Sbjct: 151 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 209
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 210 KVLEKKFHTISG 221
>gi|444317072|ref|XP_004179193.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
gi|387512233|emb|CCH59674.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
Length = 623
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P+ E +++ S D K+F+ GL W TT + L F +G + + ++ D TGKSRG
Sbjct: 155 PASTEHVRADLSKDSC--KMFIGGLNWETTEDGLRDYFNKYGNVVDLKIMKDNNTGKSRG 212
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLS 172
+GF+T++ S ++ ++DG++ + A+P Q K ++IGG+
Sbjct: 213 FGFLTFEKSSSVDEVVKT-QHILDGKV---------IDPKRAIPREEQDKTGKIFIGGIG 262
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGR 232
+V + FF ++G I + + DKDT SRGFGFVTY + +A + G+
Sbjct: 263 ADVRPKEFEEFFAKYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQHKFIEFKGK 322
Query: 233 TIIVKLADTHKGKPPQTQ 250
I +K A +P QTQ
Sbjct: 323 QIEIKRAQPRHNQPRQTQ 340
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT E L F GEI + ++ D ATG+SRG+GF+T+K + ++
Sbjct: 172 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 231
Query: 134 P----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ + + K++IGG+ P V+ +FF + G
Sbjct: 232 DHILDGKLIDPKRAISREDQDRVG-----------KIFIGGIDPMVSENEFNDFFSKFGT 280
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I + + DKDT SRGFGF+T+ + +A + + TL G+ + VK A
Sbjct: 281 IIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKFLTLKGKAMEVKRA 330
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S DP K+F+ GL+ TTSE L F+ +GE+ E ++ D T +SRG+GF+T+
Sbjct: 74 SNDP--GKMFIGGLSPTTTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMC 131
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
+ L A ++D + LA SG + ++++IGG++ + T E L +F +
Sbjct: 132 VEKVLEAAPHILDFKKIDPKLAVPRKSGQNTKISTKTKRVFIGGVATQTTNEELSEYFSQ 191
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G++E + DK TN RGFGFVT+++ E+A+K + L + + K A
Sbjct: 192 FGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKKA 244
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
++FV L ++ S L F G +E VIYDK TG+SRG+GF+T ++ ++A+
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAVEQ 143
Query: 134 -PSKLIDGRLAVCNLACEGLSGVSAV--PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++DGR N S+ P ++Y+G LS V L N F GE+
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDPSSQRGPRGDANRVYVGNLSWGVDNSALANLFSEQGEV 203
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQT 249
E + YD+++ SRGFGFVTY + E + A+ + L GR I V +A++ KPP+
Sbjct: 204 LEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAES---KPPRR 260
Query: 250 QL 251
Q
Sbjct: 261 QF 262
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 104 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 159
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 160 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 214
Query: 252 PA 253
PA
Sbjct: 215 PA 216
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 192 IHFHEINNKMVECKKA 207
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 90 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 200
Query: 252 PA 253
PA
Sbjct: 201 PA 202
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 178 IHFHEINNKMVECKKA 193
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 100 bits (248), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 136 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 188
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 189 ELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
GSQ + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 77 GSQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 135
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S L +DGR+ A A+ +K+++GGL
Sbjct: 136 RSRGFGFILFKESASVDKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 188
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T + + +FG GEIE + D TN+ RGF F+T+K + KK ++ +GG
Sbjct: 189 NPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVGG 248
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 249 SKCEIKVA 256
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K +D
Sbjct: 98 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQ 157
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 158 KEHRLDGRVIDPKKAMAMKKDP 179
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL + TT ++L F GEI + V+ D T KSRG+GFITYK A+R
Sbjct: 13 RKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAMR 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+ IDGR A + + + +K+++GG+ + + + L ++F ++G IE
Sbjct: 73 SRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIES 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V DKDT + RGF FVT+ + K V + T+ VK A
Sbjct: 133 VDVISDKDTGKKRGFAFVTFDDHDPVDKIVGLKYHTINDHKSEVKKA 179
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 34 SLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAF 93
S++D +S+ + R ++A E A + +K+FV G+ +T+ + L F
Sbjct: 65 SMVDDAMRSRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYF 124
Query: 94 RVHGEIEEGAVIYDKATGKSRGYGFITY 121
+G IE VI DK TGK RG+ F+T+
Sbjct: 125 SKYGSIESVDVISDKDTGKKRGFAFVTF 152
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 188
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYPQNVP 288
PP T+ LP + L +G GYP G+ + P GY +P +P
Sbjct: 189 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPDYLP 242
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 41 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 99
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 100 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 152
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 153 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 212
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 213 SKCEIKVA 220
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 62 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 121
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 122 KEHRLDGRVIDPKKAMAMKKDP 143
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 89 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 148
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 149 KEHRLDGRVIDPKKA-------MAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 201
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 202 ELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 247
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 89 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 148
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 149 KEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 181
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT E+L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E T + FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQDFKQFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ A +KA+ P + L G+ I VK A
Sbjct: 110 VDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSRPLEIL-GKPIEVKKA 157
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T + F G + + ++ DK TG+ RG+GF+T+ + + AL
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSR 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT E L + F GE+ + ++ D TGKSRG+GF+T++ +S ++
Sbjct: 161 KMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEVIKT 220
Query: 134 P----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ + + K+++GG+ P V + +FF + G
Sbjct: 221 DHILDGKLIDPKRAIAREEQDKVG-----------KIFVGGIDPMVNEKEFHDFFSQFGS 269
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
I + + DKD+ SRGFGF+T+ + +A + + TL G+ + VK A+
Sbjct: 270 IIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTVNKFLTLKGKAMEVKRAE 320
>gi|148235301|ref|NP_001084608.1| heterogeneous nuclear ribonucleoprotein D-like-B [Xenopus laevis]
gi|82237179|sp|Q6NU14.1|HNDLB_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-B;
Short=hnRNP D-like B; Short=hnRNP DL-B
gi|46249880|gb|AAH68788.1| MGC81335 protein [Xenopus laevis]
Length = 291
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 36 LDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADP----VHRKLFVRGLAWNTTSETLCA 91
L +++S LV LSRL ++ ++P + K+F+ GL+W+T+ + L
Sbjct: 3 LSEITRSTLVSTLSRL----------LRRHKESNPDFFLIRSKMFIGGLSWDTSKKDLTE 52
Query: 92 AFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG 151
GE+ + + D TG+SRG+GF+ +K S L +DG+L A +
Sbjct: 53 YLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLETKEHKLDGKLIDPKRA-KA 111
Query: 152 LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVT 211
L G +K+++GGLSPE T E + +FG GEIE + D TNE RGF FVT
Sbjct: 112 LQGKEP-----PKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVT 166
Query: 212 YKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
Y E +K ++ +G +K A
Sbjct: 167 YTDEEPVQKLLESRFHQIGTGKCEIKAA 194
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 159 PD--LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
PD L + K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K
Sbjct: 27 PDFFLIRSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAV 86
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
+ K ++ L G+ I K A +GK PP+ + P
Sbjct: 87 SVDKVLETKEHKLDGKLIDPKRAKALQGKEPPKKVFVGGLSP 128
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT E+L A F GE+ E V+ D +TG+SRG+GF+T+K + + +
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVM-VK 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P Q K +++GG+S + T + FF G +
Sbjct: 60 EHYLDGKI---------IDPKRAIPREEQEKTAKMFVGGVSQDCTEDEFREFFSAFGRVI 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ ++ DKDT RGFGFVT+++ A + A+ P+ + + I VK A T KG
Sbjct: 111 DATLMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKRA-TPKG 162
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ + T + F G + + ++ DK TG+ RG+GF+T++ + ++A+
Sbjct: 84 KMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQ 143
Query: 134 P 134
P
Sbjct: 144 P 144
>gi|351704017|gb|EHB06936.1| Heterogeneous nuclear ribonucleoprotein A/B, partial
[Heterocephalus glaber]
Length = 261
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAI 113
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 114 ELPMDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTISGSKCEIKVA 159
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 93
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 17/228 (7%)
Query: 16 INGQDFNSSS-SSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRK 74
I GQ +S++ +++D S D +++Q S AEE D K
Sbjct: 108 IRGQALSSATWDNAEDGENSKNDNYNENQSALTGSGAMESNEDNAEETSPFNRED---GK 164
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT ++L F GE+ + V+ D TG+SRG+GF+T+K+ + +
Sbjct: 165 MFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKE 224
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEIE 191
L DG++ + A+P Q K +++GG+ + T E NFF + G +
Sbjct: 225 HHL-DGKI---------IDPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVL 274
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVTY+ A + + P+ T+ G+ + VK A
Sbjct: 275 DATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRA 322
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|403221237|dbj|BAM39370.1| uncharacterized protein TOT_010000827 [Theileria orientalis strain
Shintoku]
Length = 326
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D K+F GL TT+E L + F G++ E V+ DK TG+SRG+GF+T+ +S Q
Sbjct: 52 DYESNKIFAGGLCRTTTAEQLRSYFESFGKVTETEVVKDKITGRSRGFGFVTFASNDSVQ 111
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNFFGRH 187
L + D ++ V LA P Q +++++GG++ VT ++FGR+
Sbjct: 112 RVLSQEHTVNDVQVEV-KLAVRKEKSKILAPKYDQTKRIFVGGIAENVTESYFKDYFGRY 170
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
G+I + DK TN+ RG+GFV Y+ V+ A+K++ H +LG
Sbjct: 171 GQISSHNFLMDKRTNKPRGYGFVIYENVDDAEKSI-GQHPSLG 212
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D K++ GGL T E L ++F G++ E V DK T SRGFGFVT+ + ++ +
Sbjct: 52 DYESNKIFAGGLCRTTTAEQLRSYFESFGKVTETEVVKDKITGRSRGFGFVTFASNDSVQ 111
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
+ + H T+ + VKLA
Sbjct: 112 RVLSQEH-TVNDVQVEVKLA 130
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 114 LPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 158
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 92
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FIT+K E +
Sbjct: 80 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 138
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L I G +A
Sbjct: 139 KVLEKKFHTISGSKCEIKVA 158
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 100 bits (248), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 136 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 188
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 189 ELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 100 bits (248), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 136 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 188
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 189 ELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|242069255|ref|XP_002449904.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
gi|241935747|gb|EES08892.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
Length = 450
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T + L F+ +GE+EE V+ D+ATG+SRG+GFI + + +
Sbjct: 7 KLFIGGISWDTNEDHLLKYFKKYGEVEEAIVMRDRATGRSRGFGFIMFADPAVAKHVI-M 65
Query: 134 PSKLIDGRL-----AVCNLACEGLSGVSAVPDLAQR-----KLYIGGLSPEVTTEVLLNF 183
+IDGR+ A+ L+ + QR K+++GGL+ VT E ++
Sbjct: 66 EKHMIDGRMVEAKKAIARDDHHSLNNIHGSAHGLQRPKHRKKIFVGGLASNVTKEDVIKH 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F + G I + V YD T RGFGF+TY + +A +A+ + L G+ + VK A
Sbjct: 126 FKQFGTIIDVVVVYDHHTQRPRGFGFITYDSEDAVHRALIKTFQKLKGKMVEVKRA 181
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 70 PVHRK-LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
P HRK +FV GLA N T E + F+ G I + V+YD T + RG+GFITY ++
Sbjct: 102 PKHRKKIFVGGLASNVTKEDVIKHFKQFGTIIDVVVVYDHHTQRPRGFGFITYDSEDAVH 161
Query: 129 SALRAPSKLIDGRL 142
AL + + G++
Sbjct: 162 RALIKTFQKLKGKM 175
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
Query: 65 VASADPVH-----RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
VAS P K+F+ GL+W T+ E+L F +G+I E V+ D AT +SRG+GFI
Sbjct: 109 VASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFI 168
Query: 120 TYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTT 177
T+ S L + +DG+ +A A P + R K+++GGLS T
Sbjct: 169 TFTDPASVDKVLAQGTHELDGKKIDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTL 224
Query: 178 EVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVK 237
E + ++F + G IE+ + +DK TN RGFGFVT+++ + K + + I K
Sbjct: 225 EDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNK 279
Query: 238 LADTHKGKPPQTQLPA 253
+ + K +P + LPA
Sbjct: 280 MVECKKAQPKEVMLPA 295
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 90 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 200
Query: 252 PA 253
PA
Sbjct: 201 PA 202
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 178 IHFHEINNKMVECKKA 193
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 188
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPN 299
PP T+ LP + L +G GYP + G YP P Y SY P+
Sbjct: 189 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY------GRGYPGFAPSY---SYQFPD 239
Query: 300 TAPV 303
P+
Sbjct: 240 YLPI 243
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S S DP K+F+ GL+W TT+E L F GE+ E V+ D AT ++RG+GFIT+
Sbjct: 38 SHGSQDP--GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVD 95
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
S L +DG+ +A + V +K++IGGLS T E + +
Sbjct: 96 PSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLV--TKTKKVFIGGLSATSTLEDMKQY 153
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F +G++E+ + +DK T RGFGFVT+ + E A K + + G+ + K K
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECK-----K 208
Query: 244 GKPPQTQLP 252
+P + LP
Sbjct: 209 AQPKEVMLP 217
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 56 PSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRG 115
P +A ++ A +K+F+ GL+ +T E + F +G++E+ +++DKAT + RG
Sbjct: 117 PKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRG 176
Query: 116 YGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+GF+T+ E I+G++ C A
Sbjct: 177 FGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 10 RKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 69
Query: 133 A----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
K+ID + A+ E S K+++GG+S E T + FF + G
Sbjct: 70 KEHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQEFKEFFTQFG 118
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 119 RVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEVKKA 168
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 11/168 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV L+W TT + L F GEIE +V D A+G+SRG+ FI +K +ES + +
Sbjct: 33 RKLFVGRLSWETTDKELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFKDVESIEKVMA 92
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ C+ + A K+++GGL E + E + NFFG+ G I E
Sbjct: 93 AGDHIIN---------CKKIDPKKA--KARHGKIFVGGLDVETSEEDIRNFFGQFGTILE 141
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ +DK N+ + F F+T+++ + + P +T+ G+ + VK A+
Sbjct: 142 VELPFDKQKNQQKNFCFITFESEQVTNDLLKQPKQTINGKEVDVKKAN 189
Score = 41.6 bits (96), Expect = 1.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL T+ E + F G I E + +DK + + + FIT++ + T L
Sbjct: 112 HGKIFVGGLDVETSEEDIRNFFGQFGTILEVELPFDKQKNQQKNFCFITFESEQVTNDLL 171
Query: 132 RAPSKLIDGR 141
+ P + I+G+
Sbjct: 172 KQPKQTINGK 181
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 50 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 108
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 109 RSRGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 161
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 162 NPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISG 221
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 222 SKCEIKVA 229
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKDP 152
>gi|269063722|emb|CAS85146.1| squid, variant G [Blattella germanica]
Length = 274
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL P+++ + + +FF ++G
Sbjct: 119 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGT 164
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 119 AGDHVINNKKVDPKKAKARHGK 140
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL-R 132
++FV L ++ S L F G +E VIYDK TG+SRG+GF+T +E + A+ +
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAV----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
++DGR N S+ P ++Y+G LS V L N F G
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDANRVYVGNLSWGVDNSALANLFSEQG 203
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPP 247
E+ E + YD+++ SRGFGFVTY + E + A+ + L GR I V +A++ KPP
Sbjct: 204 EVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAES---KPP 260
Query: 248 QTQ 250
+ Q
Sbjct: 261 RQQ 263
>gi|84998348|ref|XP_953895.1| RNA-binding (SR) protein [Theileria annulata]
gi|65304893|emb|CAI73218.1| RNA-binding (SR) protein, putative [Theileria annulata]
Length = 303
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F GL +TT E L F +GE+ ++ DK TG+SRG+GF+T+ +S + LR
Sbjct: 29 KIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGFGFVTFADRDSVNTVLRK 88
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
K IDG A LA P Q +++++GG+S ++T ++F R+G I
Sbjct: 89 VHK-IDGVEADVKLAVRKEKSKILAPQYDQTKRIFVGGVSEKITESYFRDYFARYGPITS 147
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ D+ TN RG+GFV Y+ +E A+K++ H +L GR K A+
Sbjct: 148 YNYLVDRATNRPRGYGFVIYENMEDAEKSI-GMHLSL-GRNCEAKFAE 193
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D K++ GGL+ T E L +F ++GE+ + DK+T SRGFGFVT+ ++
Sbjct: 24 DYESLKIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGFGFVTFADRDSVN 83
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
+ HK + G VKLA
Sbjct: 84 TVLRKVHK-IDGVEADVKLA 102
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+++FV G++ T F +G I + D+AT + RGYGF+ Y++ME + ++
Sbjct: 119 KRIFVGGVSEKITESYFRDYFARYGPITSYNYLVDRATNRPRGYGFVIYENMEDAEKSI 177
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL P+++ + + +FF ++G
Sbjct: 119 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGT 164
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 119 AGDHVINNKKVDPKKAKARHGK 140
Score = 45.8 bits (107), Expect = 0.11, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 60 EEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
EEI S +S +P KLFV GL TTSE L + F GEI+E V+ D +SRG+GF+
Sbjct: 33 EEI-SASSNEPC--KLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFV 89
Query: 120 TYKHMESTQSALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPE 174
T+ L+ SK ID +LAV C+ +SA +K++IGG++
Sbjct: 90 TFTDYNGVIKVLKQENHILDSKKIDPKLAVPKSICQP-EKISA----RTKKIFIGGIATS 144
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
T E + +F R+GE+E + DK TN RGFGFVT+ + A++ + + + +
Sbjct: 145 STVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQICQIHYHNINNKMV 204
Query: 235 IVKLA 239
K A
Sbjct: 205 EAKKA 209
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL-R 132
++FV L ++ S L F G +E VIYDK TG+SRG+GF+T +E + A+ +
Sbjct: 82 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 141
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAV----PDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
++DGR N S+ P ++Y+G LS V L N F G
Sbjct: 142 FNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDANRVYVGNLSWGVDNSALANLFSEQG 201
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPP 247
E+ E + YD+++ SRGFGFVTY + E + A+ + L GR I V +A++ KPP
Sbjct: 202 EVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAES---KPP 258
Query: 248 QTQ 250
+ Q
Sbjct: 259 RQQ 261
>gi|348535473|ref|XP_003455225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 332
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D+ TG+SRG+GFI +K S + L
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVEKVLEQ 134
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL+P+ + EV+ +FG GEIE
Sbjct: 135 KEHRLDGRQIDPKKAM-------AMKKDPVKKIFVGGLNPDTSKEVIEEYFGTFGEIETI 187
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T + RGF F+TYK KK ++ + +GG +K+A
Sbjct: 188 ELPQDPKTEKRRGFVFITYKEEAPVKKVMEKKYHNVGGSKCEIKIA 233
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D+ T SRGFGF+ +K + +K ++
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVEKVLEQ 134
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 135 KEHRLDGRQIDPKKAMAMKKDP 156
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
DPV +K+FV GL +T+ E + F GEIE + D T K RG+ FITYK
Sbjct: 155 DPV-KKIFVGGLNPDTSKEVIEEYFGTFGEIETIELPQDPKTEKRRGFVFITYKE 208
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 28/230 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 188
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP 284
PP T+ LP + L +G GYP G+ + P GY +P
Sbjct: 189 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFP 238
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 59 AEEIKSVASADPVH-----RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS 113
A+ + VAS P K+F+ GL+W T+ E+L F +G+I E V+ D T +S
Sbjct: 3 AQNQEIVASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRS 62
Query: 114 RGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSP 173
RG+GFIT+ S L + +DG+ +A + V +K+++GGLS
Sbjct: 63 RGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMV--TRTKKIFVGGLSA 120
Query: 174 EVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRT 233
T E + N+F + G IE+ + +DK TN RGFGFVT+++ + K + +
Sbjct: 121 PTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHE 175
Query: 234 IIVKLADTHKGKPPQTQLPA 253
I K+ + K +P + LPA
Sbjct: 176 INNKMVECKKAQPKEVMLPA 195
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 90 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 200
Query: 252 PA 253
PA
Sbjct: 201 PA 202
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 178 IHFHEINNKMVECKKA 193
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 114 LPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 158
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 92
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FIT+K E +
Sbjct: 80 DPV-KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 138
Query: 129 SALRAPSKLIDGRLAVCNLA 148
L I G +A
Sbjct: 139 KVLEKKFHTISGSKCEIKVA 158
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F +GE+ + V+ + TG+SRG+GF+T+ ++ AL
Sbjct: 19 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALEN 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR + C S K+++GGL P +T L +FF R+G + E
Sbjct: 79 GPHTLDGRT-IDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEV 137
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ YD++ +SRGFGF++++ A ++A + + G+ + +K A+ G
Sbjct: 138 VIMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPRDG 188
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + KL++GGLS E T E L +FGR+GE+ + V + +T SRGFGFVT+ +
Sbjct: 14 DHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVD 73
Query: 220 KAVDDPHKTLGGRTIIVK 237
+A+++ TL GRTI K
Sbjct: 74 RALENGPHTLDGRTIDPK 91
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 65 VASADPVH-----RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
VAS P K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GFI
Sbjct: 9 VASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFI 68
Query: 120 TYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
T+ S L + +DG+ +A + V +K+++GGLS T E
Sbjct: 69 TFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMV--TRTKKIFVGGLSAPTTLED 126
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ N+F + G IE+ + +DK TN RGFGFVT+++ + K + + I K+
Sbjct: 127 VKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMV 181
Query: 240 DTHKGKPPQTQLPA 253
+ K +P + LPA
Sbjct: 182 ECKKAQPKEVMLPA 195
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
+ + P KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++
Sbjct: 21 ATGNTSPSPSKLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQE 80
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
S L P +DG+ + + + SA +K+++GG+ + + + + +
Sbjct: 81 AASVDKVLAVPVHTLDGK----RIDPKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAY 136
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +E+ + D+ T RGFGFVT+ + EA ++ D T+ + + K A
Sbjct: 137 FAQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKVECKRA---- 192
Query: 244 GKPPQTQLPAAVVPVPLPLG 263
Q AV PL LG
Sbjct: 193 ------QPKEAVAAAPLALG 206
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 114 LPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVA 158
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 92
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 40 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 99
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 100 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 155
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 156 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 210
Query: 252 PA 253
PA
Sbjct: 211 PA 212
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 128 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 187
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 188 IHFHEINNKMVECKKA 203
>gi|550458|gb|AAA68014.1| ribonucleoprotein [Gallus gallus]
gi|1095499|prf||2109229A RNA-binding protein
Length = 285
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GF +K S + L
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKVLEQ 133
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 134 KEHRLDGRLIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 186
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+++K + KK ++ + G +K+A
Sbjct: 187 ELPMDPKTNKRRGFVFISFKEEDPVKKVLEKKFHNVSGSKCEIKVA 232
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF +K + +K ++
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKVLEQ 133
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 134 KEHRLDGRLIDPKKAMAMKKDP 155
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D T K RG+ FI++K + +
Sbjct: 154 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFISFKEEDPVK 212
Query: 129 SAL 131
L
Sbjct: 213 KVL 215
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 10/165 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++WNT E+L F+ +G + + V+ D T +SRG+GF+T+ +S L +
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 134 PSKLIDGRLAVCNLACEGLSGV----SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
G VC+ + + S +KL++GGL+ + + + N+F + GE
Sbjct: 61 ------GPHVVCDREIDPKRAIPRSSSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGE 114
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
IE+ D+DT RGFGF+T+KT EAA+ + + T+ G +
Sbjct: 115 IEDALCQRDRDTGRPRGFGFITFKTEEAAESVLRQQYHTIDGNRV 159
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 66 ASADPVH---RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+S+DP +KLF+ GLA + +++ F GEIE+ D+ TG+ RG+GFIT+K
Sbjct: 79 SSSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALCQRDRDTGRPRGFGFITFK 138
Query: 123 HMESTQSALRAPSKLIDG 140
E+ +S LR IDG
Sbjct: 139 TEEAAESVLRQQYHTIDG 156
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
KL++GG+S E L ++F R+G + + V D T SRGFGFVT+ A K+V D
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTF----ADPKSVTD 56
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGA 264
+ G + + D + P + PA+ L LG
Sbjct: 57 VLSS-GPHVVCDREIDPKRAIPRSSSDPASTTIKKLFLGG 95
>gi|395816803|ref|XP_003781879.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Otolemur
garnettii]
Length = 532
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 38 PLSKSQLVDLLSRLGSQYPSIAEEIKSVASADP-VHRKLFVRGLAWNTTSETLCAAFRVH 96
P S ++ +S +G+ AE K AS D K+F+ GL+W+T+ L
Sbjct: 75 PADSSTTMEDMSEVGN-IEEFAEGSKINASKDQQTDGKMFIGGLSWDTSKRDLTEYLSRF 133
Query: 97 GEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVS 156
GE+ + + D +G+SRG+GF+ +K S L +DG+L +
Sbjct: 134 GEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDKVLELKEHKLDGKL---------IDPQR 184
Query: 157 AVPDLAQ---RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYK 213
A P + +K+++GGLSP+ + E + ++FG GEIE + D+ TNE RGF FVTY
Sbjct: 185 AKPLKEKEPPKKVFVGGLSPDTSKEQIKDYFGAFGEIENIELPRDRKTNERRGFCFVTYT 244
Query: 214 TVEAAKKAVDDPHKTLGGRTIIVKLA 239
E KK ++ + +G +K+A
Sbjct: 245 EGEPVKKLLESRYHHIGSGKCEIKVA 270
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + L + R GE+ + + D + SRGFGFV +K + K ++
Sbjct: 111 KMFIGGLSWDTSKRDLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDKVLEL 170
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
L G KL D + KP + + P V V
Sbjct: 171 KEHKLDG-----KLIDPQRAKPLKEKEPPKKVFV 199
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 55 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 166
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG+ GEIE + D N+ RGF F+T+K + KK ++ T+ G
Sbjct: 167 NPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSG 226
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 227 SKCEIKVA 234
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+G+ V + G K+++GGLS E++ E + NFF + G I +
Sbjct: 114 ANDHIINGK-KVDPKKAKARHG----------KIFVGGLSTELSDEDIKNFFSQFGTIVD 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 163 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKA 209
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + G+ + K A GK
Sbjct: 111 IMSANDHIINGKKVDPKKAKARHGK 135
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
A H K+FV GL+ + E + F G I + + +DK + +G+ FIT++ +
Sbjct: 129 AKARHGKIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVV 188
Query: 128 QSALRAPSKLIDGR 141
L+ P + I+G+
Sbjct: 189 NELLKTPKQTINGK 202
>gi|146197797|dbj|BAF57616.1| pRM10 protein [Dugesia japonica]
Length = 325
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 121/265 (45%), Gaps = 39/265 (14%)
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
A+ I + D RKLFV GL+W TT E L F G++ + DK TG SRG+GF
Sbjct: 58 ADSINNKVDEDDDSRKLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNSRGFGF 117
Query: 119 ITYKHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSP 173
+T +S + L P +K ID + A +K+++GGLSP
Sbjct: 118 VTMDTEDSLKKVLEVPEHRLKNKKIDPKPAKPTKE-------------PNKKIFVGGLSP 164
Query: 174 EVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRT 233
EVT E + +F ++G +E + +D + + + F+++ T +AAK A+ + + + G
Sbjct: 165 EVTEEQIKEYFSQYGSVESVDLPFDTSKGKRKPYVFLSFTTEDAAKNAIINEKQDVLGSK 224
Query: 234 IIVKLADTHKGKPPQTQLPAAVVPVPLPLGAG-YPQAGKAHANTPPVG--YSYPQNVP-- 288
V++A P+ Q+ + P G+G YP + ++ P G YSY N
Sbjct: 225 CDVRMA------VPKDQVNKNKMAAWGPYGSGMYPPGSEYYSYEYPYGAPYSYDPNAYYS 278
Query: 289 ----------PYPTSSYTSPNTAPV 303
P P Y +P APV
Sbjct: 279 GYYSGYPYAYPMPPQPYVAPPRAPV 303
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 55 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 166
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG+ GEIE + D N+ RGF F+T+K + KK ++ T+ G
Sbjct: 167 NPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSG 226
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 227 SKCEIKVA 234
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|269063716|emb|CAS85143.1| squid, variant D [Blattella germanica]
Length = 294
Score = 99.4 bits (246), Expect = 8e-18, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGL P+++ + + +FF ++G
Sbjct: 119 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGT 164
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 119 AGDHVINNKKVDPKKAKARHGK 140
Score = 45.8 bits (107), Expect = 0.12, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 99.4 bits (246), Expect = 8e-18, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
++FV L ++ S L F G +E VIYDK TG+SRG+GF+T +E ++A+
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 134 -PSKLIDGRLAVCNLACEGLSGVSA--VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++DGR N S+ P ++Y+G LS V L N F GE+
Sbjct: 147 FNGYILDGRSLRVNSGPPPPREQSSRRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEV 206
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQT 249
E V YD+++ SRGFGFVTY + E + AV + + GR I V +A++ KPP+
Sbjct: 207 LEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAES---KPPRR 263
Query: 250 Q 250
Q
Sbjct: 264 Q 264
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 99.4 bits (246), Expect = 8e-18, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
++FV L ++ S L F G +E VIYDK TG+SRG+GF+T +E ++A+
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 134 -PSKLIDGRLAVCNLACEGLSGVSA--VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++DGR N S+ P ++Y+G LS V L N F GE+
Sbjct: 147 FNGYILDGRSLRVNSGPPPPREQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEV 206
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQT 249
E V YD+++ SRGFGFVTY + E + AV + + GR I V +A++ KPP+
Sbjct: 207 LEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAES---KPPRR 263
Query: 250 Q 250
Q
Sbjct: 264 Q 264
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT E L F GEI + ++ D ATG+SRG+GF+T+K + ++
Sbjct: 194 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 253
Query: 134 P----SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
KLID + A+ + + K++IGG+ P V+ FF + G
Sbjct: 254 DHILDGKLIDPKRAISREDQDRVG-----------KIFIGGIDPMVSEGEFNEFFSKFGT 302
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I + + DKDT SRGFGF+T+ + +A + + + TL G+ + VK A
Sbjct: 303 IIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKYLTLKGKAMEVKRA 352
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+ +TT+++L F+ +G++ + V++DK TG+SRG+GFIT+ + + +
Sbjct: 123 RKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPV-ARVA 181
Query: 133 APSKLIDG-----RLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
+DG R A+ G A D +L++GG+S +V E L +F +
Sbjct: 182 DMRHTVDGTQVEVRRAIPREEARDHGGPGADRDAG--RLFVGGISDDVNDESLRAYFRHY 239
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
GEI+ +V D+ N RGFGFV ++ + A+KA+ HK LG
Sbjct: 240 GEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS-HKKLG 281
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
+L RKL++GGLS TT+ L +F ++G++ + V +DK T SRGFGF+T+ T +
Sbjct: 119 ELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVA 178
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
+ D H T+ G + V+ A
Sbjct: 179 RVADMRH-TVDGTQVEVRRA 197
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
AD +LFV G++ + E+L A FR +GEI+ V+ D+ + RG+GF+ +++ +
Sbjct: 211 ADRDAGRLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDA 270
Query: 128 QSALRAPSKL 137
+ A+ + KL
Sbjct: 271 EKAIGSHKKL 280
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+ +TT+++L F+ +G++ + V++DK TG+SRG+GFIT+ + + +
Sbjct: 123 RKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPV-ARVA 181
Query: 133 APSKLIDG-----RLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
+DG R A+ G A D +L++GG+S +V E L +F +
Sbjct: 182 DMRHTVDGTQVEVRRAIPREEARDHGGPGADRDAG--RLFVGGISDDVNDESLRAYFRHY 239
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
GEI+ +V D+ N RGFGFV ++ + A+KA+ HK LG
Sbjct: 240 GEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS-HKKLG 281
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
+L RKL++GGLS TT+ L +F ++G++ + V +DK T SRGFGF+T+ T +
Sbjct: 119 ELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVA 178
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
+ D H T+ G + V+ A
Sbjct: 179 RVADMRH-TVDGTQVEVRRA 197
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
AD +LFV G++ + E+L A FR +GEI+ V+ D+ + RG+GF+ +++ +
Sbjct: 211 ADRDAGRLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDA 270
Query: 128 QSALRAPSKL 137
+ A+ + KL
Sbjct: 271 EKAIGSHKKL 280
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ E+L F +G+I E V+ D T +SRG+GF+T+ S L
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+ +DG+ +A A P + R K+++GGLS T E + ++F + G IE
Sbjct: 90 GTHELDGKKVDPKVAFP----RRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ + +DK TN RGFGFVT+++ + K + + I K+ + K +P + L
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVML 200
Query: 252 PA 253
PA
Sbjct: 201 PA 202
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ TT E + + F G IE+ +++DK T + RG+GF+T++ +
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 133 APSKLIDGRLAVC------------NLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
I+ ++ C NLA +G SA A L + +P T +L
Sbjct: 178 IHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYAGAAPGLLPLANPAPPATPSLL 237
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
VHRK+F+ GL + T+ E+L A F GEI + V+ D T +SRG+GFITY A
Sbjct: 15 VHRKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 74
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
IDGR+ A + +KL+IGG+ + E L +F +G +
Sbjct: 75 QLNRPHRIDGRMVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHDEEQLREYFSNYGNV 134
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKK-AVDDPHKTLGGRTIIVKLA 239
+ S+ DK T + RGFGFV + + K ++ PHK + G+ + VK A
Sbjct: 135 QNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLNAPHK-INGKQLDVKKA 183
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 99.4 bits (246), Expect = 9e-18, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+KLFV GL T ++L A + GEI + V+ D + KSRG+GF+T+K S A
Sbjct: 13 KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQA 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDL--AQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DG+ A + P++ A +K+++GGL +VT E L +FG+ G +
Sbjct: 73 DRPHKVDGKDVDSKRA---MPREETSPEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNV 129
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVKLADTHKGKPPQT 249
+ S+ KDTN SRGF FVT+ ++ K + PH G + + K + + QT
Sbjct: 130 TDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSREELRKVQT 189
Query: 250 QLPAA 254
+ P A
Sbjct: 190 KPPPA 194
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 99.0 bits (245), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI +K +S +
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 101
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A I+ + P A+ K+++GGLS E++ + + NFF G
Sbjct: 102 AGDHTINNK--------------KVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGN 147
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 148 IIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIAGKEVDVKRA 197
Score = 56.6 bits (135), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L F +GEIE +V D +T SRGF F+ +K ++ K +
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 101
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
T+ + + K A GK
Sbjct: 102 AGDHTINNKKVDPKKAKARHGK 123
Score = 40.0 bits (92), Expect = 5.8, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 121 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 180
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 181 KTPKQTIAGK 190
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W TT ETL F +G + + ++ DK TG RG+GF+T+ E +SA RA
Sbjct: 51 KIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTF---EKEESADRA 107
Query: 134 PSKL--IDGRLAVCNLACEGLSGVS-AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+K +DGR A ++ + RK+++GGL T E + +F R G +
Sbjct: 108 ATKRHELDGRQVEAKKAVPKAEYITRSQVTKPTRKIFVGGLPLSCTEEDFMEYFERLGHV 167
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
E + YD T SRGFGFVT+ + + +K + + G+ + VK A+
Sbjct: 168 VEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFEQSQHEIKGKIVEVKKAE 217
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+FV GL + T E F G + E ++YD TG SRG+GF+T+ + +
Sbjct: 141 RKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFE 200
Query: 133 APSKLIDGRLAVCNLA 148
I G++ A
Sbjct: 201 QSQHEIKGKIVEVKKA 216
>gi|240848911|ref|NP_001155674.1| heterogeneous nuclear ribonucleoprotein-like [Acyrthosiphon pisum]
gi|239790977|dbj|BAH72014.1| ACYPI006706 [Acyrthosiphon pisum]
Length = 283
Score = 99.0 bits (245), Expect = 1e-17, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEI ++ D ATG+SRG+ FI +K ++ +A
Sbjct: 33 RKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPATGRSRGFAFIIFKSVDGLNNAFA 92
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+G+ A Q K+++GGL +VT + + FFG+ G I
Sbjct: 93 AGDHVINGKKIDPKKA-----------KAKQEKVFVGGLPSDVTNDEIKEFFGKWGVIVN 141
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLP 252
V +DK N+ +G+ F+TY++ + + +T+ G+ + VK A P P
Sbjct: 142 LEVPFDKMKNQRKGYCFITYESSDKVQDLFKTAKQTIKGKEVDVKKAAPKPANPYAN--P 199
Query: 253 AAVVPVPLPLGAGYPQAGKAHANTPPVGYSY 283
A+ G A PP GY Y
Sbjct: 200 KAM-----------RGRGAARGAYPPQGYDY 219
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 192
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYPQNVP 288
PP T+ LP + L +G GYP G+ + P GY +P +P
Sbjct: 193 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPDYLP 246
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
+G SG + K++IGGLS + + + L ++F + GEI E V D T SRGFGF
Sbjct: 7 QGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
VT+ + K + PH L +TI K+A + +P
Sbjct: 67 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ GL W TT + L F +G + + ++ D ATG+SRG+GF+T++ S ++
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVKT 253
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 254 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTI 303
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + DKDT SRGFGF+TY + EA + + + G+ I +K A
Sbjct: 304 IDAQLMLDKDTGRSRGFGFITYDSSEAVDRVCQNKYIDFKGKQIEIKRA 352
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D+ TG+SRG+GFI +K S L
Sbjct: 73 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVDKVLEQ 132
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL P+++ E + +FG GEIE
Sbjct: 133 KEHRLDGRQIDPKRAM-------AMKKEIVKKIFVGGLKPDLSKEEIEEYFGAFGEIETI 185
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T + RGF F+TYK + KK ++ + T+GG +K+A
Sbjct: 186 ELPQDPKTEKRRGFVFITYKEEPSVKKVLEKKYHTVGGSKCEIKIA 231
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
+S DP K+F+ GL+W TT+E L F GE+ E V+ D AT ++RG+GFIT+
Sbjct: 23 GTSSNDP--GKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTD 80
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
S L +DG+ +A + + + +K++IGGLS T E + N+
Sbjct: 81 PASVDKVLAQELHELDGKKIDPKVAFPKKAQSKMI--IKTKKVFIGGLSATSTLEDMKNY 138
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F ++G++E+ + +DK T RGFGF+T+ + + K + + G K+ + K
Sbjct: 139 FEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEING-----KMVECKK 193
Query: 244 GKPPQTQLP 252
+P + LP
Sbjct: 194 AQPKEVMLP 202
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T + FF + G
Sbjct: 87 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQDFKQFFMQFGR 135
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + + P + L G++I VK A
Sbjct: 136 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEIL-GKSIEVKKA 184
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 28/205 (13%)
Query: 39 LSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGE 98
LS S L DL S L + I+++ K+F+ GL W TT ++L F GE
Sbjct: 132 LSASTLADLTSAL---HECISDDAPD---------KMFIGGLNWETTDQSLKDYFSQFGE 179
Query: 99 IEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA----PSKLIDGRLAVCNLACEGLSG 154
++E V+ D ATG+SRG+GF+T+K ++ + + K+ID + A+ E S
Sbjct: 180 VQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQERTS- 238
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
K+++GG+S E T + FF + G + + ++ DKD+ RGFGFVT+ +
Sbjct: 239 ----------KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDS 288
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLA 239
A + + P + L G+ I VK A
Sbjct: 289 EAAVEATLSGPLEIL-GKPIEVKKA 312
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 55 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 166
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG+ GEIE + D N+ RGF F+T+K + KK ++ T+ G
Sbjct: 167 NPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSG 226
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 227 SKCEIKVA 234
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT + L F +G++ + ++ D ATG+SRG+GF+T+ S ++
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVVKT 268
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 269 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 318
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGF+TY T +A + ++ G+ I +K A+
Sbjct: 319 IDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCENKFIEFKGKRIEIKRAE 368
>gi|426344797|ref|XP_004038940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Gorilla gorilla gorilla]
Length = 363
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 98.6 bits (244), Expect = 1e-17, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL-R 132
++FV L ++ S L F G +E VIYDK TG+SRG+GF+T +E + A+ +
Sbjct: 82 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 141
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR----------KLYIGGLSPEVTTEVLLN 182
++DGR N SG D + R ++Y+G LS V L N
Sbjct: 142 FNGYVLDGRSLRVN------SGPPPPRDRSSRSPQRPRGDANRVYVGNLSWGVDNSALAN 195
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADT 241
F GE+ E + YD+++ SRGFGFVTY + E + A+ + L GR I V +A++
Sbjct: 196 LFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAES 255
Query: 242 HKGKPPQTQ 250
KPP+ Q
Sbjct: 256 ---KPPRQQ 261
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 37 DPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVH 96
D Q GSQ + ++I + + + K+FV GL+W+T+ + L F
Sbjct: 77 DGEEAGQSAATAEAAGSQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKF 135
Query: 97 GEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVS 156
GE+ + + D TG+SRG+GFI +K S L +DGR+ A
Sbjct: 136 GEVTDCTIKMDPNTGRSRGFGFILFKEAASVDKVLEQKEHKLDGRVIDPKKAM------- 188
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
A+ +K+++GGL+PE E + +FG GEIE + D TN+ RGF F+T+K +
Sbjct: 189 AMKKDPVKKIFVGGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEED 248
Query: 217 AAKKAVDDPHKTLGGRTIIVKLA 239
KK ++ + G +K+A
Sbjct: 249 PVKKILEKKFHNVSGSKCEIKVA 271
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K ++
Sbjct: 113 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEAASVDKVLEQ 172
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 173 KEHKLDGRVIDPKKAMAMKKDP 194
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 98.6 bits (244), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ D N+ RGF F+T+K E KK ++ T+ G I V
Sbjct: 114 LPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKIKV 155
Score = 56.6 bits (135), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDP 81
Score = 41.2 bits (95), Expect = 2.8, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D K RG+ FIT+K E +
Sbjct: 80 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 138
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 139 KVLEKKFHTISG 150
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 123/283 (43%), Gaps = 32/283 (11%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
RKLF+ GL+++TT+E+L A F GE+ + V+ D T KSRG+GF+T+K ++ + +
Sbjct: 20 QRKLFIGGLSFDTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVM 79
Query: 132 RAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DGR A +K+++GG+ + T + L + F + G +E
Sbjct: 80 SERPHKLDGRTVTPKRAVSREDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVE 139
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA------DTHKGK 245
V D++T + RGF FVT+ + K V + T+ G V+ A D HK K
Sbjct: 140 LVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDKHKNK 199
Query: 246 PPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPP-----YPTSSYTSPNT 300
P P P + + PP Y + + PP P+S+Y
Sbjct: 200 PGDRG--------PPPPEYMRDRERDYRRSPPPPAYGHDRYGPPGYDRYGPSSAYD--RY 249
Query: 301 APVPYPTQPPISYPPIPLKKDPIGPIGHPATAPKRRIASILGR 343
AP Y YPP P D GP P R AS R
Sbjct: 250 APSSYDR----GYPPPPRDYDRYGP-------PPREYASEYDR 281
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 128
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG+ GEIE
Sbjct: 129 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 181
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K + KK ++ T+ G +K+A
Sbjct: 182 ELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 227
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 128
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 129 KEHRLDGRVIDPKKAMAMKKDP 150
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+T+ E L F GE+ + ++ + +TG+SRG+GF+T+ S ++
Sbjct: 129 KMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVKT 188
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG++PEV + NFFG+ G I
Sbjct: 189 -EHVLDGKV---------IDPKRAIPRDEQDKTGKIFVGGIAPEVRPKEFENFFGKFGTI 238
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGFVT+ +A + + GR I VK A+
Sbjct: 239 IDAQLMLDKDTGRSRGFGFVTFDAPDAVDRVCQGRYLDFNGRQIEVKRAE 288
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 39 LSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGE 98
LS S L DL S L E S + D K+F+ GL W TT ++L F GE
Sbjct: 132 LSASTLADLTSAL--------HECISDDAPD----KMFIGGLNWETTDQSLKDYFSQFGE 179
Query: 99 IEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA----PSKLIDGRLAVCNLACEGLSG 154
++E V+ D ATG+SRG+GF+T+K ++ + + K+ID + A+ E S
Sbjct: 180 VQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQERTS- 238
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
K+++GG+S E T + FF + G + + ++ DKD+ RGFGFVT+ +
Sbjct: 239 ----------KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDS 288
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLA 239
A + + P + L G+ I VK A
Sbjct: 289 EAAVEATLSGPLEIL-GKPIEVKKA 312
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 56 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 114
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 115 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 167
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+ G
Sbjct: 168 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSG 227
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 228 SKCEIKVA 235
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 77 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 136
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 137 KEHRLDGRVIDPKKAMAMKKDP 158
>gi|350535755|ref|NP_001233020.1| uncharacterized protein LOC100167805 [Acyrthosiphon pisum]
gi|239788448|dbj|BAH70906.1| ACYPI008564 [Acyrthosiphon pisum]
Length = 290
Score = 98.6 bits (244), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+FV GL TT + L F GEIE V D ATG++RG+ FI YK ME +AL
Sbjct: 49 RKIFVGGLKGETTEKDLSEHFGQFGEIENINVKVDAATGRARGFAFIVYKTMEGLDNALA 108
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
+ +I+ + P A+ KL++GGLSP++T + + ++F R+
Sbjct: 109 CTNHVINDK--------------KIDPKKAKARHVKLFVGGLSPDLTDDDIKDYFKRYAP 154
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQT 249
+ + YDK N+ +GF FVT+ ++A + + P + G+ + VK A P
