Query 045708
Match_columns 1196
No_of_seqs 194 out of 242
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 07:53:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045708.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045708hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ro3_A PINS homolog, G-protein 97.1 0.0058 2E-07 58.4 13.1 151 214-381 7-158 (164)
2 3gw4_A Uncharacterized protein 96.8 0.04 1.4E-06 55.5 17.0 155 214-384 24-179 (203)
3 3sf4_A G-protein-signaling mod 96.3 0.056 1.9E-06 60.4 16.0 153 214-383 185-338 (406)
4 1qqe_A Vesicular transport pro 96.2 0.049 1.7E-06 59.8 14.8 141 223-380 44-186 (292)
5 4a1s_A PINS, partner of inscut 96.2 0.036 1.2E-06 62.7 13.7 151 215-382 222-373 (411)
6 3ulq_A Response regulator aspa 96.1 0.12 4.1E-06 58.4 17.5 147 221-383 108-255 (383)
7 4a1s_A PINS, partner of inscut 96.1 0.41 1.4E-05 53.8 21.8 168 214-383 124-294 (411)
8 3sf4_A G-protein-signaling mod 96.0 0.94 3.2E-05 50.3 23.9 166 215-382 86-257 (406)
9 3ro2_A PINS homolog, G-protein 95.9 0.49 1.7E-05 50.5 20.6 151 216-383 43-214 (338)
10 2ifu_A Gamma-SNAP; membrane fu 95.8 0.084 2.9E-06 58.3 14.2 143 222-382 42-185 (307)
11 3q15_A PSP28, response regulat 95.7 0.19 6.4E-06 56.8 17.0 151 217-383 102-253 (378)
12 3ro2_A PINS homolog, G-protein 95.6 0.16 5.4E-06 54.4 15.2 151 215-382 122-293 (338)
13 3edt_B KLC 2, kinesin light ch 95.4 0.14 4.6E-06 53.8 13.3 154 214-382 41-199 (283)
14 3ulq_A Response regulator aspa 95.3 0.31 1.1E-05 54.9 17.1 151 215-382 142-294 (383)
15 2ifu_A Gamma-SNAP; membrane fu 94.9 0.16 5.5E-06 56.0 12.6 110 215-341 75-184 (307)
16 3u3w_A Transcriptional activat 94.9 0.2 6.8E-06 54.6 13.2 150 217-382 116-267 (293)
17 3q15_A PSP28, response regulat 94.7 0.24 8.2E-06 56.0 13.7 150 215-382 140-291 (378)
18 3nf1_A KLC 1, kinesin light ch 94.6 0.42 1.4E-05 50.9 14.7 153 215-382 26-183 (311)
19 2qfc_A PLCR protein; TPR, HTH, 94.5 0.23 7.9E-06 54.1 12.4 147 220-382 119-267 (293)
20 1qqe_A Vesicular transport pro 94.4 0.47 1.6E-05 51.8 14.9 147 216-377 77-224 (292)
21 3nf1_A KLC 1, kinesin light ch 94.1 0.37 1.3E-05 51.4 13.0 154 214-382 67-225 (311)
22 2qsv_A Uncharacterized protein 94.1 0.77 2.6E-05 49.0 15.2 159 574-776 15-185 (220)
23 3gw4_A Uncharacterized protein 93.7 0.48 1.6E-05 47.4 12.1 130 215-361 65-196 (203)
24 3ro3_A PINS homolog, G-protein 93.5 0.6 2.1E-05 44.0 11.9 108 215-339 48-156 (164)
25 3edt_B KLC 2, kinesin light ch 93.2 1.2 4.1E-05 46.3 14.7 111 214-339 83-196 (283)
26 2xzz_A Protein-glutamine gamma 92.8 0.15 5.1E-06 48.2 6.1 64 574-640 16-82 (102)