Sbjct: 155 LVNAEMPYDKVKNQRKGFCFVTFDCMQAVTEILKTPKHVINGKQVDVKKAALK--VEPYG 212
Query: 250 QLPAAVVPV 258
+P A P+
Sbjct: 213 MMPGASGPM 221
Score = 45.8 bits (107), Expect = 0.10, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H KLFV GL+ + T + + F+ + + + YDK + +G+ F+T+ M++ L
Sbjct: 128 HVKLFVGGLSPDLTDDDIKDYFKRYAPLVNAEMPYDKVKNQRKGFCFVTFDCMQAVTEIL 187
Query: 132 RAPSKLIDGR 141
+ P +I+G+
Sbjct: 188 KTPKHVINGK 197
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 98.6 bits (244), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 28/230 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 192
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP 284
PP T+ LP + L +G GYP G+ + P GY +P
Sbjct: 193 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFP 242
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
+G SG + K++IGGLS + + + L ++F + GEI E V D T SRGFGF
Sbjct: 7 QGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66
Query: 210 VTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
VT+ + K + PH L +TI K+A + +P
Sbjct: 67 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 98.6 bits (244), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T + + +FG GEIE
Sbjct: 61 EHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIE 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ +GG +K+A
Sbjct: 114 LPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVGGSKCEIKVA 158
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K +D
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDP 81
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT E+L F GE+ E V+ D ATG+SRG+GF+T+K + + +
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVM-VK 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG+L + A+P D +R K+++GG+S E + + NFF R G +
Sbjct: 60 EHTLDGKL---------IDPKRAIPRDEQERTAKIFVGGVSQEASQDDFANFFRRFGNVL 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DK+T RGFGFVT+ + A + ++ P + G+ I VK A
Sbjct: 111 DATLMMDKETGRPRGFGFVTFDSEAAVDRTLESP-LAICGKNIEVKRA 157
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ + + FR G + + ++ DK TG+ RG+GF+T+ + L +
Sbjct: 84 KIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLES 143
Query: 134 PSKLIDGRLAVCNLACE 150
P LA+C E
Sbjct: 144 P-------LAICGKNIE 153
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P K+FV L ++ SE L F G +E VIY++ T +SRG+GF++ +E
Sbjct: 121 SEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEE 180
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
+ A+ + +DGRL N A S P + + ++Y+G L +V + L
Sbjct: 181 AEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQV 240
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
F HG++ E V +D++T SRGFGFVT + +E A A D +TL GRTI V +A+
Sbjct: 241 FSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDG--QTLDGRTIRVNVAE 298
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+++G L +V +E L F + G +E V Y+++T+ SRGFGFV+ TVE A+KAV
Sbjct: 126 EAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAV 185
Query: 223 DDPHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
D H+ L GR + V A + +PP+ PA
Sbjct: 186 DMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPA 220
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+++V L W+ S L F HG++ E V++D+ TG+SRG+GF+T + A+ A
Sbjct: 222 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 281
Query: 134 PS-KLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 282 TDGQTLDGRTIRVNVAEE 299
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
++KLF+ GL+ NTT ETL F+ +G+I++ ++ D T +SRG+GF+T+ + +
Sbjct: 15 TNKKLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKI 74
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--------RKLYIGGLSPEVTTEVLLN 182
L +D + +A + PDL RK++IGGLS + L
Sbjct: 75 LLNSPHFLDSKKIDPKIA------IPKKPDLVDKSINTEKTRKVFIGGLSNNTVHKDLEA 128
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA--- 239
FFG++G+IE + DK TN RGFGFV ++ E A + + + + + K A
Sbjct: 129 FFGKYGKIESCELMMDKSTNRHRGFGFVMFEKEEIANHICNIRYHEINSKMVEAKKALPK 188
Query: 240 -----DTHKGKPPQTQLPAAVVPV 258
T+ KP Q + PV
Sbjct: 189 DLIMQTTYSNKPKQQISKSLSTPV 212
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT E+L F GE+ E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVK 163
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
L DG+L + A+P D +R K+++GG+S E T +FF + G +
Sbjct: 164 EHSL-DGKL---------IDPKRAIPRDEQERTAKIFVGGVSQEATEADFKDFFMKFGRV 213
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A ++ ++ P L G+ I VK A
Sbjct: 214 LDATLMMDKDTGRPRGFGFVTFDSELAVERTLEGPLAIL-GKPIEVKRA 261
>gi|353230165|emb|CCD76336.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 346
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 62 IKSVA-SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
I+S A S DP K+F+ GL+ TTSE L F+ +GE+ E ++ D T +SRG+GFIT
Sbjct: 68 IESTADSNDP--GKMFIGGLSPTTTSEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFIT 125
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+ + L ++D + LA SG + ++++IGG++ + T E L
Sbjct: 126 FSDPVCVEKVLETAPHILDYKKIDPKLAVPRKSGQNTKVSTKTKRVFIGGVATQTTNEEL 185
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+F + G++E + DK TN RGFGFVT+++ E+A+K + L + + K A
Sbjct: 186 SEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKKA 244
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 98.2 bits (243), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + TG+S+G+GFI +K S + L
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQ 124
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 125 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 177
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 178 ELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVA 223
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ +T S+GFGF+ +K + +K +D
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQ 124
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 125 KEHRLDGRVIDPKKAMAMKKDP 146
Score = 43.1 bits (100), Expect = 0.69, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T E + F GEIE + D T K RG+ FIT+K E +
Sbjct: 145 DPV-KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVK 203
Query: 129 SALRAPSKLIDG 140
L I G
Sbjct: 204 KVLEKKFHTISG 215
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D +TG+SRG+GF+T+K + T + +
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK-TVNIVMV 174
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DG++ L + + A+P Q K+++GG+S E T + +F + G +
Sbjct: 175 KEHFLDGKIVSYRLIPQQIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRV 234
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+++ ++ P + + G+ I VK A
Sbjct: 235 VDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEVKKA 282
>gi|224129580|ref|XP_002320621.1| predicted protein [Populus trichocarpa]
gi|222861394|gb|EEE98936.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 98.2 bits (243), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G+AW+TT ETL F ++GE+ + ++ DK TG+ RG+GF+ + L+
Sbjct: 4 KLFIGGIAWDTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSLLDPVLQ- 62
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
IDGR + S + K+++GGL P + + +F +G + +
Sbjct: 63 DKHTIDGRSVMTLSPFSSNSSNFLFCNFRTNKIFVGGLPPTLMEDAFRQYFQSYGHVCDV 122
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+ YD+ T RGFGF+T+ T +A + L G+ + VK A P
Sbjct: 123 VLMYDQQTQRPRGFGFITFDTEDAVDNVLQKTFHELNGKLVEVKRALPKDANP 175
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ETL F +G + + ++ D TG+SRG+GF+T++H S ++
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + ++P Q K +++GG+ +V + FF ++G I
Sbjct: 155 -QHILDGKV---------IDPKRSIPREEQDKTGKIFVGGIGADVRPKEFEEFFSQYGNI 204
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + DKDT SRGFGFVTY + +A + + G+ I +K A
Sbjct: 205 IDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRA 253
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 36/259 (13%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLF+ G++W T+ + L F +GE+ + V+ DKATG+ RG+GF+ +
Sbjct: 2 DSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILD 61
Query: 129 SALRAPSKLIDGRLA----------------VCNLACEGLSGVSAVPDLAQRKLYIGGLS 172
L+ +IDGR N SG ++ +K+++GGL
Sbjct: 62 RVLQ-EKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGG--NVKTKKIFVGGLP 118
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGR 232
P ++ E +F G + + V YD+ T RGFGFV++ T +A + + L G+
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGK 178
Query: 233 TIIVKLA---DTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNV-- 287
+ VK A D + G + Q A P G+ +N Y PQN
Sbjct: 179 QVEVKRALPKDANPGGGSRYQGYGASGGNPTTY------DGRMDSNR----YMQPQNTGG 228
Query: 288 --PPYPTSSYTSPNTAPVP 304
PPY +S Y++P P
Sbjct: 229 GFPPYGSSGYSAPGYGYGP 247
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +GEIE V D TG+SRG+ FI YK +S +
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGL+ E++ E + FFG+ G I E
Sbjct: 96 AGDHVINNKKVDPKKAK-----------ARHGKIFVGGLTTEISDEEIKTFFGQFGNIVE 144
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 145 VEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 191
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E + + L FG++GEIE +V D +T SRGF F+ YK+ ++ K V
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 96 AGDHVINNKKVDPKKAKARHGK 117
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K ES L
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + + G +K+++GGLSP++T E L +FG +GEIE
Sbjct: 91 TEHKLDGKLIDPKRA-KAIKGKEPP-----KKVFVGGLSPDITEEQLREYFGVYGEIESI 144
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF FVT+ E +K +++ + +G +K+A
Sbjct: 145 ELPTDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIKVA 190
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L ++ R GE+ + ++ D T SRGFGFV +K E+ + ++
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 91 TEHKLDGKLIDPKRAKAIKGKEPPKKVFVGGLSP 124
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ +P +K+FV GL+ + T E L F V+GEIE + D T + RG+ F+T+
Sbjct: 106 KAIKGKEPP-KKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFA 164
Query: 123 HMESTQSAL 131
E Q L
Sbjct: 165 LEEPVQKLL 173
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H KLFV G++W T+ + L F GE+ E ++ D++TG++RG+GF+ + + +
Sbjct: 6 HGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAER-V 64
Query: 132 RAPSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDGR+ A S + + RK+++GGL VT
Sbjct: 65 TTEKHMIDGRMVEAKKAVPRDDHSIVTKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFR 124
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 125 RYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRA-- 182
Query: 242 HKGKPPQTQLPAAVVPVPLPLGAGY 266
P+ Q P P+ +G Y
Sbjct: 183 ----VPKEQSPGPAARSPVGVGQNY 203
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV G++W TT+ET F GE+ + ++ D+ TG RG+GF+T+ + L
Sbjct: 89 RKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 148
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+ D ++ + G RK+++GGL P + + L N+F +G+I E
Sbjct: 149 EDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIE 208
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH-KTLGGRTIIVKLAD 240
+ YD T SRGFGFVT++T ++ + D LG + + +K A+
Sbjct: 209 HQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAE 257
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+G+ A K+++GGLS E++ E + NFF + G I +
Sbjct: 114 ANDHIINGKKVDPKKAK-----------ARHGKIFVGGLSTELSDEDIKNFFSQFGTIVD 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 163 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKA 209
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + G+ + K A GK
Sbjct: 111 IMSANDHIINGKKVDPKKAKARHGK 135
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
A H K+FV GL+ + E + F G I + + +DK + +G+ FIT++ +
Sbjct: 129 AKARHGKIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVV 188
Query: 128 QSALRAPSKLIDGR 141
L+ P + I+G+
Sbjct: 189 NELLKTPKQTINGK 202
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T + FF + G
Sbjct: 166 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQEFKEFFTQFGR 214
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 215 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRP-LAICGKPIEVKKA 263
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K E
Sbjct: 59 AAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 118
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
S + ++G++ A + + V +K+++GGLSP+ E + +FG
Sbjct: 119 SVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFG 172
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GE+E + DK TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 173 GFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 226
>gi|395834189|ref|XP_003790094.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Otolemur garnettii]
Length = 363
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T + FF + G
Sbjct: 166 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQEFKEFFTQFGR 214
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 215 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRP-LAICGKPIEVKKA 263
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVG 68
Query: 129 SALRAPSKLIDGRL---AVCN---LACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
L+ +DGR CN L SG P K+++GGL VT L +
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSG--GFP-----KVFLGGLPSNVTETDLRS 121
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA--- 239
FF R G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 122 FFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPR 181
Query: 240 -------DTHKGK--PPQTQLPAAVVPVPLPLGA 264
DTH+G+ PPQ P + P+G
Sbjct: 182 DSSSKVNDTHQGQWGPPQQGPPMGMAGNMGPMGG 215
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 23/233 (9%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D K+F+ G++W TT ETL F+V+G++ E ++ DK TG++RG+GFI + +
Sbjct: 2 DTEQGKVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVD 61
Query: 129 SALRAPSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTE 178
L+ IDGR A + S V A P +K+++GGL+P VT +
Sbjct: 62 RVLQD-KHTIDGRQVELKRAVPREEHQRNAQKSGSNVGAGPRT--KKIFVGGLAPTVTED 118
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL 238
+F + G I + V YD + RGFGF+T+ + EA K V L +T+ VK
Sbjct: 119 DFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMKNFHELHDKTVEVKR 178
Query: 239 ADTHKGKPPQTQLPAAVVPVPLPLGA-GYPQAGKAHANTPPVGYSYPQNVPPY 290
A P+ P + P G G PQ + A PP G PPY
Sbjct: 179 AL------PKEMSPGSARARSSPAGPYGNPQNSRYGAPQPPAGRG---GYPPY 222
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
A++ S A P +K+FV GLA T + F G I + V+YD + + RG+GF
Sbjct: 90 AQKSGSNVGAGPRTKKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGF 149
Query: 119 ITYKHMES 126
IT+ E+
Sbjct: 150 ITFDSEEA 157
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 14/168 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T+K + +
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVM-VK 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P Q K+++GG+S E T E NFF + G +
Sbjct: 60 EHYLDGKI---------IDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVV 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DK+T RGFGFVT+ A + P + L G+ I VK A
Sbjct: 111 DATLMMDKETGRPRGFGFVTFDGDAAVDATLRGPLQIL-GKQIEVKRA 157
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T E F+ G + + ++ DK TG+ RG+GF+T+ + + LR
Sbjct: 84 KIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRG 143
Query: 134 PSKLIDGRLAV 144
P +++ ++ V
Sbjct: 144 PLQILGKQIEV 154
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K +S L+
Sbjct: 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 106 KEHRLDGRQIDPKRAM-------AIKKEPVKKIFVGGLNPETTEEKIREYFGSFGEIETI 158
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T++ RGF F+T+K A KK ++ + + G +K+A
Sbjct: 159 ELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIKIA 204
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 124 MESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
ME++++ L G A N A EGL ++ + K+++GGLS + + + L ++
Sbjct: 7 METSENG--NEENLNGGEAAGENGAGEGLQIDASKCEEDAGKMFVGGLSWDTSKKDLKDY 64
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + GE+ + ++ D +T SRGFGF+ +K ++ + + L GR I K A K
Sbjct: 65 FSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQKEHRLDGRQIDPKRAMAIK 124
Query: 244 GKPPQTQLPAAVVP 257
+P + + P
Sbjct: 125 KEPVKKIFVGGLNP 138
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 55 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 166
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG+ GEIE + D N+ RGF F+T+K + KK ++ T+ G
Sbjct: 167 NPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSG 226
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 227 SKCEIKVA 234
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDP 157
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT E++ F G++ + ++ D ATG+SRG+GF+T+ S L+
Sbjct: 107 KMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVLKK 166
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
+ ++DG+L + A+P Q K +++GG++PEVT +F + G I
Sbjct: 167 -THVLDGKL---------IDPKRAIPKEEQDKTGKIFVGGVAPEVTEAEFTEYFQQFGNI 216
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRG+GFVTY + +A + + + G+ + +K A+
Sbjct: 217 IDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQNKYVLFHGKNMEIKRAE 266
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
Q K++IGGL+ E T E + N+F + G++ + ++ D T SRGFGF+T+ + + + +
Sbjct: 105 QGKMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVL 164
Query: 223 DDPHKTLGGRTIIVKLA 239
H L G+ I K A
Sbjct: 165 KKTH-VLDGKLIDPKRA 180
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 97.4 bits (241), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + E+ +
Sbjct: 49 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 108
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A +I+ + P A+ K+++GGLS E++ + + NFF + G
Sbjct: 109 AGDHVINNK--------------KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGN 154
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 155 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTISGKAVDVKKA 204
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L F +G+IE +V D +T SRGF F+ + EA K +
Sbjct: 49 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 108
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 109 AGDHVINNKKVDPKKAKARHGK 130
Score = 41.2 bits (95), Expect = 2.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 128 HGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL 187
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 188 KTPKQTISGK 197
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 146 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 205
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 206 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 259
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK +++ + +G +K+A
Sbjct: 260 ELPMDTKTNERRGFCFITYTDEEPVKKLLENRYHQIGSGKCEIKVA 305
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 146 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 205
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 206 KEHKLDGKLIDPKRAKALKGKEP 228
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G + VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKKA 201
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 144 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 203
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 204 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 257
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 258 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 303
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 144 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 203
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 204 KEHKLDGKLIDPKRAKALKGKEP 226
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 228 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 287
Query: 133 A 133
+
Sbjct: 288 S 288
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A + KLFV G++W T+ + L F GE+ E ++ D++TG++RG+GF+ +
Sbjct: 3 AAAAVADYGKLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFAD- 61
Query: 125 ESTQSALRAPSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPE 174
+ + +IDGR+ A S + + RK+++GGL
Sbjct: 62 PAVAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSN 121
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
VT +F + G I + V YD +T RGFGF+TY + +A KA+ L G+ +
Sbjct: 122 VTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMV 181
Query: 235 IVKLADTHKGKPPQTQLPAAVVPVPLPLGAGY 266
VK A P+ Q P VV P+ +G Y
Sbjct: 182 EVKRA------VPKEQSPGPVVRSPVGVGQNY 207
>gi|302771077|ref|XP_002968957.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
gi|302816651|ref|XP_002990004.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300142315|gb|EFJ09017.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300163462|gb|EFJ30073.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
Length = 162
Score = 97.4 bits (241), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT+E L + F+ +GEI + ++ D+++G RG+GF+T+ + LR
Sbjct: 2 KIFIGGLSWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRVLR- 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++DGR C + S + V +K+++GG+ P +T E +F G + E
Sbjct: 61 DKHVLDGRTVECKRSIPRES-MLVVKGPKTKKIFVGGIPPSITEEEFKAYFSSFGNVIEH 119
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH-KTLGGRTI 234
+ D +T SRGFGF+ + + + + + LGG+ +
Sbjct: 120 QIMQDHNTGRSRGFGFIVFDSEQTVEDVLSHGRMHELGGKQV 161
Score = 45.8 bits (107), Expect = 0.12, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P +K+FV G+ + T E A F G + E ++ D TG+SRG+GFI + ++ +
Sbjct: 87 PKTKKIFVGGIPPSITEEEFKAYFSSFGNVIEHQIMQDHNTGRSRGFGFIVFDSEQTVED 146
Query: 130 AL 131
L
Sbjct: 147 VL 148
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 49 SRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDK 108
S+ GS S + +S+DP KLFV GL+W T+SE L F + G++ + ++ D
Sbjct: 78 SKAGSTNGSSSGRSTPNSSSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDP 137
Query: 109 ATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYI 168
T +SRG+GFIT++ S L+ P +DG+ A +K+++
Sbjct: 138 ITQRSRGFGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATP--KNRPKTQSNKTKKIFV 195
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT 228
GG+S + + E + +F + G+++E + D+ T RGFGFVT++ + + + T
Sbjct: 196 GGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHT 255
Query: 229 LGGRTIIVKLADTHKGKPPQTQ 250
+ + + K A + P Q
Sbjct: 256 IKNKKVECKKAQPKEAVTPTAQ 277
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 54 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 112
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 113 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 165
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE T E + +FG+ GEIE + D N+ RGF F+T+K + KK ++ T+ G
Sbjct: 166 NPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSG 225
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 226 SKCEIKVA 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 135 KEHRLDGRVIDPKKAMAMKKDP 156
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 17/235 (7%)
Query: 14 ILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSR-LGSQYPSIAEEIKS-------- 64
L+ G + S S+S L++ L P + L L R LG P + + S
Sbjct: 97 FLVGGPALDWSCSTSG--LQTALPPSRRVILTAHLFRALGYWIPRLLVKYHSNSSPRHSE 154
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 155 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 214
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 215 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 268
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 269 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 323
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 155 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 214
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
E+ K +D L G+ I K A K K P ++
Sbjct: 215 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKI 250
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 14 ILINGQDFNSSSSSSQDHLRS---------LLDPLSK-SQLVDLLSRLGSQYPSIAEEIK 63
+ I G F ++ S ++H + DP +K S+ D ++ Y + E
Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVT-----YSCVEE--- 88
Query: 64 SVASADPVH----RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
DP RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+
Sbjct: 89 ---GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 145
Query: 120 TYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
TY +E +A+ A +DGR+ A V L +K+++GG+ +
Sbjct: 146 TYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYN 205
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
L ++F ++G+IE V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 206 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 265
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 29/168 (17%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+ F+TY +E +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYSCVEEGHDP-K 93
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
P +L RKL+IGGLS E T + L F + G + +
Sbjct: 94 EPEQL--------------------------RKLFIGGLSFETTDDSLREHFEKWGTLTD 127
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVKLA 239
V D T SRGFGFVTY VE A+ PHK + GR + K A
Sbjct: 128 CVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHK-VDGRVVEPKRA 174
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 16/175 (9%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P KLF+ GL+W+TT E L F +G I E V+ D+ TG+ RG+GF+T+ + +
Sbjct: 6 PTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADA 65
Query: 130 ALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ---RKLYIGGLSPEVTTEVLLNFFGR 186
+ +IDGR + +VP + RK+++GGLSP+ T + +F +
Sbjct: 66 VVED-VHVIDGRQ---------IDAKKSVPQEMKPKARKVFVGGLSPDTTEDQFREYFSQ 115
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK--AVDDPHKTLGGRTIIVKLA 239
GE+ E + D + SRGFGFVT+ +A+ A H LGG+ + VK A
Sbjct: 116 FGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAAGTMHD-LGGKKVEVKPA 169
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
KL++GGLS + T E L + F ++G I E V D+ T RGFGFVT+ AA V+D
Sbjct: 10 KLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVED 69
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
H + GR I K + + KP
Sbjct: 70 VH-VIDGRQIDAKKSVPQEMKP 90
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 26/204 (12%)
Query: 39 LSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGE 98
LS S L DL S L + I+ D K+F+ GL W TT ++L F GE
Sbjct: 132 LSASTLADLTSAL---HECIS---------DDALDKMFIGGLNWETTDQSLKDYFSQFGE 179
Query: 99 IEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAV 158
++E V+ D ATG+SRG+GF+T+K ++ + + +DG++ + A+
Sbjct: 180 VQECTVMRDGATGRSRGFGFLTFKDPKTVNTVM-VKEHYLDGKI---------IDPKRAI 229
Query: 159 P-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
P D +R K+++GG+S E T + FF + G + + ++ DKD+ RGFGFVT+ +
Sbjct: 230 PRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSE 289
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLA 239
A + + P + L G+ I VK A
Sbjct: 290 AAVEATLSGPLEIL-GKPIEVKKA 312
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P K+FV L ++ SE L F G +E VIY++ T +SRG+GF++ +E
Sbjct: 142 SEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEE 201
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
+ A+ + +DGRL N A S P + + ++Y+G L +V + L
Sbjct: 202 AEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQV 261
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
F HG++ E V +D++T SRGFGFVT + +E A A D +TL GRTI V +A+
Sbjct: 262 FSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDG--QTLDGRTIRVNVAE 319
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+++G L +V +E L F + G +E V Y+++T+ SRGFGFV+ TVE A+KAV
Sbjct: 147 EAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAV 206
Query: 223 DDPHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
D H+ L GR + V A + +PP+ PA
Sbjct: 207 DMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPA 241
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+++V L W+ S L F HG++ E V++D+ TG+SRG+GF+T + A+ A
Sbjct: 243 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 302
Query: 134 PS-KLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 303 TDGQTLDGRTIRVNVAEE 320
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 97.4 bits (241), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W TT E L F +GEI+E V+ D T +SRG+GF+TY S L
Sbjct: 24 KMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLAN 83
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+D +L LA + P + R K+++GGLS T E + +F + G+IE
Sbjct: 84 GPHELDTKLIDPKLAFPRRPNATQQPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKIE 143
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+ + +DK T RGF FVT++ + K +
Sbjct: 144 DAMLMFDKATQRHRGFAFVTFECEDVVDKVCE 175
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + T E L +F ++GEI+E V D T SRGFGFVTY + K + +
Sbjct: 24 KMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLAN 83
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAV 255
L + I KLA +P TQ P V
Sbjct: 84 GPHELDTKLIDPKLA--FPRRPNATQQPKMV 112
Score = 47.0 bits (110), Expect = 0.047, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+K+FV GL+ +TT E + F G+IE+ +++DKAT + RG+ F+T++
Sbjct: 116 KKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFE 165
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 11/189 (5%)
Query: 56 PSIAEEIKSVASADPVH-----RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKAT 110
PS++ S DP K+F+ GL+W+T+ + L GE+ + + D T
Sbjct: 29 PSLSPSRFSACPLDPSSFPTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT 88
Query: 111 GKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGG 170
G+SRG+GF+ +K S L +DG+L A + L G +K+++GG
Sbjct: 89 GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA-KALKGKEP-----PKKVFVGG 142
Query: 171 LSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
LSP+ + E + +FG GEIE + D TNE RGF F+TY E KK ++ + +G
Sbjct: 143 LSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIG 202
Query: 231 GRTIIVKLA 239
+K+A
Sbjct: 203 SGKCEIKVA 211
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D GKSRG+GF+T+++ S ++
Sbjct: 151 KMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLTFENSSSVDEVVKT 210
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 211 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSI 260
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ + DKDT SRGFGFVTY + +A K + G+TI +K A+ G
Sbjct: 261 IDAQLMLDKDTGRSRGFGFVTYDSPDAVDKVCQNKFIEFKGKTIEIKRAEQRGG 314
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVG 68
Query: 129 SALRAPSKLIDGRL---AVCN---LACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
L+ +DGR CN L SG P K+++GGL VT L +
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSG--GFP-----KVFLGGLPSNVTETDLRS 121
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA--- 239
FF R G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 122 FFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPR 181
Query: 240 -------DTHKGK--PPQTQLPAAVVPVPLPLGA 264
DTH+G+ PPQ P + P+G
Sbjct: 182 DSSSKVNDTHQGQWGPPQQGPPMGMAGNMGPMGG 215
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT + L F +G + E ++ D ATG+SRG+GF+T+++ S ++
Sbjct: 197 KMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSVDEVVKT 256
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + ++P Q K +++GG+ +V + +FF ++G I
Sbjct: 257 -QHILDGKV---------IDPKRSIPREEQDKTGKIFVGGIGTDVRPKEFEDFFAQYGTI 306
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
+ + DKDT SRGFGFVTY + +A + + + G+ I +K A+ P Q
Sbjct: 307 IDAQLMLDKDTGRSRGFGFVTYDSGDAVDRVCQNKYIEFKGKQIEIKRAE-----PRHNQ 361
Query: 251 LPAAVVPV---PLPLGAGYPQA 269
AA P+ PLG P A
Sbjct: 362 RAAASQPMNTNQTPLGMVNPMA 383
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 2/168 (1%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL T L + GE+ + V+ D TG+SRG+GF+TY+ E A
Sbjct: 17 RKLFIGGLTPQTDEIRLRKYYEQWGELVDFVVMKDNKTGRSRGFGFVTYRDPEMVDEAQN 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+DG++ A + + KL++GGL +VTTE L ++F +G I +
Sbjct: 77 NRPHEVDGKIVEAKRAMPREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTSYGTITD 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVKLA 239
+ KD+ ESRGFGFVT+ + KA+ PH+ +G + VK A
Sbjct: 137 CEIVTWKDSGESRGFGFVTFDDYDPVDKAILYKPHQ-IGSSRVDVKKA 183
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEP 231
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 97.1 bits (240), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA +TT F +GEI + ++ D+ TG+ RG+GF+TY S +
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIE- 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ +I+G+ SG S D +K+++GGL VT + +FF ++G++EE
Sbjct: 79 DTHVINGKQVEIKRTIPKGSGQSK--DFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEH 136
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHKGKPP 247
+ D +TN SRGFGF+ +++ E + + + + + G + +K A+ K P
Sbjct: 137 QIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPKKASNP 191
Score = 44.7 bits (104), Expect = 0.25, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S D +K+FV GL T + F +G++EE +I D T +SRG+GFI ++ E
Sbjct: 101 SKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEV 160
Query: 127 TQSALRAPSKLID 139
L + +ID
Sbjct: 161 VDEIL-SEGNMID 172
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L A F G + + V+ D T +SRG+GF+TY + +A+
Sbjct: 15 RKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMD 74
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR A +K+++GG+ + E L +FG+ G+I+E
Sbjct: 75 ARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDE 134
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
++ +K++++ RGF F+T+ +A + V + T+ G V+ A + +G
Sbjct: 135 VNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKALSREG 186
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
+++ E S A +K+FV G+ +T E L F G+I+E ++ +K + K RG+
Sbjct: 90 AVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGF 149
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCN--LACEGLSGVS 156
FIT+ ++ + ++G L+ EG++ VS
Sbjct: 150 AFITFDDHDAVDRIVIQKYHTVNGHNCEVRKALSREGMNRVS 191
>gi|348688053|gb|EGZ27867.1| hypothetical protein PHYSODRAFT_392284 [Phytophthora sojae]
Length = 183
Score = 97.1 bits (240), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 54 QYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS 113
+Y + ++ + A RK+ V GLA T + L F G++E+ +I DK++GKS
Sbjct: 5 KYHELYADLTTTAENVLSQRKVAVHGLAPETETIKLKQRFITFGKVEDATIIRDKSSGKS 64
Query: 114 RGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLA-QRKLYIGGLS 172
G+G++T+ ++ Q A+R +DG NLA E G A DL+ R L + L+
Sbjct: 65 LGFGYVTFAESKAAQQAIRTLKIKVDGNYVKYNLAAE---GKKASADLSPDRTLMVRALA 121
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGR 232
+ + + L F + GE+E V ++ TN S+G+GFVT++ A A+ P + R
Sbjct: 122 KKTSNDTLWKAFEKFGEVESTHVVRNRSTNASKGYGFVTFREKAGADSALKTPTMKIDVR 181
Query: 233 TI 234
+
Sbjct: 182 LV 183
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 97.1 bits (240), Expect = 4e-17, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L +N S L F G +E VIYDK TG+SRG+GF+T +E ++A +
Sbjct: 39 KIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQ 98
Query: 134 PSKL-IDGR-LAVCNLACEGLS--GVSAVPDL--AQRKLYIGGLSPEVTTEVLLNFFGRH 187
+ +DGR L V + + ++ V + D + ++++G LS +V + L F
Sbjct: 99 FNNYELDGRTLRVTEDSHKDMTLPRVESECDSFGSSNRVHVGNLSWKVDDDALKTLFSET 158
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHKGKP 246
G++ E V YD+DT SRGFGFVTY + A++ L GR+I V A+ + +
Sbjct: 159 GDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAIESLDGVDLNGRSIRVTAAEARQRRG 218
Query: 247 PQ 248
P+
Sbjct: 219 PK 220
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV LA++ S+ L F G +E VIY++ T +SRG+GF+T ++ ++A+
Sbjct: 136 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 195
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ ++GRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 196 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKV 255
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQ 248
E V YD++T SRGFGFVT V+ +A+ + L GR I V +A+ +PP+
Sbjct: 256 VEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEE---RPPR 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT +V+ A+ AV
Sbjct: 134 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 193
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 194 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 228
>gi|90076284|dbj|BAE87822.1| unnamed protein product [Macaca fascicularis]
Length = 231
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIDPKRA-KALKGKGP-----PKKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 189
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 90 KEHKLDGKLIDPKRAKALKGKGPPKKVFVGGLSP 123
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 173
Query: 133 A 133
+
Sbjct: 174 S 174
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV LA++ S+ L F G +E VIY++ T +SRG+GF+T ++ ++A+
Sbjct: 126 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 185
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ ++GRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 186 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKV 245
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQ 248
E V YD++T SRGFGFVT V+ +A+ + L GR I V +A+ +PP+
Sbjct: 246 VEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEE---RPPR 301
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT +V+ A+ AV
Sbjct: 124 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 183
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 184 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 218
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 13/185 (7%)
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
+E +S A K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF
Sbjct: 145 TKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGF 204
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEV 175
++++ S ++ ++DG++ + A+P Q K +++GG+ P+V
Sbjct: 205 LSFEKPSSVDEVVKT-QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDV 254
Query: 176 TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTII 235
+ FF + G I + + DKDT +SRGFGFVTY + +A + + R I
Sbjct: 255 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Query: 236 VKLAD 240
+K A+
Sbjct: 315 IKRAE 319
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|417409049|gb|JAA51051.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 252
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 9/188 (4%)
Query: 53 SQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGK 112
+Q + ++I + + D K+FV GL+W+T+ L F GE+ + + D TG+
Sbjct: 18 NQTSAEGDQINASRTEDDAG-KMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGR 76
Query: 113 SRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLS 172
SRG+GFI +K S + L +DGR+ A A+ +K+++GGL+
Sbjct: 77 SRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKEPVKKIFVGGLN 129
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA-AKKAVDDPHKTLGG 231
PE T E + +FG GEIE + D +++ RGF F+T+K E +KA++ T+G
Sbjct: 130 PEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKALEKKFHTIGA 189
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 190 SKCEIKVA 197
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 38 KMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 97
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K +P + + P
Sbjct: 98 KEHRLDGRVIDPKKAMAMKKEPVKKIFVGGLNP 130
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 140 PEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEK 199
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDL--AQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ + +DGRL N A + V P ++Y+G L +V L+ F
Sbjct: 200 AVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQLFSE 259
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGK 245
HG++ + V YD++T SRGFGFVT T E A+ ++L GR + V +A+ +
Sbjct: 260 HGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEE---R 316
Query: 246 PPQ 248
PP+
Sbjct: 317 PPR 319
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+ KLFV G++W T+ + L F GE+ E ++ D++TG++RG+GF+ + + +
Sbjct: 12 YGKLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFAD-PAVAERV 70
Query: 132 RAPSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDGR+ A S + + RK+++GGL VT
Sbjct: 71 TMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFR 130
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 131 RYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRA-- 188
Query: 242 HKGKPPQTQLPAAVVPVPLPLGAGY 266
P+ Q P VV P+ +G Y
Sbjct: 189 ----VPKEQSPGPVVRSPVGVGQNY 209
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 120 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 179
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 180 QKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEA 232
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTL 229
+ D +N+ RGF F+T+K E KK ++ T+
Sbjct: 233 IELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTI 269
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 126 STQSALRAPSKLIDGR-LAVCNLACEGLS---GVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
S + P +I G L LAC + G + RK+++GGLS + + + L
Sbjct: 78 SRRVGTSGPRGVIGGEELPRLGLACRKRNLYPGRAGTCLYHLRKMFVGGLSWDTSKKDLK 137
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
++F + GE+ + ++ D +T SRGFGF+ +K + +K +D L GR I K A
Sbjct: 138 DYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMA 197
Query: 242 HKGKP 246
K P
Sbjct: 198 MKKDP 202
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 209 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 133 A 133
+
Sbjct: 293 S 293
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + E+ +
Sbjct: 47 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 106
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + G K+++GGLS E++ + + NFF + G I E
Sbjct: 107 AGDHVINNK-KVDPKKAKARHG----------KIFVGGLSTELSDDDIKNFFSQFGNIVE 155
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 156 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKKA 202
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L F +G+IE +V D +T SRGF F+ + EA K +
Sbjct: 47 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 106
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 107 AGDHVINNKKVDPKKAKARHGK 128
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 126 HGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL 185
Query: 132 RAPSKLIDGR 141
+ P + I+G+
Sbjct: 186 KTPKQTINGK 195
>gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens]
Length = 244
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIDPKRA-KALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 189
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 90 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 123
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ +T+ E + F GEIE + D T + RG+ FITY E + L
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 173
Query: 133 A 133
+
Sbjct: 174 S 174
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 62 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 121
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 122 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 181
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 182 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 228
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 22/213 (10%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+ DP K+F+ GL+W T E L F G+I E V+ D +T +SRG+GF+T+
Sbjct: 46 AAHDP--GKMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPA 103
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
S L +DG+ +A A P + R K+++GGLS T E + N+
Sbjct: 104 SVDKVLANGPHELDGKKIDPKIAFPK----RAHPKMVTRTKKVFVGGLSAPTTLEDVKNY 159
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G IE+ + +DK TN RGFGFVT++ + K + + I K+ + K
Sbjct: 160 FQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVCE-----IHFHEINNKMVECKK 214
Query: 244 GKPPQTQLPAAV-----VPVPLPLG----AGYP 267
+P + +P V + PLG AG+P
Sbjct: 215 AQPKEVMMPNNVARGRGAELVWPLGALTDAGFP 247
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+F+ GLA TTS F +GEI + ++ D+ TG+ RG+GF+TY + ++
Sbjct: 2028 RKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQ 2087
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+ +I+G+ G D +K+++GG+ VT E +FF ++GE+++
Sbjct: 2088 -DTHVINGKQVEIKRTIP--KGAIGAKDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKD 2144
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
+ D T+ SRGFGFVT+ T ++AVDD
Sbjct: 2145 HQIMRDHSTSRSRGFGFVTFDT----EQAVDD 2172
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+RK++IGGL+ E T+ + FG++GEI + + D+ T + RGFGFVTY + + +
Sbjct: 2027 RRKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVI 2086
Query: 223 DDPHKTLGGRTIIVK 237
D H + G+ + +K
Sbjct: 2087 QDTH-VINGKQVEIK 2100
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
++ + D +K+FV G+ T E F +GE+++ ++ D +T +SRG+GF+T+
Sbjct: 2107 AIGAKDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDT 2166
Query: 124 MESTQSALRAPSKL 137
++ L +KL
Sbjct: 2167 EQAVDDLLSQGNKL 2180
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 96.7 bits (239), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 5 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 64
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 65 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 114
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 115 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 164
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 147 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 206
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 207 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 256
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 257 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 306
>gi|351709446|gb|EHB12365.1| Heterogeneous nuclear ribonucleoprotein D0 [Heterocephalus glaber]
Length = 271
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ K E
Sbjct: 100 ATAQREEWKMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESE 159
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
S + ++G++ A + + V +K+++GGLSP+ E + +FG
Sbjct: 160 SVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEENIREYFG 213
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 214 GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 267
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K+++GGLS + T + L + F + GE+ + ++ D T SRGFGFV K E+
Sbjct: 102 AQREEWKMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESV 161
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K +D L G+ I K A K K P
Sbjct: 162 DKVMDQKEHKLNGKVIDPKRAKAMKTKEP 190
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 51 LGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKAT 110
L ++ PS ++ ++ + +KLF+ GL+W+T ++L F +GE+ + V+ ++ T
Sbjct: 19 LSTKAPSKSKLVRYPVTKTGKKKKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQT 78
Query: 111 GKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLA-------- 162
GKSRG+GF+T+ + + L A IDGR V C + D
Sbjct: 79 GKSRGFGFVTFNDAQCVDTVLSAAPHTIDGRQ-VDAKPCNPKAANKGPKDGGGRIHGGGG 137
Query: 163 --------QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
+K+++GGL P V + L NFFG++G++ + ++ D+ +SRGFGF+T+++
Sbjct: 138 GGGGGGDKDKKIFMGGL-PNVDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFES 196
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+A + + + G+ + K A+ G+
Sbjct: 197 EDAVDQVCAEHFININGKQVECKRAEPRDGR 227
>gi|171846711|gb|AAI61598.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 280
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S L
Sbjct: 20 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 79
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE + + +F GEIE
Sbjct: 80 KEHRLDGRLIDPKKAM-------AMKKDPIKKIFVGGLNPEAGEDKIREYFETFGEIEAI 132
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + G +K+A
Sbjct: 133 ELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKFEIKIA 178
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 151 GLSGVSAVPDLAQR-----KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESR 205
G VPD++ K+++GGLS + + + L ++F + GE+ + ++ D +T SR
Sbjct: 1 GEEDAGCVPDISSPLTEGVKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSR 60
Query: 206 GFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
GFGF+ +K + K ++ L GR I K A K P
Sbjct: 61 GFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKKDP 101
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES-----TQ 128
K+F+ GL+W TT + L F GE+ E V+ D+AT +SRG+GFIT++ S Q
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQ 81
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
+A K ID ++A + ++ +K+++GGLS T + + N F ++G
Sbjct: 82 AAHELDQKKIDPKVAFPKRSHPKVTRT--------KKIFVGGLSANTTADDIKNHFSQYG 133
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
++EE + +DK TN RGFGFVT+ + + K
Sbjct: 134 KVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDK 165
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 36/49 (73%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
+K+FV GL+ NTT++ + F +G++EE +++DK T + RG+GF+T+
Sbjct: 109 KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTF 157
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 60 EEIKSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
EE + + D ++ RKLFV GL+W TT + L F +G+IE V D TG+SRG+ F
Sbjct: 40 EERSTGGNQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAF 99
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTE 178
I + ES + A +I+ + V + G K+++GGLS E++ +
Sbjct: 100 IVFAKAESLDKIMAAGDHVINNK-KVDPKKAKARHG----------KIFVGGLSTELSDD 148
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL 238
+ NFF + G I E + +DK N+ +GF F+T+++ + + + P +T+ G+ + VK
Sbjct: 149 DIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKK 208
Query: 239 A 239
A
Sbjct: 209 A 209
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + + + K A GK
Sbjct: 111 IMAAGDHVINNKKVDPKKAKARHGK 135
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 96.7 bits (239), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEI+ V D TG+SRG+ FI YK +S +
Sbjct: 40 RKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSIDKVVA 99
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + +G K+++GGL PE++ + + +F + G I E
Sbjct: 100 AGDHIINNK-KVDPKKAKARTG----------KIFVGGLIPEISDDEIRAYFAQFGNIVE 148
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ +DK N+ + F F+T+ + + + P +T+ G+ + VK A P +
Sbjct: 149 MEMPFDKQKNQRKAFCFITFDSETVVNELLKTPKQTISGKEVDVKKATPKPDNAPMMNI 207
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G + VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKKA 201
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H KLFV GL+W T+++ L F +G I + V+ D T +SRG+GFIT+ S L
Sbjct: 22 HNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVL 81
Query: 132 RAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
P+ +DG+ A G A P +K+++GG+S + + + + +F + G +E
Sbjct: 82 AVPAHTLDGKKIDPKHATPKNKG-KATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVE 140
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
E + D+ T RGFGFVT+++ + + + + T+ + + K A
Sbjct: 141 EAVMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKA 188
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 153 SGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTY 212
SG S DL KL++GGLS + + + L +FG++G I + V D T SRGFGF+T+
Sbjct: 12 SGRSTPTDLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITF 71
Query: 213 KTVEAAKKAVDDPHKTLGGRTIIVKLAD-THKGK 245
+ + + P TL G+ I K A +KGK
Sbjct: 72 AEASSVDRVLAVPAHTLDGKKIDPKHATPKNKGK 105
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K A+ +K+FV G++ +T+++ + A F G +EE ++ D+ T + RG+GF+T++
Sbjct: 103 KGKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTFE 162
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+ KLFV G++W T+ + L F GE+ E ++ D++TG++RG+GF+ + + +
Sbjct: 6 YGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAER-V 64
Query: 132 RAPSKLIDGRLAVCNLA-----------CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
IDGR+ A G S S P RK+++GGL VT
Sbjct: 65 TMDKHTIDGRMVEAKKAVPRDDHSIVSKSNGSSTGSPGPGRT-RKIFVGGLPSSVTEADF 123
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 124 RRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRA- 182
Query: 241 THKGKPPQTQLPAAVVPVPLPLGAGY 266
P+ Q P VV P+ +G Y
Sbjct: 183 -----VPKEQSPGPVVRSPVGVGQNY 203
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 220 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 269
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 270 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 94/198 (47%), Gaps = 24/198 (12%)
Query: 65 VASADPVHR-KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
VASA+P K+FV L W+ SE L F G +E VIY+KAT +SRG+GF+
Sbjct: 111 VASAEPSEDLKIFVGNLPWDVESENLAMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMST 170
Query: 124 MESTQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQRK-------------LYIG 169
E + AL S +DGR+ N A A P+ R +Y+G
Sbjct: 171 AEDLEKALNKFSGYELDGRVLTVNKATPK----EARPERPPRTFGSGSGSRDSGLSVYVG 226
Query: 170 GLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPH 226
L V L F HG +E + D++T SRGFGFVT + + A A+D
Sbjct: 227 NLPWSVDAARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADINGAIAALD--G 284
Query: 227 KTLGGRTIIVKLADTHKG 244
++L GRTI V +A+ G
Sbjct: 285 QSLDGRTIRVSVAEGRSG 302
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 159
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E + FF + G
Sbjct: 160 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEQDFKQFFMQFGR 208
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + L G+ I VK A
Sbjct: 209 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKA 257
>gi|355694953|gb|AER99843.1| heteroproteinous nuclear ribonucleoprotein D-like protein [Mustela
putorius furo]
Length = 294
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 94 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 153
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 154 KEHKLDGKLIDPKRA-KALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFGAFGEIENI 207
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 208 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 253
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 94 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 153
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 154 KEHKLDGKLIDPKRAKALKGKEP 176
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L ++ SE L + F G +E VIY++AT +SRG+GF+T +E + A++
Sbjct: 125 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 184
Query: 134 PSKL-IDGRLAVCNLAC-EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
S ++GR+ N A +G ++Y+G L +V L F HG++E
Sbjct: 185 FSGYELNGRVLTVNKAAPKGAQPERPPRPPQSFRVYVGNLPWDVDNSRLEQIFSEHGKVE 244
Query: 192 EGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+ V YD++T SRGFGFVT + + A A+D ++L GR I V +A + KP
Sbjct: 245 DARVVYDRETGRSRGFGFVTMSSETDMNDAIAALD--GQSLDGRAIRVNVA-AQRPKP 299
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 220 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 269
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 270 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 96.3 bits (238), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 220 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 269
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 270 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 220 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 269
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 270 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++FG++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 32 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 91
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 92 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 151
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 152 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 204
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 46 DLLSRLGSQYPSIAEEIKSVASADPVH--------RKLFVRGLAWNTTSETLCAAFRVHG 97
D +G Q E +S D V RKLFV GL+W TT + L F +G
Sbjct: 9 DFSDDVGEQNFEKNGEAESGGGGDAVENGQDSQEDRKLFVGGLSWETTDKELREHFSTYG 68
Query: 98 EIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSA 157
+IE V D TG+SRG+ FI + E+ + A +I+ + A
Sbjct: 69 DIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVDPKKAK-------- 120
Query: 158 VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
K+++GGLS E++ + + NFF + G I E + +DK N+ +GF F+T+++ +
Sbjct: 121 ---ARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQV 177
Query: 218 AKKAVDDPHKTLGGRTIIVKLA 239
+ + P +T+ G+ + VK A
Sbjct: 178 VNELLKTPKQTINGKAVDVKKA 199
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 146 NLACEGLSGVSAVPD----LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDT 201
N E G AV + RKL++GGLS E T + L F +G+IE +V D +T
Sbjct: 22 NGEAESGGGGDAVENGQDSQEDRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNT 81
Query: 202 NESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
SRGF F+ + EA K + + + + K A GK
Sbjct: 82 GRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVDPKKAKARHGK 125
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 96.3 bits (238), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA TTS F +GEI + ++ D+ TG+ RG+GF+TY + ++
Sbjct: 42 KIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQ- 100
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ +I+G+ G D +K+++GG+ VT E +FF ++GE+++
Sbjct: 101 DTHVINGKQVEIKRTIP--KGAIGAKDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKDH 158
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLAD 240
+ D T+ SRGFGFVT+ T +A + +K L G + +K A+
Sbjct: 159 QIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKAE 206
Score = 46.6 bits (109), Expect = 0.062, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
++ + D +K+FV G+ T E F +GE+++ ++ D +T +SRG+GF+T+
Sbjct: 120 AIGAKDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDT 179
Query: 124 MESTQSALRAPSKL 137
++ L +KL
Sbjct: 180 EQAVDDLLSQGNKL 193
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
+P + K+F+ GLA TT F +GEI + ++ D+ TG+ RG+GFITY
Sbjct: 1972 NPQNTKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVD 2031
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
+ P +I+G+ G D +K+++GG+ VT + +FF R+G
Sbjct: 2032 KVIEDP-HIINGKQVEIKRTIP--RGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYG 2088
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHK--GK 245
E+++ + D TN SRGFGF+T+ + EA + +K G + +K A+ K
Sbjct: 2089 EVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPKKPSSA 2148
Query: 246 PPQTQ 250
PP ++
Sbjct: 2149 PPSSK 2153
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
+V S D +K+FV G+ N T + F +GE+++ ++ D +T +SRG+GFIT+
Sbjct: 2055 AVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDS 2114
Query: 124 MESTQSALRAPSKL 137
E+ L +K+
Sbjct: 2115 EEAVDDLLSMGNKI 2128
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E + FF + G
Sbjct: 172 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEQDFKQFFMQFGR 220
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + L G+ I VK A
Sbjct: 221 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKA 269
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 96.3 bits (238), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D +G+SRG+GF+T+K ++ + +
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVK 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
L DG+L + A+P D +R K+++GG+S E T + FF + G +
Sbjct: 61 EHSL-DGKL---------IDPKRAIPRDEQERTAKIFVGGVSQEATEQDFKEFFMQFGRV 110
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ +A ++ ++ P L G+ I VK A
Sbjct: 111 LDATLMMDKDTGRPRGFGFVTFDDEKAVERTLEGPLAIL-GKGIEVKRA 158
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 38 PLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHG 97
P + VD + R + P E + RK+F+ GLA TT+ F +G
Sbjct: 1900 PRTPQPFVDYVRRTIDETPFYKREAR--------RRKIFIGGLARETTTAQFVKHFGKYG 1951
Query: 98 EIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSA 157
EI + ++ D+ TG+ RG+GF+TY ++ S +I+G+ G
Sbjct: 1952 EITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQ-DSHVINGKQVEIKRTIP--KGAIG 2008
Query: 158 VPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
D +K+++GG+ VT FF ++GE+ E + D TN SRGFGF+T+ T +A
Sbjct: 2009 ARDFKTKKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQA 2068
Query: 218 AKKAVDDPHK-TLGGRTIIVKLADTHKGKPP 247
+ +K L G + +K A+ K PP
Sbjct: 2069 VDDLLAKGNKLELAGGQVEIKKAEPKKPNPP 2099
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 14/168 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVM-VK 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P D +R K+++GG+S + T + FF + G +
Sbjct: 60 EHYLDGKI---------IDPKRAIPRDEQERTSKIFVGGVSQDATEQDFKKFFMQFGRVV 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + + P + L G+ I VK A
Sbjct: 111 DATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKA 157
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ + T + F G + + ++ DK TG+ RG+GF+T+ + ++ L
Sbjct: 84 KIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 220 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 269
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 270 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 59 AEEIKSV-ASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++E +SV AS D ++ RKLFV GL+W TT + L F +G+IE V D TG+SRG+
Sbjct: 40 SQEDRSVRASQDSLNDRKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGF 99
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVT 176
FI + ES + A +I+ + V + G K+++GGLS E++
Sbjct: 100 AFIVFAKAESLDKIMSAGDHVINNK-KVDPKKAKARHG----------KIFVGGLSTELS 148
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ + NFF + G I E + +DK N+ +GF F+T+++ + + + +T+ G+ + V
Sbjct: 149 DDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDV 208
Query: 237 KLA 239
K A
Sbjct: 209 KKA 211
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 139 DGRLAVCNLACEGLSGVSAVPD-LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAY 197
D +A N + V A D L RKL++GGLS E T + L F +G+IE +V
Sbjct: 30 DNSIADNNQESQEDRSVRASQDSLNDRKLFVGGLSWETTDKELREHFSAYGDIESINVKT 89
Query: 198 DKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
D +T SRGF F+ + E+ K + + + + K A GK
Sbjct: 90 DPNTGRSRGFAFIVFAKAESLDKIMSAGDHVINNKKVDPKKAKARHGK 137
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
++P H RKLF+ GL + TT + L A F G+I + V+ D T +SRG+GFITY H
Sbjct: 21 SEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSM 80
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A +A IDGR+ A S +KL++G L + + L ++F
Sbjct: 81 VDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQH 140
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 141 YGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%)
Query: 34 SLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAF 93
S++D K++ + R+ ++ + +A +KLFV L + ++L F
Sbjct: 79 SMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYF 138
Query: 94 RVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+ +G I + ++ DK TGK RG+ F+ + + + ++G++ A
Sbjct: 139 QHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E + +FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEQDFKSFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + A+ P + L G+ I VK A
Sbjct: 110 VDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKA 157
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ + + F G + + ++ DK TG+ RG+GF+T+ + ++AL
Sbjct: 84 KIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+TT T+ F +GE+ + V+ + TGKSRG+GF+T+K ++ L
Sbjct: 9 KIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLAN 68
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++D R CN G SA + ++RK+++GGL +T + + F GE+
Sbjct: 69 QPHVLDSRQIDPKQCNPRSMNKGGKSA--ENSKRKVFMGGLPSNITEDEIKEHFAEFGEV 126
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++ + D+D SRGFGF+T+ E+ +K + + + G+ + K A
Sbjct: 127 QDVVIMVDQDKERSRGFGFLTFDCEESVEKVISQHYVPVKGKQVECKRA 175
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K SA+ RK+F+ GL N T + + F GE+++ ++ D+ +SRG+GF+T+
Sbjct: 90 KGGKSAENSKRKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFD 149
Query: 123 HMESTQSALRAPSKLIDGRLAVCNLA 148
ES + + + G+ C A
Sbjct: 150 CEESVEKVISQHYVPVKGKQVECKRA 175
>gi|402220502|gb|EJU00573.1| hypothetical protein DACRYDRAFT_53825 [Dacryopinax sp. DJM-731 SS1]
Length = 382
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL--- 131
+FV GL W+TT E+L F GE++ ++ D A G+SRG+ F+T++ + + +
Sbjct: 1 MFVGGLNWDTTDESLRRYFEQFGEVDACTIMRD-AGGRSRGFAFLTFREPAAVNAVMVRE 59
Query: 132 -RAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ L + +KL+IGGL+P VT+E + +FF + G +
Sbjct: 60 HHLDGKIIDPKRAIPRLEHQ-----------KTQKLFIGGLAPSVTSESMRDFFSQFGAV 108
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +V D+++ S+GFGFVT++ + A+K V ++ G+ I VK+A
Sbjct: 109 IDSTVMVDRESGRSKGFGFVTFEDGQGAEKLVGQGILSIDGKPIEVKIA 157
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+KLF+ GLA + TSE++ F G + + V+ D+ +G+S+G+GF+T++ + + +
Sbjct: 82 QKLFIGGLAPSVTSESMRDFFSQFGAVIDSTVMVDRESGRSKGFGFVTFEDGQGAEKLVG 141
Query: 133 APSKLIDGR 141
IDG+
Sbjct: 142 QGILSIDGK 150
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 25 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 84
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 85 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 144
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 145 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 197
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L ++ SE L + F G +E VIY++AT +SRG+GF+T +E + A++
Sbjct: 123 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 182
Query: 134 PSKL-IDGRLAVCNLAC-EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
S ++GR+ N A +G ++Y+G L +V L F HG++E
Sbjct: 183 FSGYELNGRVLTVNKAAPKGAQPERPPRPPQSFRVYVGNLPWDVDNSRLEQIFSEHGKVE 242
Query: 192 EGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLA 239
+ V YD++T SRGFGFVT + + A A+D ++L GR I V +A
Sbjct: 243 DARVVYDRETGRSRGFGFVTMSSETDMNDAIAALD--GQSLDGRAIRVNVA 291
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+++V L W+ + L F HG++E+ V+YD+ TG+SRG+GF+T A+ A
Sbjct: 216 RVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAA 275
Query: 134 -PSKLIDGRLAVCNLACE 150
+ +DGR N+A +
Sbjct: 276 LDGQSLDGRAIRVNVAAQ 293
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 133 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 192
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 193 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 246
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 247 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 292
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E + FF + G
Sbjct: 172 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEQDFKQFFMQFGR 220
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + L G+ I VK A
Sbjct: 221 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKA 269
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
+ +K+F+ GL W TT E+L F GE+ E V+ D ATG+SRG+GF+T+K +
Sbjct: 223 IAKKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIV 282
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRH 187
+ +DG++ + A+P Q K+++GG+SPE T +F +
Sbjct: 283 M-VKEHYLDGKI---------IDPKRAIPRDEQEKTSKIFVGGVSPETTDHEFREYFSQF 332
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G + + ++ DKDT RGFGFVT+++ EA +A + L G+ I VK A
Sbjct: 333 GRVVDATLMMDKDTGRPRGFGFVTFES-EAGVEACLNAKLELHGKPIEVKKA 383
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|417409403|gb|JAA51208.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 292
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 9/188 (4%)
Query: 53 SQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGK 112
+Q + ++I + + D K+FV GL+W+T+ L F GE+ + + D TG+
Sbjct: 11 NQTSAEGDQINASRTEDDAG-KMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGR 69
Query: 113 SRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLS 172
SRG+GFI +K S + L +DGR+ A A+ +K+++GGL+
Sbjct: 70 SRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKEPVKKIFVGGLN 122
Query: 173 PEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEA-AKKAVDDPHKTLGG 231
PE T E + +FG GEIE + D +++ RGF F+T+K E +KA++ T+G
Sbjct: 123 PEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKALEKKFHTIGA 182
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 183 SKCEIKVA 190
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 143 AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTN 202
AV + EG ++ + K+++GGLS + + L ++F + GE+ + ++ D +T
Sbjct: 9 AVNQTSAEGDQINASRTEDDAGKMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTG 68
Query: 203 ESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGF+ +K + +K +D L GR I K A K +P
Sbjct: 69 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKEP 112
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 220 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 269
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 270 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
>gi|40850963|gb|AAH65334.1| Hnrpa0l protein, partial [Danio rerio]
Length = 299
Score = 95.9 bits (237), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 4/172 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL TT E L A F +G++ + V+ ++ +SR +GF+TY +E +A+ A
Sbjct: 4 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSIEEADAAMSA 63
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
++DG A + P++ + K+++GGL ++ E L ++F + G IE
Sbjct: 64 RPHIVDGNNVDLKRAVARED--AGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIE 121
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
+ V DKDT + RGFGFV + ++A KAV ++ G + VK A T +
Sbjct: 122 KAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQ 173
Score = 46.6 bits (109), Expect = 0.066, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+K+FV GL + E L F G IE+ VI DK TGK RG+GF+ + +S A+
Sbjct: 94 KKIFVGGLKDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAV 152
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 21 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 80
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 81 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQH 140
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 141 FGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV LA++ S+ L F G +E VIY++ T +SRG+GF+T ++ ++A+
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ ++GRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKV 270
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQ 248
E V YD++T SRGFGFVT V+ +A+ + L GR I V +A+ +PP+
Sbjct: 271 VEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEE---RPPR 326
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT +V+ A+ AV
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 243
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 20 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 79
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 80 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQH 139
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 140 FGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 192
>gi|428181280|gb|EKX50144.1| hypothetical protein GUITHDRAFT_67277, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 95.9 bits (237), Expect = 9e-17, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 14/174 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH--------ME 125
KLF+ G+ +TT L + F G + + V+ DK TGK RG+GF+T+ +
Sbjct: 1 KLFIGGITLDTTEMDLKSHFEQFGSLTDVVVMRDKNTGKGRGFGFVTFNDPAGIPRFTLH 60
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
+ + ++ GR + G+SA L K+++GG++ VTT+ L +FG
Sbjct: 61 GGLTDVLVADNVVRGRHEIRG------PGISADDSLQTSKVFVGGIASTVTTQDLYEYFG 114
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++GE+E+ V D T+ SRGF FVT+K E + ++ L + + +KLA
Sbjct: 115 KYGEVEDVQVMVDPQTHRSRGFAFVTFKHAETVQDVMNYQEHELHNKRVEIKLA 168
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 79 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 138
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 139 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 198
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 199 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 245
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 95.9 bits (237), Expect = 9e-17, Method: Composition-based stats.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKL+V + T++ L A F HG + V+YDK +G+SR +GF+T E +A+
Sbjct: 69 RKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIE 128
Query: 133 APSKL-IDGRLAVCNLACEGLSGVSA-VPDL------AQRKLYIGGLSPEVTTEVLLNFF 184
+ + + GR N+ L + A P+ +Q K+Y+G L+ +VTTEVL NFF
Sbjct: 129 SLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFVDSQYKVYVGNLAKKVTTEVLKNFF 188
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLA 239
GE+ +V+ T +S+G+GFVT+ + E + AV + T L G+TI V A
Sbjct: 189 SEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQTIRVNRA 244
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 153 SGVSAVPD-LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVT 211
S V P+ LA RKLY+G + VT + L F HG + V YDK + SR FGFVT
Sbjct: 57 SAVMEAPEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVT 116
Query: 212 YKTVEAAKKAVDDPHKT-LGGRTIIVKLADT 241
T E A++ + T +GGR I V + ++
Sbjct: 117 MSTAEEVAAAIESLNDTEVGGRKIKVNVTES 147
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E + FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEQDFKQFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + A+ P + L G+ I VK A
Sbjct: 110 VDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKA 157
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ + F G + + ++ DK TG+ RG+GF+T+ + ++AL
Sbjct: 84 KIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV LA++ S+ L F G +E VIY++ T +SRG+GF+T ++ ++A+
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ ++GRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKV 270
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQ 248
E V YD++T SRGFGFVT V+ +A+ + L GR I V +A+ +PP+
Sbjct: 271 VEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEE---RPPR 326
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT +V+ A+ AV
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 243
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + T+ E L A F G+I + V+ D T +SRG+GFITY H
Sbjct: 24 TEPEHMRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSM 83
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A +A IDGR+ A S +KL++G L + + L ++F
Sbjct: 84 IDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFSN 143
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 144 FGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 196
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 55 YPSIAEEIKSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKS 113
+PS EI+ +P RKLF+ GL++ TT ++L F G + + V+ D T +S
Sbjct: 20 FPST--EIRGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 77
Query: 114 RGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSP 173
RG+GF+TY +E +A+ A +DGR+ A V L +K+++GG+
Sbjct: 78 RGFGFVTYSCVEEVDAAMAARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKE 137
Query: 174 EVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRT 233
+ L ++F ++G+IE V D+ + + RGF FVT+ + K V + T+ G
Sbjct: 138 DTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHN 197
Query: 234 IIVKLA 239
VK A
Sbjct: 198 CEVKKA 203
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L F GE+ E ++ D++TG++RG+GF+ + + +
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA-TVAERVTI 67
Query: 134 PSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+IDGR+ A S + + RK+++GGL VT +
Sbjct: 68 EKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGY 127
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 128 FEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKA---- 183
Query: 244 GKPPQTQLPAAVVPVPLPLGAGY 266
P+ Q P V P +G Y
Sbjct: 184 --VPKEQSPGPVARSPAGVGQNY 204
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 60 EEIKSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
S+ S P RK+FV GL N T F G I + V+YD T + RG+GF
Sbjct: 94 SNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGF 153
Query: 119 ITYKHMESTQSALRAPSKLIDGRL 142
ITY ++ AL ++G++
Sbjct: 154 ITYDSEDAVDKALHKSFHELNGKM 177
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 43 QLVDLLSRLGSQYPSIAEE-IKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEE 101
QL +S+L Q P+ + +K+ S D K+F+ GL W TT ETL F +G++ E
Sbjct: 129 QLRQTMSQL--QQPADSSRPVKADLSKDSC--KMFIGGLNWETTEETLRDYFNKYGKVVE 184
Query: 102 GAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDL 161
++ D TG+SRG+GF+T++ S ++ ++DG++ + A+P
Sbjct: 185 LKIMKDNNTGRSRGFGFLTFEDATSVDEVVKT-QHILDGKV---------IDPKRAIPRE 234
Query: 162 AQRK---LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
Q K +++GG+ +V + +FF ++G I + + DKDT SRGFGFVTY + +A
Sbjct: 235 EQDKTGKIFVGGIGADVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV 294
Query: 219 KKAVDDPHKTLGGRTIIVKLAD 240
+ + G+ I +K A+
Sbjct: 295 DRVCQNKFIEFKGKQIEIKRAE 316
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV LA++ S+ L F G +E VIY++ T +SRG+GF+T ++ ++A+
Sbjct: 137 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 196
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ ++GRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 197 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKV 256
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQ 248
E V YD++T SRGFGFVT V+ +A+ + L GR I V +A+ +PP+
Sbjct: 257 VEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEE---RPPR 312
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT +V+ A+ AV
Sbjct: 135 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 194
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 195 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 229
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 95.9 bits (237), Expect = 9e-17, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 6 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 65
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 66 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 125
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 126 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 172
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 11 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 70
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 71 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 130
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 131 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 177
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 39 LSKSQLVDLLSRL---GSQYPSIAEEIKSVASADPVH-RKLFVRGLAWNTTSETLCAAFR 94
LS LV LS L S ++ ++ + +P H RKLF+ GL + TT E L A F
Sbjct: 2579 LSGEPLVMWLSGLHIPQSYLTALVQDFAQDSITEPEHMRKLFIGGLDYRTTDENLKAHFE 2638
Query: 95 VHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSG 154
G I + V+ D T +SRG+GFITY H A ++ IDGR+ A
Sbjct: 2639 KWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDI 2698
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
S +KL++G L + + + ++F G I + ++ DK+T + RGF FV +
Sbjct: 2699 DSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDD 2758
Query: 215 VEAAKKAVDDPHKTLGGRTIIVKLA 239
+ K V L G+ + VK A
Sbjct: 2759 YDPVDKVVLQKQHQLNGKMVDVKKA 2783
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 56 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 115
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 116 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 175
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 176 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 228
>gi|88682985|gb|AAI05387.1| HNRPDL protein [Bos taurus]
Length = 336
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 65 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 124
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 125 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 178
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 179 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 224
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 65 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 124
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 125 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 158
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 22 NSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQ-YPSIAEEIKSVASADPVHRKLFVRGL 80
++S DH + +DP + + D S LGSQ YP + +A A RKLFV GL
Sbjct: 51 STSGCGVVDH-QGRVDPCVPAVVSDAGSVLGSQTYP-----VDVMAEA----RKLFVGGL 100
Query: 81 AWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDG 140
W+TT ETL + F +GE+ + ++ DK T +SRG+GF+ +K + L + +DG
Sbjct: 101 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDG 160
Query: 141 RLAVCNLAC-------------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
R + C EG + K+++GG+ L +F +
Sbjct: 161 R-NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKF 219
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK---- 243
G + E + YD + RGFGF+T++ ++ +AV+ + G+ + VK A+
Sbjct: 220 GVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 279
Query: 244 --GKPPQTQLPAAVVPVPLPLGAGYP 267
G+P +Q + VVP AG P
Sbjct: 280 PPGQPGASQWGSRVVPNAANGWAGQP 305
>gi|351695029|gb|EHA97947.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Heterocephalus glaber]
Length = 340
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 23 SSSSSSQDHLRSL--LDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHR-KLFVRG 79
S++++S +R+ L P S ++ ++ S AE K AS + K+F+ G
Sbjct: 16 SAAAASTPAIRTARPLSPADGSATMEDMNEY-SNIEEFAEGSKINASKNQQDDGKMFIGG 74
Query: 80 LAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLID 139
L+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L +D
Sbjct: 75 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 134
Query: 140 GRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDK 199
G+L A + L G +K+++GGLSP+ + E + +FG GEIE + D
Sbjct: 135 GKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 188
Query: 200 DTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 189 KTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 228
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 69 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 128
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 129 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 162
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L F GE+ E ++ D++TG++RG+GF+ + + +
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA-TVAERVTI 67
Query: 134 PSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+IDGR+ A S + + RK+++GGL VT +
Sbjct: 68 EKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGY 127
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 128 FEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKA---- 183
Query: 244 GKPPQTQLPAAVVPVPLPLGAGY 266
P+ Q P V P +G Y
Sbjct: 184 --VPKEQSPGPVARSPAGVGQNY 204
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 60 EEIKSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
S+ S P RK+FV GL N T F G I + V+YD T + RG+GF
Sbjct: 94 SNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGF 153
Query: 119 ITYKHMESTQSALRAPSKLIDGRL 142
ITY ++ AL ++G++
Sbjct: 154 ITYDSEDAVDKALHKSFHELNGKM 177
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+++DP KLFV GL+W T+SE L F + G++ + ++ D T +SRG+GFIT++
Sbjct: 160 STSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPN 219
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
S L+ P +DG+ A +K+++GG+S + + E + +F
Sbjct: 220 SVDKVLKVPIHTLDGKKIDPKHATP--KNRPKTQSNKTKKIFVGGVSQDTSAEEVKQYFS 277
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+ G++EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 278 QFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQPKEAV 337
Query: 246 PPQTQ 250
P Q
Sbjct: 338 TPTAQ 342
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
++ D A KL++GGLS + ++E L +FG G++ + + D T SRGFGF+T++
Sbjct: 159 NSTSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEP 218
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+ K + P TL G+ I K A T K +P
Sbjct: 219 NSVDKVLKVPIHTLDGKKIDPKHA-TPKNRP 248
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 11 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 70
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L +F ++G+IE
Sbjct: 71 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 130
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 131 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 177
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 95.5 bits (236), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT + L A F G+I + V+ D T +SRG+GFITY H
Sbjct: 21 TEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSM 80
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A +A IDGR+ A S +KL++G L + + L ++F
Sbjct: 81 VDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQH 140
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 141 YGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%)
Query: 34 SLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAF 93
S++D K++ + R+ ++ + +A +KLFV L + ++L F
Sbjct: 79 SMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYF 138
Query: 94 RVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
+ +G I + ++ DK TGK RG+ F+ + + + ++G++ A
Sbjct: 139 QHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
>gi|395816795|ref|XP_003781875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Otolemur
garnettii]
Length = 350
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 38 PLSKSQLVDLLSRLGSQYPSIAEEIKSVASADP-VHRKLFVRGLAWNTTSETLCAAFRVH 96
P S ++ +S +G+ E K AS D K+F+ GL+W+T+ L
Sbjct: 47 PADSSTTMEDMSEVGN-IEEFTEGSKINASKDQQTDGKMFIGGLSWDTSKRDLTEYLSRF 105
Query: 97 GEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVS 156
GE+ + + D +G+SRG+GF+ +K S L +DG+L +
Sbjct: 106 GEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDKVLELKEHKLDGKL---------IDPQR 156
Query: 157 AVP---DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYK 213
A P +K+++GGLSP+ + E + ++FG GEIE + D+ TNE RGF FVTY
Sbjct: 157 AKPLKEKAPPKKVFVGGLSPDTSKEQIKDYFGAFGEIENIELPRDRKTNERRGFCFVTYT 216
Query: 214 TVEAAKKAVDDPHKTLGGRTIIVKLA 239
E KK ++ + +G +K+A
Sbjct: 217 EGEPVKKLLESRYHHIGSGKCEIKVA 242
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + L + R GE+ + + D + SRGFGFV +K + K ++
Sbjct: 83 KMFIGGLSWDTSKRDLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDKVLEL 142
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
L G KL D + KP + + P V V
Sbjct: 143 KEHKLDG-----KLIDPQRAKPLKEKAPPKKVFV 171
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 25/230 (10%)
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+ + +S+D KLFV G++W TT ET + F GEI + ++ D+ +G+ RG+GF+T
Sbjct: 67 QTRDNSSSDSSQGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVT 126
Query: 121 YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+ + + L + D + V V V + RK+++GG+ P +T + L
Sbjct: 127 FADLAAADRVLEEDHIIDDRAVEVKRTVPREEMEVKGV--VRARKIFVGGIPPTLTEDEL 184
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK--AVDDPHKTLGGRTIIVKL 238
+F +G I E + D T SRGFGFVT++T ++ ++ + H+ LGG+ + +K
Sbjct: 185 GEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHE-LGGKRVEIKK 243
Query: 239 ADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHA--NTPPVGYSYPQN 286
A VP G Y +GK H + GY N
Sbjct: 244 A------------------VPKRNGGDYGSSGKYHTGFSNGAGGYGAGHN 275
>gi|355687288|gb|EHH25872.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Macaca mulatta]
Length = 309
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 38 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 97
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 98 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 151
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 152 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 197
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 38 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 97
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 98 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 131
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 95.5 bits (236), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K E
Sbjct: 61 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 120
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
S + ++G++ A + + V +K+++GGLSP+ E + +FG
Sbjct: 121 SVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFG 174
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 175 GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 228
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+
Sbjct: 63 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 122
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K +D L G+ I K A K K P
Sbjct: 123 DKVMDQKEHKLNGKVIDPKRAKAMKTKEP 151
>gi|444723245|gb|ELW63904.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 326
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIDPKRA-KALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 189
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 90 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 123
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 95.5 bits (236), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W TT E L F+ +GE+ E ++ D+ TG++RG+GF+ + L
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVL-L 65
Query: 134 PSKLIDGRLA--------VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
IDGR+A V ++G +K+++GGL VT + +F
Sbjct: 66 DKHTIDGRVAVPRDEQHSVVKANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFE 125
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ G I + V YD T RGFGF+T+ T EA + L + + VK A
Sbjct: 126 QFGTITDVVVMYDHATQRPRGFGFITFDTEEAVDNVLHKTFHELKEKMVEVKRA 179
Score = 58.5 bits (140), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
Q KL+IGG+S E T E L ++F +GE+ E + D+ T +RGFGFV + A + +
Sbjct: 5 QGKLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVL 64
Query: 223 DDPHKTLGGRTII 235
D H T+ GR +
Sbjct: 65 LDKH-TIDGRVAV 76
Score = 47.8 bits (112), Expect = 0.025, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
+K+FV GL N T + F G I + V+YD AT + RG+GFIT+ E+ + L
Sbjct: 104 KKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRGFGFITFDTEEAVDNVL 162
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 23 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 82
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 83 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQN 142
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 143 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 195
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 95.5 bits (236), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K E
Sbjct: 82 ATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 141
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
S + ++G++ A + + V +K+++GGLSP+ E + +FG
Sbjct: 142 SVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFG 195
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 196 GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 249
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+
Sbjct: 84 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 143
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K +D L G+ I K A K K P
Sbjct: 144 DKVMDQKEHKLNGKVIDPKRAKAMKTKEP 172
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T + L FR +GE+ E ++ D+ TG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVV-M 65
Query: 134 PSKLIDGRLAVCNLAC---------EGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNF 183
+IDGR A + P + +K+++GGL+ VT +
Sbjct: 66 DKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKY 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + EA ++ + L G+ + VK A +
Sbjct: 126 FDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 GKPPQTQLP 252
P ++ P
Sbjct: 186 HSPGPSRSP 194
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA T F G I + V+YD T + RG+GFITY E+ + L
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLH 165
Query: 133 APSKLIDGRLAVCNLAC 149
++G++ A
Sbjct: 166 KTFHELNGKMVEVKRAV 182
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L A F G + + V+ D A +SRG+GF+TY + +A+
Sbjct: 13 RKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVTYAGVNEVDAAME 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGRL A + +K+++GG+ + L ++F + G+IE
Sbjct: 73 ARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQFGKIEV 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+++ + RGF FVT+ +A + V + TL G V+ A
Sbjct: 133 IDIMTDRNSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKA 179
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 95.5 bits (236), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F + EIE V TG+SRG+ FI +K ES +
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A I+ + P A+ K+++GGLS E++ + + NFF G
Sbjct: 103 AGEHTINNK--------------KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 148
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+++ + + P +T+GG+ + VK A
Sbjct: 149 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 198
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + FG + EIE +V +T SRGF F+ +K E+ K +
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
T+ + + K A GK
Sbjct: 103 AGEHTINNKKVDPKKAKARHGK 124
Score = 40.8 bits (94), Expect = 3.7, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 122 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 181
Query: 132 RAPSKLIDGR 141
+ P + I G+
Sbjct: 182 KTPKRTIGGK 191
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 21 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 80
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 81 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 140
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 141 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 172
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T + FF + G
Sbjct: 173 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQDFKQFFMQFGR 221
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + + P + L G++I VK A
Sbjct: 222 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEIL-GKSIEVKKA 270
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 41 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 100
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L +F ++G+IE
Sbjct: 101 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 160
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 161 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 207
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 13/168 (7%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM-VK 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P Q K+++GG+S + T E +FF + G +
Sbjct: 60 EHFLDGKI---------IDPKRAIPRDEQEKTAKIFVGGVSQDATEEDFESFFAQFGRVI 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A ++ ++ + G+ I VK A
Sbjct: 111 DATLMMDKDTGRPRGFGFVTFDSDAAVERCLEYHPLEILGKPIEVKRA 158
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
K+FV G++ + T E + F G + + ++ DK TG+ RG+GF+T+
Sbjct: 84 KIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTF 131
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT +TL F +G + E ++ D TG+SRG+GF+T+++ S ++
Sbjct: 165 KMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDEVVKT 224
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ +V + FF ++G I
Sbjct: 225 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQYGTI 274
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGFVTY + +A + + G+ I +K A+
Sbjct: 275 IDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAE 324
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P KLFV L ++ S+ L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 110 PEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKK 169
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVP---DLAQRKLYIGGLSPEVTTEVLLNFFG 185
A+ ++ ++GRL N+A S P D A R +Y+G L +V + L F
Sbjct: 170 AVEKFNRYEVNGRLLTVNIAAPRGSRPERQPRQYDAAFR-IYVGNLPWDVDNDRLQQVFS 228
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
HG++ + V YD++T SRGFGFVT V A A+D + L GR I V +A+
Sbjct: 229 EHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAALD--GQNLEGRAIKVNVAE 284
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L +V ++ L F + G +E V Y++DT++SRGFGFVT TVE AKKAV
Sbjct: 112 EAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAV 171
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKPPQTQ 250
+ ++ + GR + V +A +G P+ Q
Sbjct: 172 EKFNRYEVNGRLLTVNIA-APRGSRPERQ 199
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+++V L W+ ++ L F HG++ + V+YD+ TG+SRG+GF+T + A+ A
Sbjct: 208 RIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAA 267
Query: 134 -PSKLIDGRLAVCNLACE 150
+ ++GR N+A E
Sbjct: 268 LDGQNLEGRAIKVNVAEE 285
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAISREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 162 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 221
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 222 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 271
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 272 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 321
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 40 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 99
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L +F ++G+IE
Sbjct: 100 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 159
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 160 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 206
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPP 289
+ V + + G HA P+ QN P
Sbjct: 183 NNSTVGGAYGKMNSECSHWGPHHA---PMNMIQGQNGKP 218
>gi|449276581|gb|EMC85043.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Columba livia]
Length = 271
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S + L
Sbjct: 1 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 61 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 114
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 115 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 160
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + +K ++
Sbjct: 1 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 60
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 61 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 94
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 129 SALRAPSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
L+ +DGR CN + S K+++GGL VT L FF
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSG----GFPKVFLGGLPSNVTETDLRTFFN 124
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA------ 239
R+G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 125 RYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSS 184
Query: 240 ----DTHKGK--PPQTQLP 252
D+H+G+ PPQ P
Sbjct: 185 SKMNDSHQGQWGPPQQGGP 203
>gi|149046813|gb|EDL99587.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b
[Rattus norvegicus]
Length = 300
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 189
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T+K T + +
Sbjct: 14 RKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKD-PKTVNIVM 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
+DG++ + A+P Q K+++GG+S E T +F + G
Sbjct: 73 VKEHYLDGKI---------IDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGR 123
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+++ EA +A + + G+ I VK A
Sbjct: 124 VVDATLMMDKDTGRPRGFGFVTFES-EAGVEACLSANLEIHGKPIEVKKA 172
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L A F GE+ E ++ D+ TG++RG+GF+ + +
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFAD-SGIAERVTL 65
Query: 134 PSKLIDGRLAVC---------NLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
+IDGR+ ++A + S + + RK+++GGL+ VT +F
Sbjct: 66 DKHMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYF 125
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRA----- 180
Query: 245 KPPQTQLPAAVVPVP 259
P+ Q P + P
Sbjct: 181 -VPKEQSPGPIARSP 194
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 64 SVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
S+ S P RK+FV GLA N T F G I + V+YD T + RG+GFITY
Sbjct: 95 SIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYD 154
Query: 123 HMESTQSALRAPSKLIDGRL 142
++ AL ++G++
Sbjct: 155 SEDAVDKALHKNFHELNGKM 174
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G + VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKKA 179
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W T+SE L F GE+ E ++ D +T +SRG+GFIT+K S L
Sbjct: 51 KIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSKVLET 110
Query: 134 PS--------KLIDGRLAVC--NLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+ K ID ++AV + +S P +R +++GGLS + T L +
Sbjct: 111 HAQEPIVLDDKNIDPKIAVPPKRPGNKVMSPPWTAPSQTKR-IFVGGLSSDSTEMDLQEY 169
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
F G I++ + YD++T+ RGFGFVT+ + + A+K + + G+ + VK+A +
Sbjct: 170 FQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEKVCSIQYHDIRGKKVEVKVAQS 227
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
+++FV GL+ ++T L F+ G I++ ++YD+ T + RG+GF+T+
Sbjct: 150 KRIFVGGLSSDSTEMDLQEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTF 198
>gi|2780748|dbj|BAA24361.1| hnRNP JKTBP [Homo sapiens]
gi|4512255|dbj|BAA75240.1| JKTBP1 [Homo sapiens]
Length = 301
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 189
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 90 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 123
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 24 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 83
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 84 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 143
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 144 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 196
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E T + FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQERTS-----------KIFVGGVSQEATEQDFKQFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKD+ RGFGFVT+ + A + + P + L G+ I VK A
Sbjct: 110 VDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEVKKA 157
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T + F G + + ++ DK +G+ RG+GF+T+ + ++ L
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSG 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 204 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 263
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 264 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 317
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK +++ + +G +K+A
Sbjct: 318 ELPMDTKTNERRGFCFITYTDEEPVKKLLENRYHQIGSGKCEIKVA 363
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 204 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 263
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQL 251
L G+ I K A KGK P ++
Sbjct: 264 KEHKLDGKLIDPKRAKALKGKEPPKKV 290
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +G+IE V D TG+SRG+ FI YK +S +
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 162
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+I+ + A K+++GGL+ E++ E + FFG+ G I E
Sbjct: 163 VSEHVINNKKVDPKKAKARYG-----------KIFVGGLTSEISDEEIKTFFGQFGNIVE 211
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 212 VEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 258
>gi|146197795|dbj|BAF57615.1| DAZ-associated protein [Dugesia japonica]
Length = 296
Score = 95.1 bits (235), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL +TT+E+L + F G++ E +V+ D TG+SRG+G++ Y E+ Q +
Sbjct: 16 KLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVMST 75
Query: 134 PSKL----IDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
L ID + CN+ +G S Q K+++GG++PE E L +FF + G
Sbjct: 76 KHHLEGKEIDPK--PCNVNMKGRS-------RRQLKIFVGGIAPEHNEETLRDFFKQFGN 126
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVK 237
I E ++ D+ + RGF FV + K+ ++D T+G + + +K
Sbjct: 127 ITELTLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIK 174
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T+K + +
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 167
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T E NFF + G
Sbjct: 168 EHYLDGKIIDPKRAIPREEQERTS-----------KIFVGGVSQEATEEDFTNFFKQFGR 216
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DK+T RGFGFVT+ A + P + L G+ I VK A
Sbjct: 217 VVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRGPLQIL-GKQIEVKRA 265
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 33 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 92
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L +F ++G+IE
Sbjct: 93 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 152
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 153 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 199
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT E+L F GE+ E V+ D ATG+SRG+GF+T+K + +
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 165
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T E NFF + G
Sbjct: 166 EHYLDGKIIDPKRAIPREEQERTS-----------KIFVGGVSQEATEEDFTNFFKQFGR 214
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DK+T RGFGFVT+ A + P + L G+ I VK A
Sbjct: 215 VVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRAPLQIL-GKQIEVKRA 263
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +AL