27 1ex0_A Coagulation factor XIII 91.1 5.6 0.00019 49.4 18.7 161 574-781 527-702 (731)
28 1hz4_A MALT regulatory protein 90.9 3 0.0001 46.3 15.2 152 216-382 53-204 (373)
29 2q3z_A Transglutaminase 2; tra 90.6 8.9 0.0003 47.4 19.8 163 574-781 483-661 (687)
30 4gcn_A Protein STI-1; structur 90.2 1.8 6.1E-05 41.0 10.9 100 220-341 12-112 (127)
31 1vjj_A Protein-glutamine gluta 90.2 4.5 0.00016 49.9 16.7 161 574-781 492-667 (692)
32 4b4t_Q 26S proteasome regulato 90.0 1.7 5.8E-05 49.2 12.3 146 219-380 58-203 (434)
33 4i17_A Hypothetical protein; T 89.8 0.96 3.3E-05 46.6 9.2 132 219-379 10-144 (228)
34 1g0d_A Protein-glutamine gamma 89.4 6.8 0.00023 48.3 17.3 160 576-781 484-658 (695)
35 4gyw_A UDP-N-acetylglucosamine 88.8 2.1 7.2E-05 53.7 12.8 126 220-379 13-138 (723)
36 3rkv_A Putative peptidylprolyl 88.6 1.6 5.4E-05 42.6 9.4 103 216-341 11-126 (162)
37 3but_A Uncharacterized protein 88.4 1.5 5.1E-05 43.5 8.9 52 580-631 20-75 (136)
38 3n71_A Histone lysine methyltr 87.4 2.7 9.3E-05 50.2 12.1 137 227-378 320-461 (490)
39 1g0d_A Protein-glutamine gamma 87.3 1.2 4E-05 55.0 8.7 66 574-640 595-662 (695)
40 4gco_A Protein STI-1; structur 86.7 2.9 9.8E-05 39.6 9.7 94 219-341 16-110 (126)
41 1hz4_A MALT regulatory protein 86.3 9.1 0.00031 42.3 15.1 90 286-379 231-320 (373)
42 2hr2_A Hypothetical protein; a 86.3 3.2 0.00011 42.2 10.2 108 218-341 13-131 (159)
43 1p5q_A FKBP52, FK506-binding p 86.1 5.5 0.00019 44.5 13.2 128 215-371 146-283 (336)
44 2fbn_A 70 kDa peptidylprolyl i 86.0 1.6 5.5E-05 44.2 7.9 107 211-341 33-151 (198)
45 1ihg_A Cyclophilin 40; ppiase 85.9 1.8 6.1E-05 49.5 9.1 105 214-341 221-336 (370)
46 3vtx_A MAMA; tetratricopeptide 85.8 10 0.00035 37.1 13.7 144 221-379 10-168 (184)
47 3uq3_A Heat shock protein STI1 85.8 8.9 0.00031 39.1 13.7 149 216-378 38-199 (258)
48 2qfc_A PLCR protein; TPR, HTH, 84.7 20 0.00068 38.5 16.4 145 222-382 81-226 (293)
49 4gyw_A UDP-N-acetylglucosamine 84.3 4.9 0.00017 50.4 12.7 130 219-382 46-175 (723)
50 2fo7_A Synthetic consensus TPR 84.2 21 0.00072 31.7 14.1 124 221-378 6-129 (136)
51 3isy_A Bsupi, intracellular pr 84.1 0.99 3.4E-05 43.8 4.8 77 1078-1158 16-100 (120)
52 2q3z_A Transglutaminase 2; tra 83.6 1 3.6E-05 55.5 5.9 65 574-640 597-665 (687)
53 1ex0_A Coagulation factor XIII 83.5 3 0.0001 51.7 9.9 64 574-640 640-706 (731)
54 3u3w_A Transcriptional activat 83.3 15 0.00051 39.5 14.6 145 222-382 81-226 (293)
55 3uq3_A Heat shock protein STI1 83.2 15 0.0005 37.5 13.9 140 216-379 5-166 (258)
56 1kt0_A FKBP51, 51 kDa FK506-bi 83.1 5.4 0.00018 46.8 11.7 126 214-368 266-401 (457)