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVAAALC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 95.1 bits (235), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 4 PEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEK 63
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDL--AQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ + +DGRL N A + V P ++Y+G L +V L+ F
Sbjct: 64 AVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQLFSE 123
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGK 245
HG++ + V YD++T SRGFGFVT T E A+ ++L GR + V +A+ +
Sbjct: 124 HGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEE---R 180
Query: 246 PPQ 248
PP+
Sbjct: 181 PPR 183
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 40 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 99
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 100 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 153
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 154 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 208
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 40 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 99
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 100 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 131
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K+FV L ++ SE L F G +E VIY++ T SRG+GF+T +E ++
Sbjct: 146 PEEAKIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEK 205
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNFFGR 186
A+ + +DGR N A S P +++ ++Y+G L +V + L F
Sbjct: 206 AVEMLHRYDLDGRFLTVNKAAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSE 265
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
HG++ V +D++TN SRGFGFVT T + A A+D + L GR I V +A+
Sbjct: 266 HGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALD--GQNLDGRPIRVNVAE 320
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+++G L +V +E L F + G +E V Y+++T+ SRGFGFVT TVE ++KAV
Sbjct: 148 EAKIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAV 207
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP 246
+ H+ L GR + V A +P
Sbjct: 208 EMLHRYDLDGRFLTVNKAAPRGSRP 232
>gi|384250217|gb|EIE23697.1| hypothetical protein COCSUDRAFT_8654, partial [Coccomyxa
subellipsoidea C-169]
Length = 175
Score = 95.1 bits (235), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W T+ E L A F G + E V YD+ TG+ RG+GF+ ++ + + +
Sbjct: 8 KVFVGGLSWETSDEKLRAFFENFGTVLEAFVSYDRHTGRPRGFGFVVFED-PAVADKVVS 66
Query: 134 PSKLIDGRLAVCNLAC---EGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHG 188
ID R A E SG QR K+++GGL+P V VL +F R G
Sbjct: 67 LQHTIDRREVEAKKAVPKEEHPSGRVLDSSNPQRTKKIFVGGLAPSVDENVLKGYFERFG 126
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEA 217
E+E+ V YD D RGFGF+T+ T EA
Sbjct: 127 EVEDAVVMYDHDNKRPRGFGFITFSTEEA 155
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+++GGLS E + E L FF G + E V+YD+ T RGFGFV ++ A K V
Sbjct: 6 EAKVFVGGLSWETSDEKLRAFFENFGTVLEAFVSYDRHTGRPRGFGFVVFEDPAVADKVV 65
Query: 223 DDPHKTLGGRTIIVKLADTHKGKP 246
H T+ R + K A + P
Sbjct: 66 SLQH-TIDRREVEAKKAVPKEEHP 88
Score = 45.4 bits (106), Expect = 0.15, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+K+FV GLA + L F GE+E+ V+YD + RG+GFIT+ E+
Sbjct: 102 KKIFVGGLAPSVDENVLKGYFERFGEVEDAVVMYDHDNKRPRGFGFITFSTEEA 155
>gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens]
Length = 298
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 86
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 87 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 140
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 141 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 186
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 86
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 87 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 120
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P K+FV L ++ SE L F G +E VIY++ T +SRG+GF++ +E
Sbjct: 937 SEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEE 996
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
+ A+ + +DGRL N A S P + + ++Y+G L +V + L
Sbjct: 997 AEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQV 1056
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
F HG++ E V +D++T SRGFGFVT + +E A A D +TL GRTI V +A+
Sbjct: 1057 FSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDG--QTLDGRTIRVNVAE 1114
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+++G L +V +E L F + G +E V Y+++T+ SRGFGFV+ TVE A+KAV
Sbjct: 942 EAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAV 1001
Query: 223 DDPHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
D H+ L GR + V A + +PP+ PA
Sbjct: 1002 DMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPA 1036
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+++V L W+ S L F HG++ E V++D+ TG+SRG+GF+T + A+ A
Sbjct: 1038 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 1097
Query: 134 PS-KLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 1098 TDGQTLDGRTIRVNVAEE 1115
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E T + FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATEQEFKGFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 110 VDATLMIDKDTGRPRGFGFVTFDSEAAVENALSRPL-AICGKPIEVKKA 157
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T + F G + + ++ DK TG+ RG+GF+T+ + ++AL
Sbjct: 84 KIFVGGVSQEATEQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENALSR 143
Query: 134 PSKLIDGRLAVCNLACE 150
P LA+C E
Sbjct: 144 P-------LAICGKPIE 153
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K ES L
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEH 124
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE + + +F GEIE
Sbjct: 125 KEHRLDGRLIDPKKAM-------AMKKDPIKKIFVGGLNPEAGEDQIREYFETFGEIEAI 177
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ + G +K+A
Sbjct: 178 ELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIKIA 223
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 148 ACEGLSGVSAVPDLAQR-----KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTN 202
A +G V D++ K+++GGLS + + + L ++F + GE+ + ++ D +T
Sbjct: 43 ASKGEEDAGCVADISSPLTEGVKMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTG 102
Query: 203 ESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGF+ +K E+ K ++ L GR I K A K P
Sbjct: 103 RSRGFGFILFKDAESVDKVLEHKEHRLDGRLIDPKKAMAMKKDP 146
>gi|81917948|sp|Q9Z130.1|HNRDL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=JKT41-binding protein
gi|4514631|dbj|BAA75479.1| JKTBP [Mus musculus]
gi|18203892|gb|AAH21374.1| Heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
gi|74196730|dbj|BAE43104.1| unnamed protein product [Mus musculus]
gi|148688362|gb|EDL20309.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Mus
musculus]
Length = 301
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 189
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 95.1 bits (235), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 66
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 67 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 120
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 121 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 166
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+
Sbjct: 1 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 60
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K +D L G+ I K A K K P
Sbjct: 61 DKVMDQKEHKLNGKVIDPKRAKAMKTKEP 89
Score = 43.1 bits (100), Expect = 0.60, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 82 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 140
Query: 123 HMESTQSAL 131
E + +
Sbjct: 141 EEEPVKKIM 149
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT E+L F GE+ E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 161
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+L DG+L + A+P D +R K+++GG+S + T FF + G +
Sbjct: 162 EHQL-DGKL---------IDPKRAIPRDEQERTAKIFVGGVSQDATESDFKEFFMKFGRV 211
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ A ++ ++ P L G+ I VK A
Sbjct: 212 LDATLMMDKDTGRPRGFGFVTFDNDLAVERTLEGPLSIL-GKPIEVKRA 259
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 48 LSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYD 107
+ + G Q + A A RKLFV GL+W T+ + L F +G+IE V D
Sbjct: 15 VDQNGDQQDNGANGSGDSAPVRDDDRKLFVGGLSWETSDKELKEHFGQYGDIESINVKTD 74
Query: 108 KATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLY 167
TG+SRG+ FI YK +S + A +I+ + A K++
Sbjct: 75 PNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAK-----------ARHGKIF 123
Query: 168 IGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
+GGL+ E++ + + FFG+ G I + + +DK N+ +GF F+T+ + + + + P +
Sbjct: 124 VGGLTTEISDDEIKTFFGQFGNIVDVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQ 183
Query: 228 TLGGRTIIVKLA 239
T+ G+ + VK A
Sbjct: 184 TISGKEVDVKKA 195
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 153 SGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTY 212
SG SA RKL++GGLS E + + L FG++G+IE +V D +T SRGF F+ Y
Sbjct: 29 SGDSAPVRDDDRKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVY 88
Query: 213 KTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
K+ ++ K V + + + K A GK
Sbjct: 89 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGK 121
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
A ++K+ S D K+F+ GL W TT + L F +G + E ++ D TG+SRG+GF
Sbjct: 159 ARQVKADLSRD--INKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGF 216
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEV 175
+++ S ++ ++DG++ + A+P Q K +++GG+ P+V
Sbjct: 217 LSFADASSVDEVVKT-QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDV 266
Query: 176 TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTII 235
+ FF G I + + DKDT SRGFGF+TY + +A + + G+ I
Sbjct: 267 RPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIE 326
Query: 236 VKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAG 270
+K A+ P Q Q P P + G
Sbjct: 327 IKRAE-----PRQVQKQRTTNPSPTTQSGTFSNNG 356
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K++V L ++ SE L F G +E VIY++ TG+SRG+GF+T +E A+
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ I+GRL N A S V P + Y+G L +V LL F HGE+
Sbjct: 188 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEV 247
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
SV YD+++ SRGFGFV+ A+K+ +DD L G+ +
Sbjct: 248 VNASVVYDRESGRSRGFGFVSM----ASKEELDDAISALDGQEL 287
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+Y+G L +V +E L F + G +E V Y+++T +SRGFGFVT T+E A KA++
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 225 PHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
++ + GR + V A + +PP+ PA
Sbjct: 188 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPA 220
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K++V L ++ SE L F G +E VIY++ TG+SRG+GF+T +E A+
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ I+GRL N A S V P + Y+G L +V LL F HGE+
Sbjct: 189 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEV 248
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
SV YD+++ SRGFGFV+ A+K+ +DD L G+ +
Sbjct: 249 VNASVVYDRESGRSRGFGFVSM----ASKEELDDAISALDGQEL 288
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+Y+G L +V +E L F + G +E V Y+++T +SRGFGFVT T+E A KA++
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 225 PHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
++ + GR + V A + +PP+ PA
Sbjct: 189 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPA 221
>gi|349604934|gb|AEQ00343.1| Heteroproteinous nuclear ribonucleoprotein D-like-like protein,
partial [Equus caballus]
Length = 297
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 26 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 85
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 86 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 139
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 140 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 185
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 26 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 85
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 86 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 119
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 198 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 257
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ Q L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 258 TVQKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 312
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 313 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 372
Query: 244 GKPPQTQL 251
P QL
Sbjct: 373 AVTPAAQL 380
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 41/267 (15%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL--- 131
+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY + L
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 132 --RAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRH 187
SK ID ++A A P L R K+++GGLS T E + +F +
Sbjct: 61 RHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 111
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
G++++ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 112 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQPK 166
Query: 248 QTQLPAAVV---PVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPNTAPVP 304
+ P +P G G +GY P + T++YTS + + +
Sbjct: 167 EVMTPTGSARGRSRVMPYGMDTFMLGIGM-----LGY------PGFQTTTYTSRSYSGI- 214
Query: 305 YPTQPPISY--PPIPLKKDPIGPIGHP 329
P +Y P L++ P+ HP
Sbjct: 215 ---APGYTYQFPEFHLERTPLLTSSHP 238
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NTT E + F G++++ +++DK T + RG+GF+T+++ + +
Sbjct: 88 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 148 IHFHEINNKMVECKKA 163
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S L
Sbjct: 66 KMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEH 125
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE + + +F GEIE
Sbjct: 126 KEHRLDGRLIDPKKAM-------AMKKEPIKKIFVGGLNPEAGEDKIREYFETFGEIEAV 178
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + G +K+A
Sbjct: 179 ELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKIA 224
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K ++
Sbjct: 66 KMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEH 125
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K +P
Sbjct: 126 KEHRLDGRLIDPKKAMAMKKEP 147
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++ +
Sbjct: 194 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 253
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR------KLYIGGLSPEVTTEVLL 181
L+ P +DG+ + A P R K+++GG+S + + E +
Sbjct: 254 DKVLKVPIHTLDGK---------KIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVK 304
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A
Sbjct: 305 AYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQP 364
Query: 242 HKGKPPQTQL 251
+ P QL
Sbjct: 365 KEAVTPAAQL 374
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT + L A F G+I + V+ D T +SRG+GFITY H
Sbjct: 21 TEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSM 80
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A +A IDGR+ A S +KL++G L + + L ++F
Sbjct: 81 VDEAQKARPHKIDGRVVEPKRAVPRQEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQH 140
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 141 YGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 193
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W+TT + L F +G + + ++ D ATG+SRG+GF++++ S ++
Sbjct: 163 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 222
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 223 -QHILDGKV---------IDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTI 272
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT +SRGFGFVTY + +A + + R I +K A+
Sbjct: 273 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 322
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGL P+++ + + +FF ++G I E
Sbjct: 119 AGDHVINNKKVDPKKAK-----------ARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVE 167
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 168 VEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 58 DRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVL 117
Query: 223 DDPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 118 SAGDHVINNKKVDPKKAKARHGK 140
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|428182299|gb|EKX51160.1| hypothetical protein GUITHDRAFT_66239, partial [Guillardia theta
CCMP2712]
Length = 184
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ--SAL 131
KLF+ GL+W+TT L A F G++ + V+ D+ATGK +G+GF+ + + + SA+
Sbjct: 1 KLFIGGLSWDTTEHDLGAYFETFGKLYDVVVMRDRATGKGKGFGFVRFHDPKVAEQVSAI 60
Query: 132 RAP--SKLIDGRLAVCNLACEGLSGVSAVP-DLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
R +L+D +LA+ + VP D+ K+++GGL+P V +F R G
Sbjct: 61 RHDIRGRLLDAKLAIPRKRVQH----PLVPSDIRVHKVFVGGLAPTVKDFEFREYFSRFG 116
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQ 248
I+E V D+ T SRGFGF+T++ E ++ + GR +V+ + G P
Sbjct: 117 NIKEAQVCTDQHTRRSRGFGFITFEKWETVEELISQQQD---GRPHVVEGKEVEVG--PS 171
Query: 249 TQLPAAVVPVPLP 261
+ + V PLP
Sbjct: 172 SIPRSLEVSPPLP 184
>gi|426219507|ref|XP_004003963.1| PREDICTED: uncharacterized protein LOC101101951 [Ovis aries]
Length = 503
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 6/169 (3%)
Query: 71 VHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA 130
+ K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S
Sbjct: 289 ISSKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 348
Query: 131 LRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
L +DG+L A + L+G +K+++G LSP+ + E + +FG GEI
Sbjct: 349 LELKEHKLDGKLIDPKRA-KALNGKEP-----PKKVFVGVLSPDTSEEQIKEYFGAFGEI 402
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
E + D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 403 ENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 451
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 159 PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
P K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K +
Sbjct: 286 PTFISSKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASV 345
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K ++ L G+ I K A GK P
Sbjct: 346 DKVLELKEHKLDGKLIDPKRAKALNGKEP 374
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+KLFV GL T E+L + + GEI + V+ D + KSRG+GF+T+K S A
Sbjct: 13 KKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQA 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDL--AQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DG+ A + P++ A +K+++GGL +VT + L +FG++G +
Sbjct: 73 NRPHKLDGKEVDSKRA---MPREETSPEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTV 129
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTH------KG 244
+ + KDTN SRGF FVT+ ++ K + T+ G V+ A + +
Sbjct: 130 TDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKADVRKALSREEMNKVRS 189
Query: 245 KPPQTQL 251
KPP ++
Sbjct: 190 KPPPARV 196
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 43.1 bits (100), Expect = 0.66, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HMESTQSAL 131
E + +
Sbjct: 213 EEEPVKKIM 221
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 137 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 236
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 137 KEHKLNGKVIDPKRAKAMKTKEP 159
Score = 43.1 bits (100), Expect = 0.66, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 152 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 210
Query: 123 HMESTQSAL 131
E + +
Sbjct: 211 EEEPVKKIM 219
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 43.1 bits (100), Expect = 0.66, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HMESTQSAL 131
E + +
Sbjct: 213 EEEPVKKIM 221
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 49 GNQNGAEGDQINASKNEEDAG-KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 107
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S + L +DGR+ A A+ +K+++GGL
Sbjct: 108 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGL 160
Query: 172 SPEV-TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLG 230
+PE T E + +FG GEIE + D N+ RGF F+T+K E KK ++ T+
Sbjct: 161 NPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVS 220
Query: 231 GRTIIVKLA 239
G +K+A
Sbjct: 221 GSKCEIKVA 229
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 130 KEHRLDGRVIDPKKAMAMKKDP 151
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 20 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 79
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + + ++F
Sbjct: 80 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 139
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 140 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 192
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+F+ GL+W T++E L F G++ E V+ D T +SRG+GF+T+ S L
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+ +DG+ +A A P + R K+++GGLS T + + +F + G +
Sbjct: 62 SAPHELDGKKIDPKVAFPR----RAHPKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRV 117
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E+ + +DK TN RGF FVT+++ + K + + I K+ + K +P +
Sbjct: 118 EDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCE-----IHFHEINNKMVECKKAQPKEVM 172
Query: 251 LP 252
LP
Sbjct: 173 LP 174
>gi|332374124|gb|AEE62203.1| unknown [Dendroctonus ponderosae]
Length = 290
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI ++ S
Sbjct: 50 RKLFVGGLSWETTDKELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDAASIDRVSA 109
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
A I+G+ P A+ K+++GG+SPE++ + + +FG++G
Sbjct: 110 AGEHTINGK--------------KVDPKKAKARHGKIFVGGISPELSDDDINEYFGQYGT 155
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQ 248
I E + +DK N+ +GF F+T+++ + + P + + + + VK A KP Q
Sbjct: 156 IMEVEMPFDKQKNQRKGFCFITFESEQVVADLLKRPKQVIKDKEVDVKKATP---KPDQ 211
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT+E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ GR+ V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGRSCEVRKA 180
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEVH 119
>gi|327272896|ref|XP_003221220.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Anolis
carolinensis]
Length = 311
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S + L
Sbjct: 41 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 100
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 101 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGGFGEIENI 154
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 155 ELPMDTKTNERRGFCFITYSDEEPVKKLLESRYHQIGSGKCEIKVA 200
>gi|148235805|ref|NP_001079609.1| heterogeneous nuclear ribonucleoprotein D-like-A [Xenopus laevis]
gi|82241529|sp|Q7ZX83.1|HNDLA_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-A;
Short=hnRNP D-like A; Short=hnRNP DL-A
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis]
Length = 293
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 7/185 (3%)
Query: 56 PSIAEEIKSVASADPVHR-KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSR 114
P E K AS + K+F+ GL+W+T+ + L GE+ + + D TG+SR
Sbjct: 8 PDFNEGSKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSR 67
Query: 115 GYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPE 174
G+GF+ +K S L +DG+L A + L G +K+++GGLSPE
Sbjct: 68 GFGFVLFKDAVSVDKVLETNEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPE 121
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
T E + +FG GEIE + D TNE RGF FVTY E KK ++ +G
Sbjct: 122 TTEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKC 181
Query: 235 IVKLA 239
+K A
Sbjct: 182 EIKAA 186
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 152 LSGVSAVPDL-------------AQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYD 198
++G A PD + K++IGGLS + + + L + R GE+ + ++ D
Sbjct: 1 MAGFGAAPDFNEGSKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTD 60
Query: 199 KDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
T SRGFGFV +K + K ++ L G+ I K A KGK PP+ + P
Sbjct: 61 PVTGRSRGFGFVLFKDAVSVDKVLETNEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 120
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT + L A F G+I + V+ D T +SRG+GFITY H
Sbjct: 20 TEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTM 79
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A +A IDGR+ A S +KL++G L + + L ++F
Sbjct: 80 IDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQH 139
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 140 FGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 192
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 4 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 63
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 64 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 123
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 124 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 181
Score = 62.8 bits (151), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 15 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 74
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 75 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 120
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA TT F +GEI + ++ D+ TG+ RG+GFITY + +
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 102
Query: 134 PSKLIDGR-LAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+ +I+G+ + + G G S D +K+++GG+ VT + +FF R+GE+++
Sbjct: 103 -THIINGKQVEIKRTIPRGAVG-SNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKD 160
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLADTHKGKPP 247
+ D TN SRGFGF+TY + EA + +K G + +K A+ K PP
Sbjct: 161 HQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPP 216
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV G+ T + F +GE+++ ++ D +T +SRG+GFITY E+ L
Sbjct: 132 KKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLS 191
Query: 133 APSKL 137
+K+
Sbjct: 192 VGNKI 196
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 7/213 (3%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKS-VASADPVHRKLFVRGLAWNTTS 86
S + + ++D ++ + + R+ + S + S A+A K+F+ GL+W+TT
Sbjct: 2 SANEITGIIDKITGIDVNKMKLRISNHRHSNSSPRHSEAATAQREEWKMFIGGLSWDTTK 61
Query: 87 ETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCN 146
+ L F GE+ + + D TG+SRG+GF+ +K ES + ++G++
Sbjct: 62 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAESVDKVMDQKEHKLNGKVIDPK 121
Query: 147 LACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
A + + V +K+++GGLSP+ E + +FG GE+E + D TN+ RG
Sbjct: 122 RA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRG 175
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F F+T+K E KK ++ + +G +K+A
Sbjct: 176 FCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 208
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 40 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEA 99
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 100 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 131
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 1 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 60
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 61 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 120
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 121 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 178
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 12 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 71
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 72 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 117
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVK 162
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
L DG+L + A+P D +R K+++GG+S + T + FF + G +
Sbjct: 163 EHSL-DGKL---------IDPKRAIPRDEQERTAKIFVGGVSQDATEQDFEAFFQKFGRV 212
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ A ++ ++ P L G+ I VK A
Sbjct: 213 LDATLMMDKDTGRPRGFGFVTFDNEMAVERTLEGPLAIL-GKPIEVKRA 260
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGL P+++ + + +FF ++G I E
Sbjct: 119 AGDHVINNKKVDPKKAK-----------ARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVE 167
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 168 VEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 119 AGDHVINNKKVDPKKAKARHGK 140
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RK+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T++ + +
Sbjct: 87 RKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMV 146
Query: 133 A----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
K+ID + A+ E S K+++GG+S E T E FF + G
Sbjct: 147 KEHYLDGKIIDPKRAIPREEQERTS-----------KIFVGGVSQEATEEDFTAFFKQFG 195
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DK+T RGFGFVT+ A + P + L G+ I VK A
Sbjct: 196 RVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLKGPLQIL-GKPIEVKRA 245
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 94.7 bits (234), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ T +SRG+GF+T +E
Sbjct: 113 PEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYNRETDRSRGFGFVTMSTVEEADK 172
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLA--QRKLYIGGLSPEVTTEVLLNFFGR 186
A+ + ++GRL N A S V P + ++Y+G L +V L+ F
Sbjct: 173 AVEMLHRYDVNGRLLTVNKAAPRGSRVDRPPRQSGPSLRIYVGNLPWQVDDSKLVQMFSE 232
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
HG++ + V YD++T SRGFGFVT T ++ A A+D ++L GR + V +A+
Sbjct: 233 HGKVVDARVVYDRETGRSRGFGFVTMATQDELDDAIAALDG--QSLDGRALRVNVAE 287
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+Y+G L +V +E L F + G +E V Y+++T+ SRGFGFVT TVE A KAV
Sbjct: 115 EAKVYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYNRETDRSRGFGFVTMSTVEEADKAV 174
Query: 223 DDPHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
+ H+ + GR + V A + +PP+ P+
Sbjct: 175 EMLHRYDVNGRLLTVNKAAPRGSRVDRPPRQSGPS 209
>gi|440898654|gb|ELR50102.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Bos grunniens mutus]
Length = 356
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 85 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 144
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 145 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 198
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 199 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 244
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 85 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 144
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 145 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 178
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGL P+++ + + +FF ++G I E
Sbjct: 119 AGDHVINNKKVDPKKAK-----------ARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVE 167
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 168 VEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 119 AGDHVINNKKVDPKKAKARHGK 140
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +GEIE V D TG+SRG+ FI + +S L
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGL P+++ + + +FF ++G I E
Sbjct: 119 AGDHVINNKKVDPKKAK-----------ARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVE 167
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + ++ + P +++ G+ + VK A
Sbjct: 168 VEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKA 214
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + F +GEIE +V D +T SRGF F+ + ++ K +
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 119 AGDHVINNKKVDPKKAKARHGK 140
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL + + + + + F +G I E + +DK + +G+ FIT++ + Q L
Sbjct: 138 HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL 197
Query: 132 RAPSKLIDGR 141
++P + I+G+
Sbjct: 198 KSPKQSINGK 207
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 40/265 (15%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSA--L 131
KLF+ G++W TT + L F+ GE+ E ++ D++TG++RG+GF+ + + L
Sbjct: 7 KLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERVVLL 66
Query: 132 RAPSKLIDGRLAVCNLAC--------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
R +IDG+L A L G S P +K+++GGL+ VT +
Sbjct: 67 R---HVIDGKLVEAKKAVPRDDHKSNSSLQGSSPGP-ANSKKIFVGGLASSVTEAEFKKY 122
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD+ T RGFGF++Y++ +A + + L G+ + VKLA
Sbjct: 123 FAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVPK- 181
Query: 244 GKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPNTAPV 303
P + Q+ G G + N Y Q P P SSY
Sbjct: 182 -DPVRNQMNVN--------GFGSNRISALLMN------EYTQGFTPSPISSYG------- 219
Query: 304 PYPTQPPISYPPIPLKKDPIGPIGH 328
+P + Y P + + P GH
Sbjct: 220 ---VKPEVRYSPGVVNRGGFSPFGH 241
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D+ KL+IGG+S E T + L ++F GE+ E + D+ T +RGFGF+ + A+
Sbjct: 2 DMESGKLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAE 61
Query: 220 KAVDDPHKTLGGRTIIVKLA---DTHK 243
+ V H + G+ + K A D HK
Sbjct: 62 RVVLLRH-VIDGKLVEAKKAVPRDDHK 87
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA + T F G I + V+YD+ T + RG+GFI+Y+ ++ LR
Sbjct: 103 KKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLR 162
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVP-DLAQRKLYIGGLSPEVTTEVLLN 182
++G++ L AVP D + ++ + G + +L+N
Sbjct: 163 RTFHELNGKMVEVKL---------AVPKDPVRNQMNVNGFGSNRISALLMN 204
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++ +
Sbjct: 221 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 280
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR------KLYIGGLSPEVTTEVLL 181
L+ P +DG+ + A P R K+++GG+S + + + +
Sbjct: 281 DKVLKVPIHTLDGK---------KIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVK 331
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A
Sbjct: 332 AYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQP 391
Query: 242 HKGKPPQTQL 251
+ P QL
Sbjct: 392 KEAVTPAAQL 401
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 2 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 61
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 62 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 121
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 122 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 179
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 13 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 73 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 118
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV LA++ S+ L F G +E VIY++ T +SRG+GF+T ++ ++A+
Sbjct: 132 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 191
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ ++GRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 192 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKV 251
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGKPPQ 248
E V YD++T SRGFGFVT V+ +A+ + L GR I V +A+ +PP+
Sbjct: 252 VEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEE---RPPR 307
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT +V+ A+ AV
Sbjct: 130 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 189
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 190 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 224
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 66
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 67 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 126
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 127 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 173
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 66
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 67 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 112
>gi|171451952|dbj|BAG15904.1| musashi [Dugesia japonica]
Length = 463
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 24/190 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL-R 132
K+F+ GL+ T+ ET+ FR +G+I+E ++ D T +SRG+GF+T+ S + L +
Sbjct: 29 KMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFFESSSVKKVLNK 88
Query: 133 AP----SKLIDGRLAV------------CNLACEGLSGVSA-------VPDLAQRKLYIG 169
P SK ID ++AV +L C G++G S + +K++IG
Sbjct: 89 TPHILDSKKIDPKVAVPRKVETSTKNCESSLDCIGINGYSTGKLGDSNMISTKTKKVFIG 148
Query: 170 GLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTL 229
G+S T + L +F + G +E + DK T+ RGFGFVT++ + A+K D L
Sbjct: 149 GISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAEKVCDIHFHDL 208
Query: 230 GGRTIIVKLA 239
+T+ K A
Sbjct: 209 NNKTVEAKKA 218
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
+K+F+ G++ NTT + L F G +E ++ DKAT + RG+GF+T+++ ++ +
Sbjct: 143 KKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAE 198
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 62.0 bits (149), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 43.1 bits (100), Expect = 0.70, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HMESTQSAL 131
E + +
Sbjct: 213 EEEPVKKIM 221
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++ +
Sbjct: 181 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 240
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR------KLYIGGLSPEVTTEVLL 181
L+ P +DG+ + A P R K+++GG+S + + E +
Sbjct: 241 DKVLKVPIHTLDGK---------KIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVK 291
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A
Sbjct: 292 AYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQP 351
Query: 242 HKGKPPQTQL 251
+ P QL
Sbjct: 352 KEAVTPAAQL 361
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
++ D A KL++GGLS + ++E L +F G + + + D T SRGFGF+T++
Sbjct: 179 SLSDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 238
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQ 248
K + P TL G+ I K A T K +P Q
Sbjct: 239 TVDKVLKVPIHTLDGKKIDPKHA-TPKNRPRQ 269
>gi|444721584|gb|ELW62314.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 301
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 30 KLFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 90 KEHKLDGKLIGPQRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ +G VK+A
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRCHQIGSGKCEVKIA 189
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
KL+IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 30 KLFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I + A KGK PP+ + P
Sbjct: 90 KEHKLDGKLIGPQRAKALKGKEPPKKVFVGGLSP 123
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 9 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 69 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 129 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 175
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 9 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 68
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 69 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 114
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 86/165 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ALPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVK 237
V D+ + + RGF FVT+ + K V + T+ G VK
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVK 199
Score = 56.2 bits (134), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T + L F + G + + V D T SRGFGFVTY VE A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 224 D-PHKTLGGRTIIVKLA 239
PHK + GR + K A
Sbjct: 95 ALPHK-VDGRVVEPKRA 110
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 182 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 241
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 242 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 295
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 296 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 350
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+
Sbjct: 185 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 244
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
K +D L G+ I K A K K P ++
Sbjct: 245 DKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKI 277
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEV-TTEVLLNFFGRHGEIEE 192
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 129 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEA 181
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 182 IELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVA 228
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 129 KEHRLDGRVIDPKKAMAMKKDP 150
>gi|108744009|gb|ABG02277.1| heterogeneous nuclear ribonucleoprotein A/B [Haplochromis burtoni]
Length = 316
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDKVLEQ 116
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR N+ + + P +K+++GGL+PE T E + +FG GEIE
Sbjct: 117 KEHRLDGR----NIDPKRAMAMKKDP---VKKIFVGGLNPEATEETIREYFGAFGEIETI 169
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D + + RGF F+TYK + KK ++ + + G +K+A
Sbjct: 170 ELPIDPKSKKRRGFIFITYKEETSVKKCLEKKYHNIQGGRCELKIA 215
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGFV +K + K ++
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDKVLEQ 116
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 117 KEHRLDGRNIDPKRAMAMKKDPVKKIFVGGLNP 149
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T ET+ F GEIE + D + K RG+ FITYK S +
Sbjct: 137 DPV-KKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVK 195
Query: 129 SALRAPSKLIDGRLAVCNL 147
L I G C L
Sbjct: 196 KCLEKKYHNIQG--GRCEL 212
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 94.4 bits (233), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S + L
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 91 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 144
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 145 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 190
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + +K ++
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 91 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 124
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + Q L++
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHVLQS 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNA 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+ V LG G HA
Sbjct: 183 NNSTVGGAYSKLGNECSHWGPPHA 206
>gi|255585793|ref|XP_002533576.1| RNA binding protein, putative [Ricinus communis]
gi|223526553|gb|EEF28811.1| RNA binding protein, putative [Ricinus communis]
Length = 284
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL T + L F +G+++E ++ DK TG SRG+GF+T++ + +A R
Sbjct: 7 KLFVGGLNSKTDGDYLNLHFSKYGQVKETLIVMDKETGSSRGFGFVTFEDHSAADTAFRD 66
Query: 134 P----SKLIDGRLAVCNLACEGLSGVSAVP-------------DLAQRKLYIGGLSPEVT 176
K +D + A C + + +L +K+++GGL +++
Sbjct: 67 QHFILGKKVDVKWATPRNPCHNSQEQNTIDPIQSNGDENDNRIELRTKKIFVGGLPHDIS 126
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
E +FF G + + V Y+ T SRGFGFVT+ + ++A + + + L I V
Sbjct: 127 NEEFKDFFSTFGTVRDAVVMYNGVTGRSRGFGFVTFDSEDSADTVLRNKYYQLKDCQIEV 186
Query: 237 KLADTHKGKPPQTQLPAAVVPVPL 260
K+A Q+Q +VP L
Sbjct: 187 KMAKPRSENDKQSQSHNQMVPYYL 210
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL + ++E F G + + V+Y+ TG+SRG+GF+T+ +S + LR
Sbjct: 114 KKIFVGGLPHDISNEEFKDFFSTFGTVRDAVVMYNGVTGRSRGFGFVTFDSEDSADTVLR 173
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 20 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 79
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 80 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 133
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 134 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 188
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 20 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 79
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 80 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 111
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 59 AEEIKSVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
A ++ S + D H K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+
Sbjct: 5 ASQVTSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGF 64
Query: 117 GFITYKHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIG 169
GFIT+ + S L P SK ID ++A A P + R K+++G
Sbjct: 65 GFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVG 115
Query: 170 GLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTL 229
GLS E + +F + G++E+ + +DK TN RGFGFVT++ + +K + +
Sbjct: 116 GLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEI 175
Query: 230 GGRTIIVKLADTHKGK-PPQTQLPAAVVPVPLP---LGAG---YPQA----GKAHANTPP 278
+ + K A + PP T+ A +P + LG G YP G+ + P
Sbjct: 176 NNKMVECKKAQPKEVMFPPGTRGRARSLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFSP 235
Query: 279 VGYSYPQNVPPYPTSSY 295
SY P +P ++Y
Sbjct: 236 ---SYSYQFPGFPATAY 249
>gi|399218335|emb|CCF75222.1| unnamed protein product [Babesia microti strain RI]
Length = 436
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 101/175 (57%), Gaps = 12/175 (6%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL+ TT E+L F +GE+ + V+ + +G+SRG+GF+T+ ++ ++ L A
Sbjct: 38 IFVGGLSQVTTQESLRQHFETYGEMTDCVVMVEANSGRSRGFGFVTFVSHDALEAVL-AS 96
Query: 135 SKLIDGRLAVCNLACEGL---SGVSAVPDLAQ------RKLYIGGLSPEVTTEVLLNFFG 185
+++DG+ C AC S A+P AQ K+++GGL P++T E +F
Sbjct: 97 KQIVDGKEVDCKKACPREVMNSNNGALPKAAQVGVFRTDKIFVGGL-PDLTNEEFREYFE 155
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLA 239
+ G + E ++ DK+TN+ RGFGF+T+++ + + ++ TL G+ + VK A
Sbjct: 156 KFGTVLEATLMVDKNTNKPRGFGFITFESPSVVNEVIRRYNEHTLKGKWVEVKKA 210
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ GL W TT E L F +G + + ++ D +G+SRG+GF++++H S +++
Sbjct: 230 KLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDEVVKS 289
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GG+ P+V + FF + G I
Sbjct: 290 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTI 339
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + DKDT SRGFGF+TY + EA + + + + I +K A
Sbjct: 340 IDAQLMLDKDTGRSRGFGFITYDSGEAVDRVCQNKYIQFKDKQIEIKRA 388
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 94.4 bits (233), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K++V L ++ SE L F G +E VIY++ TG+SRG+GF+T +E A+
Sbjct: 17 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 76
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ I+GRL N A S V P + Y+G L +V LL F HGE+
Sbjct: 77 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEV 136
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
SV YD+++ SRGFGFV+ A+K+ +DD L G+ +
Sbjct: 137 VNASVVYDRESGRSRGFGFVSM----ASKEELDDAISALDGQEL 176
Score = 59.7 bits (143), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+Y+G L +V +E L F + G +E V Y+++T +SRGFGFVT T+E A KA++
Sbjct: 17 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 76
Query: 225 PHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
++ + GR + V A + +PP+ PA
Sbjct: 77 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPA 109
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 11 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 70
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 71 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 124
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 125 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 179
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 11 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 70
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 71 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 102
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 11 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 70
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 71 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 124
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 125 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 179
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 11 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 70
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 71 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 102
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L++
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQS 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+AV LG G HA
Sbjct: 183 NNSAVGGAYGKLGNECSHWGPHHA 206
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + G K+++GGLS E++ + + +FF + G I E
Sbjct: 114 AGDHIINNK-KVDPKKAKARHG----------KVFVGGLSTELSDDDIKHFFSQFGTIVE 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 163 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKA 209
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + + + K A GK
Sbjct: 111 IMAAGDHIINNKKVDPKKAKARHGK 135
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
A H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ +
Sbjct: 129 AKARHGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVV 188
Query: 128 QSALRAPSKLIDGR 141
L+ P + I+G+
Sbjct: 189 NELLKTPKQTINGK 202
>gi|432884676|ref|XP_004074535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Oryzias
latipes]
Length = 314
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 16/171 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES-----TQ 128
K+FV GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +Q
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKDAESVEKVASQ 116
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
+ K+ID + A + E + +K+++GGLSP+ E + +FG G
Sbjct: 117 KEHKLNGKVIDPKKAKAMKSKEPV-----------KKVFVGGLSPDTPEEKVREYFGAFG 165
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
E+E + + TN+ RGF F+T+K EA KK ++ + +G VK+A
Sbjct: 166 EVESIELPMENKTNKRRGFCFITFKEEEAVKKVMEKKYHNIGLSKCEVKVA 216
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ +K
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKDAESVEKVASQ 116
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 117 KEHKLNGKVIDPKKAKAMKSKEP 139
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ S +PV +K+FV GL+ +T E + F GE+E + + T K RG+ FIT+K
Sbjct: 132 KAMKSKEPV-KKVFVGGLSPDTPEEKVREYFGAFGEVESIELPMENKTNKRRGFCFITFK 190
Query: 123 HMESTQSAL 131
E+ + +
Sbjct: 191 EEEAVKKVM 199
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L A F GE+ E ++ D+ TG++RG+GF+ + +
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFAD-SGIAERVTL 65
Query: 134 PSKLIDGRLAVC---------NLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
+IDGR+ ++A + S + + RK+++GGL+ VT +F
Sbjct: 66 DKHMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYF 125
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRA----- 180
Query: 245 KPPQTQLPAAVVPVP 259
P+ Q P + P
Sbjct: 181 -VPKEQSPGPIARSP 194
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+ S P RK+FV GLA N T F G I + V+YD T + RG+GFITY
Sbjct: 94 SSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITY 153
Query: 122 KHMESTQSALRAPSKLIDGRL 142
++ AL ++G++
Sbjct: 154 DSEDAVDKALHKNFHELNGKM 174
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 167 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 226
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 227 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 281
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 282 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 341
Query: 244 GKPPQTQL 251
P QL
Sbjct: 342 AVTPAAQL 349
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + G K+++GGLS E++ + + +FF + G I E
Sbjct: 114 AGDHIINNK-KVDPKKAKARHG----------KVFVGGLSTELSDDDIKHFFSQFGTIVE 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 163 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKA 209
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + + + K A GK
Sbjct: 111 IMAAGDHIINNKKVDPKKAKARHGK 135
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
A H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ +
Sbjct: 129 AKARHGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVV 188
Query: 128 QSALRAPSKLIDGR 141
L+ P + I+G+
Sbjct: 189 NELLKTPKQTINGK 202
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M +A+
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L +F +G+IE
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 TEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E + A +KLFV G+ +T L F +G+IE +I DK +GK RG+
Sbjct: 84 AVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGF 143
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 144 GFVTFNDHDPVDKIVLQKYHTINGHNAEVRKA 175
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P+A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPSAHLTVKKIFVGGIKEDTEEH 119
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 48 LSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYD 107
+SR SQ PS +K K+FV G+ +T L F +G+IE ++ D
Sbjct: 90 VSREDSQRPSAHLTVK----------KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 139
Query: 108 KATGKSRGYGFITYKHMESTQSALRAPSKLIDG 140
+ +GK RG+ F+T+ +S + ++G
Sbjct: 140 RGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNG 172