57 2ho1_A Type 4 fimbrial biogene 82.9 15 0.00052 37.6 14.0 29 217-245 38-66 (252)
58 2ho1_A Type 4 fimbrial biogene 82.8 9.9 0.00034 39.0 12.5 61 312-378 175-235 (252)
59 3isy_A Bsupi, intracellular pr 82.4 2.3 8E-05 41.2 6.7 59 715-776 16-88 (120)
60 2vq2_A PILW, putative fimbrial 82.3 18 0.00061 35.9 13.9 132 216-379 8-140 (225)
61 3hym_B Cell division cycle pro 82.0 6.4 0.00022 41.9 11.0 86 286-379 175-263 (330)
62 3as5_A MAMA; tetratricopeptide 81.9 22 0.00077 33.7 14.0 129 218-380 44-172 (186)
63 3idu_A Uncharacterized protein 81.8 3.3 0.00011 40.5 7.6 76 690-776 9-84 (127)
64 1hh8_A P67PHOX, NCF-2, neutrop 81.5 5.7 0.00019 39.9 9.8 128 221-379 11-148 (213)
65 4abn_A Tetratricopeptide repea 81.3 3.7 0.00013 48.3 9.5 82 284-378 193-284 (474)
66 3upv_A Heat shock protein STI1 80.9 5.7 0.00019 36.6 8.8 94 219-341 7-101 (126)
67 1a17_A Serine/threonine protei 80.8 16 0.00054 34.5 12.3 98 215-341 12-110 (166)
68 2if4_A ATFKBP42; FKBP-like, al 80.7 2.4 8.2E-05 47.6 7.2 104 215-341 178-293 (338)
69 2ys4_A Hydrocephalus-inducing 80.4 2.9 0.0001 40.1 6.7 58 713-780 37-94 (122)
70 2q7f_A YRRB protein; TPR, prot 80.1 20 0.00068 36.2 13.5 63 312-380 159-221 (243)
71 2pl2_A Hypothetical conserved 79.8 4.8 0.00016 41.5 8.8 124 220-380 9-146 (217)
72 3idu_A Uncharacterized protein 79.7 6.8 0.00023 38.3 9.1 68 573-642 28-95 (127)
73 3gyz_A Chaperone protein IPGC; 78.6 6.1 0.00021 39.1 8.6 92 220-341 40-133 (151)
74 2pl2_A Hypothetical conserved 78.2 9.9 0.00034 39.1 10.5 137 218-379 41-178 (217)
75 4gcn_A Protein STI-1; structur 77.9 4.2 0.00014 38.4 7.0 63 220-297 46-110 (127)
76 2vq2_A PILW, putative fimbrial 77.5 24 0.00082 34.9 13.0 130 218-379 44-174 (225)
77 1fch_A Peroxisomal targeting s 77.5 9.8 0.00034 41.5 10.8 64 313-376 286-354 (368)
78 2xzz_A Protein-glutamine gamma 77.2 7.8 0.00027 36.4 8.3 73 698-781 6-78 (102)
79 2vyi_A SGTA protein; chaperone 76.9 21 0.00071 31.8 11.2 99 215-341 11-109 (131)
80 4eqf_A PEX5-related protein; a 76.8 14 0.00047 40.5 11.8 31 217-247 134-164 (365)
81 3qky_A Outer membrane assembly 76.6 31 0.0011 36.0 14.1 98 219-341 18-126 (261)
82 1vjj_A Protein-glutamine gluta 76.5 3 0.0001 51.5 6.6 65 574-640 604-671 (692)
83 4b4t_Q 26S proteasome regulato 76.4 44 0.0015 37.4 16.2 153 216-384 95-248 (434)
84 3qww_A SET and MYND domain-con 76.4 13 0.00044 43.7 11.9 98 229-341 311-411 (433)
85 4ga2_A E3 SUMO-protein ligase 76.0 7.8 0.00027 37.6 8.5 91 221-340 36-128 (150)
86 2ys4_A Hydrocephalus-inducing 75.7 7.6 0.00026 37.2 8.1 59 574-636 37-95 (122)