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 197 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 256
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 257 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 311
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 312 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 371
Query: 244 GKPPQTQL 251
P QL
Sbjct: 372 AVTPAAQL 379
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA TT+ F +GEI + ++ D+ TG+ RG+GF+TY ++
Sbjct: 9 KIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQ- 67
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ +I+G+ GV D RK+++GG+ VT + FF + GE+ E
Sbjct: 68 DTHIINGKQVEIKRTIP--KGVVGSKDFRTRKIFVGGIPAVVTEDEFNEFFTQFGEVTEH 125
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
+ D TN SRGFGF+T+ T ++AVDD
Sbjct: 126 QIMRDHSTNRSRGFGFITFDT----EQAVDD 152
Score = 62.0 bits (149), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 153 SGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTY 212
SG A P K++IGGL+ E TT + FG++GEI + + D+ T + RGFGFVTY
Sbjct: 1 SGDGASPG----KIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTY 56
Query: 213 KTVEAAKKAVDDPHKTLGGRTIIVK 237
+ + D H + G+ + +K
Sbjct: 57 ADPSVVDQVIQDTH-IINGKQVEIK 80
Score = 46.6 bits (109), Expect = 0.059, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
V S D RK+FV G+ T + F GE+ E ++ D +T +SRG+GFIT+
Sbjct: 88 VGSKDFRTRKIFVGGIPAVVTEDEFNEFFTQFGEVTEHQIMRDHSTNRSRGFGFITFDTE 147
Query: 125 ESTQSALRAPSKL 137
++ L +KL
Sbjct: 148 QAVDDLLARGNKL 160
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G Q + ++I + + + K+FV GL+W+T+ + L F GE+ + + D TG
Sbjct: 32 GGQNGAEGDQI-NASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTG 90
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGL 171
+SRG+GFI +K S L +DGRL A A+ +K+++GGL
Sbjct: 91 RSRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAM-------AMKKDPIKKIFVGGL 143
Query: 172 SPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+PE + + +F GEIE + D TN+ RGF F+T+K E KK ++ + G
Sbjct: 144 NPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSG 203
Query: 232 RTIIVKLA 239
+K+A
Sbjct: 204 SKCEIKIA 211
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K ++
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 113 KEHRLDGRLIDPKKAMAMKKDP 134
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEV-TTEVLLNFFGRHGEIEE 192
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 129 KEHRLDGRVIDPKKAM-------AMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEA 181
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D N+ RGF F+T+K E KK ++ T+ G +K+A
Sbjct: 182 IELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVA 228
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K P
Sbjct: 129 KEHRLDGRVIDPKKAMAMKKDP 150
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++ S
Sbjct: 177 SDPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSV 236
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
L+ P +DG+ A +K+++GG+S + + E + +F +
Sbjct: 237 DKVLQVPIHTLDGKKIDPKHATP--KNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQF 294
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
G++EE + D+ T RGFGFVT++ + + + T+ + + K A + P
Sbjct: 295 GKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVAP 354
Query: 248 QTQ 250
Q
Sbjct: 355 TAQ 357
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 138 IDGRLAVCNLACEGLSGVSAVP----DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G A G S + P D A KL++GGLS + ++E L +FG G + +
Sbjct: 152 VNGCAKTGGNASNGSSSGRSTPNNGSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDV 211
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
+ D T SRGFGF+T++ + K + P TL G+ I K A T K +P
Sbjct: 212 LIMKDPVTQRSRGFGFITFQEPNSVDKVLQVPIHTLDGKKIDPKHA-TPKNRP 263
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 172
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S + + FF + G
Sbjct: 173 EHYLDGKIIDPKRAIPRDEQERTS-----------KIFVGGVSQDANEQDFKKFFMQFGR 221
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + + P + L G+ I VK A
Sbjct: 222 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKA 270
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E FF + G
Sbjct: 169 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEHDFKEFFAQFGR 217
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 218 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEIC-GKPIEVKKA 266
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L A F GE+ E ++ D+ TG++RG+GF+ + +
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFAD-SGIAERVTL 65
Query: 134 PSKLIDGRLAVC---------NLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
+IDGR+ ++A + S + + RK+++GGL+ VT +F
Sbjct: 66 DKHMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYF 125
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRA----- 180
Query: 245 KPPQTQLPAAVVPVP 259
P+ Q P + P
Sbjct: 181 -VPKEQSPGPIARSP 194
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+ S P RK+FV GLA N T F G I + V+YD T + RG+GFITY
Sbjct: 94 SSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITY 153
Query: 122 KHMESTQSALRAPSKLIDGRL 142
++ AL ++G++
Sbjct: 154 DSEDAVDKALHKNFHELNGKM 174
>gi|440905636|gb|ELR55990.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 180
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 6 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEGDAAMN 65
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 66 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 125
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 126 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 172
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 6 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEGDAAMN 65
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 66 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 111
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 199 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 258
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 259 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 313
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 314 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 373
Query: 244 GKPPQTQL 251
P QL
Sbjct: 374 AVTPAAQL 381
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 196 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 255
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 256 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 310
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Query: 244 GKPPQTQL 251
P QL
Sbjct: 371 AVTPAAQL 378
>gi|18399879|ref|NP_565526.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|20198217|gb|AAD25814.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|330252170|gb|AEC07264.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 382
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 72/118 (61%)
Query: 28 SQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSE 87
++ +++LL+ SK +L++L+ + + + + A D R +FVRGL W+TT E
Sbjct: 118 DKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVRGLGWDTTHE 177
Query: 88 TLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVC 145
L AAF V+GEI E +V+ DK TG+++G+GF+ +K + ++AL+ P K + R C
Sbjct: 178 NLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRMYNRTVSC 235
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
SA D +QR +++ GL + T E L F +GEI E SV DKDT ++GFGFV +KT
Sbjct: 155 SADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTR 214
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADT-HKGKPPQTQLPAAVVPVPL 260
+ A+ A+ +P K + RT+ A + GKP + Q P V + L
Sbjct: 215 KGARAALKNPEKRMYNRTVSCLPARPFNSGKPREQQQPVESVKIDL 260
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 85/159 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 23 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 82
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 83 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 142
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+ D+ + + RGF FVT+ ++ K V + T+ G
Sbjct: 143 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNG 181
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 23 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 82
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 83 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 128
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W T+ + L F +G+IE V D TG+SRG+ FI YK +S +
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 162
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGE 189
+I+ + P A+ K+++GGL+ E++ E + FFG+ G
Sbjct: 163 VSEHVINNK--------------KVDPKKAKARYGKIFVGGLTSEISDEEIKTFFGQFGN 208
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
I E + +DK N+ +GF F+T+ + + + + P +T+ G+ + VK A
Sbjct: 209 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA 258
>gi|21593807|gb|AAM65774.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 382
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 72/117 (61%)
Query: 29 QDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSET 88
++ +++LL+ SK +L++L+ + + + + A D R +FVRGL W+TT E
Sbjct: 119 KEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVRGLGWDTTHEN 178
Query: 89 LCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVC 145
L AAF V+GEI E +V+ DK TG+++G+GF+ +K + ++AL+ P K + R C
Sbjct: 179 LKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRMYNRTVSC 235
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
SA D +QR +++ GL + T E L F +GEI E SV DKDT ++GFGFV +KT
Sbjct: 155 SADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTR 214
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADT-HKGKPPQTQLPAAVVPVPL 260
+ A+ A+ +P K + RT+ A + GK + Q P V + L
Sbjct: 215 KGARAALKNPEKRMYNRTVSCLPARPFNSGKTREQQQPVESVKIDL 260
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
+DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++ +
Sbjct: 216 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 275
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNFFG 185
L+ P +DG+ A P A +K+++GG+S + + E + +F
Sbjct: 276 DKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAYFS 330
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
+ G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 331 QFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAV 390
Query: 246 PPQTQL 251
P QL
Sbjct: 391 TPAAQL 396
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
++ D A KL++GGLS + ++E L +F G + + + D T SRGFGF+T++
Sbjct: 214 SLSDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 273
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQ 248
K + P TL G+ I K A T K +P Q
Sbjct: 274 TVDKVLKVPIHTLDGKKIDPKHA-TPKNRPRQ 304
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G+ W+TT E L F +G++ + ++ DK TG+ RG+GF+ + S A+
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFAD-PSVLDAVLQ 65
Query: 134 PSKLIDGRLAVCNLACE--------------GLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
IDGR A G S + +K+++GGL +T E
Sbjct: 66 EKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPSTLTEEG 125
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+F +G + + V YD++T RGFGF+++ T +A + + L G+ + VK A
Sbjct: 126 FRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRA 185
Query: 240 DTHKGKP 246
P
Sbjct: 186 LPKDANP 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D + KL++GG+ + T E L +F ++G++ + + DK T RGFGFV +
Sbjct: 2 DSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLD 61
Query: 220 KAVDDPHKTLGGRTIIVKLA----DTHKGKP 246
+ + H T+ GRT+ K A + H +P
Sbjct: 62 AVLQEKH-TIDGRTVEAKRALSREEQHTSRP 91
Score = 44.7 bits (104), Expect = 0.21, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL T E F +G + + V+YD+ T + RG+GFI++ ++ L
Sbjct: 110 KKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLH 169
Query: 133 APSKLIDGRL 142
++G+L
Sbjct: 170 KTFHDLNGKL 179
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 196 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 255
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 256 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 310
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Query: 244 GKPPQTQL 251
P QL
Sbjct: 371 AVTPAAQL 378
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T + L FR GE+ E ++ D+ATG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVV-M 65
Query: 134 PSKLIDGRLAVC---------NLACEGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNF 183
LIDGR N + S V+ P A+ +K+++GGL+ VT +
Sbjct: 66 EKHLIDGRNVEAKKAVPREDQNTLNKNSSSVNGSPGPARTKKIFVGGLASTVTESDFRKY 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
F + G I + V YD +T RGFGF+TY + EA + + L G+ + VK A
Sbjct: 126 FDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRA 181
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA T F G I + V+YD T + RG+GFITY E+ L
Sbjct: 106 KKIFVGGLASTVTESDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLH 165
Query: 133 APSKLIDGRL 142
++G++
Sbjct: 166 KTFHELNGKM 175
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 180 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 239
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 240 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 294
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 295 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 354
Query: 244 GKPPQTQL 251
P QL
Sbjct: 355 AVTPAAQL 362
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 127/307 (41%), Gaps = 51/307 (16%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 21 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 80
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 81 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 131
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 132 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 191
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPN 299
PP T+ LP + L +G GYP + G YP P Y SY P
Sbjct: 192 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY------GRGYPGFAPSY---SYQFPG 242
Query: 300 TAPV-------------------PYPTQPPISYPPIPLKKDPIGPIGHPATAPKRRIASI 340
Y QP P P +P P G P +A +
Sbjct: 243 FPAAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSPGPVADL 302
Query: 341 LGRVSSN 347
G S +
Sbjct: 303 YGPASQD 309
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 109 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 169 IHFHEINNKMVECKKA 184
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M +A+
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L +F +G+IE
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 TEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E + A +KLFV G+ +T L F +G+IE +I DK +GK RG+
Sbjct: 84 AVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGF 143
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 144 GFVTFNDHDPVDKIVLQKYHTINGHNAEVRKA 175
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W TT+ET F GE+ + ++ D+ TG RG+GF+T+ + L
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ D ++ + G RK+++GGL P + + L N+F +G+I E
Sbjct: 127 DHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEH 186
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH-KTLGGRTIIVKLAD 240
+ YD T SRGFGFVT++T ++ + D LG + + +K A+
Sbjct: 187 QIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAE 234
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+IK+V+ RK+FV GL + L F V+G+I E ++YD TG+SRG+GF+T
Sbjct: 149 DIKAVSKT----RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVT 204
Query: 121 YKHMES 126
++ +S
Sbjct: 205 FQTEDS 210
>gi|326918700|ref|XP_003205626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Meleagris gallopavo]
Length = 264
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S + L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 61 EHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENIE 114
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 115 LPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 159
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + +K ++
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELK 60
Query: 226 HKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 61 EHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 93
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 196 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 255
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 256 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 310
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Query: 244 GKPPQTQL 251
P QL
Sbjct: 371 AVTPAAQL 378
>gi|356560235|ref|XP_003548399.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 351
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 26 SSSQDHLRSLLDPLSKSQLVDLLSR----LGSQYPSIAEEIKSVASADPVHRKLFVRGLA 81
S + + + DP S S+ ++L +Q+ + I S D K+FV GLA
Sbjct: 67 SGGTEKVVRIWDPRSGSKTLNLKGHNKFYTATQFQMVGGNINSRQYNDTTSTKIFVGGLA 126
Query: 82 WNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGR 141
W T +T+ F GEI E VI DK TGKS+GYGF+T+K E+ +A + PS +IDGR
Sbjct: 127 WETQRDTMRRYFEQFGEILEAVVITDKNTGKSKGYGFVTFKDPEAAMNACQNPSPIIDGR 186
Query: 142 LAVCNLACEG 151
A CN+A G
Sbjct: 187 RANCNIAAIG 196
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D K+++GGL+ E + + +F + GEI E V DK+T +S+G+GFVT+K EAA
Sbjct: 114 DTTSTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGKSKGYGFVTFKDPEAAM 173
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLP 252
A +P + GR +A K +TQ P
Sbjct: 174 NACQNPSPIIDGRRANCNIAAIGANK-NRTQAP 205
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 22/195 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L ++ S L F G++E VIYDK TG+SRG+GF+T E+ ++A +
Sbjct: 100 KIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQ 159
Query: 134 PSKL-IDGRLAVCNL---------------ACEGLSGVSAVPDLAQRKLYIGGLSPEVTT 177
+ IDGR N + +G G ++ + ++Y+G L+ V
Sbjct: 160 FNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMD--SSNRVYVGNLAWSVDQ 217
Query: 178 EVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIV 236
+ L F G++ + V YD+D+ SRGFGFVTY + + A++ LGGR I V
Sbjct: 218 QQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRV 277
Query: 237 KLADTHKGKPPQTQL 251
A+ +PP+ Q
Sbjct: 278 SPAE---ARPPRRQF 289
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|257215987|emb|CAX83143.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215989|emb|CAX83144.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215991|emb|CAX83145.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215993|emb|CAX83146.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215995|emb|CAX83147.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215997|emb|CAX83148.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215999|emb|CAX83149.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216001|emb|CAX83150.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216003|emb|CAX83151.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216005|emb|CAX83152.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 168
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/150 (38%), Positives = 77/150 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL TT L + GEI + V+ D T +SRG+GFITYK E +A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
IDG+ A S + KL++GGL +VT E L +F ++G I E
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITE 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
V K++ ESRGFGFVT+ + KA+
Sbjct: 137 CEVVAWKESGESRGFGFVTFDDYDPVDKAI 166
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA-V 222
RKL+IGGL+P T L +F+ + GEI + V D TN SRGFGF+TYK E A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 223 DDPHKTLGGRTIIVKLA 239
+ PH+ + G+T+ K A
Sbjct: 77 NRPHE-IDGKTVEAKRA 92
>gi|323456730|gb|EGB12596.1| hypothetical protein AURANDRAFT_6078, partial [Aureococcus
anophagefferens]
Length = 151
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G+AW T E L F GEI + AV+ +KATG SRG+GF+TY + L
Sbjct: 7 KLFLGGIAWTTDEEALRHYFGQFGEIIDVAVMRNKATGVSRGFGFVTYARPGCVDAVL-G 65
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++DGR LA P K ++GGL V +F + G++ +
Sbjct: 66 RDHVLDGRRVDIKLAVPR----DRAPAPLSNKFFVGGLPSAVADPEFRGYFEQFGQLTDS 121
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKK 220
V D+ TN SRGFGFVTY EAA +
Sbjct: 122 IVMVDRGTNRSRGFGFVTYADPEAANR 148
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 162 AQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA 221
AQ KL++GG++ E L ++FG+ GEI + +V +K T SRGFGFVTY
Sbjct: 4 AQGKLFLGGIAWTTDEEALRHYFGQFGEIIDVAVMRNKATGVSRGFGFVTYARPGCVDAV 63
Query: 222 VDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPL 260
+ H L GR + +KLA +P P PL
Sbjct: 64 LGRDH-VLDGRRVDIKLA-----------VPRDRAPAPL 90
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
P+ K FV GL F G++ + V+ D+ T +SRG+GF+TY E+
Sbjct: 89 PLSNKFFVGGLPSAVADPEFRGYFEQFGQLTDSIVMVDRGTNRSRGFGFVTYADPEA 145
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPYKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 179
>gi|223647556|gb|ACN10536.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 344
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D+ TG+SRG+GFI +K S L
Sbjct: 82 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAVSVDKVLEQ 141
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL+P+ EV+ +FG GEIE
Sbjct: 142 KEHRLDGRQIDPKKAM-------AMKKEPVKKIFVGGLNPDTDKEVIQEYFGTFGEIETI 194
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T + RGF F+TYK KK ++ + G +K+A
Sbjct: 195 ELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIA 240
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 146 NLACEGLSGV--SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
N A EG G ++ + K+++GGLS + + + L ++F + GE+ + ++ D+ T
Sbjct: 61 NGATEGEGGQINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGR 120
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGF+ +K + K ++ L GR I K A K +P
Sbjct: 121 SRGFGFILFKEAVSVDKVLEQKEHRLDGRQIDPKKAMAMKKEP 163
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+ TT + L F +GEIE V D TG+SRG+ FI + ES +
Sbjct: 27 RKLFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKVVA 86
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
++G+ A Q K+++GGLSPE + E + FF + G + E
Sbjct: 87 FEDHTVNGKKVDPKKA-----------KARQGKIFVGGLSPETSDEEVKTFFEQFGNVVE 135
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
+ +DK N+ +GF F+TY + + + P +T+GG+ + VK A KP Q+
Sbjct: 136 MEMPFDKMKNQRKGFCFITYDSEAVVTELLKTPKQTVGGKEVDVKRATP---KPEGMQM 191
>gi|449458055|ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
sativus]
gi|449531145|ref|XP_004172548.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
sativus]
Length = 286
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 111/260 (42%), Gaps = 39/260 (15%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
D + K+FV GLAW T SET+ F GEI E VI DK TG+S+GYGF+T++ ES
Sbjct: 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESA 86
Query: 128 QSALRAPSKLIDGRLAVCNLACEG-----LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
+ A P+ +IDGR A CNLA G LS L Q +Y+GG+ P T
Sbjct: 87 RRACADPTPIIDGRRANCNLASLGRPRPPLS--YGTGRLRQPAVYVGGMQPNRGT----- 139
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP-----HKTLGGRTIIVK 237
+ G G + S AY + +G+ TY + +P + + G
Sbjct: 140 YIGNFGYQQPVSYAYQQGLAYPP-YGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSAS 198
Query: 238 LADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPP----VGYSYPQ----NVPP 289
H G+ QT +P G GY G H P + +S P P
Sbjct: 199 PTIYHYGQLGQT----------VPGGHGY---GAVHGYAMPSPQILQFSGPNVNALTSSP 245
Query: 290 YPTSSYTSPNTAPVPYPTQP 309
PT P+ P P QP
Sbjct: 246 MPTIQAPYPSGIPAPVAAQP 265
>gi|149521754|ref|XP_001512512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Ornithorhynchus anatinus]
gi|338723434|ref|XP_003364726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
gi|426231939|ref|XP_004009994.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Ovis
aries]
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens]
Length = 271
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 61 EHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENIE 114
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 115 LPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 159
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 226 HKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 61 EHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 93
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 15/211 (7%)
Query: 38 PLSKSQLVDLLSRLGSQYPSI-AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVH 96
P KS++ R Q A++ ++ A+P ++V GL+WN +E L + F+
Sbjct: 177 PAVKSEINGHGKRKADQEAQAPAKKSRTDGEAEPTAN-VYVGGLSWNVDNEWLASEFQSC 235
Query: 97 GEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVS 156
GE+ E V++D KS+G+GF+ +K E A+ IDGR C+ A E +
Sbjct: 236 GEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCDFAAEKTD--N 293
Query: 157 AVPDLAQR----------KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
V AQ+ LY+GGLS ++ + + FG G+I+ S+ D++T +G
Sbjct: 294 PVERRAQKFNDQRSAPAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKG 353
Query: 207 FGFVTYKTVEAAKKAVDDPH-KTLGGRTIIV 236
FG+V + V+ A A++ + K L GR I V
Sbjct: 354 FGYVEFADVDQATAALEAMNGKELSGRRIRV 384
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E FF + G
Sbjct: 169 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEHDFKEFFAQFGR 217
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 218 VIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEIC-GKPIEVKKA 266
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 73 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVEKVTDQ 132
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 133 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 186
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K EA KK ++ + +G +K+A
Sbjct: 187 ELPMDNKTNKRRGFCFITFKDEEAVKKIMEKKYHNVGLSKCEIKVA 232
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 148 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 206
Query: 123 HMESTQSAL 131
E+ + +
Sbjct: 207 DEEAVKKIM 215
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+++ D H K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 9 SLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTF 68
Query: 122 KHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
L SK ID ++A A P L R K+++GGLS
Sbjct: 69 VDQAGVDKVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
T E + +F + G++++ + +DK TN RGFGFVT++ + +K + + I
Sbjct: 120 TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEI 174
Query: 235 IVKLADTHKGKPPQTQLPAA 254
K+ + K +P + PA
Sbjct: 175 NNKMVECKKAQPKEVMSPAG 194
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 44 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 103
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + G K+++GGLS E++ + + NFF + G I E
Sbjct: 104 AGDHVINNK-KVDPKKAKARHG----------KIFVGGLSTELSDDDIKNFFSQFGTIVE 152
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + +T+ G+ + VK A
Sbjct: 153 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKA 199
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L F +G+IE +V D +T SRGF F+ + E+ K +
Sbjct: 44 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 103
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 104 AGDHVINNKKVDPKKAKARHGK 125
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 24 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 83
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 84 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 137
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 138 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 192
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 24 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 83
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 84 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 115
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 113 PEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEK 172
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVP--DLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ + ++GRL N A + V P + ++Y+G L +V L+ F
Sbjct: 173 AVEMFHRYDVNGRLLTVNKAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLVELFSE 232
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGK 245
HG++ + V YD+DT SRGFGFVT + E A+ ++L GR + V +A+ +
Sbjct: 233 HGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE---R 289
Query: 246 PPQ 248
PP+
Sbjct: 290 PPR 292
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 29/235 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W+T E L F G++ E ++ D+ TG++RG+GFI + ++
Sbjct: 7 KLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE 66
Query: 134 PSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLN 182
IDGR+ A +S + P RK+++GGL+ VT N
Sbjct: 67 KHN-IDGRMVEAKRAIPRDDQNIPSRNSVSSMHGSPGPDHTRKIFVGGLASTVTESDFKN 125
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTH 242
+F + G I + V YD +T RGFGF+TY + EA K + L G+ + VK A
Sbjct: 126 YFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNGKMVEVKRA--- 182
Query: 243 KGKPPQTQLPAAVVPVPL--PLGAGYPQAGKAHANTPPVGYSYPQNVPPYPTSSY 295
+P + P P PL +GY G + N+ GYS Q PP Y
Sbjct: 183 --------VPKELSPGPTRSPL-SGY-SYGLSRVNSLLNGYS--QGYPPNSVGGY 225
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 66 ASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
S P H RK+FV GLA T F G I + V+YD T + RG+GFITY
Sbjct: 99 GSPGPDHTRKIFVGGLASTVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSD 158
Query: 125 ESTQSALRAPSKLIDGRLAVCNLAC 149
E+ L ++G++ A
Sbjct: 159 EAVDKVLTKTFHELNGKMVEVKRAV 183
>gi|127138754|ref|NP_001076010.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Rattus
norvegicus]
gi|149046820|gb|EDL99594.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Rattus
norvegicus]
Length = 285
Score = 93.6 bits (231), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F G++ + + D TG+SRG+GF+ +K ES +
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 137 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 236
Score = 60.8 bits (146), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + G++ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 137 KEHKLNGKVIDPKRAKAMKTKEP 159
Score = 43.1 bits (100), Expect = 0.62, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 152 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 210
Query: 123 HMESTQSAL 131
E + +
Sbjct: 211 EEEPVKKIM 219
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 93.6 bits (231), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K E +
Sbjct: 39 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKVMEQ 98
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GEIE
Sbjct: 99 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGTFGEIEAI 152
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K + KK ++ + +G +K+A
Sbjct: 153 ELPMDNKTNKRRGFCFITFKEEDPVKKIMEKKYHNVGLSKCEIKVA 198
Score = 60.1 bits (144), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E K ++
Sbjct: 39 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKVMEQ 98
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 99 KEHKLNGKVIDPKRAKAMKTKEP 121
Score = 43.5 bits (101), Expect = 0.51, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GEIE + D T K RG+ FIT+K
Sbjct: 114 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGFCFITFK 172
Query: 123 HMESTQSAL 131
+ + +
Sbjct: 173 EEDPVKKIM 181
>gi|209155336|gb|ACI33900.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 348
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D+ TG+SRG+GFI +K L
Sbjct: 85 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAAGVDKVLEQ 144
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL+P+ EV+ +FG GEIE
Sbjct: 145 KEHRLDGRQIDPKKAM-------AMKKEPVKKIFVGGLNPDTEKEVIQEYFGTFGEIETI 197
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D T + RGF F+TYK KK ++ + G +K+A
Sbjct: 198 ELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIA 243
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 146 NLACEGLSGV--SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
N A EG G ++ + K+++GGLS + + + L ++F + GE+ + ++ D+ T
Sbjct: 64 NGASEGEGGQINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGR 123
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGF+ +K K ++ L GR I K A K +P
Sbjct: 124 SRGFGFILFKEAAGVDKVLEQKEHRLDGRQIDPKKAMAMKKEP 166
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ + L+
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 134 PSKLIDGRL---AVCN---LACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRH 187
+DGR CN L SG P K+++GGL VT L ++F R
Sbjct: 61 GPHQLDGRTIDPKPCNPRTLQKPKRSG--GFP-----KVFLGGLPSNVTETDLRSYFTRF 113
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA-------D 240
G++ E + YD++ +SRGFGF++++ EA + V + L G+ + +K A D
Sbjct: 114 GKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAESSSKMND 173
Query: 241 THKGK--PPQTQLP 252
+H+G+ PPQ P
Sbjct: 174 SHQGQWGPPQQGGP 187
>gi|221487324|gb|EEE25556.1| RNA binding protein, putative [Toxoplasma gondii GT1]
Length = 458
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 25 SSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNT 84
S +++D R+ P+S + R GS + A+A K+FV L T
Sbjct: 56 SEATRDVRRTSRAPISATGRDRGDLRSGSH---------AAANAQSEENKIFVGNLNQQT 106
Query: 85 TSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGR-LA 143
T+ETL A + G +E+ V+ DK TG SRG+GF+T+ S S + A +IDG+ +
Sbjct: 107 TTETLSAYMKQFGAVEDVVVMVDKVTGNSRGFGFVTFADASSVTSCVGAEKHVIDGQEVD 166
Query: 144 VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF--GRHGEIEEGSVAYDKDT 201
V N +G D K+++GG+ PE TE L+ F R G +++ S+ +DK+T
Sbjct: 167 VRNAVPKGQMVNKNADDDQHSKVFVGGI-PETLTEERLSAFLSERFGSVKKVSLMHDKNT 225
Query: 202 NESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
RGFGFVT++ +A+ V + G I VK A+
Sbjct: 226 GRCRGFGFVTFQFPHSAQNCVGK--HDVDGHVIEVKKAE 262
>gi|47228465|emb|CAG05285.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 93.6 bits (231), Expect = 5e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+TT + L F +GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 58 KMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKDAESVEKVASQ 117
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + G V +K+++GGLSP+ E + +FG GE+E
Sbjct: 118 KEHKLNGKVIDPKKA-KAMKGKEPV-----KKIFVGGLSPDTPEEKVREYFGAFGEVESI 171
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + TN+ RGF F+T+K E K ++ +G +K+A
Sbjct: 172 ELPMETKTNKRRGFCFITFKEEEPVKCIMEKKFHNIGLSKCEIKVA 217
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + T + L ++F ++GE+ + ++ D T SRGFGFV +K E+ +K
Sbjct: 58 KMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKDAESVEKVASQ 117
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 118 KEHKLNGKVIDPKKAKAMKGKEP 140
Score = 42.0 bits (97), Expect = 1.5, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 60 EEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
++ K++ +PV +K+FV GL+ +T E + F GE+E + + T K RG+ FI
Sbjct: 130 KKAKAMKGKEPV-KKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMETKTNKRRGFCFI 188
Query: 120 TYKHMESTQ 128
T+K E +
Sbjct: 189 TFKEEEPVK 197
>gi|354497787|ref|XP_003511000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Cricetulus griseus]
gi|344249844|gb|EGW05948.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 271
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 61 EHKLDGKLIDPKRA-KALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFGAFGEIENIE 114
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 115 LPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 159
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 226 HKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 61 EHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 93
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 42 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 101
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 102 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 155
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 156 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 210
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 42 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 101
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQL 251
E+ K +D L G+ I K A K K P ++
Sbjct: 102 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKI 137
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Rattus
norvegicus]
Length = 356
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A + L +K+++GG+ + L ++F ++G+IE
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSLKPGAHLTVKKIFVGGIKEDTEEYYLRDYFEKYGKIET 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V H T+ G VK A
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVQKYH-TINGHNCEVKKA 178
>gi|237829907|ref|XP_002364251.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211961915|gb|EEA97110.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|221507119|gb|EEE32723.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 458
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 25 SSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNT 84
S +++D R+ P+S + R GS + A+A K+FV L T
Sbjct: 56 SEATRDVRRTSRAPISATGRDRGDLRSGSH---------AAANAQSEENKIFVGNLNQQT 106
Query: 85 TSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGR-LA 143
T+ETL A + G +E+ V+ DK TG SRG+GF+T+ S S + A +IDG+ +
Sbjct: 107 TTETLSAYMKQFGAVEDVVVMVDKVTGNSRGFGFVTFADASSVTSCVGAEKHVIDGQEVD 166
Query: 144 VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF--GRHGEIEEGSVAYDKDT 201
V N +G D K+++GG+ PE TE L+ F R G +++ S+ +DK+T
Sbjct: 167 VRNAVPKGQMVNKNADDDQHSKVFVGGI-PETLTEERLSAFLSERFGSVKKVSLMHDKNT 225
Query: 202 NESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
RGFGFVT++ +A+ V + G I VK A+
Sbjct: 226 GRCRGFGFVTFQFPHSAQNCVGK--HDVDGHVIEVKKAE 262
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 376 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 435
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 436 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 489
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 490 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 544
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+
Sbjct: 379 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 438
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K +D L G+ I K A K K P
Sbjct: 439 DKVMDQKEHKLNGKVIDPKRAKAMKTKEP 467
>gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Length = 285
Score = 93.2 bits (230), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F G++ + + D TG+SRG+GF+ +K ES +
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 137 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 236
Score = 60.8 bits (146), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + G++ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 137 KEHKLNGKVIDPKRAKAMKTKEP 159
Score = 43.1 bits (100), Expect = 0.66, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 152 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 210
Query: 123 HMESTQSAL 131
E + +
Sbjct: 211 EEEPVKKIM 219
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D RK+F+ GL W+T ++L F G + + ++ D T +SRG+GF+T+ +++S Q
Sbjct: 40 DEAQRKIFIGGLNWDTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQSVQ 99
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTE-VLLNFFGRH 187
+ +DG+L + + + +K+++GG+ + E V+ NF
Sbjct: 100 DVM-IRDHWLDGKL------IDPKRNMYRHENFKHKKIFVGGIPLTMPVEQVVENFESVF 152
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
G++ + ++ YDK+T SRGFGF+T++T + A+ AV + L G+++ VK T
Sbjct: 153 GQVTDANLMYDKETGRSRGFGFLTFETEQQAEDAVKEGRFDLEGKSVEVKRVQT 206
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+++ D H K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 9 SLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTF 68
Query: 122 KHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
L SK ID ++A A P L R K+++GGLS
Sbjct: 69 VDQAGVDKVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
T E + +F + G++++ + +DK TN RGFGFVT++ + +K + + I
Sbjct: 120 TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEI 174
Query: 235 IVKLADTHKGKPPQTQLPAA 254
K+ + K +P + PA
Sbjct: 175 NNKMVECKKAQPKEVMSPAG 194
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+++ D H K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 9 SLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTF 68
Query: 122 KHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
L SK ID ++A A P L R K+++GGLS
Sbjct: 69 VDQAGVDKVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
T E + +F + G++++ + +DK TN RGFGFVT++ + +K + + I
Sbjct: 120 TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEI 174
Query: 235 IVKLADTHKGKPPQTQLPAA 254
K+ + K +P + PA
Sbjct: 175 NNKMVECKKAQPKEVMSPAG 194
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T E L F GE+ E ++ D+ TG++RG+GFI + +
Sbjct: 7 KLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAE-PGVAERVTM 65
Query: 134 PSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+IDGR+ A S + + + RK+++GGL+ VT +
Sbjct: 66 DKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRY 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 126 FEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRA---- 181
Query: 244 GKPPQTQLPAAVVPVP 259
P+ Q P V P
Sbjct: 182 --VPKEQSPGPVARSP 195
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+ S PV RK+FV GLA N T F G I + V+YD T + RG+GFITY
Sbjct: 95 SSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITY 154
Query: 122 KHMESTQSALRAPSKLIDGRL 142
++ AL ++G++
Sbjct: 155 DSEDAVDKALHKNFHELNGKM 175
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|326936051|ref|XP_003214072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like, partial
[Meleagris gallopavo]
Length = 176
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 82/150 (54%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 21 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMN 80
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++FG++G+IE
Sbjct: 81 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEV 140
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ D+ + + RGF FVT+ ++ K V
Sbjct: 141 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 170
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY +VE A++
Sbjct: 21 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMN 80
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 81 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 126
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL TT L + GEI + V+ D T +SRG+GFITYK E +A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
IDG+ A S + KL++GGL +VT E L +F ++G I E
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITE 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVK 237
V K++ ESRGFGFVT+ + KA+ PH R + K
Sbjct: 137 CEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKK 182
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA-V 222
RKL+IGGL+P T L +F+ + GEI + V D TN SRGFGF+TYK E A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 223 DDPHKTLGGRTIIVKLA 239
+ PH+ + G+T+ K A
Sbjct: 77 NRPHE-IDGKTVEAKRA 92
>gi|432104101|gb|ELK30931.1| Heterogeneous nuclear ribonucleoprotein A/B [Myotis davidii]
Length = 308
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV L+W+T+ + L F GE+ + + D TG+SRG+GFI +K S + L
Sbjct: 1 MFVGHLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
+DGR+ A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 61 EHKLDGRVIDPKKAM-------AMKKEPVKKIFVGGLNPEATEEKIREYFGEFGEIEAID 113
Query: 195 VAYDKDTNESRGFGFVTYKTVEA-AKKAVDDPHKTLGGRTI 234
+ D +N+ RGF F+T+K E KK ++ T+ G I
Sbjct: 114 LPMDPKSNKRRGFVFITFKEEEEPVKKVLEKKFHTISGSKI 154
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
+++G LS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + +K +D
Sbjct: 1 MFVGHLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 226 HKTLGGRTIIVKLADTHKGKP 246
L GR I K A K +P
Sbjct: 61 EHKLDGRVIDPKKAMAMKKEP 81
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%)
Query: 44 LVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGA 103
++ +LS L S Y S + +K RKLF+ GL++ TT E+L + G++ +
Sbjct: 1 MLKILSILSSFYISSSVPVKRRRREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCV 60
Query: 104 VIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ 163
V+ D A+ +SRG+GF+T+ M +A+ A IDGR+ A +
Sbjct: 61 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTV 120
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+KL++GG+ + L ++F +G+I+ + D+ + + RGFGFVT+ + K V
Sbjct: 121 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 180
Query: 224 DPHKTLGGRTIIVKLA 239
+ T+ G V+ A
Sbjct: 181 QKYHTINGHNAEVRKA 196
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 89/167 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
R+LF+ GL++ TT+E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
R+L+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P KLFV L ++ SE L F G +E VIY++ T +SRG+GFIT +E
Sbjct: 87 SEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEE 146
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
+ A+ ++ ++GR N A S P + ++Y+G L +V L
Sbjct: 147 AEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQV 206
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
F HG++ + V YD+DT SRGFGFVT + + A A+D ++L GR I V +A+
Sbjct: 207 FSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALD--GQSLDGRAIRVNVAE 264
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L ++ +E L F G +E V Y+++T++SRGFGF+T TVE A+KAV
Sbjct: 92 EAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAV 151
Query: 223 DDPHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
+ ++ L GR + V A + +PPQ P+
Sbjct: 152 EMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPS 186
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++
Sbjct: 192 SGSDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 251
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ L+ P +DG+ A P A +K+++GG+S + + + + +
Sbjct: 252 TVDKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSADEVKAY 306
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 307 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 366
Query: 244 GKPPQTQL 251
P QL
Sbjct: 367 AVTPAAQL 374
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S + + FF + G
Sbjct: 71 EHYLDGKIIDPKRAIPRDEQERTS-----------KIFVGGVSQDANEQDFKKFFMQFGR 119
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + + P + L G+ I VK A
Sbjct: 120 VVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKA 168
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+++AD H K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 9 SLSTADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTF 68
Query: 122 KHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
L SK ID ++A A P L R K+++GGLS
Sbjct: 69 VDQAGVDKVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
T E + +F + G++++ + +DK TN RGFGFVT++ + +K +
Sbjct: 120 TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T E L +F ++GE++E V D T SRGFGFVT+ K +
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L +TI K+A + +P
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQP 102
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 25 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 84
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 85 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 138
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 139 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 193
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 25 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 84
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 85 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 116
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 18/234 (7%)
Query: 23 SSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAW 82
SS +SS LR+ P ++ Q + + + + A KLF+ G++W
Sbjct: 52 SSGNSSNGALRTGSSPNAQQQRGQSMYHRQQAENNYGDYANADTGAQKQPGKLFIGGVSW 111
Query: 83 NTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRL 142
TT ETL F +G + + A++ DK +G+ RG+GF+T+ + L S IDGR
Sbjct: 112 ETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEE-SHTIDGRT 170
Query: 143 AVCNLACEGLSGVSAVPDL----------------AQRKLYIGGLSPEVTTEVLLNFFGR 186
A S D+ +K+++GGL P VT + +F
Sbjct: 171 VEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEE 230
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
G I + V +D++T SRGFGFVT++ A + + H+ L G+ + +K A+
Sbjct: 231 FGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTHE-LHGKVVEIKRAE 283
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY +
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVE 77
Query: 129 SALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 128
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
++F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 129 HYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 183
Query: 242 HKGKPPQTQLPAA 254
K +P + P
Sbjct: 184 KKAQPKEVMTPTG 196
>gi|348531962|ref|XP_003453476.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 315
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ L F GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 57 KVFVGGLSWDTSKTDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDKVLEQ 116
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR N+ + + P +K+++GGL+PE T E + +FG GEIE
Sbjct: 117 KEHRLDGR----NIDPKRAMAMKKDP---VKKIFVGGLNPEATEETIREYFGAFGEIETI 169
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D + + RGF F+TYK + KK ++ + + G +K+A
Sbjct: 170 ELPIDPKSKKRRGFIFITYKEETSVKKCLEKKYHNIQGGRCELKIA 215
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + L ++F + GE+ + ++ D +T SRGFGFV +K + K ++
Sbjct: 57 KVFVGGLSWDTSKTDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDKVLEQ 116
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 117 KEHRLDGRNIDPKRAMAMKKDPVKKIFVGGLNP 149
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DPV +K+FV GL T ET+ F GEIE + D + K RG+ FITYK S +
Sbjct: 137 DPV-KKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVK 195
Query: 129 SALRAPSKLIDGRLAVCNL 147
L I G C L
Sbjct: 196 KCLEKKYHNIQG--GRCEL 212
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT++ S
Sbjct: 107 DPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVD 166
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
L+ P +DG+ A +K+++GG+S + + E + +F + G
Sbjct: 167 KVLQVPIHTLDGKKIDPKHATP--KNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFG 224
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQ 248
++EE + D+ T RGFGFVT++ + + + T+ + + K A + P
Sbjct: 225 KVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVAPT 284
Query: 249 TQ 250
Q
Sbjct: 285 AQ 286
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 44/270 (16%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W T+ + L F GE+ E ++ D+ATG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 134 PSKLIDGRLA------------VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDG++ V N + L G + +K+++GGL+ VT
Sbjct: 67 -KHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSN--SKKIFVGGLASSVTEAEFK 123
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G I + V YD T RGFGF++Y + EA K + L G+ + VKLA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLA-- 181
Query: 242 HKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGY---SYPQNVPPYPTSSYTSP 298
VP + L Q T + Y Q P P S Y
Sbjct: 182 --------------VPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYG-- 225
Query: 299 NTAPVPYPTQPPISYPPIPLKKDPIGPIGH 328
+P + Y P + P GH
Sbjct: 226 --------VKPEVRYSPAVGNRGGFSPFGH 247
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA + T F G I + V+YD T + RG+GFI+Y E+ L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 133 APSKLIDGRLAVCNLAC 149
++G++ LA
Sbjct: 166 KTFHELNGKMVEVKLAV 182
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+AV LG G HA
Sbjct: 183 NNSAVGGAYGKLGNECSHWGPHHA 206
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
GS P K+ A D K+F+ GL W TT ++L F GE+ E V+ D TG
Sbjct: 90 GSSTPPYGTVHKASAKDD---GKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTG 146
Query: 112 KSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYI 168
+SRG+GF+T+K + T + + +DG++ + A+P Q K+++
Sbjct: 147 RSRGFGFLTFKDAK-TVNIVMVKEHFLDGKI---------IDPKRAIPRDEQEKTSKIFV 196
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT 228
GG+S E T + ++F + G + + ++ DKDT RGFGFVT+++ + ++ P +
Sbjct: 197 GGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVPLE- 255
Query: 229 LGGRTIIVKLA 239
+ G+ + VK A
Sbjct: 256 IHGKPVEVKRA 266
>gi|40539059|gb|AAR87316.1| putative RNA binding protein [Oryza sativa Japonica Group]
Length = 291
Score = 93.2 bits (230), Expect = 6e-16, Method: Composition-based stats.
Identities = 78/282 (27%), Positives = 118/282 (41%), Gaps = 51/282 (18%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL- 131
RKLFV GL T L F +GE+ V+ D A+G SRG+GF+ + +T AL
Sbjct: 5 RKLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAATLRALA 64
Query: 132 --RAPSKLIDGRLAVCNLACEGLSGVSAVPDLA-------------QRKLYIGGLSPEVT 176
P+ + GR A P + Q+K+++GGL VT
Sbjct: 65 DDEMPNHVFRGRKVDVKRAERRHDHKQTSPSIKNQNDSVQKNQFIFQKKVFVGGLHETVT 124
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ L+++F + G I + V ++ TN +RGFGF+++ + EA K + + L GR + V
Sbjct: 125 VKDLISYFEKFGTITDAVVMRNRTTNRARGFGFISFDSHEAVCKILLNRFHNLNGRDVEV 184
Query: 237 KLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH----ANTPPVGYSYPQNVPPYPT 292
K+A +P Y +A H + P+ Y Y V +P
Sbjct: 185 KIA--------------------VPKSPTYSEAKYYHMRMDMSLSPITY-YDGMVHVHPY 223
Query: 293 SSYTSPNTAPVPYPTQP------PISYPPIPLKKDPIGPIGH 328
+ YT P+ + T PI Y GPIGH
Sbjct: 224 TPYTFGCVTPLAHLTHSGYGYGGPIDYSCYAYG----GPIGH 261
Score = 52.8 bits (125), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L +RKL++ GL + L F R+GE+ V D + SRGFGFV + A +
Sbjct: 2 LEERKLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAATLR 61
Query: 221 AVDD---PHKTLGGRTIIVKLAD---THKGKPPQTQ 250
A+ D P+ GR + VK A+ HK P +
Sbjct: 62 ALADDEMPNHVFRGRKVDVKRAERRHDHKQTSPSIK 97
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 93.2 bits (230), Expect = 6e-16, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G++ + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMT 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F +G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIET 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 134 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 180
Score = 40.0 bits (92), Expect = 6.3, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
+++ E + A +K+FV G+ +T L F +G+IE V+ D+ +GK RG+
Sbjct: 89 AVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGF 148
Query: 117 GFITYKHMESTQSALRAPSKLIDG 140
F+T+ ++ + I+G
Sbjct: 149 AFVTFDDHDTVDKIVVQKYHTING 172
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L N F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 329 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 388
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 389 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 442
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 443 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 497
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 162 AQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
AQR K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+
Sbjct: 332 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 391
Query: 219 KKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
K +D L G+ I K A K K P
Sbjct: 392 DKVMDQKEHKLNGKVIDPKRAKAMKTKEP 420
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 90 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 149
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 150 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 203
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 204 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 258
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 90 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 149
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 150 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 181
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY +
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVE 77
Query: 129 SALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 128
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 129 QYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 183
Query: 242 HKGKPPQTQLPAA 254
K +P + P
Sbjct: 184 KKAQPKEVMTPTG 196
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 46 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMG 105
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + G K+++GGLS E++ + + NFF + G I E
Sbjct: 106 AGDHVINNK-KVDPKKAKARHG----------KIFVGGLSTELSDDDIKNFFSQFGTIVE 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + +T+ G+ + VK A
Sbjct: 155 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKA 201
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L F +G+IE +V D +T SRGF F+ + E+ K +
Sbjct: 46 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMG 105
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ + + K A GK
Sbjct: 106 AGDHVINNKKVDPKKAKARHGK 127
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T E L F +G++ E ++ D+ATG++RG+GFI + ++ +
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-M 65
Query: 134 PSKLIDGRLAVCNLAC---------------EGLSGVSAVPDLAQRKLYIGGLSPEVTTE 178
+IDGR A + +S V +K+++GGL +T E
Sbjct: 66 EKHIIDGRTVEAKKAVPRDDQQVLKRHASPIQLMSPVHGGGGGRTKKIFVGGLPSSITEE 125
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL 238
N+F + G I + V YD +T RGFGF+T+ + +A + + L G+ + VK
Sbjct: 126 EFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKR 185
Query: 239 ADTHKGKPPQTQLPAAVVPVPLPLGAGY 266
A P+ P + PLP G Y
Sbjct: 186 A------VPKETSPVSNNRSPLPGGLNY 207
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 70 PVH-------RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
PVH +K+FV GL + T E F G I + V+YD T + RG+GFIT+
Sbjct: 101 PVHGGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFD 160
Query: 123 HMESTQSALRAPSKLIDGRLAVCNLAC-EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
++ L ++G+L A + S VS L GG S ++
Sbjct: 161 SDDAVDRVLHKTFHELNGKLVEVKRAVPKETSPVSNNRSPLPGGLNYGGGSNRISANSYF 220
Query: 182 NFF 184
N F
Sbjct: 221 NNF 223
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 129 SALRAPSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
L+ +DGR CN + S K+++GGL VT L +FF
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSG----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA------ 239
R G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSS 184
Query: 240 ----DTHKGK--PPQTQLP 252
D+H+G+ PPQ P
Sbjct: 185 SKMNDSHQGQWGPPQQGGP 203
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 129 SALRAPSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
L+ +DGR CN + S K+++GGL VT L +FF
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSG----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA------ 239
R G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSS 184
Query: 240 ----DTHKGK--PPQTQLP 252
D+H+G+ PPQ P
Sbjct: 185 SKMNDSHQGQWGPPQQGGP 203
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+AV LG G HA
Sbjct: 183 NNSAVGGAYGKLGNECSHWGPHHA 206
>gi|350540024|ref|NP_001232117.1| heterogeneous nuclear ribonucleoprotein D-like [Taeniopygia
guttata]
gi|197129483|gb|ACH45981.1| putative heterogeneous nuclear ribonucleoprotein D-like variant 1
[Taeniopygia guttata]
Length = 301
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S + L
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DG+L A + L G +K+++GGLSP+ + E + +FG GEIE
Sbjct: 91 KEHKLDGKLIDPKRA-KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 144
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN RGF F+TY E KK ++ + +G +K+A
Sbjct: 145 ELPMDTKTNXRRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 190
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + +K ++
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 225 PHKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L G+ I K A KGK PP+ + P
Sbjct: 91 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSP 124
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 45/253 (17%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+T+
Sbjct: 18 DPC--KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVD 75
Query: 129 SALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 76 KVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 126
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 127 QYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 181
Query: 242 HKGKPPQTQLP-------AAVVPVPLP---LGA---GYPQ------AGKAHANTPPVGYS 282
K +P + P A V+P + LG GYP AG+++ + P GY+
Sbjct: 182 KKAQPKEVMSPTGSSRGRARVMPYGMDAFMLGIGMLGYPGFQATTYAGRSYTSLTP-GYT 240
Query: 283 YPQNVPPYPTSSY 295
Y P P ++Y
Sbjct: 241 Y--QFPAIPLTAY 251
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 93.2 bits (230), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 113 PEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEK 172
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVP--DLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ + ++GRL N A + V P + ++Y+G L +V L+ F
Sbjct: 173 AVEMFHRYDVNGRLLTVNKAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLVELFSE 232
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLADTHKGK 245
HG++ + V YD+DT SRGFGFVT + E A+ ++L GR + V +A+ +
Sbjct: 233 HGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE---R 289
Query: 246 PPQ 248
PP+
Sbjct: 290 PPR 292
>gi|195999482|ref|XP_002109609.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
gi|190587733|gb|EDV27775.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
Length = 154
Score = 93.2 bits (230), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+++TT ETL F +G+I + VI + + K RG+GF+TYK + S ++ L
Sbjct: 2 KIFIGGLSFDTTDETLRNYFAKYGDIADSVVICESGSRKPRGFGFVTYKDVTSVKNCLAG 61
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVP-DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
IDG+ A S A P + +K++IGGL T + +F + G+I
Sbjct: 62 IPHQIDGKTVEVKHAVPRESNELAAPHERRSKKIFIGGLGASTTETEIRQYFNQFGKILN 121
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ D+DTN RGFGFV ++ ++ K +
Sbjct: 122 IDLKKDRDTNVLRGFGFVVFEAEDSVDKVL 151
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T E L N+F ++G+I + V + + + RGFGFVTYK V + K +
Sbjct: 2 KIFIGGLSFDTTDETLRNYFAKYGDIADSVVICESGSRKPRGFGFVTYKDVTSVKNCLAG 61
Query: 225 -PHKTLGGRTIIVKLA 239
PH+ + G+T+ VK A
Sbjct: 62 IPHQ-IDGKTVEVKHA 76
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
G+++P +EE K LFV LA++ S+ L F G +E VIY++ T
Sbjct: 117 GAEFPEPSEEAK-----------LFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETD 165
Query: 112 KSRGYGFITYKHMESTQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYI 168
+SRG+GF+T +E ++A+ ++ ++GRL N A S P + + ++Y+
Sbjct: 166 QSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYV 225
Query: 169 GGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHK 227
G L +V L F HG++ E V YD++T SRGFGFVT A+ +
Sbjct: 226 GNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQ 285
Query: 228 TLGGRTIIVKLAD 240
+ GR I V +A+
Sbjct: 286 NMEGRAIRVNVAE 298
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L+ +V ++ L F + G +E V Y+++T++SRGFGFVT TVE A+ AV
Sbjct: 126 EAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAV 185
Query: 223 DDPHK-TLGGRTIIVKLADTHKGKP---PQTQLPA 253
+ ++ L GR + V A +P P+ PA
Sbjct: 186 EKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 220
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+++V L W+ + L F HG++ E V+YD+ TG+SRG+GF+T + A+ A
Sbjct: 222 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAA 281
Query: 134 -PSKLIDGRLAVCNLACE 150
+ ++GR N+A E
Sbjct: 282 LDGQNMEGRAIRVNVAEE 299
>gi|224061254|ref|XP_002300392.1| predicted protein [Populus trichocarpa]
gi|222847650|gb|EEE85197.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 93.2 bits (230), Expect = 6e-16, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA +TT T F +GEI + ++ D+ TG+ RG+GFITY S +
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYAD-PSVVDKVIE 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ +I+G+ V + G D +K+++GG+ VT + NFF +HG++ E
Sbjct: 79 DTHVINGKQQV-EIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFQNFFSKHGKVVEH 137
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
+ D +TN SRGFGF+ + + E + + +
Sbjct: 138 QIIRDHETNRSRGFGFIIFDSEEVVDEMLSN 168
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGL+ + T FG++GEI + + D+ T + RGFGF+TY K ++D
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 225 PHKTLGGRTIIVK 237
H G + + +K
Sbjct: 80 THVINGKQQVEIK 92
Score = 43.1 bits (100), Expect = 0.67, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S D +K+FV G+ + T + F HG++ E +I D T +SRG+GFI + E
Sbjct: 102 SKDFKTKKIFVGGIPSSVTEDEFQNFFSKHGKVVEHQIIRDHETNRSRGFGFIIFDSEEV 161
Query: 127 TQSAL 131
L
Sbjct: 162 VDEML 166
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 67 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 126
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 127 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 186
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 187 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 233
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 67 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 126
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 127 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 172
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W TT + L F +GE+ + V+ + TG+SRG+GFIT+ + L+
Sbjct: 21 KMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLVLQN 80
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQR-KLYIGGLSPEVTTEVLLNFFGRHGE 189
++D R CN E + K+++GGL +T L NFF ++G+
Sbjct: 81 TPHILDNRTIDPKPCNPRAEMVRAPRRSMGTGNGYKVFLGGLPSNLTETDLRNFFSQYGK 140
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ E + YD++ +SRGFGF+T+++ E+ + + + ++ G+ + +K A+
Sbjct: 141 VSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQVEIKKAE 191
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
Q K++IGGLS E T + LL +F ++GE+ + V + +T SRGFGF+T+ +
Sbjct: 19 QGKMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLVL 78
Query: 223 DDPHKTLGGRTIIVK 237
+ L RTI K
Sbjct: 79 QNTPHILDNRTIDPK 93
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T + L F+ G++ E ++ D+ TG++RG+GF+ + S +
Sbjct: 46 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFAD-PSVAERVVM 104
Query: 134 PSKLIDGRLA------------VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDGR V + G A + +K+++GGL+ VT
Sbjct: 105 EKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFK 164
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
N+F + G I + V YD +T RGFGF+TY + EA +K + L G+ + VK A
Sbjct: 165 NYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRA 222
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA T F G I + V+YD T + RG+GFITY E+ + L
Sbjct: 147 KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLH 206
Query: 133 APSKLIDGRL 142
++G++
Sbjct: 207 KTFHELNGKM 216
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEHDFKEFFAQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 110 IDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEIC-GKPIEVKKA 157
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ F G + + ++ DK TG+ RG+GF+T+ + ++AL
Sbjct: 84 KIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSG 143
Query: 134 PSKLIDGRLAVCNLACE 150
P L +C E
Sbjct: 144 P-------LEICGKPIE 153
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 59 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 118
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 119 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 172
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 173 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 227
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 59 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 118
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 119 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 150
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 92.8 bits (229), Expect = 7e-16, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P KLFV L ++ + L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 118 PEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEK 177
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
A+ ++ I+GRL N A + V P + ++Y+G L +V L F
Sbjct: 178 AVEMFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSE 237
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
HG++ E V YD++T SRGFGFVT T ++ A A+D ++L GR I V +A+
Sbjct: 238 HGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDG--QSLDGRAIRVNVAE 292
Score = 61.2 bits (147), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L +V + L F + G +E V Y+++T++SRGFGFVT TVE A+KAV
Sbjct: 120 EAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAV 179
Query: 223 DDPHK-TLGGRTIIVKLADTHKG---KPPQTQLPA 253
+ ++ + GR + V A +PP+ PA
Sbjct: 180 EMFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPA 214
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+D+ + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHTVKGHNCEVRKA 180
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 92.8 bits (229), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 8/158 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKL+V + T++ L F HG +E V+YDK T +SR +GF+T +E +A+
Sbjct: 67 RKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEEANAAVE 126
Query: 133 APSKL-IDGRLAVCNLACEGLSGVS-AVPDL------AQRKLYIGGLSPEVTTEVLLNFF 184
A + + GR N+ L + + P+ +Q K+Y+G L+ VTTEVL NFF
Sbjct: 127 ALNGTEVGGRKIKVNVTESFLPNIDRSAPESEPVFVDSQYKVYVGNLAKNVTTEVLKNFF 186
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
G+I +V++ T++S+G+GFVT+ + E + AV
Sbjct: 187 SEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAV 224
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 153 SGVSAVPDL-AQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVT 211
S V P++ A RKLY+G + VT + L + F HG +E V YDK TN SR FGFVT
Sbjct: 55 SAVLEAPEVVAARKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVT 114
Query: 212 YKTVEAAKKAVDDPHKT-LGGRTIIVKLADT 241
TVE A AV+ + T +GGR I V + ++
Sbjct: 115 MSTVEEANAAVEALNGTEVGGRKIKVNVTES 145
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 203 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPC 262
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 263 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 317
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 318 FAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 377
Query: 244 GKPPQTQL 251
P QL
Sbjct: 378 SVTPAAQL 385
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 129 SALRAPSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
L+ +DGR CN + S K+++GGL VT L +FF
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSG----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA------ 239
R G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSS 184
Query: 240 ----DTHKGK--PPQTQLP 252
D+H+G+ PPQ P
Sbjct: 185 SKMNDSHQGQWGPPQQGGP 203
>gi|297269736|ref|XP_002799946.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 273
Score = 92.8 bits (229), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+RG+++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A +K ++G + + L
Sbjct: 63 TTVEEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKA 180
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 149 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 208
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 209 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 268
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 269 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 315
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++GEIE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGEIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT E L A F G I + V+ D T +SRG+GFITY H
Sbjct: 20 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 79
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A ++ IDGR+ A S +KL++G L + + L ++F
Sbjct: 80 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQN 139
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 140 FGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLKGKMVDVKKA 192
>gi|348668207|gb|EGZ08031.1| hypothetical protein PHYSODRAFT_526739 [Phytophthora sojae]
Length = 158
Score = 92.8 bits (229), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W TT +TL F +G + + A++ DK TG+ RG+GF+T+ + L
Sbjct: 19 KLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDE 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
L DGR A + P R K+++GGL+P VT + ++F G+I
Sbjct: 79 THTL-DGRSVEVKRA---IPREKTAPGGGSRLKKIFVGGLAPTVTEQDFRHYFEEFGKIT 134
Query: 192 EGSVAYDKDTNESRGFGFVTYK 213
+ V D+DT SRGFGF+T++
Sbjct: 135 DAVVMIDRDTQRSRGFGFITFE 156
Score = 65.9 bits (159), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
KL+IGG+S E T + L FG++G + + ++ DK T + RGFGFVT+ A + +D+
Sbjct: 19 KLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDE 78
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
H TL GR++ VK A + P
Sbjct: 79 TH-TLDGRSVEVKRAIPREKTAP 100
Score = 43.9 bits (102), Expect = 0.38, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+K+FV GLA T + F G+I + V+ D+ T +SRG+GFIT++
Sbjct: 107 KKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFE 156
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 168 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 227
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 228 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 282
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 283 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 342
Query: 244 GKPPQTQL 251
P QL
Sbjct: 343 AVTPAAQL 350
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 168 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 227
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 228 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 282
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 283 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 342
Query: 244 GKPPQTQL 251
P QL
Sbjct: 343 AVTPAAQL 350
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY +
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVE 77
Query: 129 SALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 128
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 129 QYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 183
Query: 242 HKGKPPQTQLPAA 254
K +P + P
Sbjct: 184 KKAQPKEVMTPTG 196
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 129 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 188
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 189 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 243
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 244 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 303
Query: 244 GKPPQTQL 251
P QL
Sbjct: 304 AVTPAAQL 311
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+ Y +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A S +DGR+ A L +K++IGG+ + L ++F ++G+IE
Sbjct: 74 ARSHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFIGGIKEDTEEHHLRDYFEQYGKIEM 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+++ D H K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 9 SLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTF 68
Query: 122 KHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
L SK ID ++A A P L R K+++GGLS
Sbjct: 69 VDQAGVDKVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
T E + +F + G++++ + +DK TN RGFGFVT++ + +K + + I
Sbjct: 120 TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEI 174
Query: 235 IVKLADTHKGKPPQTQLPAA 254
K+ + K +P + PA
Sbjct: 175 NNKMVECKKAQPKEVMSPAG 194
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
D KLFV GL+W TT E L F +GE+ + V+ + +G+SRG+GF+T+ +
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 129 SALRAPSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFG 185
L+ +DGR CN + S K+++GGL VT L +FF
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSG----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 186 RHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA------ 239
R G++ E + YD++ +SRGFGF++++ +A + V + L G+ + +K A
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSS 184
Query: 240 ----DTHKGK--PPQTQLP 252
D+H+G+ PPQ P
Sbjct: 185 SKMNDSHQGQWGPPQQGGP 203
>gi|297599561|ref|NP_001047359.2| Os02g0602600 [Oryza sativa Japonica Group]
gi|255671069|dbj|BAF09273.2| Os02g0602600 [Oryza sativa Japonica Group]
Length = 415
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
Query: 38 PLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHG 97
P ++++L+DLL + P++ + + A +D HR+LFV GL+ T+ + AAF G
Sbjct: 69 PFTRNELLDLLVEACLRNPALRSRLAATAESDAAHRRLFVHGLSPGVTAAAMAAAFAPFG 128
Query: 98 EIEEGAVIYDKATGKSRGYGFITY--KHMESTQSALRAPSKL-IDGRLAVCNLACEGLSG 154
++E + D+ATG+ RGYGF+T+ + A A S+L + GR C LA G
Sbjct: 129 ALDECHAVADRATGRCRGYGFVTFRRRSAARRALAADASSRLAVGGRPVACQLASLG--- 185
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
P RKL++ + + L F R GEIE G + D+ T + RG+ YK
Sbjct: 186 ----PTSPDRKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQFRGYAIFFYKY 241
Query: 215 VEAAKKAVDD 224
E KA+++
Sbjct: 242 PEGLTKALEE 251
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 85 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 144
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 145 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 198
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 199 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 253
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 85 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 144
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 145 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 176
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 187
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 188 KEVMFPPGT 196
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 147 LACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
+ +G S P+ +Q K++IGGLS + + + L ++F + GEI E V D T
Sbjct: 1 MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGFVT+ + K + PH L +TI K+A + +P
Sbjct: 61 SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQP 103
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT+ S
Sbjct: 35 SNDPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSS 94
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
+ L+ P +DG+ A P+ +K+++GG+S + + + + +F +
Sbjct: 95 VDNVLKVPIHTLDGKKIDPKHATP--KNRPKQPN-KTKKIFVGGVSQDTSADEVKAYFSQ 151
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 152 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQ 211
Query: 247 PQTQLPAAVVPVP-LPLGAGYPQAGKAHANTPPV 279
QL + + L + P AG A T P+
Sbjct: 212 ASAQLLGKRLMLSGLGMRMATPTAGAIAAATNPL 245
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 12 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 71
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 72 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 131
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 132 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 178
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 12 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 71
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 72 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 117
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L F GE+ E ++ D+ TG++RG+GFI + + +
Sbjct: 7 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAER-VTM 65
Query: 134 PSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+IDGR+ A S + + + RK+++GGL+ VT +
Sbjct: 66 DKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRY 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 126 FEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRA---- 181
Query: 244 GKPPQTQLPAAVVPVP 259
P+ Q P V P
Sbjct: 182 --VPKEQSPGPVARSP 195
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+ S PV RK+FV GLA N T F G I + V+YD T + RG+GFITY
Sbjct: 95 SSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITY 154
Query: 122 KHMESTQSALRAPSKLIDGRL 142
++ AL ++G++
Sbjct: 155 DSEDAVDKALHKNFHELNGKM 175
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L++
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHVLQS 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAV 255
+AV
Sbjct: 183 NNSAV 187
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|449440111|ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV L + S L F G++E VIYDK TG+SRG+GF+T + ++A +
Sbjct: 94 KLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQ 153
Query: 134 PSKL-IDGRLAVCNLA-------CEGLSGVSAVPDLAQR-KLYIGGLSPEVTTEVLLNFF 184
+ +DGRL N G R ++++ L+ V L N F
Sbjct: 154 FNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLF 213
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHK 243
G + E V YD+D+ +SRGFGFVTY + E +A+ L GR I V A+
Sbjct: 214 REKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEA-- 271
Query: 244 GKPPQTQL 251
+PP+ Q
Sbjct: 272 -RPPRRQF 278
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 59 AEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGF 118
A+++K+ S D K+F+ GL W TT + L F +G + E ++ D TG+SRG+GF
Sbjct: 151 AKQVKADLSRDI--NKMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGF 208
Query: 119 ITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEV 175
+++ S ++ ++DG++ + A+P Q K +++GG+ P+V
Sbjct: 209 LSFADASSVDEVVKT-QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGPDV 258
Query: 176 TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTII 235
+ FF + G I + + DKDT SRGFGF+TY + +A + + G+ I
Sbjct: 259 RPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIE 318
Query: 236 VKLADTHKGKPPQTQLPAAVVPVPLPL 262
+K A+ + Q Q P P
Sbjct: 319 IKRAEPRQ---VQKQRTTNASPTGQPF 342
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
+ +DP KLFV GL+W T+S+ L F + G + + ++ D T +SRG+GFIT++
Sbjct: 140 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 199
Query: 126 STQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNF 183
+ + L+ P +DG+ A P A +K+++GG+S + + E + +
Sbjct: 200 TVEKVLKVPIHTLDGKKIDPKHATP-----KNRPRQANKTKKIFVGGVSQDTSAEEVKAY 254
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G +EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 255 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 314
Query: 244 GKPPQTQL 251
P QL
Sbjct: 315 AVTPAAQL 322
>gi|171451954|dbj|BAG15905.1| DAZAP [Dugesia japonica]
Length = 354
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL +TT+E+L + F G++ E +V+ D TG+SRG+G++ Y E+ Q +
Sbjct: 12 KLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVMST 71
Query: 134 PSKL----IDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
L ID + CN+ +G S Q K+++GG++PE E L +FF + G
Sbjct: 72 KHHLEGKEIDPK--PCNVNMKGRS-------RRQLKIFVGGIAPEHNEETLRDFFKQFGN 122
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVK 237
I E ++ D+ + RGF FV + K+ ++D T+G + + +K
Sbjct: 123 ITELTLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIK 170
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 92.4 bits (228), Expect = 9e-16, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P KLFV L ++ SE L F G +E VIY++ T +SRG+GF+T +E
Sbjct: 49 SEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEE 108
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR-------KLYIGGLSPEVTTE 178
+ A+ + +DGR N A S P+ A R ++Y+G L +V T
Sbjct: 109 AEKAVELLNGYDMDGRQLTVNKAAPRGS-----PERAPRGDFEPSCRVYVGNLPWDVDTS 163
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTII 235
L F HG++ V D++T SRGFGFVT + V A A+D +TL GR +
Sbjct: 164 RLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDG--QTLDGRAVR 221
Query: 236 VKLAD 240
V +A+
Sbjct: 222 VNVAE 226
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
EG G S P+ A KL++G L +V +E L F G +E V Y+++T+ SRGFGF
Sbjct: 43 EGGQGFSEPPEEA--KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGF 100
Query: 210 VTYKTVEAAKKAVD 223
VT TVE A+KAV+
Sbjct: 101 VTMSTVEEAEKAVE 114
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY +
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVE 77
Query: 129 SALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 128
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
++F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 129 HYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 183
Query: 242 HKGKPPQTQLPAA 254
K +P + P
Sbjct: 184 KKAQPKEVMTPTG 196
>gi|410903808|ref|XP_003965385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
3 [Takifugu rubripes]
Length = 264
Score = 92.4 bits (228), Expect = 9e-16, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+TT + L F +GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEKVASQ 116
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + G V +K+++GGLSP+ E + +FG GE+E
Sbjct: 117 KEHKLNGKVIDPKKA-KAMKGKEPV-----KKIFVGGLSPDTPEEKVREYFGAFGEVESI 170
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + TN+ RGF F+T+K E K ++ +G +K+A
Sbjct: 171 ELPMETKTNKRRGFCFITFKEEEPVKCIMEKKFHNIGLSKCEIKVA 216
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + T + L ++F ++GE+ + ++ D T SRGFGFV +K E+ +K
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEKVASQ 116
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A KGK P
Sbjct: 117 KEHKLNGKVIDPKKAKAMKGKEP 139
Score = 41.6 bits (96), Expect = 1.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 60 EEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFI 119
++ K++ +PV +K+FV GL+ +T E + F GE+E + + T K RG+ FI
Sbjct: 129 KKAKAMKGKEPV-KKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMETKTNKRRGFCFI 187
Query: 120 TYKHMESTQ 128
T+K E +
Sbjct: 188 TFKEEEPVK 196
>gi|109109574|ref|XP_001086021.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Macaca mulatta]
Length = 267
Score = 92.4 bits (228), Expect = 9e-16, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+RG+++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A +K ++G + + L
Sbjct: 63 TTVEEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKA 180
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT+ S
Sbjct: 50 SNDPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSS 109
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
+ L+ P +DG+ A P+ +K+++GG+S + + + + +F +
Sbjct: 110 VDNVLKVPIHTLDGKKIDPKHATP--KNRPKQPN-KTKKIFVGGVSQDTSADEVKAYFSQ 166
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++EE + D+ T RGFGFVT++ + + + T+ + + K A +
Sbjct: 167 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQ 226
Query: 247 PQTQLPAAVVPVP-LPLGAGYPQAGKAHANTPPV 279
QL + + L + P AG A T P+
Sbjct: 227 ASAQLLGKRLMLSGLGMRMATPTAGAIAAATNPL 260
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 92.4 bits (228), Expect = 9e-16, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ +G+SRG+GF+T +E
Sbjct: 105 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 164
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ ++ I GRL N A + S V P + + Y+G L + L+ F
Sbjct: 165 AIEMFNRYDISGRLLNVNRAAQRGSRVERPPRQFASAFRAYVGNLPWQAEDSRLVQLFSE 224
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
HGE+ +V YD++T SRGFGFVT A+K+ +DD L G+ +
Sbjct: 225 HGEVLNATVVYDRETGRSRGFGFVTM----ASKEELDDAISALDGQEL 268
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 159 PDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAA 218
P + K+Y+G L +V +E L F + G +E V Y++++ +SRGFGFVT T+E A
Sbjct: 103 PPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 162
Query: 219 KKAVD 223
KA++
Sbjct: 163 DKAIE 167
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+ +V L W L F HGE+ V+YD+ TG+SRG+GF+T E A+ A
Sbjct: 203 RAYVGNLPWQAEDSRLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELDDAISA 262
Query: 134 -PSKLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 263 LDGQELDGRPLRVNVAAE 280
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W+T + L F +G++ E ++ D+ TG+ RG+GFI + +R
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 134 PSKLIDGRLAVCNLA-----------CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
IDGR+ A G VS P RK+++GGL+ VT N
Sbjct: 67 KHN-IDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRT-RKIFVGGLASTVTESEFKN 124
Query: 183 FFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTH 242
+F + G I + V YD +T RGFGF+TY + EA +K + L G+ + VK A
Sbjct: 125 YFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRA--- 181
Query: 243 KGKPPQTQLPAAVVPVP--LPLGAGYPQAGKAHANTPPVGYS 282
+P + P P PLG GY G++ N+ GY+
Sbjct: 182 --------VPKELSPGPSRSPLG-GY-NYGQSRVNSFLNGYT 213
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
RK+FV GLA T F G I + V+YD T + RG+GFITY E+ + L
Sbjct: 106 RKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVL 164
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 69
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 70 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 123
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 124 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 169
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 69
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 70 KEHKLNGKVIDPKRAKAMKTKEP 92
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 85 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 143
Query: 123 HMESTQSAL 131
E + +
Sbjct: 144 EEEPVKKIM 152
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 34/299 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 188
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP-----QNVPP 289
PP T+ LP + L +G GYP G+ + P GY +P P
Sbjct: 189 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPV 248
Query: 290 YPTSSYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPIGHP-ATAPKRRIASILGRVSSN 347
+ + + Y QP P P +P P G P A +P A + G S +
Sbjct: 249 AAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSPGPVAADLYGPASQD 307
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|391347114|ref|XP_003747810.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Metaseiulus occidentalis]
Length = 290
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ GL+W TTS+TL F GEI E +V+YD +SRG+GF+T+ H+ S L++
Sbjct: 73 KLFIGGLSWRTTSQTLRNYFMPFGEIVECSVLYDDQQ-RSRGFGFVTFAHVGSVVKVLKS 131
Query: 134 PSKLIDGRLAVCNLACEGL-SGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRH-GE 189
ID R+ + G S ++ P L + K+++GGL V + FF RH G
Sbjct: 132 APHTIDNRVVDAKPSKGGTESRITPKPKLPNQYLKVFVGGLPYYVNNYDIKCFFDRHYGG 191
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
+ + +V Y + T SRGF FV ++ + ++ ++D
Sbjct: 192 VLDAAVMYCQATQTSRGFAFVQFENQSSMERVLED 226
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F + EIE V TG+SRG+ FI +K ES +
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A I+ + A K+++GGLS E++ + + NFF G I E
Sbjct: 103 AGEHTINNKKVDPKKAK-----------ARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 151
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + P +T+GG+ + VK A
Sbjct: 152 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 198
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E T + L + FG + EIE +V +T SRGF F+ +K E+ K +
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
T+ + + K A GK
Sbjct: 103 AGEHTINNKKVDPKKAKARHGK 124
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQL 251
L G+ I K A K K P ++
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEPVKKI 165
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HME 125
E
Sbjct: 213 EEE 215
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T++ ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEANEHDFKEFFAQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + A+ P + G+ I VK A
Sbjct: 110 IDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEIC-GKPIEVKKA 157
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ F G + + ++ DK TG+ RG+GF+T+ + ++AL
Sbjct: 84 KIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSG 143
Query: 134 PSKLIDGRLAVCNLACE 150
P L +C E
Sbjct: 144 P-------LEICGKPIE 153
>gi|302780479|ref|XP_002972014.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
gi|302781554|ref|XP_002972551.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160018|gb|EFJ26637.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160313|gb|EFJ26931.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
Length = 167
Score = 92.4 bits (228), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++W TT E L F+ +G++ E ++ D+ TG+ RG+GF+ + + ++
Sbjct: 7 KIFVGGVSWETTDEKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVADRVVQD 66
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVP--DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
I+G+L + AVP + K+++GGL+P V+ E +F + G I
Sbjct: 67 KHS-INGKL---------VEAKKAVPRDEHQNAKIFVGGLAPNVSEEEFKQYFEQFGNIT 116
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ V YD T RGFGF+T+ + EA + L + + VK A
Sbjct: 117 DIVVMYDHATQRPRGFGFITFDSEEAVDSVLQKTFHELKDKMVEVKRA 164
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D Q K+++GG+S E T E L +F +G++ E + D+ T RGFGFV + + A
Sbjct: 2 DSDQGKIFVGGVSWETTDEKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVAD 61
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKP 246
+ V D H G KL + K P
Sbjct: 62 RVVQDKHSING------KLVEAKKAVP 82
Score = 52.8 bits (125), Expect = 0.001, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 58 IAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYG 117
+ E K+V + + K+FV GLA N + E F G I + V+YD AT + RG+G
Sbjct: 74 LVEAKKAVPRDEHQNAKIFVGGLAPNVSEEEFKQYFEQFGNITDIVVMYDHATQRPRGFG 133
Query: 118 FITYKHMESTQSALR 132
FIT+ E+ S L+
Sbjct: 134 FITFDSEEAVDSVLQ 148
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 110 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 169
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 170 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 223
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 224 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 278
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 110 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 169
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 170 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 201
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT+ S
Sbjct: 34 GGDPAPGKLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGS 93
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
L+ P +DG+ A A +K+++GG+S + +++ + +F +
Sbjct: 94 VDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN---RTKKIFVGGVSQDTSSDEVKAYFNQ 150
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++EE + D+ T RGFGFVT++ + + + + TI K + K +P
Sbjct: 151 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE-----IHFHTIKNKKVECKKAQP 205
Query: 247 PQTQLPAAVV 256
+ P A+
Sbjct: 206 KEAVQPGALA 215
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 33/298 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 192
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP-----QNVPP 289
PP T+ LP + L +G GYP G+ + P GY +P P
Sbjct: 193 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPV 252
Query: 290 YPTSSYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPIGHPATAPKRRIASILGRVSSN 347
+ + + Y QP P P +P P G P +A + G S +
Sbjct: 253 AAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSPGPVADLYGPASQD 310
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 149 CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFG 208
+G SG + K++IGGLS + + + L ++F + GEI E V D T SRGFG
Sbjct: 6 SQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 209 FVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
FVT+ + K + PH L +TI K+A + +P
Sbjct: 66 FVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + E+ +
Sbjct: 48 RKLFVGGLSWETTDKELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 107
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGLS E++ + + +FF + G I E
Sbjct: 108 AGDHVINNKKVDPKKAK-----------ARHGKIFVGGLSTELSDDDIKHFFSQFGNIVE 156
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 157 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKKA 203
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 153 SGVSAVPDLAQ-----RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
G AV + +Q RKL++GGLS E T + L + F +G+IE +V D +T SRGF
Sbjct: 32 DGGDAVENGSQDSQEDRKLFVGGLSWETTDKELRDHFNTYGDIESINVKTDPNTGRSRGF 91
Query: 208 GFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
F+ + EA K + + + + K A GK
Sbjct: 92 AFIVFAKAEALDKIMSAGDHVINNKKVDPKKAKARHGK 129
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 127 HGKIFVGGLSTELSDDDIKHFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL 186
Query: 132 RAPSKLIDGRLAVCNLACEGLSGVS 156
+ P + I+G+ A L G+S
Sbjct: 187 KTPKQTINGKAVDVKKATPKLDGMS 211
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L ++ S+ L F G +E VIY++ T SRG+GF++ +E + A+
Sbjct: 142 KIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEM 201
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQ--RKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+ +DGRL N A S P + + ++Y+G L +V L F HG++
Sbjct: 202 FHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGKV 261
Query: 191 EEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ V YD+DT SRGFGFVT T + A A+D ++L GR I V +A+
Sbjct: 262 VDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALD--GRSLDGRAIRVNVAE 312
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++G L +V ++ L F + G +E V Y+++T+ SRGFGFV+ TVE A+KAV+
Sbjct: 142 KIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEM 201
Query: 225 PHK-TLGGRTIIVKLADTHKGKP 246
H+ L GR + V A +P
Sbjct: 202 FHRHDLDGRLLTVNKAAPRGSRP 224
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W T + L F GE+ E ++ D+ TG++RG+GFI + + +
Sbjct: 30 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAER-VTM 88
Query: 134 PSKLIDGRLAVCNLAC----------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+IDGR+ A S + + + RK+++GGL+ VT +
Sbjct: 89 DKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRY 148
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + +A KA+ L G+ + VK A
Sbjct: 149 FEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRA---- 204
Query: 244 GKPPQTQLPAAVVPVP 259
P+ Q P V P
Sbjct: 205 --VPKEQSPGPVARSP 218
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 147 LACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG 206
+ C G G + KL++GG+S E + L ++FGR GE+ E + D++T +RG
Sbjct: 12 VDCRGRRGGEDAMEADSGKLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARG 71
Query: 207 FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPL 262
FGF+ + A++ D H + GR + K A + ++ + + P P+
Sbjct: 72 FGFIVFAEAGVAERVTMDKH-MIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPV 126
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S+ S PV RK+FV GLA N T F G I + V+YD T + RG+GFITY
Sbjct: 118 SSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITY 177
Query: 122 KHMESTQSALRAPSKLIDGRL 142
++ AL ++G++
Sbjct: 178 DSEDAVDKALHKNFHELNGKM 198
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 TEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F +G++ + V+ + +G+SRG+GF+T+ + L+
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQN 79
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++DGR + C + + K+++GGL VT L FF R+G++ E
Sbjct: 80 GPHVLDGR-TIDPKPCNPRTLSKPKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVMEV 138
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ YD++ +SRGFGF++++ +A ++ V D L G+ + +K A+
Sbjct: 139 VIMYDQEKKKSRGFGFLSFEDEDAVERCVADHFVNLHGKQVEIKKAE 185
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+G++E+ + +DK TN RGFGFVT++ + +K +
Sbjct: 133 YGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 147 LACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
+ +G S P+ +Q K++IGGLS + + + L ++F + GEI E V D T
Sbjct: 1 MEADGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKR 60
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGFVT+ + K + PH L +TI K+A + +P
Sbjct: 61 SRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQP 103
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+K+FV GL+ NT E + F +G++E+ +++DK T + RG+GF+T++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFE 159
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G++ + V+ D T +SRG+GF+TY +E +A+
Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 86
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F +G+IE
Sbjct: 87 ARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIET 146
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + RGF FVT+ + K V + T+ G VK A
Sbjct: 147 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 193
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
+++ E + A +K+FV G+ +T L F+ +G+IE V+ D+ +GK RG+
Sbjct: 102 AVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGF 161
Query: 117 GFITYKHMESTQSALRAPSKLIDG 140
F+T+ ++ + I+G
Sbjct: 162 AFVTFDDHDTVDKIVVQKYHTING 185
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 92.4 bits (228), Expect = 1e-15, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P KLFV L ++ SE L F G +E VIY++ T +SRG+GF+T +E
Sbjct: 42 SEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEE 101
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR-------KLYIGGLSPEVTTE 178
+ A+ + +DGR N A S P+ A R ++Y+G L +V T
Sbjct: 102 AEKAVELLNGYDMDGRQLTVNKAAPRGS-----PERAPRGDFEPSCRVYVGNLPWDVDTS 156
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTII 235
L F HG++ V D++T SRGFGFVT + V A A+D +TL GR +
Sbjct: 157 RLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDG--QTLDGRAVR 214
Query: 236 VKLAD 240
V +A+
Sbjct: 215 VNVAE 219
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 150 EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGF 209
EG G S P+ A KL++G L +V +E L F G +E V Y+++T+ SRGFGF
Sbjct: 36 EGGQGFSEPPEEA--KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGF 93
Query: 210 VTYKTVEAAKKAVD 223
VT TVE A+KAV+
Sbjct: 94 VTMSTVEEAEKAVE 107
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 27 RKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 86
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 87 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 146
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 147 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 193
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L N F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 27 RKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 86
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 87 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 132
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 15/192 (7%)
Query: 52 GSQYPSIAEEIKSVASADPVHR-KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKAT 110
GS P K+ A D K+F+ GL W TT ++L F GE+ E V+ D T
Sbjct: 90 GSSTPPYGTVHKASAKDDGTMLLKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTT 149
Query: 111 GKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLY 167
G+SRG+GF+T+K + T + + +DG++ + A+P Q K++
Sbjct: 150 GRSRGFGFLTFKDAK-TVNIVMVKEHFLDGKI---------IDPKRAIPRDEQEKTSKIF 199
Query: 168 IGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK 227
+GG+S E T + ++F + G + + ++ DKDT RGFGFVT+++ + ++ P +
Sbjct: 200 VGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVPLE 259
Query: 228 TLGGRTIIVKLA 239
+ G+ + VK A
Sbjct: 260 -IHGKPVEVKRA 270
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 92.4 bits (228), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ F ++G+IE + D+ + + RGF FVT+ ++ K + + T+ G V+ A
Sbjct: 123 DHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKA 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 183
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 184 KEVMFPPGT 192
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+G++E+ + +DK TN RGFGFVT++ + +K +
Sbjct: 133 YGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 147 LACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