87 3sz7_A HSC70 cochaperone (SGT) 75.6 14 0.00049 35.7 10.3 97 216-341 11-108 (164)
88 2yhc_A BAMD, UPF0169 lipoprote 75.3 25 0.00087 36.1 12.7 146 219-377 44-209 (225)
89 2lni_A Stress-induced-phosphop 75.2 10 0.00034 34.3 8.6 97 217-341 17-113 (133)
90 3qbt_B Inositol polyphosphate 75.1 5 0.00017 39.7 6.8 57 713-776 39-100 (140)
91 2xev_A YBGF; tetratricopeptide 74.7 12 0.00042 34.0 9.1 96 221-340 7-104 (129)
92 3cv0_A Peroxisome targeting si 74.6 14 0.00046 39.3 10.7 135 216-378 172-312 (327)
93 1yyc_A LEA protein, putative l 73.8 3.2 0.00011 42.9 5.1 53 580-632 64-120 (174)
94 3u4t_A TPR repeat-containing p 73.3 18 0.0006 37.5 11.0 125 220-375 7-131 (272)
95 2vgx_A Chaperone SYCD; alterna 72.7 14 0.00047 35.8 9.4 91 220-341 25-118 (148)
96 2q7f_A YRRB protein; TPR, prot 72.7 35 0.0012 34.3 12.9 129 216-378 57-185 (243)
97 3q49_B STIP1 homology and U bo 72.2 22 0.00074 32.6 10.3 96 217-341 10-106 (137)
98 4f3v_A ESX-1 secretion system 72.1 1.9 6.6E-05 47.9 3.2 94 220-340 139-236 (282)
99 4i17_A Hypothetical protein; T 72.0 31 0.001 35.0 12.3 117 221-366 47-167 (228)
100 2e6j_A Hydin protein; PAPD, st 71.4 1.9 6.5E-05 40.4 2.6 62 712-780 21-84 (112)
101 2y4t_A DNAJ homolog subfamily 70.5 51 0.0017 36.9 14.8 120 222-371 263-394 (450)
102 1xo8_A AT1G01470; structural g 70.4 4.1 0.00014 41.0 4.9 52 579-630 40-95 (151)
103 3qky_A Outer membrane assembly 70.1 52 0.0018 34.2 13.9 143 217-379 53-222 (261)
104 3urz_A Uncharacterized protein 69.6 12 0.00039 38.3 8.3 119 222-366 10-136 (208)
105 3hrz_B Cobra venom factor; ser 69.5 11 0.00038 40.9 8.5 68 571-640 89-163 (252)
106 1w3b_A UDP-N-acetylglucosamine 69.3 31 0.0011 38.1 12.5 60 313-378 306-365 (388)
107 1elw_A TPR1-domain of HOP; HOP 69.0 34 0.0011 29.7 10.4 94 219-341 7-101 (118)
108 1fch_A Peroxisomal targeting s 68.4 27 0.00091 37.9 11.5 31 217-247 133-163 (368)
109 3qou_A Protein YBBN; thioredox 68.2 12 0.0004 40.6 8.5 65 312-380 219-283 (287)
110 1hxi_A PEX5, peroxisome target 67.3 21 0.00071 33.2 9.0 93 221-341 22-114 (121)
111 2vsy_A XCC0866; transferase, g 67.1 31 0.0011 40.9 12.7 128 217-378 24-154 (568)
112 4g1t_A Interferon-induced prot 66.8 35 0.0012 38.7 12.5 38 214-251 49-86 (472)
113 1elr_A TPR2A-domain of HOP; HO 66.6 54 0.0018 29.0 11.5 101 219-341 7-108 (131)
114 3ieg_A DNAJ homolog subfamily 66.3 28 0.00096 37.1 11.0 82 286-379 250-333 (359)
115 4ga2_A E3 SUMO-protein ligase 66.2 6.7 0.00023 38.1 5.4 120 222-379 3-127 (150)
116 1w3b_A UDP-N-acetylglucosamine 65.9 40 0.0014 37.1 12.5 150 215-378 66-229 (388)