+ +G S P+ +Q K++IGGLS + + + L ++F + GEI E V D T
Sbjct: 1 MEADGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKR 60
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGFVT+ + K + PH L +TI K+A + +P
Sbjct: 61 SRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQP 103
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
+K+FV GL+ NT E + F +G++E+ +++DK T + RG+GF+T++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFE 159
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 78 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 128
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 129 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 183
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 184 KEVMFPPGT 192
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 166 IHFHEINNKMVECKKA 181
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 7/175 (4%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 14 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 73
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 74 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 127
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + DK TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 128 GGFGEVESIELPMDK-TNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 181
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 14 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 73
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 74 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 105
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 68 ADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+P H RKLF+ GL + TT + L A F G+I + V+ D T +SRG+GFITY H
Sbjct: 20 TEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTM 79
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A +A IDGR+ A S +KL++G L + + L ++F
Sbjct: 80 IDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQH 139
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G I + ++ DK+T + RGF FV + + K V L G+ + VK A
Sbjct: 140 FGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKA 192
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA TT F +GEI + ++ D+ TG+ RG+GFITY +
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEE 102
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
P + ++ + G G D +K+++GG+ VT + +FF R+GE+++
Sbjct: 103 PHVINGKQVEIKRTIPRGAVGSK---DFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDH 159
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
+ D TN SRGFGF+T+++ E AVDD
Sbjct: 160 QIMRDHSTNRSRGFGFITFESEE----AVDD 186
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 152 LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVT 211
L+G A P K++IGGL+ E T + FG++GEI + + D+ T + RGFGF+T
Sbjct: 34 LTGDGASPG----KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFIT 89
Query: 212 YKTVEAAKKAVDDPHKTLGGRTIIVK 237
Y K +++PH + G+ + +K
Sbjct: 90 YADPSVVDKVIEEPH-VINGKQVEIK 114
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
+V S D +K+FV G+ N T + F +GE+++ ++ D +T +SRG+GFIT++
Sbjct: 121 AVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFES 180
Query: 124 MESTQSALRAPSKL 137
E+ L +K+
Sbjct: 181 EEAVDDLLSMGNKI 194
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 6 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 65
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 66 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 125
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 126 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 172
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 6 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 65
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 66 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 111
>gi|297850158|ref|XP_002892960.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
gi|297338802|gb|EFH69219.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV G++W TT ET F GE+ + ++ D+ TG RG+GF+T+ + L
Sbjct: 60 KLFVGGVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 119
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ D ++ + G RK+++GGL P + + L N+F +G+I E
Sbjct: 120 EHVIDDRKVDLKRTVPRGDRDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEH 179
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
+ YD T SRGFGFVT++T ++ + D
Sbjct: 180 QIMYDHHTGRSRGFGFVTFQTEDSVDRLFSD 210
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
KL++GG+S E T E N+FG+ GE+ + + D+ T RGFGFVT+ A+K +++
Sbjct: 60 KLFVGGVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 119
Query: 225 PH 226
H
Sbjct: 120 EH 121
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+IK+V+ RK+FV GL + L F V+G+I E ++YD TG+SRG+GF+T
Sbjct: 142 DIKAVSKT----RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVT 197
Query: 121 YKHMES 126
++ +S
Sbjct: 198 FQTEDS 203
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL W TT ++L F GE+ E V+ D A+G+SRG+GF+T+K T + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDAR-TVNIVMVK 59
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVP-DLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P D +R K+++GG+S E T + +F + G +
Sbjct: 60 EHYLDGKI---------IDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKEYFMQFGRVV 110
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A +D P + L G+ I VK A
Sbjct: 111 DATLMMDKDTGRPRGFGFVTFDSEAAVDACLDSPLEIL-GKPIEVKKA 157
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T + F G + + ++ DK TG+ RG+GF+T+ + + L +
Sbjct: 84 KIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACLDS 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+ F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A +
Sbjct: 123 DHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALS 182
Query: 242 HKGKPPQTQLP 252
+ + P
Sbjct: 183 KQEMASTSSTP 193
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGMKEDTEEH 119
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA +TT ET F +GEI + ++ D+ TG+ RG+GFITY ++
Sbjct: 19 KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ +++G+ G S D +K+++GG+ V+ + L NFF ++G++ E
Sbjct: 79 -NHVVNGKQVEIKRTIP--KGSSQANDFKTKKIFVGGIPTSVSEDELKNFFSKYGKVVEH 135
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLADTHKGKPPQTQLP 252
+ D T SRGFGF+ + + + + D + +GG + +K A+ P ++ P
Sbjct: 136 EIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKAE-----PKKSSNP 190
Query: 253 AAVVP 257
A++ P
Sbjct: 191 ASLPP 195
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY +
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVE 77
Query: 129 SALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 128
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 129 QYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 183
Query: 242 HKGKPPQTQLPAA 254
K +P + P
Sbjct: 184 KKAQPKEVMTPTG 196
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGLS E++ + + +FF + G I E
Sbjct: 114 AGDHIINNKKVDPKKAK-----------ARHGKVFVGGLSTELSDDDIKHFFSQFGTIVE 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 163 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKA 209
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + + + K A GK
Sbjct: 111 IMAAGDHIINNKKVDPKKAKARHGK 135
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 133 HGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL 192
Query: 132 RAPSKLIDGR 141
+ P + I+G+
Sbjct: 193 KTPKQTINGK 202
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 121 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 174
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 175 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 220
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 121 KEHKLNGKVIDPKRAKAMKTKEP 143
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 136 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 194
Query: 123 HME 125
E
Sbjct: 195 EEE 197
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 14/173 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL W+TT + L F G +E ++ D A G+SRG+ F+T++ + +
Sbjct: 1 MFVGGLNWDTTDDGLRNYFSQFGRVEACTIMRDPA-GRSRGFAFLTFEDPAAVNKVM-VQ 58
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P + K+++GGL+P VT E L +FG+ G++
Sbjct: 59 EHYLDGKI---------IDPKRAIPRTEHQRTVKMFVGGLAPSVTNEGLKEYFGQFGKVI 109
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKG 244
+ +V D+D++ S+GFGFVT+ A++ P + G+TI VK+A G
Sbjct: 110 DATVMVDRDSSRSKGFGFVTFDDQSGAERLFGMPGLAIDGKTIEVKMAQPRAG 162
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GLA + T+E L F G++ + V+ D+ + +S+G+GF+T+ +
Sbjct: 83 KMFVGGLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDDQSGAERLFGM 142
Query: 134 PSKLIDGRLAVCNLA 148
P IDG+ +A
Sbjct: 143 PGLAIDGKTIEVKMA 157
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT E+L F GE+ E V+ D A+G+SRG+GF+T+K + +
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S E T + +F + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQERTS-----------KIFVGGVSQEATEQDFKQYFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + ++ P + L G+ I VK A
Sbjct: 110 VDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEIL-GKPIEVKKA 157
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ T + F G + + ++ DK TG+ RG+GF+T+ + ++ L
Sbjct: 84 KIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEG 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M +A+
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L ++F +G+I+
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 43.9 bits (102), Expect = 0.37, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E A +KLFV G+ +T L F +G+I+ +I D+ +GK RG+
Sbjct: 84 AVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGF 143
Query: 117 GFITY 121
GF+T+
Sbjct: 144 GFVTF 148
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 23/279 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL W+TT ETL F +GE+ + ++ DK T +SRG+GF+ +K ++ L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 134 PSKLIDGRLAVCNLAC-------------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+DGR + C EG G A + + +K+++GG+ L
Sbjct: 72 KPHNLDGR-NIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPHNCGEPEL 129
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
++F R G + E + YD + RGFGF+T++ ++ +AV+ + G+ + VK A+
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Query: 241 THKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNV----PPYPTSSYT 296
K P P P + A A A G PQ V P + Y
Sbjct: 190 PRDSKAPGQLGPGQWAPRAILSAANGWTAQPAQGWQQAYG---PQGVWVSATGQPIAGYG 246
Query: 297 SPNTAPVPYPTQPPISYPPIPLKKDPIGPIGHPATAPKR 335
P +A PTQPP + L P G P P++
Sbjct: 247 PPLSAGRGTPTQPPSPFNAF-LVTTPAGSFAAPQGYPQQ 284
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+TY +
Sbjct: 20 DPC--KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVE 77
Query: 129 SALRA-----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 78 KVLAQNRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 128
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
++F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 129 HYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 183
Query: 242 HKGKPPQTQLPAA 254
K +P + P
Sbjct: 184 KKAQPKEVMTPTG 196
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ T E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 NEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKTAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + A K+++GGLS E++ + + +FF + G I E
Sbjct: 114 AGDHIINNKKVDPKKAK-----------ARHGKVFVGGLSTELSDDDIKHFFSQFGTIVE 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + P +T+ G+ + VK A
Sbjct: 163 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKA 209
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + FG +G+IE +V D +T SRGF F+ + E+ K
Sbjct: 51 LNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
+ + + + K A GK
Sbjct: 111 IMAAGDHIINNKKVDPKKAKARHGK 135
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 72 HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL 131
H K+FV GL+ + + + F G I E + +DK + +G+ FIT++ + L
Sbjct: 133 HGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL 192
Query: 132 RAPSKLIDGR 141
+ P + I+G+
Sbjct: 193 KTPKQTINGK 202
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL TT L + GEI + V+ D T +SRG+GFITYK E +A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
IDG+ A S + KL++GGL +VT E L +F ++G I E
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITE 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVK 237
V K++ ESRGFGFVT+ + KA+ PH R + K
Sbjct: 137 CEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKK 182
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA-V 222
RKL+IGGL+P T L +F+ + GEI + V D TN SRGFGF+TYK E A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 223 DDPHKTLGGRTIIVKLA 239
+ PH+ + G+T+ K A
Sbjct: 77 NRPHE-IDGKTVEAKRA 92
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M SA+
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDSAMA 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L ++F +G+I+
Sbjct: 77 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFSEYGKIDT 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 137 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 183
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E A +KLFV G+ +T L F +G+I+ +I D+ +GK RG+
Sbjct: 92 AVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFSEYGKIDTIEIITDRQSGKKRGF 151
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 152 GFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 183
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT + L F +G + E ++ D TG+SRG+GF+++ S ++
Sbjct: 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVKT 190
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSPEVTTEVLLNFFGRHGEI 190
++DG++ + A+P Q K +++GGL +V + +F + G I
Sbjct: 191 -QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGLGTDVRPKEFEEYFSQWGTI 240
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
+ + DKDT SRGFGFVTY + +AA+K + ++ G+ I +K A+
Sbjct: 241 IDAQLMLDKDTGRSRGFGFVTYDSPDAAEKVCESRYREFKGKQIEIKRAE 290
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HME 125
E
Sbjct: 213 EEE 215
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+ V LG G HA
Sbjct: 183 NNSTVGGAYGKLGNECSHWGPHHA 206
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HME 125
E
Sbjct: 213 EEE 215
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 52 GSQYPS-IAEEIKSVASADPVHR-KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKA 109
G +PS + E ++ +P KLFV L ++ SE L F+ G +E VIY++
Sbjct: 74 GGDFPSFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRE 133
Query: 110 TGKSRGYGFITYKHMESTQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQ--RKL 166
T +SRG+GF+T +E A+ S+ ++GRL N A S P Q ++
Sbjct: 134 TDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRI 193
Query: 167 YIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-P 225
Y+G + ++ L F HG++ V +D+++ SRGFGFVT + +A+ +
Sbjct: 194 YVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLD 253
Query: 226 HKTLGGRTIIVKLAD 240
+TL GRTI V A+
Sbjct: 254 GQTLDGRTIRVNAAE 268
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD- 223
KL++G L ++ +E L F + G +E V Y+++T+ SRGFGFVT TVE A KAV+
Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157
Query: 224 DPHKTLGGRTIIVKLADTHKGKP---PQTQLPA 253
L GR + V A +P P+T P
Sbjct: 158 YSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPT 190
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M +A+
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L ++F +G+I+
Sbjct: 67 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 126
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 127 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 173
Score = 43.9 bits (102), Expect = 0.38, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E A +KLFV G+ +T L F +G+I+ +I D+ +GK RG+
Sbjct: 82 AVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGF 141
Query: 117 GFITY 121
GF+T+
Sbjct: 142 GFVTF 146
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S P KLFV L ++ SE L F G +E VIY++ T +SRG+GFIT +E
Sbjct: 127 SEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEE 186
Query: 127 TQSALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNF 183
+ A+ ++ ++GR N A S P + ++Y+G L +V L
Sbjct: 187 AEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQV 246
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLAD 240
F HG++ + V YD+DT SRGFGFVT + + A A+D ++L GR I V +A+
Sbjct: 247 FSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALD--GQSLDGRAIRVNVAE 304
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ KL++G L ++ +E L F G +E V Y+++T++SRGFGF+T TVE A+KAV
Sbjct: 132 EAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAV 191
Query: 223 DDPHK-TLGGRTIIVKLA---DTHKGKPPQTQLPA 253
+ ++ L GR + V A + +PPQ P+
Sbjct: 192 EMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPS 226
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+ V LG G HA
Sbjct: 183 NNSTVGGAYGKLGNECSHWGPHHA 206
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA TT F +GEI + ++ D+ TG+ RG+GFITY + +
Sbjct: 45 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 104
Query: 134 PSKLIDGR-LAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+ +I+G+ + + G +G S D +K+++GG+ VT + +FF R+GE+++
Sbjct: 105 -THIINGKQVEIKRTIPRGAAG-SNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKD 162
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLADTHKGKPP 247
+ D TN SRGFGF+TY + EA + +K G + +K A+ K PP
Sbjct: 163 HQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPP 218
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV G+ T + F +GE+++ ++ D +T +SRG+GFITY E+ L
Sbjct: 134 KKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLS 193
Query: 133 APSKL 137
+K+
Sbjct: 194 VGNKI 198
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+ V LG G HA
Sbjct: 183 NNSTVGGAYGKLGNECSHWGPHHA 206
>gi|189441636|gb|AAI67421.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K S L
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGRL A A+ +K+++GGL+PE + + +F GEIE
Sbjct: 113 KEHRLDGRLIDPKKAM-------AMKKDPIKKIFVGGLNPEAGEDKIREYFETFGEIEAI 165
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+ D TN+ RGF F+T+K E KK ++
Sbjct: 166 ELPMDPKTNKRRGFVFITFKEEEPVKKILE 195
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K + K ++
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 225 PHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVP 257
L GR I K A K P + + P
Sbjct: 113 KEHRLDGRLIDPKKAMAMKKDPIKKIFVGGLNP 145
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 44/270 (16%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W T+ + L F GE+ E ++ D+ATG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 134 PSKLIDGRLA------------VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDG++ V N + L G + +K+++GGL+ VT
Sbjct: 67 -KHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSN--SKKIFVGGLASSVTEAEFK 123
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G I + V YD T RGFGF++Y + EA K + L G+ + VKLA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLA-- 181
Query: 242 HKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGY---SYPQNVPPYPTSSYTSP 298
VP + L Q T + Y Q P P S Y
Sbjct: 182 --------------VPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYG-- 225
Query: 299 NTAPVPYPTQPPISYPPIPLKKDPIGPIGH 328
+P + Y P + P GH
Sbjct: 226 --------VKPEVRYSPAVGNRGGFSPFGH 247
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA + T F G I + V+YD T + RG+GFI+Y E+ L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 133 APSKLIDGRLAVCNLAC 149
++G++ LA
Sbjct: 166 KTFHELNGKMVEVKLAV 182
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 8/158 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKL+V + T++ L A F HG +E V++DK TG+SR +GF+T E +A+
Sbjct: 70 RKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIE 129
Query: 133 APSKL-IDGRLAVCNLACEGLSGVS-AVPDL------AQRKLYIGGLSPEVTTEVLLNFF 184
+ ++ + GR N+ L + + P+ +Q K+Y+G L+ VTTE+L NFF
Sbjct: 130 SLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTTEMLKNFF 189
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
GE+ +V+ T +S+G+GFVT+ + E + AV
Sbjct: 190 SEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAV 227
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 155 VSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT 214
+ A ++A RKLY+G + VT + L F HG +E V +DK T SR FGFVT T
Sbjct: 61 LEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMST 120
Query: 215 VEAAKKAVDDPHKT-LGGRTIIVKLADT 241
E A A++ ++T +GGR I V + ++
Sbjct: 121 PEEANAAIESLNETEVGGRKIKVNVTES 148
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HME 125
E
Sbjct: 213 EEE 215
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 80 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 139
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 140 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 193
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 194 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 239
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 80 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 139
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 140 KEHKLNGKVIDPKRAKAMKTKEP 162
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 155 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 213
Query: 123 HME 125
E
Sbjct: 214 EEE 216
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A V L +K+++GG+ + L ++F ++G+IE
Sbjct: 95 ARPHKVDGRVVEPKKAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
V D+ + + GF FVT+ + K V + T+ G VK A
Sbjct: 155 IEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 201
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY+K +G+SRG+GF+T +E
Sbjct: 102 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADK 161
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ ++ I GRL N A + S V P + + Y+G L + L+ F
Sbjct: 162 AIETFNRYNISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSE 221
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVE---AAKKAVDDPHKTLGGRTIIVKLA 239
HGE+ ++ YD++T SRGFGFVT + E +A A+D + + GR + V +A
Sbjct: 222 HGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG--QEMDGRPLRVNVA 275
Score = 60.5 bits (145), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 148 ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
A G +G +A P + K+Y+G L +V +E L F + G +E V Y+K++ +SRGF
Sbjct: 90 ASGGDAGYTAEPP-EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGF 148
Query: 208 GFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLADTHKG----KPPQ 248
GFVT T+E A KA++ ++ + GR + V A +G +PP+
Sbjct: 149 GFVTMSTIEEADKAIETFNRYNISGRLLNVNRA-AQRGSRVERPPR 193
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+ +V L W L F HGE+ ++YD+ TG+SRG+GF+T E SA+ A
Sbjct: 200 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 259
Query: 134 -PSKLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 260 LDGQEMDGRPLRVNVAAE 277
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 112 PEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEK 171
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVP--DLAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ + ++GRL N A + V P + ++Y+G L +V L+ F
Sbjct: 172 AVEMFHRYDVNGRLLTVNKAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLVELFSE 231
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
HG++ + V YD+DT SRGFGFVT + ++ A A+D ++L GR + V +A+
Sbjct: 232 HGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDAIAALDG--QSLEGRALRVNVAEE-- 287
Query: 244 GKPPQ 248
+PP+
Sbjct: 288 -RPPR 291
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 61 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 111
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 112 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 166
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 167 KEVMFPPGT 175
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 89 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 148
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 149 IHFHEINNKMVECKKA 164
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 59 AEEIKSVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
+++ + AD H K+FV GL+W T+++ L F GE++E ++ D T +SRG+
Sbjct: 5 SQQNATTHDADGNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGF 64
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVT 176
GF+T+ ++ ++ + +D + +A S P +K+++GG++ T
Sbjct: 65 GFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRS--HPKPVSKTKKIFVGGIAASTT 122
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
L FF ++G++EE ++ +D+ TN RGFGFV + + ++ L G+ + V
Sbjct: 123 EPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEV 182
Query: 237 KLADTHKGKPPQTQLP 252
K K +P + +P
Sbjct: 183 K-----KAQPKEVMMP 193
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL TT L + GEI + V+ D T +SRG+GFITYK E +A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
IDG+ A S + KL++GGL +VT E L +F ++G I E
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITE 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVK 237
V K++ ESRGFGFVT+ + KA+ PH R + K
Sbjct: 137 CEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKK 182
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA-V 222
RKL+IGGL+P T L +F+ + GEI + V D TN SRGFGF+TYK E A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 223 DDPHKTLGGRTIIVKLA 239
+ PH+ + G+T+ K A
Sbjct: 77 NRPHE-IDGKTVEAKRA 92
>gi|149046824|gb|EDL99598.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_g [Rattus
norvegicus]
Length = 208
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W+TT + L F G++ + + D TG+SRG+GF+ +K ES +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 61 EHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESIE 114
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 115 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 159
Score = 43.5 bits (101), Expect = 0.58, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 75 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 133
Query: 123 HMESTQSAL 131
E + +
Sbjct: 134 EEEPVKKIM 142
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 29/191 (15%)
Query: 52 GSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATG 111
GSQ+ E+ +S RK+FV GL+W TT + + F GE+ + + D+ TG
Sbjct: 50 GSQHAGSCEDEES--------RKIFVGGLSWETTVKDMKDYFSKFGEVTDATLKTDQNTG 101
Query: 112 KSRGYGFITY-------KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR 164
+SRG+GF+T+ + +E TQ L K ID + A E + +
Sbjct: 102 RSRGFGFVTFVDSTCVNRVIEQTQHTLHG--KNIDPKRAKARPGREPV-----------K 148
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGL PEV + + F ++G++EE + +D+ N+ R F FV++ T EA +
Sbjct: 149 KIFVGGLDPEVPEDEIRQHFSKYGKVEEVELPFDRSKNQRRFFCFVSFDTGEAVDALCQE 208
Query: 225 PHK-TLGGRTI 234
K LGG+ +
Sbjct: 209 SEKHVLGGKNV 219
Score = 67.0 bits (162), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D RK+++GGLS E T + + ++F + GE+ + ++ D++T SRGFGFVT+
Sbjct: 59 DEESRKIFVGGLSWETTVKDMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDSTCVN 118
Query: 220 KAVDDPHKTLGGRTIIVKLADTHKGKPP 247
+ ++ TL G+ I K A G+ P
Sbjct: 119 RVIEQTQHTLHGKNIDPKRAKARPGREP 146
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T E L F +G++ E ++ D+ATG++RG+GFI + ++ +
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-M 65
Query: 134 PSKLIDGRLAVCNLA------------CEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEV 179
+IDGR A + +S V R K+++GGL +T E
Sbjct: 66 DKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEE 125
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
N+F + G I + V YD +T RGFGF+T+ + +A + + L G+ + VK A
Sbjct: 126 FKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRA 185
Query: 240 DTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPPYP 291
P+ P + + PL G Y +N P SY N P P
Sbjct: 186 ------VPKEISPVSNIRSPLASGVNY----GGGSNRMPAN-SYFNNFAPGP 226
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 70 PVH------RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
PVH +K+FV GL + T E F G I + V+YD T + RG+GFIT+
Sbjct: 101 PVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDS 160
Query: 124 MESTQSALRAPSKLIDGRLAVCNLAC-EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLN 182
++ L ++G+L A + +S VS + + GG S + N
Sbjct: 161 DDAVDRVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFN 220
Query: 183 FF 184
F
Sbjct: 221 NF 222
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL TT L + GEI + V+ D T +SRG+GFITYK E +A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
IDG+ A S + KL++GGL +VT E L +F ++G I E
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITE 136
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAV-DDPHKTLGGRTIIVK 237
V K++ ESRGFGFVT+ + KA+ PH R + K
Sbjct: 137 CEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKK 182
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA-V 222
RKL+IGGL+P T L +F+ + GEI + V D TN SRGFGF+TYK E A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 223 DDPHKTLGGRTIIVKLA 239
+ PH+ + G+T+ K A
Sbjct: 77 NRPHE-IDGKTVEAKRA 92
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 44/270 (16%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W T+ + L F GE+ E ++ D+ATG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 134 PSKLIDGRLA------------VCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDG++ V N + L G + +K+++GGL+ VT
Sbjct: 67 -KHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSN--SKKIFVGGLASSVTEAEFK 123
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G I + V YD T RGFGF++Y + EA K + L G+ + VKLA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLA-- 181
Query: 242 HKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGY---SYPQNVPPYPTSSYTSP 298
VP + L Q T + Y Q P P S Y
Sbjct: 182 --------------VPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYG-- 225
Query: 299 NTAPVPYPTQPPISYPPIPLKKDPIGPIGH 328
+P + Y P + P GH
Sbjct: 226 --------VKPEVRYSPAVGNRGGFSPFGH 247
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA + T F G I + V+YD T + RG+GFI+Y E+ L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 133 APSKLIDGRLAVCNLAC 149
++G++ LA
Sbjct: 166 KTFHELNGKMVEVKLAV 182
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 62 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 112
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 113 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 167
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 168 KEVMFPPGT 176
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 90 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 149
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 150 IHFHEINNKMVECKKA 165
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K L
Sbjct: 70 KMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 130 KEHRLDGRQIDPKKAM-------AMKKEPVKKIFVGGLNPETTEERIREYFGAFGEIETI 182
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+ D +N+ RGF F+T+K EA KK ++ + + G
Sbjct: 183 ELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSG 220
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L + F + GE+ + ++ D +T SRGFGF+ +K K +
Sbjct: 70 KMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K +P
Sbjct: 130 KEHRLDGRQIDPKKAMAMKKEP 151
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
+PV +K+FV GL TT E + F GEIE + D + K RG+ FIT+K E+ +
Sbjct: 150 EPV-KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVK 208
Query: 129 SALR------APSKLIDGRLAVCNL 147
L + +K G+ +C +
Sbjct: 209 KILEKKYHNVSGTKDTSGKEGLCEI 233
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAVVPVPLPLGAGYPQAGKAHA 274
+ V LG G HA
Sbjct: 183 NNSTVGGAYGKLGNECSHWGPHHA 206
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HME 125
E
Sbjct: 213 EEE 215
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ETL + F G + + V+ D T +SRG+GF+TY + +A+
Sbjct: 14 RKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVGEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKA 180
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
++ DP K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 15 SAHDPC--KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQA 72
Query: 126 S-----TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTE 178
QS SK ID ++A A P + R K+++GGLS T E
Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSVNTTVE 123
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL 238
+ +F + G++++ + +DK TN RGFGFVT++ + +K + + + + K
Sbjct: 124 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKK 183
Query: 239 ADTHKGKPPQTQ-------LPAAVVPVPLPLGA-GYPQ------AGKAHANTPPVGYSYP 284
A + P + +P + L +G GYP A +++A P GY+Y
Sbjct: 184 AQPKEVMSPTSSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYAGLAP-GYTY- 241
Query: 285 QNVPPYPTSSY 295
P P ++Y
Sbjct: 242 -QFPAIPLTAY 251
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 153 SGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFV 210
SG+S PD A K++IGGLS + T E L +FG++GE++E V D T SRGFGFV
Sbjct: 8 SGLSP-PDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFV 66
Query: 211 TYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
T+ K + L +TI K+A + +P
Sbjct: 67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + R F FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKA 180
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 TTPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+T+++ L + F+ +GEI + ++ D++TG RG+GF+T+ + +
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVV-L 60
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+IDGR + ++A +K+++GG+ P +T E ++FG G + E
Sbjct: 61 DKHVIDGRTVEAKKSVP-RENMAASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEH 119
Query: 194 SVAYDKDTNESRGFGFVTY 212
+ D T SRGFGFVT+
Sbjct: 120 QIMQDHSTGRSRGFGFVTF 138
Score = 55.1 bits (131), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + +T+ L + F ++GEI + + D+ T RGFGFVT+ V D
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVLD 61
Query: 225 PHKTLGGRTIIVK 237
H + GRT+ K
Sbjct: 62 KH-VIDGRTVEAK 73
Score = 47.4 bits (111), Expect = 0.037, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
AS P +K+FV G+ + T E + F G + E ++ D +TG+SRG+GF+T+ + +
Sbjct: 83 ASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQ 142
Query: 126 STQSAL 131
+ L
Sbjct: 143 VVEDIL 148
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT+ S
Sbjct: 55 GGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGS 114
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
L+ P +DG+ A A +K+++GG+S + +++ + +F +
Sbjct: 115 VDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN---RTKKIFVGGVSQDTSSDEVKAYFNQ 171
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++EE + D+ T RGFGFVT++ + + + + TI K + K +P
Sbjct: 172 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE-----IHFHTIKNKKVECKKAQP 226
Query: 247 PQTQLPAAVV 256
+ P A+
Sbjct: 227 KEAVQPGALT 236
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W TT E L F G+I + V+ + +G+SRG+GF+T+ + L+
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 134 PSKLIDGRL---AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DGR CN + K+++GGL VT L FFGR+G++
Sbjct: 68 GPHTLDGRTIDPKPCNPRT-----LQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKV 122
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQ 250
E + YD++ +SRGFGF++++ + + ++ + L G+ + +K A+ G Q
Sbjct: 123 TEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
Query: 251 LPAAV 255
+ V
Sbjct: 183 NNSTV 187
>gi|71896731|ref|NP_001026314.1| heterogeneous nuclear ribonucleoprotein D0 [Gallus gallus]
gi|326918726|ref|XP_003205639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Meleagris gallopavo]
gi|53135954|emb|CAG32472.1| hypothetical protein RCJMB04_26e18 [Gallus gallus]
Length = 257
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 61 EHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGAFGEVESIE 114
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 115 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 159
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 75 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFK 133
Query: 123 HMESTQSAL 131
E + +
Sbjct: 134 EEEPVKKIM 142
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 43/241 (17%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
DP K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+T+
Sbjct: 18 DPC--KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVD 75
Query: 129 SALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLL 181
L SK ID ++A A P L R K+++GGLS T E +
Sbjct: 76 KVLAQTRHELDSKTIDPKVAFPR---------RAQPKLVTRTKKIFVGGLSVNTTIEDVK 126
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G++++ + +DK TN RGFGFVT++ + +K + + I K+ +
Sbjct: 127 QYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVEC 181
Query: 242 HKGKPPQTQLP-------AAVVPVPLP---LGA---GYPQ------AGKAHANTPPVGYS 282
K +P + P A V+P + LG GYP AG+++ + P GY+
Sbjct: 182 KKAQPKEVMSPTGSSRGRARVMPYGMDAFMLGIGMLGYPGFQATTYAGRSYTSLTP-GYT 240
Query: 283 Y 283
Y
Sbjct: 241 Y 241
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 16/169 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA- 133
+F+ GL W TT ++L F GE++E V+ D ATG+SRG+GF+T+K ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 134 ---PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEI 190
K+ID + A+ E S K+++GG+S + + FF + G +
Sbjct: 61 HYLDGKIIDPKRAIPRDEQERTS-----------KIFVGGVSQDANEQDFKKFFMQFGRV 109
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ + A + + P + L G+ I VK A
Sbjct: 110 VDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKA 157
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G++ + + F G + + ++ DK TG+ RG+GF+T+ + ++ L
Sbjct: 84 KIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ 143
Query: 134 PSKLI 138
P +++
Sbjct: 144 PLEIL 148
>gi|321459101|gb|EFX70158.1| hypothetical protein DAPPUDRAFT_189289 [Daphnia pulex]
Length = 334
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 66 ASADPV----HRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
S DP+ RKLFV GL+W TT + L F +GEIE V D TG+SRG+ F+ +
Sbjct: 57 TSQDPLGKDEDRKLFVGGLSWATTDKELREHFGKYGEIESITVKMDPQTGRSRGFAFLVF 116
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
K E+ + A +I+G+ V + SG K+++GGL + T E +
Sbjct: 117 KSAENLDKVMNAGEHIINGKR-VDPKKAKARSG----------KIFVGGLPQDTTEETIR 165
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+FFG G I E + +D+ N+ + F F+TY + P + + G+ + VK A
Sbjct: 166 SFFGTFGNIVEIEMPFDRVKNQRKNFCFITYDNENVVFDLLKTPKQVINGKEVDVKKA 223
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS T + L FG++GEIE +V D T SRGF F+ +K+ E K ++
Sbjct: 68 RKLFVGGLSWATTDKELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENLDKVMN 127
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
+ G+ + K A GK
Sbjct: 128 AGEHIINGKRVDPKKAKARSGK 149
>gi|255710315|gb|ACU30977.1| RNA-binding protein musashi [Ochlerotatus triseriatus]
Length = 270
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+ T + L F +GEIE + D TG+SRG+ FI +K ES +
Sbjct: 5 RKLFVGGLSKETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKVVA 64
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
I+G+ A Q K ++GGLSPE + E + FF ++G + E
Sbjct: 65 FEDHTINGKKVDPKKA-----------KARQGKTFVGGLSPETSDEEIKTFFEQYGNVVE 113
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+DK N+ +GF F+TY + + + P + +GG+ + VK A
Sbjct: 114 METPFDKMKNQRKGFCFITYDSEAVVTELLKTPKQMVGGKEVDVKRA 160
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL++GGLS E + L N FG++GEIE ++ D T SRGF F+ +K+ E+ K V
Sbjct: 5 RKLFVGGLSKETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKVVA 64
Query: 224 DPHKTLGGRTIIVKLADTHKGK 245
T+ G+ + K A +GK
Sbjct: 65 FEDHTINGKKVDPKKAKARQGK 86
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKA 180
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|357151715|ref|XP_003575880.1| PREDICTED: uncharacterized protein LOC100834641 [Brachypodium
distachyon]
Length = 419
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 33 RSLLDPLSKSQLVDLLSRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAA 92
R LLDP K +L LL+ S P++ I++ A A HR++FV GL L AA
Sbjct: 58 RRLLDPYPKPRLAALLASAASADPALLARIRAAADASLSHRRVFVHGLPPRADGPALEAA 117
Query: 93 FRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEG- 151
F G + + V+ A G+ +GYGF+T+K + + A+ AP AC G
Sbjct: 118 FSAFGPLADCHVV---AAGRCKGYGFLTFKSHAAARRAVCAPW-----------FACAGP 163
Query: 152 -LSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRG---- 206
SG SAV R++Y+ + P+ + E L FF GE+E G D D G
Sbjct: 164 DRSGASAV----GRRVYVANVGPDASVERLRTFFAGFGELEGGPFGLDVDGEAETGRPRS 219
Query: 207 --FGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ Y+ E A+KAV+ P++ GRT+ +LA
Sbjct: 220 QRYSLFVYREAEGARKAVEQPYRVFEGRTLRCQLA 254
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT+ S
Sbjct: 55 GGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGS 114
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
L+ P +DG+ A A +K+++GG+S + +++ + +F +
Sbjct: 115 VDKVLKCPIHTLDGKKIDPKHATPKNRAKQA---NRTKKIFVGGVSQDTSSDEVKAYFNQ 171
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++EE + D+ T RGFGFVT++ + + + + TI K + K +P
Sbjct: 172 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE-----IHFHTIKNKKVECKKAQP 226
Query: 247 PQTQLPAAVV 256
+ P A+
Sbjct: 227 KEAVQPGALT 236
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 56 PSIAEEIKSVASA-DPVHR-------KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYD 107
P E++S A A VH+ K+F+ GL W TT ++L F GE+ E V+ D
Sbjct: 90 PEPEHELESAAPAFGTVHKASAKDDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRD 149
Query: 108 KATGKSRGYGFITYKHMESTQSALRA----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQ 163
TG+SRG+GF+T+K ++ + K+ID + A+ E S
Sbjct: 150 SNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDGKIIDPKRAIPRDEQEKTS---------- 199
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
K+++GG+S + T + FF + G + + ++ DKDT RGFGFVT+++ ++
Sbjct: 200 -KIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDACIN 258
Query: 224 DPHKTLGGRTIIVKLA 239
P + + G+ I VK A
Sbjct: 259 IPLE-IHGKPIEVKRA 273
>gi|413943620|gb|AFW76269.1| hypothetical protein ZEAMMB73_511559 [Zea mays]
Length = 172
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
D K+FV GLAW T SE L A F V+G+I E VI D+ATG+S+GYGF+T++ ES
Sbjct: 29 GDTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFQDPESA 88
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVP 159
+ A P +IDGR A CNLA G G AVP
Sbjct: 89 RMACMDPYPVIDGRRANCNLAILGRPG-PAVP 119
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D K+++GGL+ E +E L F +G+I E V D+ T S+G+GFVT++ E+A+
Sbjct: 30 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFQDPESAR 89
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
A DP+ + GR LA
Sbjct: 90 MACMDPYPVIDGRRANCNLA 109
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 56 PSIAEEIKSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSR 114
P A + +P H RKLF+ GL + TT ++L F GEI + V+ D T +SR
Sbjct: 30 PMFATVSQEDGKNEPEHVRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSR 89
Query: 115 GYGFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPE 174
G+GFITY A A +DGR+ A +KL++GGL +
Sbjct: 90 GFGFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDD 149
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTI 234
E L +F +G I S+ DK+T + RGFGFV + + K + + G+ +
Sbjct: 150 HEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHV 209
Query: 235 IVKLA 239
VK A
Sbjct: 210 DVKKA 214
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F G++ + + D TG+SRG+GF+ +K
Sbjct: 87 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 146
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 147 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 200
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 201 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 255
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + G++ + ++ D T SRGFGFV +K
Sbjct: 87 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 146
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 147 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 178
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 139 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 238
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTKEP 161
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 212
Query: 123 HME 125
E
Sbjct: 213 EEE 215
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 18/169 (10%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
+AS D H K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+T+
Sbjct: 9 GLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF 68
Query: 122 KHMES-----TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
QS SK ID ++A A P + R K+++GGLS
Sbjct: 69 MDQAGVDKVLAQSRHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
T E + +F + G++++ + +DK TN RGFGFVT+++ + +K +
Sbjct: 120 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T E L +FG+ GE++E V D T SRGFGFVT+ K +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L +TI K+A + +P
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQP 102
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 36 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 95
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 96 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 149
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 150 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 204
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 36 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 95
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 96 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 127
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 98/168 (58%), Gaps = 14/168 (8%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+FV GL W+T+ E L F G+++ ++ D+ TG+SRG+ F+T++ + +A+
Sbjct: 1 MFVGGLNWDTSDEGLRNYFSQFGKVDACTIMRDQ-TGRSRGFAFLTFEDPAAV-NAVMVR 58
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQ---RKLYIGGLSPEVTTEVLLNFFGRHGEIE 191
+DG++ + A+P +KL++GGL+P VTTE L +F + G++
Sbjct: 59 EHYLDGKI---------IDPKRAIPRQEHHRTQKLFVGGLAPTVTTESLRAYFAQFGKVV 109
Query: 192 EGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +V D+D++ S+GFGFVT++ ++ ++ + H + G+ I VKLA
Sbjct: 110 DATVMVDRDSSRSKGFGFVTFEDIDNIERLLGLGHLEIDGKMIDVKLA 157
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 72 HR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
HR KLFV GLA T+E+L A F G++ + V+ D+ + +S+G+GF+T++ +++ +
Sbjct: 79 HRTQKLFVGGLAPTVTTESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIER 138
Query: 130 ALRAPSKLIDGRLAVCNLA 148
L IDG++ LA
Sbjct: 139 LLGLGHLEIDGKMIDVKLA 157
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+ F+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGF FVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F +G+IE V D TG+SRG+ FI + ES +
Sbjct: 74 RKLFVGGLSWETTDKELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 133
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +I+ + V + G K+++GGLS E++ + + NFF + G I E
Sbjct: 134 AGDHVINNK-KVDPKKAKARHG----------KIFVGGLSTELSDDDIKNFFSQFGTIVE 182
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + + + +T+ G+ + VK A
Sbjct: 183 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKA 229
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 137 LIDGRLAVCNLACEGLSGVSAVPD-LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSV 195
+ DG A + S D L RKL++GGLS E T + L F +G+IE +V
Sbjct: 46 MGDGDAADNGQESQEDRSASGNQDSLNDRKLFVGGLSWETTDKELREHFSSYGDIESINV 105
Query: 196 AYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK 245
D +T SRGF F+ + E+ K + + + + K A GK
Sbjct: 106 KTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHVINNKKVDPKKAKARHGK 155
>gi|194390304|dbj|BAG61914.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL--- 131
+F+ GL+W+T+ + L GE+ + + D TG+SRG+GF+ +K S L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 132 --RAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
+ SKLID + A + L G +K+++GGLSP+ + E + +FG GE
Sbjct: 61 EHKLDSKLIDPKRA------KALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGE 109
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
IE + D TNE RGF F+TY E KK ++ + +G +K+A
Sbjct: 110 IENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 159
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 166 LYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDP 225
++IGGLS + + + L + R GE+ + ++ D T SRGFGFV +K + K ++
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 226 HKTLGGRTIIVKLADTHKGK-PPQTQLPAAVVP 257
L + I K A KGK PP+ + P
Sbjct: 61 EHKLDSKLIDPKRAKALKGKEPPKKVFVGGLSP 93
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 187
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 188 KEVMFPPGT 196
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 149 CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFG 208
+G SG + K++IGGLS + + + L ++F + GEI E V D T SRGFG
Sbjct: 6 SQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 209 FVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
FVT+ + K + PH L +TI K+A + +P
Sbjct: 66 FVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M +A+
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L ++F +G+I+
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGFGFVT+ + K V H T+ G V+ A
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKA 187
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E A +KLFV G+ +T L F +G+I+ +I D+ +GK RG+
Sbjct: 96 AVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGF 155
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 156 GFVTFDDHDPVDKIVLQKHHTINGHNAEVRKA 187
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
+ +D KLFV G++W T+ E F +GEI + ++ D+ TG+ RG+GFIT+
Sbjct: 191 MGESDEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADP 250
Query: 125 ESTQSALRAPSKLIDGRLAVCNLAC--EGLS--GVSAVPDLAQRKLYIGGLSPEVTTEVL 180
L +IDGR EG+ GVS RK+++GG+ +T + L
Sbjct: 251 AVADKVLE-EDHVIDGRAVEVKKTVPREGMEVRGVSKT-----RKIFVGGIPSSLTEDEL 304
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH-KTLGGRTIIVKLA 239
++F +G I E + D T SRGFGFVT+ + +A ++ + LGG+ + +K A
Sbjct: 305 KDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKA 364
Query: 240 D 240
+
Sbjct: 365 E 365
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDVAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVGELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 49 SRLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDK 108
R+G +++ E A +K+FV G+ +T L F +G+IE ++ D+
Sbjct: 81 GRVGELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Query: 109 ATGKSRGYGFITYKHMES 126
+GK RG+ F+T+ +S
Sbjct: 141 GSGKKRGFAFVTFDDHDS 158
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV G+AW TT ET F+ +G I + ++ DK T RG+GF+T+ L
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLE- 152
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+IDGR +S+ +K+++GG+ P +T + L F +G++ E
Sbjct: 153 DEHVIDGRTVEVKRTVP--KELSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEH 210
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPH-KTLGGRTI 234
+ D T SRGFGFVT+++ +A ++ + + LGG+ +
Sbjct: 211 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQV 252
>gi|413943621|gb|AFW76270.1| hypothetical protein ZEAMMB73_511559 [Zea mays]
Length = 153
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 68 ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 127
D K+FV GLAW T SE L A F V+G+I E VI D+ATG+S+GYGF+T++ ES
Sbjct: 29 GDTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFQDPESA 88
Query: 128 QSALRAPSKLIDGRLAVCNLACEGLSGVSAVP 159
+ A P +IDGR A CNLA G G AVP
Sbjct: 89 RMACMDPYPVIDGRRANCNLAILGRPG-PAVP 119
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
D K+++GGL+ E +E L F +G+I E V D+ T S+G+GFVT++ E+A+
Sbjct: 30 DTTFTKVFVGGLAWETRSEGLRAHFEVYGDILEAVVITDRATGRSKGYGFVTFQDPESAR 89
Query: 220 KAVDDPHKTLGGRTIIVKLA 239
A DP+ + GR LA
Sbjct: 90 MACMDPYPVIDGRRANCNLA 109
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 130/297 (43%), Gaps = 33/297 (11%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 135 -----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRH 187
SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 61 HHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQF 111
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK-P 246
G++E+ + +DK TN RGFGFVT+++ + +K + + + + K A + P
Sbjct: 112 GKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFP 171
Query: 247 PQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP-----QNVPPY 290
P T+ LP + L +G GYP G+ + P GY +P P
Sbjct: 172 PGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVA 231
Query: 291 PTSSYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPIGHPATAPKRRIASILGRVSSN 347
+ + + Y QP P P +P P G P +A + G S +
Sbjct: 232 AAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSPGPVADLYGPASQD 288
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T++ + +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCE 147
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 148 IHFHEINNKMVECKKA 163
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV L ++ SE L F G +E VIY++ T +SRG+GF+T +E + A+
Sbjct: 147 KLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDT 206
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEI 190
++ + GRL N A S P Q ++Y+G L +V L F HG++
Sbjct: 207 FNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKV 266
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLAD 240
+ V YD+D+ SRGFGFVT A+ ++L GR I V +A+
Sbjct: 267 VDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAE 317
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV L +N S L F G +E VIYDK TG+SRG+GF+T +E ++A +
Sbjct: 87 KLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQ 146
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSA--------------VPDLAQRKLYIGGLSPEVTTE 178
+ +DGR N SA P ++ ++++ L+ V
Sbjct: 147 FNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDNV 206
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVK 237
L + F G + E V YD+++ SRGFGFVT+ + + A+ + L GR I V
Sbjct: 207 ALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVS 266
Query: 238 LADTHKGKPPQ 248
LAD+ KP Q
Sbjct: 267 LADS---KPKQ 274
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 66 ASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHME 125
++ DP K+F+ GL+W TT E L F +GE++E V+ D T +SRG+GF+T+
Sbjct: 15 SAHDPC--KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQA 72
Query: 126 S-----TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTE 178
QS SK ID ++A A P + R K+++GGLS T E
Sbjct: 73 GVDKVLAQSRHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSVNTTVE 123
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKL 238
+ +F + G++++ + +DK TN RGFGFVT++ + +K + + + + K
Sbjct: 124 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKK 183
Query: 239 ADTHKGKPPQTQ-------LPAAVVPVPLPLGA-GYPQ------AGKAHANTPPVGYSYP 284
A + P + +P + L +G GYP A +++A P GY+Y
Sbjct: 184 AQPKEVMSPTSSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYAGLAP-GYTY- 241
Query: 285 QNVPPYPTSSY 295
P P ++Y
Sbjct: 242 -QFPAIPLTAY 251
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 153 SGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFV 210
SG+S PD A K++IGGLS + T E L +FG++GE++E V D T SRGFGFV
Sbjct: 8 SGLSP-PDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFV 66
Query: 211 TYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
T+ K + L +TI K+A + +P
Sbjct: 67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L + G++ + V+ D A+ +SRG+GF+T+ M+ +++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L +F +G+IE
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E + A +KLFV G+ +T L F +G+IE +I DK +GK RG+
Sbjct: 84 AVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGF 143
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 144 GFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P KLFV L +N ++ L F GE+ + +I D+ TG SRG+GF+T +E +
Sbjct: 110 PEGTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEK 169
Query: 130 ALRAPSK-LIDGRLAVCNLACEGLSGVS--AVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
+ ++ ++GRL N A + V + + K+Y+G L + LL F
Sbjct: 170 GVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKIYVGNLPWQADDNSLLQLFSE 229
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHK 243
HG++ E V YD++T SRGFGFVTY + A+ T + GR + V +A+ +
Sbjct: 230 HGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVNIAEDRR 287
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+++ + A K++V L W +L F HG++ E V+YD+ TG+SRG+GF+T
Sbjct: 195 KVERPSQAGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVT 254
Query: 121 YKHMESTQSALRAPSKL-IDGRLAVCNLA 148
Y A+ A +DGR N+A
Sbjct: 255 YSSESEVNDAIAALDGTDMDGRPLRVNIA 283
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L + G++ + V+ D A+ +SRG+GF+T+ M+ +++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L +F +G+IE
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E + A +KLFV G+ +T L F +G+IE +I DK +GK RG+
Sbjct: 84 AVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGF 143
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 144 GFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P KLFV L +N ++ L F GE+ + +I D+ TG SRG+GF+T +E +
Sbjct: 110 PEWTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEK 169
Query: 130 ALRAPSK-LIDGRLAVCNLACEGLSGVS--AVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
+ ++ ++GRL N A + V + + K+Y+G L + LL F
Sbjct: 170 GVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKIYVGNLPWQADDNSLLQLFSE 229
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHK 243
HG++ E V YD++T SRGFGFVTY + A+ T + GR + V +A+ +
Sbjct: 230 HGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVNIAEDRR 287
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 61 EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT 120
+++ + A K++V L W +L F HG++ E V+YD+ TG+SRG+GF+T
Sbjct: 195 KVERPSQAGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVT 254
Query: 121 YKHMESTQSALRAPSKL-IDGRLAVCNLA 148
Y A+ A +DGR N+A
Sbjct: 255 YSSESEVNDAIAALDGTDMDGRPLRVNIA 283
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D +TG+SRG+GF+T+K + T + +
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK-TVNIVMV 178
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DG++ + A+P Q K+++GG+S E T + +F + G +
Sbjct: 179 KEHFLDGKI---------IDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRV 229
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT++ ++ P + + G+ I VK A
Sbjct: 230 VDATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEVKKA 277
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P KLFV L ++ S+ L F G +E VIY++ T +SRG+GF+T +E +S
Sbjct: 106 PEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAES 165
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPDL----AQRKLYIGGLSPEVTTEVLLNFF 184
A+ ++ IDGRL N A + P + +Y+G L +V L F
Sbjct: 166 AVEKFNRYDIDGRLLTVNKASPRGTRPERPPPRRSFESSLSIYVGNLPWDVDNTRLKQIF 225
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD-PHKTLGGRTIIVKLAD 240
+HG + V YD+++ SRGFGFVT AV ++L GR I V +A+
Sbjct: 226 SKHGNVVNARVVYDRESGRSRGFGFVTMSDETEMNDAVAALDGESLDGRAIKVSVAE 282
>gi|444725879|gb|ELW66430.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 191
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+RGL++ TT E+L + F G + + V+ D T SRG+GF+TY +E + ++A
Sbjct: 23 KLFIRGLSFETTDESLRSHFEQWGTLTDCMVMRDPNTKHSRGFGFVTYATVEEVDATMKA 82
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR+ L +K+++GG+ + L ++F ++G+IE
Sbjct: 83 RPHEVDGRVVEPKRVISREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 142
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FV Y ++ K V + T+ G V+ A
Sbjct: 143 KIMTDRGSGKKRGFAFVIYDDHDSVDKIVIQKYHTVNGHNCEVRKA 188
Score = 40.4 bits (93), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 58 IAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYG 117
I+ E A +K+FV G+ +T L F +G+IE ++ D+ +GK RG+
Sbjct: 98 ISREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIKIMTDRGSGKKRGFA 157
Query: 118 FITYKHMES 126
F+ Y +S
Sbjct: 158 FVIYDDHDS 166
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL+W+T+ + L F GE+ + + D TG+SRG+GFI +K L
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+DGR A A+ +K+++GGL+PE T E + +FG GEIE
Sbjct: 130 KEHRLDGRQIDPKKAM-------AMKKEPVKKIFVGGLNPETTEERIREYFGAFGEIETI 182
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGG 231
+ D +N+ RGF F+T+K EA KK ++ + + G
Sbjct: 183 ELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSG 220
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K+++GGLS + + + L ++F + GE+ + ++ D +T SRGFGF+ +K K +
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L GR I K A K +P
Sbjct: 130 KEHRLDGRQIDPKKAMAMKKEP 151
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 69 DPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQ 128
+PV +K+FV GL TT E + F GEIE + D + K RG+ FIT+K E+ +
Sbjct: 150 EPV-KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVK 208
Query: 129 SALR------APSKLIDGRLAVCNL 147
L + +K G+ +C +
Sbjct: 209 KILEKKYHNVSGTKDTSGKEGLCEI 233
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 63 KSVASADPVH-RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
KS + +P RKLF+ GL++ TT E+L + G + + V+ D T +SRG+GF+TY
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSRSEQWGALTDCVVMRDPNTKRSRGFGFVTY 62
Query: 122 KHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+E +A+ A +DGR+ A L +K+++GG+ + L
Sbjct: 63 ATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++F ++G+IE + D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 33/298 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK- 245
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A +
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMF 192
Query: 246 PPQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP-----QNVPP 289
PP T+ LP + L +G GYP G+ + P GY +P P
Sbjct: 193 PPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPV 252
Query: 290 YPTSSYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPIGHPATAPKRRIASILGRVSSN 347
+ + + Y QP P P +P P G P +A + G S +
Sbjct: 253 AAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSPGPVADLYGPASQD 310
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T + L FR +GE+ E ++ D+ TG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVV-M 65
Query: 134 PSKLIDGRLAVCNLAC---------EGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNF 183
+IDGR A + P + +K+++GGL+ VT +
Sbjct: 66 DKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKY 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + EA ++ + L G+ + VK A +
Sbjct: 126 FDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 GKPPQTQLP 252
P ++ P
Sbjct: 186 HSPGPSRSP 194
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA T F G I + V+YD T + RG+GFITY E+ + L
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLH 165
Query: 133 APSKLIDGRL 142
++G++
Sbjct: 166 KTFHELNGKM 175
>gi|344249843|gb|EGW05947.1| Heterogeneous nuclear ribonucleoprotein D0 [Cricetulus griseus]
Length = 257
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 135 SKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGS 194
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 61 EHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESIE 114
Query: 195 VAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 115 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 159
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 75 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 133
Query: 123 HMESTQSAL 131
E + +
Sbjct: 134 EEEPVKKIM 142
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 15/170 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT E+L F +GE+ E V+ D TG+SRG+GF+T+K ++ +
Sbjct: 169 KMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVNIVMVK 228
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T +F + G
Sbjct: 229 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQEATETDFREYFTQFGR 277
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+ + A + A++ P + + I VK A
Sbjct: 278 VLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIEVKKA 327
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D TG+SRG+GF+T+K + T + +
Sbjct: 48 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAK-TVNIVMV 106
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DG++ + A+P Q K+++GG+S E T + ++F + G +
Sbjct: 107 KEHFLDGKI---------IDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRV 157
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+++ E + H + G+ I VK A
Sbjct: 158 VDATLMMDKDTGRPRGFGFVTFESEEGVDACLKT-HLEIHGKPIEVKKA 205
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 54/275 (19%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W T+ + L F GE+ E ++ D+ATG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERVVLL 66
Query: 134 PSKLIDGRL------------AVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLL 181
+IDG++ AV N + L G S P +K+++GGL+ VT
Sbjct: 67 -KHIIDGKIVEAKKAVPRDDHAVFNKSNSSLQG-SPGPS-TTKKIFVGGLASSVTEAEFK 123
Query: 182 NFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADT 241
+F + G I + V YD T RGFGF++Y + +A K + L G+ + VKLA
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQKTFHELNGKMVEVKLA-- 181
Query: 242 HKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYS--------YPQNVPPYPTS 293
VP + L + N G S Y Q P P S
Sbjct: 182 --------------VPKEMAL-----NTMRNQMNVNSFGSSRISTLLNEYTQGFSPSPIS 222
Query: 294 SYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPIGH 328
Y +P + Y P + P GH
Sbjct: 223 GYG----------VKPEVRYSPAVGNRGGFSPFGH 247
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA + T F G I + V+YD T + RG+GFI+Y ++ L+
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQ 165
Query: 133 APSKLIDGRLAVCNLAC 149
++G++ LA
Sbjct: 166 KTFHELNGKMVEVKLAV 182
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ++G+SRG+GF+T+K + T + +
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPK-TVNIVMV 171
Query: 134 PSKLIDGRLAV---CNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRH 187
+DG++ C+ C + A+P Q K+++GG+S + T + +F +
Sbjct: 172 KEHFLDGKIVSLLPCHNPC--IDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQF 229
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G + + ++ DKDT RGFGFVT+++ ++ P + + G+ I VK A
Sbjct: 230 GRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEVKKA 280
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 29/184 (15%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L ++ SE L + F G +E VIY++AT +SRG+GF+T +E + A+
Sbjct: 118 KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEM 177
Query: 134 PSKL-IDGRLAVCNLACEGLSGVSAVPDLAQR--------------KLYIGGLSPEVTTE 178
S ++GR+ N A P AQ ++Y+G L EV
Sbjct: 178 FSGYELNGRVLTVN---------KAAPKGAQPERPPRPPRSFSSGLRVYVGNLPWEVDDA 228
Query: 179 VLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEAAKKAVDDPHKTLGGRTII 235
L F HG++E+ V YD++T SRGFGFVT + + A A+D ++L GR I
Sbjct: 229 RLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALD--GQSLDGRAIR 286
Query: 236 VKLA 239
V +A
Sbjct: 287 VNVA 290
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAV 222
+ K+++G L ++ +E L + FG+ G +E V Y++ T+ SRGFGFVT T+E KKAV
Sbjct: 116 EDKIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAV 175
Query: 223 DD-PHKTLGGRTIIVKLA 239
+ L GR + V A
Sbjct: 176 EMFSGYELNGRVLTVNKA 193
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L + G++ + V+ D A+ +SRG+GF+T+ M+ +++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L +F +G+IE
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E + A +KLFV G+ +T L F +G+IE +I DK +GK RG+
Sbjct: 84 AVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGF 143
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 144 GFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT ++L + G++ + V+ D A+ +SRG+GF+T+ M+ +++
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L +F +G+IE
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ DK + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E + A +KLFV G+ +T L F +G+IE +I DK +GK RG+
Sbjct: 84 AVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGF 143
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLA 148
GF+T+ + + I+G A A
Sbjct: 144 GFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D TG+SRG+GF+T+K ++ +
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 176
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S + T + +FF + G
Sbjct: 177 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQDTTDQEFRDFFAQFGR 225
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGFVT+++ + P + + G+ I VK A
Sbjct: 226 VIDATLMMDKDTGRPRGFGFVTFESEAGVDNCISIPLE-IHGKPIEVKRA 274
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|213511640|ref|NP_001134235.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|209731708|gb|ACI66723.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|303664010|gb|ADM16122.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 228
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 84/167 (50%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L F G + + V+ D A +SRG+GF TY + +A+
Sbjct: 13 RKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFATYSGVNEVDAAME 72
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGRL A + +K+++GG+ + L ++F + G+IE
Sbjct: 73 ARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQFGKIEV 132
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ +A + V + TL G V+ A
Sbjct: 133 IDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKA 179
Score = 40.0 bits (92), Expect = 5.8, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 50 RLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKA 109
RL +++ E S A +K+FV G+ +T L F G+IE ++ D+
Sbjct: 81 RLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQFGKIEVIDIMTDRT 140
Query: 110 TGKSRGYGFITY 121
+GK RG+ F+T+
Sbjct: 141 SGKKRGFAFVTF 152
>gi|125545851|gb|EAY91990.1| hypothetical protein OsI_13679 [Oryza sativa Indica Group]
Length = 291
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 43/278 (15%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSAL- 131
RKLFV GL T L F +GE+ V+ D A+G SRG+GF+ + +T AL
Sbjct: 5 RKLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAATLRALA 64
Query: 132 --RAPSKLIDGRLAVCNLACEGLSGVSAVPDLA-------------QRKLYIGGLSPEVT 176
P+ + GR A + P + Q+K+++GGL VT
Sbjct: 65 DDEMPNHVFRGRKVDVKRAERRHAHKQTSPSIKNQNDSVQKNQFIFQKKVFVGGLHETVT 124
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
+ L+++F + G I + V ++ TN +RGFGF+++ + EA K + + L GR + V
Sbjct: 125 VKDLISYFEKFGTITDAVVMRNRITNRARGFGFISFDSHEAVCKILLNRFHNLNGRDVEV 184
Query: 237 KLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH----ANTPPVGYSYPQNVPPYPT 292
K+A +P Y +A H + P+ Y Y + V +P
Sbjct: 185 KIA--------------------VPKSPTYSEAKYYHMRMDMSLSPITY-YDRMVHVHPY 223
Query: 293 SSYTSPNTAPVPYPTQPPISY-PPIPLKKDPI-GPIGH 328
+ YT P+ + T Y PI GPIGH
Sbjct: 224 TPYTFGCVTPLAHLTHSGYGYGGPIDYSCYAYGGPIGH 261
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L +RKL++ GL + L F R+GE+ V D + SRGFGFV + A +
Sbjct: 2 LEERKLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAATLR 61
Query: 221 AVDD---PHKTLGGRTIIVKLAD---THKGKPP 247
A+ D P+ GR + VK A+ HK P
Sbjct: 62 ALADDEMPNHVFRGRKVDVKRAERRHAHKQTSP 94
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 59 AEEIKSVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++ S + D H K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+
Sbjct: 5 GSQVTSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGF 64
Query: 117 GFITYKHMESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIG 169
GF+T+ S L P SK ID ++A A P + R K+++G
Sbjct: 65 GFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVG 115
Query: 170 GLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
GLS E + +F + G++E+ + +DK TN RGFGF+T++ + +K +
Sbjct: 116 GLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCE 169
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 147 LACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
+ +G S P+ +Q K++IGGLS + + + L ++F + GEI E V D T
Sbjct: 1 MEGDGSQVTSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGFVT+ + K + PH L +TI K+A + +P
Sbjct: 61 SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQP 103
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GFIT++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T++ T + +
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRD-PKTVNIVMV 161
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEI 190
+DG++ + A+P Q K+++GG+S E T + +FF + G +
Sbjct: 162 KEHYLDGKI---------IDPKRAIPREEQEKTAKIFVGGVSQEATEQDFKSFFEQFGRV 212
Query: 191 EEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ ++ DKDT RGFGFVT+ A + P L G+ I VK A
Sbjct: 213 IDATLMMDKDTGRPRGFGFVTFDGEAAVDACLQGPLAIL-GKPIEVKRA 260
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST-----Q 128
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GFI +K ES Q
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 129 SALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHG 188
+ K+ID + A E + +K+++GGLSP+ E + +FG G
Sbjct: 138 KEHKLNGKVIDPKRAKAMKTKEPI-----------KKIFVGGLSPDTPEEKIREYFGGFG 186
Query: 189 EIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
E+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 187 EVESIELPMDNKTNKRRGFCFITFKDEEPVKKIMEKKYHNVGLSKCEIKVA 237
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGF+ +K E+ K +D
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 138 KEHKLNGKVIDPKRAKAMKTKEP 160
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +P+ +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 153 KAMKTKEPI-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 211
Query: 123 HMESTQSAL 131
E + +
Sbjct: 212 DEEPVKKIM 220
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 106 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 159
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 160 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 205
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 106 KEHKLNGKVIDPKRAKAMKTKEP 128
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 121 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 179
Query: 123 HME 125
E
Sbjct: 180 EEE 182
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
DP KLFV GL+W T+SE L F + G + + ++ D T +SRG+GFIT+ S
Sbjct: 49 GGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGS 108
Query: 127 TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGR 186
L+ P +DG+ A A +K+++GG+S + ++E + +F +
Sbjct: 109 VDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN---RTKKIFVGGVSQDTSSEEVKAYFNQ 165
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++EE + D+ T RGFGFVT++ + + + + TI K + K +P
Sbjct: 166 FGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE-----IHFHTIKNKKVECKKAQP 220
Query: 247 PQTQLPAAVV 256
+ P A+
Sbjct: 221 KEAVQPGALA 230
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
+AS D H K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+T+
Sbjct: 9 GLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF 68
Query: 122 KHMES-----TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
QS SK ID ++A A P + R K+++GGLS
Sbjct: 69 MDQAGVDKVLAQSRHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
T E + ++F + G++++ + +DK TN RGFGFVT+++ + +K +
Sbjct: 120 TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T E L +FG+ GE++E V D T SRGFGFVT+ K +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L +TI K+A + +P
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQP 102
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ +G+SRG+GF+T +E
Sbjct: 102 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 161
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ ++ I GRL N A + S V P + + Y+G L + L+ F
Sbjct: 162 AIETFNRYDISGRLLNVNRAAQRGSRVERPPRRFASSFRAYVGNLPWQAEDSRLVQMFSE 221
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVE---AAKKAVDDPHKTLGGRTIIVKLA 239
HGE+ ++ YD++T SRGFGFVT + E +A A+D + + GR + V +A
Sbjct: 222 HGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG--QEMDGRPLRVNVA 275
Score = 59.3 bits (142), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 148 ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
A G +G +A P + K+Y+G L +V +E L F + G +E V Y++++ +SRGF
Sbjct: 90 ASGGDAGYTAEPP-EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGF 148
Query: 208 GFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLADTHKG----KPPQ 248
GFVT T+E A KA++ ++ + GR + V A +G +PP+
Sbjct: 149 GFVTMSTIEEADKAIETFNRYDISGRLLNVNRA-AQRGSRVERPPR 193
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+ +V L W L F HGE+ ++YD+ TG+SRG+GF+T E SA+ A
Sbjct: 200 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 259
Query: 134 -PSKLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 260 LDGQEMDGRPLRVNVAAE 277
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 64 SVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKH 123
S A DP K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+
Sbjct: 14 SDAQHDP--GKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFAD 71
Query: 124 MESTQSALRAP-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVT 176
S L P SK ID ++A A P + R K+++GGLS
Sbjct: 72 PASVDKVLAQPHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTV 122
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
E + +F + G++E+ + +DK TN RGFGFVT++ + +K +
Sbjct: 123 VEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 147 LACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
+ +G+ S P AQ K++IGGLS + + + L ++F + GEI E V D T
Sbjct: 1 MEADGIQASSGSPSDAQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKR 60
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGFVT+ + K + PH L +TI K+A + +P
Sbjct: 61 SRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQP 103
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 64 SVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITY 121
+AS D H K+F+ GL+W TT E L F GE++E V+ D T +SRG+GF+T+
Sbjct: 9 GLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF 68
Query: 122 KHMES-----TQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPE 174
QS SK ID ++A A P + R K+++GGLS
Sbjct: 69 MDQAGVDKVLAQSRHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSVN 119
Query: 175 VTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
T E + ++F + G++++ + +DK TN RGFGFVT+++ + +K +
Sbjct: 120 TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T E L +FG+ GE++E V D T SRGFGFVT+ K +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 225 PHKTLGGRTIIVKLADTHKGKP 246
L +TI K+A + +P
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQP 102
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|209875917|ref|XP_002139401.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555007|gb|EEA05052.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 395
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 67 SADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
S V K+F GL+ TT+ +L F +GEI + V+ +K TG+SRG+GFIT+ ES
Sbjct: 8 SGPTVPAKIFCGGLSDVTTNTSLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEES 67
Query: 127 TQSALRAPSKLIDGRLAVC---------------------NLACEGLSGVSAVPD----- 160
+ L +P +++DG+ C N +S AV +
Sbjct: 68 VDAVLASP-QIVDGKEIDCKRAVPRGAIQTNETEGGDPGDNKVTSSVSSSGAVTNNNSSG 126
Query: 161 -LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
K+++GGL T E L FG++G I+ SV D+DTN RGFGFV Y++ E+ +
Sbjct: 127 TFNATKIFVGGLPQSCTDEKLREHFGKYGMIKNLSVMVDRDTNRHRGFGFVEYESPESVE 186
Query: 220 KAV 222
+ +
Sbjct: 187 EVM 189
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++ GGLS T L F +GEI + V +K T SRGFGF+T+ + E+ +
Sbjct: 15 KIFCGGLSDVTTNTSLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESVDAVLAS 74
Query: 225 PHKTLGGRTIIVKLA---------DTHKGKPPQTQLPAAV 255
P + + G+ I K A +T G P ++ ++V
Sbjct: 75 P-QIVDGKEIDCKRAVPRGAIQTNETEGGDPGDNKVTSSV 113
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV GL + T E L F +G I+ +V+ D+ T + RG+GF+ Y+ ES + +R
Sbjct: 132 KIFVGGLPQSCTDEKLREHFGKYGMIKNLSVMVDRDTNRHRGFGFVEYESPESVEEVMRH 191
Query: 134 -PSKLIDGRLAVCNLA 148
ID + C A
Sbjct: 192 YYDHQIDNKWVECKKA 207
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLF+ G++W+T + L FR +GE+ E ++ D+ TG++RG+GF+ + + +
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVV-M 65
Query: 134 PSKLIDGRLAVCNLAC---------EGLSGVSAVPDLAQ-RKLYIGGLSPEVTTEVLLNF 183
+IDGR A + P + +K+++GGL+ VT +
Sbjct: 66 DKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKY 125
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
F + G I + V YD +T RGFGF+TY + EA ++ + L G+ + VK A +
Sbjct: 126 FDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKE 185
Query: 244 GKPPQTQLP 252
P ++ P
Sbjct: 186 HSPGPSRSP 194
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GLA T F G I + V+YD T + RG+GFITY E+ + L
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLH 165
Query: 133 APSKLIDGRL 142
++G++
Sbjct: 166 KTFHELNGKM 175
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 33/297 (11%)
Query: 75 LFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRAP 134
+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 135 -----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGRH 187
SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 61 HHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQF 111
Query: 188 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGK-P 246
G++E+ + +DK TN RGFGFVT++ + +K + + + + K A + P
Sbjct: 112 GKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFP 171
Query: 247 PQTQ-----LPAAVVPVPLPLGA-GYPQ----AGKAHAN-TPPVGYSYP-----QNVPPY 290
P T+ LP + L +G GYP G+ + P GY +P P
Sbjct: 172 PGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVA 231
Query: 291 PTSSYTSPNTAPVPYPTQPPISYPPIPLKKDPIGPIGHPATAPKRRIASILGRVSSN 347
+ + + Y QP P P +P P G P +A + G S +
Sbjct: 232 AAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSPGPVADLYGPASQD 288
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 148 IHFHEINNKMVECKKA 163
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+FV L ++ S L F G +E VIYDK TG+SRG+GF+T E ++A +
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 134 PSKL-IDGRLAVCNLA---------CEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNF 183
+ +DGR N + ++Y+G L+ V + L
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETL 207
Query: 184 FGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTH 242
F G++ + V YD+D+ SRGFGFVTY + E A++ L GR I V A+
Sbjct: 208 FSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEA- 266
Query: 243 KGKPPQTQL 251
+PP+ Q
Sbjct: 267 --RPPRRQF 273
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL W+TT ETL F +GE+ + ++ DK T +SRG+GF+ +K ++ L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 134 PSKLIDGRLAVCNLAC-------------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+DGR + C EG G A + + +K+++GG+ L
Sbjct: 72 KPHNLDGR-NIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPHNCGEPEL 129
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
++F R G + E + YD + RGFGF+T++ ++ +AV+ + G+ + VK A+
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Query: 241 THKGKPPQTQLPAAVVP 257
K P P P
Sbjct: 190 PRDSKAPGQLGPGQWAP 206
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 187
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 188 KEVMFPPGT 196
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 90.9 bits (224), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 70 PVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQS 129
P K++V L ++ SE L F G +E VIY++ +G+SRG+GF+T +E
Sbjct: 102 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 161
Query: 130 ALRAPSKL-IDGRLAVCNLACEGLSGVSAVPD--LAQRKLYIGGLSPEVTTEVLLNFFGR 186
A+ ++ I GRL N A + S V P + + Y+G L + L+ F
Sbjct: 162 AIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSE 221
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVE---AAKKAVDDPHKTLGGRTIIVKLA 239
HGE+ ++ YD++T SRGFGFVT + E +A A+D + + GR + V +A
Sbjct: 222 HGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG--QEMDGRPLRVNVA 275
Score = 59.3 bits (142), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 148 ACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGF 207
A G +G +A P + K+Y+G L +V +E L F + G +E V Y++++ +SRGF
Sbjct: 90 ASGGDAGYTAEPP-EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGF 148
Query: 208 GFVTYKTVEAAKKAVDDPHK-TLGGRTIIVKLADTHKG----KPPQ 248
GFVT T+E A KA++ ++ + GR + V A +G +PP+
Sbjct: 149 GFVTMSTIEEADKAIETFNRYDISGRLLNVNRA-AQRGSRVERPPR 193
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
+ +V L W L F HGE+ ++YD+ TG+SRG+GF+T E SA+ A
Sbjct: 200 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 259
Query: 134 -PSKLIDGRLAVCNLACE 150
+ +DGR N+A E
Sbjct: 260 LDGQEMDGRPLRVNVAAE 277
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 59 AEEIKSVASADPVHR--KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
+++ + AD H K+FV GL+W T+++ L F GE++E ++ D T +SRG+
Sbjct: 5 SQQNATTHDADGNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGF 64
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVT 176
GF+T+ ++ ++ + +D + +A S P +K+++GG++ T
Sbjct: 65 GFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRS--HPKPVSKTKKIFVGGIAASTT 122
Query: 177 TEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIV 236
L FF ++G++EE ++ +D+ TN RGFGFV + + ++ L G+ + V
Sbjct: 123 EPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEV 182
Query: 237 KLA 239
K A
Sbjct: 183 KKA 185
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKL+V + T++ L A F HG + V+YDK +G+SR +GF+T +E +A+
Sbjct: 69 RKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIE 128
Query: 133 APSKL-IDGRLAVCNLACEGLSGVS-AVPD------LAQRKLYIGGLSPEVTTEVLLNFF 184
+ ++ + GR N+ L + + P+ +Q K+Y+G L+ VTTEVL NFF
Sbjct: 129 SLNETEVGGRKIKVNVTESFLPNIDPSAPEPEPAFVDSQYKVYVGNLAKTVTTEVLKNFF 188
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLA 239
GE+ +V+ T +S+G+GFVT+ + E + AV + T L G+ I V A
Sbjct: 189 SEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQPIRVNRA 244
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 160 DLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAK 219
+LA RKLY+G + VT + L F HG + V YDK + SR FGFVT +VE A
Sbjct: 65 ELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEAN 124
Query: 220 KAVDDPHKT-LGGRTIIVKLADT 241
A++ ++T +GGR I V + ++
Sbjct: 125 AAIESLNETEVGGRKIKVNVTES 147
>gi|125588056|gb|EAZ28720.1| hypothetical protein OsJ_12740 [Oryza sativa Japonica Group]
Length = 291
Score = 90.9 bits (224), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/283 (27%), Positives = 117/283 (41%), Gaps = 53/283 (18%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL T L F +GE+ V+ D A+G SRG+GF+ + T A R
Sbjct: 5 RKLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAGTLGA-R 63
Query: 133 A----PSKLIDGRLAVCNLACEGLSGVSAVPDLA-------------QRKLYIGGLSPEV 175
A P + GR A P + Q+K+++GGL V
Sbjct: 64 ANDERPKHVFGGRTVDVKRAERRHDHKQTSPSIKNQNDSVQKNQFIFQKKVFVGGLHETV 123
Query: 176 TTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTII 235
T + L+++F + G I + V ++ TN +RGFGF+++ + EA K + + L GR +
Sbjct: 124 TVKDLISYFEKFGTITDAVVMRNRTTNRARGFGFISFDSHEAVCKILLNRFHNLNGRDVE 183
Query: 236 VKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH----ANTPPVGYSYPQNVPPYP 291
VK+A +P Y +A H + P+ Y Y V +P
Sbjct: 184 VKIA--------------------VPKSPTYSEAKYYHMRMDMSLSPITY-YDGMVHVHP 222
Query: 292 TSSYTSPNTAPVPYPTQP------PISYPPIPLKKDPIGPIGH 328
+ YT P+ + T PI Y GPIGH
Sbjct: 223 YTPYTFGCVTPLAHLTHSGYGYGGPIDYSCYAYG----GPIGH 261
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKT---VEA 217
L +RKL++ GL + L F R+GE+ V D + SRGFGFV +
Sbjct: 2 LEERKLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAGTLG 61
Query: 218 AKKAVDDPHKTLGGRTIIVKLAD---THKGKPPQTQ 250
A+ + P GGRT+ VK A+ HK P +
Sbjct: 62 ARANDERPKHVFGGRTVDVKRAERRHDHKQTSPSIK 97
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 119
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W T+ ++L F GEI E V+ D T +SRG+GF+T+ S L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 134 P-----SKLIDGRLAVCNLACEGLSGVSAVPDLAQR--KLYIGGLSPEVTTEVLLNFFGR 186
P SK ID ++A A P + R K+++GGLS E + +F +
Sbjct: 82 PHHELDSKTIDPKVAFPR---------RAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQ 132
Query: 187 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
G++E+ + +DK TN RGFGFVT++ + +K + + I K+ + K +P
Sbjct: 133 FGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE-----IHFHEINNKMVECKKAQP 187
Query: 247 PQTQLPAAV 255
+ P
Sbjct: 188 KEVMFPPGT 196
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 147 LACEGLSGVSAVPDLAQR---KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNE 203
+ G G S + +Q K++IGGLS + + + L ++F + GEI E V D T
Sbjct: 1 MEANGSQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60
Query: 204 SRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHKGKP 246
SRGFGFVT+ + K + PH L +TI K+A + +P
Sbjct: 61 SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
+K+FV GL+ NT E + F G++E+ +++DK T + RG+GF+T+++ + +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 133 APSKLIDGRLAVCNLA 148
I+ ++ C A
Sbjct: 170 IHFHEINNKMVECKKA 185
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K ES +
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
++G++ A + + V +K+++GGLSP+ E + +FG GE+E
Sbjct: 121 KEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYFGGFGEVESI 174
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 175 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 220
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 165 KLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDD 224
K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K E+ K +D
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 225 PHKTLGGRTIIVKLADTHKGKPP 247
L G+ I K A K K P
Sbjct: 121 KEHKLNGKVIDPKRAKAMKTKEP 143
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 63 KSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYK 122
K++ + +PV +K+FV GL+ +T E + F GE+E + D T K RG+ FIT+K
Sbjct: 136 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFK 194
Query: 123 HME 125
E
Sbjct: 195 EEE 197
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 90 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 149
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 150 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 203
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + D TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 204 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 258
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 90 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 149
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 150 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 181
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 20 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 79
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 80 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 139
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 140 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 186
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 20 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 79
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 80 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGIKEDTEEH 125
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
SI +K+ S D K+F+ GL W TT +TL F +G++ + ++ D TG+SRG+
Sbjct: 143 SITNPVKADLSRDIC--KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGF 200
Query: 117 GFITYKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRK---LYIGGLSP 173
GF+T+ S ++ ++DG++ + A+P Q K +++GG+
Sbjct: 201 GFLTFDEPSSVDEVVKT-QHILDGKV---------IDPKRAIPREEQDKTGKIFVGGIGA 250
Query: 174 EVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRT 233
+V + FF + G I + + DKDT SRGFGFVTY + +A + + G+
Sbjct: 251 DVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKK 310
Query: 234 IIVKLAD 240
I +K A+
Sbjct: 311 IEIKRAE 317
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 90.9 bits (224), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GLA +TT T F +G+I + ++ D+ TG+ RG+GFITY +
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIE- 78
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
+ +I+G+ SG S D +K+++GG+ VT + NFF ++G++ E
Sbjct: 79 DTHVINGKQVEIKRTIPKGSGQSK--DFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEH 136
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKT-LGGRTIIVKLADTHKGKPP 247
+ D +TN SRGFGF+ + + E + + + + G + +K A+ K P
Sbjct: 137 QIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEPKKASNP 191
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 80/167 (47%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL + TT E+L F GE+ + V+ D +T KSRG+GFIT++ A
Sbjct: 14 RKLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQA 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR A +K+++GGL +V L ++F + G I
Sbjct: 74 ARPHKVDGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILS 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
++ +KDT RGF FV Y + K V H L G+ VK A
Sbjct: 134 VNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHMLKGKRTEVKKA 180
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 15/197 (7%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL W+TT ETL F +GE+ + ++ DK T +SRG+GF+ +K ++ L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 134 PSKLIDGRLAVCNLAC-------------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL 180
+DGR + C EG G A + + +K+++GG+ L
Sbjct: 72 KPHNLDGR-NIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPHNCGEPEL 129
Query: 181 LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD 240
++F R G + E + YD + RGFGF+T++ ++ +AV+ + G+ + VK A+
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Query: 241 THKGKPPQTQLPAAVVP 257
K P P P
Sbjct: 190 PRDSKAPGQLGPGQWAP 206
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 16/170 (9%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
K+F+ GL W TT ++L F GE+ E V+ D ATG+SRG+GF+T+K ++ +
Sbjct: 42 KMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVK 101
Query: 134 ----PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGE 189
K+ID + A+ E S K+++GG+S E T + +F + G
Sbjct: 102 EHYLDGKIIDPKRAIPRDEQEKTS-----------KIFVGGVSQETTDQEFKEYFAQFGR 150
Query: 190 IEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ + ++ DKDT RGFGF+T+++ EA +A + G+ I VK A
Sbjct: 151 VVDATLMMDKDTGRPRGFGFLTFES-EAGVEACLSTELEIHGKAIEVKKA 199
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 163 QRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYK 213
Q K++IGGL+ E T + L ++F + GE+ E +V D T SRGFGF+T+K
Sbjct: 40 QGKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFK 90
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 104
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL+W TT + L F G+IE V D TG+SRG+ FI + ES A+
Sbjct: 56 RKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDKAMA 115
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
+I+ + V + G K+++GGLS E++ + + FF + G I +
Sbjct: 116 HGDHIINNK-KVDPKKAKARHG----------KIFVGGLSTELSDDDIKTFFSQFGTIVD 164
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ +DK N+ +GF F+T+++ + A + + +T+ G+ + VK A
Sbjct: 165 VEMPFDKTKNQRKGFCFITFESEQVANELLKTSKQTISGKEVEVKKA 211
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 161 LAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKK 220
L RKL++GGLS E T + L + F G+IE +V D T SRGF F+ + E+ K
Sbjct: 53 LNDRKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDK 112
Query: 221 AVDDPHKTLGGRTIIVKLADTHKGK 245
A+ + + + K A GK
Sbjct: 113 AMAHGDHIINNKKVDPKKAKARHGK 137
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 9 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 68
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L ++F ++G+IE
Sbjct: 69 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 128
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 129 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 175
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 9 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 68
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPV 258
PHK + GR + K A + + +Q P A + V
Sbjct: 69 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTV 99
>gi|417399538|gb|JAA46770.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 354
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 7/175 (4%)
Query: 65 VASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHM 124
A+A K+F+ GL+W+TT + L F GE+ + + D TG+SRG+GF+ +K
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 125 ESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFF 184
ES + ++G++ A + + V +K+++GGLSP+ E + +F
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEPV-----KKIFVGGLSPDTPEEKIREYF 202
Query: 185 GRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
G GE+E + DK TN+ RGF F+T+K E KK ++ + +G +K+A
Sbjct: 203 GGFGEVESIELPMDK-TNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 256
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 156 SAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTV 215
+A + K++IGGLS + T + L ++F + GE+ + ++ D T SRGFGFV +K
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 216 EAAKKAVDDPHKTLGGRTIIVKLADTHKGKPP 247
E+ K +D L G+ I K A K K P
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEP 180
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 74 KLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALRA 133
KLFV GL+W T+SE L F + G I + ++ D T +SRG+GFIT++ S ++ L+
Sbjct: 60 KLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVLKV 119
Query: 134 PSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEG 193
P +DG+ A G + + +K+++GG+S + +++ + +F + G++EE
Sbjct: 120 PVHTLDGKKIDPKHATPKGRGKT---NGKTKKIFVGGVSQDTSSDEVKVYFSQFGKVEEA 176
Query: 194 SVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
+ D+ T RGFGFVT++ E + +
Sbjct: 177 VMLMDQQTKRHRGFGFVTFENEETVDRVCE 206
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 162 AQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKA 221
A KL++GGLS + ++E L +FG G I + + D T SRGFGF+T++ + +
Sbjct: 57 AAGKLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENV 116
Query: 222 VDDPHKTLGGRTIIVKLADTHKGK 245
+ P TL G+ I K A T KG+
Sbjct: 117 LKVPVHTLDGKKIDPKHA-TPKGR 139
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 38/54 (70%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMES 126
+K+FV G++ +T+S+ + F G++EE ++ D+ T + RG+GF+T+++ E+
Sbjct: 147 KKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEET 200
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 90.9 bits (224), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 89/171 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L A F G + + V+ D + +SRG+GF+TY ++ +A+
Sbjct: 14 RKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEVDAAMS 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A + +K+++GG+ + L ++F + G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQFGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLADTHK 243
+ D++T + RGF FVT+ ++ + V + T+ V+ A T +
Sbjct: 134 IDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKALTKQ 184
Score = 40.0 bits (92), Expect = 5.2, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
+++ E + A +K+FV G+ +T L F+ G+IE ++ D+ TGK RG+
Sbjct: 89 AVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGF 148
Query: 117 GFITYKHMES 126
F+T+ +S
Sbjct: 149 AFVTFDDHDS 158
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + F G + + V+ D T +SRG+GF+TY +E +A+
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A +DGR+ A L +K+++GG+ + L + F ++G+IE
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEV 133
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGF FVT+ ++ K V + T+ G V+ A
Sbjct: 134 IEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 180
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 164 RKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVD 223
RKL+IGGLS E T E L + F + G + + V D +T SRGFGFVTY TVE A++
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 224 -DPHKTLGGRTIIVKLADTHKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAH 273
PHK + GR + K A + + +Q P A + V G + + H
Sbjct: 74 ARPHK-VDGRVVEPKRAVSRE----DSQRPGAHLTVKKIFVGGMKEDTEEH 119
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLFV GL W+TT ETL + F +GE+ + ++ DK T +SRG+GF+ +K + L
Sbjct: 48 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 107
Query: 133 APSKLIDGRLAVCNLAC-------------EGLSGVSAVPDLAQRKLYIGGLSPEVTTEV 179
+ +DGR + C EG + K+++GG+
Sbjct: 108 SRPHTLDGR-NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 166
Query: 180 LLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
L +F + G + E + YD + RGFGF+T++ ++ +AV+ + G+ + VK A
Sbjct: 167 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 226
Query: 240 DTHK------GKPPQTQLPAAVVPVPLPLGAGYP 267
+ G+P +Q + VVP AG P
Sbjct: 227 EPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 260
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 157 AVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVE 216
AV +A RKL++GGL T E L ++F ++GE+ + + DK TN+SRGFGFV +K
Sbjct: 41 AVDRIAPRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 100
Query: 217 AAKKAVDDPHKTLGGRTIIVKLADTHKGKPPQTQLP 252
+ TL GR I K T +G P+ P
Sbjct: 101 CVGTVLASRPHTLDGRNIDPKPC-TPRGMQPERTRP 135
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%)
Query: 73 RKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQSALR 132
RKLF+ GL++ TT E+L + G++ + V+ D A+ +SRG+GF+T+ M +A+
Sbjct: 34 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 93
Query: 133 APSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVLLNFFGRHGEIEE 192
A IDGR+ A + +KL++GG+ + L ++F +G+I+
Sbjct: 94 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 153
Query: 193 GSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLA 239
+ D+ + + RGFGFVT+ + K V + T+ G V+ A
Sbjct: 154 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNTEVRKA 200
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 57 SIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGY 116
++A E A +KLFV G+ +T L F +G+I+ +I D+ +GK RG+
Sbjct: 109 AVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGF 168
Query: 117 GFITY 121
GF+T+
Sbjct: 169 GFVTF 173
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,280,046,023
Number of Sequences: 23463169
Number of extensions: 641070722
Number of successful extensions: 2324590
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11175
Number of HSP's successfully gapped in prelim test: 10933
Number of HSP's that attempted gapping in prelim test: 2204555
Number of HSP's gapped (non-prelim): 94935
length of query: 901
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 749
effective length of database: 8,792,793,679
effective search space: 6585802465571
effective search space used: 6585802465571
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)