117 3hym_B Cell division cycle pro 65.7 55 0.0019 34.5 13.1 132 217-382 91-223 (330)
118 2e6j_A Hydin protein; PAPD, st 65.1 13 0.00043 34.7 6.9 75 574-649 22-97 (112)
119 2dba_A Smooth muscle cell asso 64.9 37 0.0013 31.1 10.3 101 215-341 27-128 (148)
120 2xcb_A PCRH, regulatory protei 64.9 21 0.0007 33.8 8.6 90 221-341 23-115 (142)
121 2kck_A TPR repeat; tetratricop 64.7 32 0.0011 29.6 9.3 99 217-341 7-106 (112)
122 1na0_A Designed protein CTPR3; 63.7 62 0.0021 28.2 11.2 96 217-340 10-105 (125)
123 2r5s_A Uncharacterized protein 63.6 22 0.00076 34.9 8.8 135 216-382 40-174 (176)
124 1ouv_A Conserved hypothetical 63.3 50 0.0017 34.4 12.1 126 218-379 8-141 (273)
125 3as5_A MAMA; tetratricopeptide 63.3 36 0.0012 32.2 10.1 129 216-378 8-136 (186)
126 2l0d_A Cell surface protein; s 62.2 36 0.0012 32.6 9.4 68 697-776 2-71 (114)
127 2xpi_A Anaphase-promoting comp 61.9 33 0.0011 40.2 11.4 154 217-379 374-543 (597)
128 1xnf_A Lipoprotein NLPI; TPR, 61.5 31 0.001 35.5 9.9 30 216-245 43-72 (275)
129 1yew_A Particulate methane mon 61.4 20 0.00067 40.8 8.4 74 700-776 250-336 (382)
130 1ouv_A Conserved hypothetical 61.2 45 0.0015 34.8 11.2 126 218-379 40-177 (273)
131 2c2l_A CHIP, carboxy terminus 61.0 30 0.001 37.2 10.0 95 218-341 6-101 (281)
132 3ieg_A DNAJ homolog subfamily 60.8 74 0.0025 33.8 13.1 27 220-246 7-33 (359)
133 3u4t_A TPR repeat-containing p 60.7 61 0.0021 33.3 12.1 116 218-365 39-156 (272)
134 3qis_A Inositol polyphosphate 60.7 23 0.00078 40.6 9.3 57 713-776 42-103 (366)
135 2y4t_A DNAJ homolog subfamily 60.1 85 0.0029 35.0 14.0 62 316-379 261-322 (450)
136 1wao_1 Serine/threonine protei 60.1 16 0.00056 42.9 8.2 97 216-340 6-102 (477)
137 3qwp_A SET and MYND domain-con 60.0 33 0.0011 40.0 10.7 99 228-341 299-400 (429)
138 3hs8_A Adaptor protein complex 58.8 17 0.00057 40.1 7.4 77 713-814 64-142 (273)
139 4eqf_A PEX5-related protein; a 58.6 25 0.00085 38.4 8.9 133 216-382 177-311 (365)
140 3rjv_A Putative SEL1 repeat pr 58.2 72 0.0025 32.4 11.9 135 211-378 13-155 (212)
141 2xpi_A Anaphase-promoting comp 58.0 70 0.0024 37.4 13.3 154 217-380 408-578 (597)
142 3rfr_A PMOB; membrane, oxidore 57.9 14 0.00046 42.4 6.4 73 700-776 284-368 (419)
143 1kyf_A Alpha-adaptin C; protei 57.8 17 0.00057 39.5 7.1 76 714-814 39-116 (247)
144 3n71_A Histone lysine methyltr 57.4 51 0.0017 39.2 11.9 79 215-300 350-430 (490)
145 3cv0_A Peroxisome targeting si 57.3 1E+02 0.0035 32.3 13.3 61 313-379 173-233 (327)
146 2e2e_A Formate-dependent nitri 57.2 81 0.0028 30.4 11.6 103 215-342 43-145 (177)
147 3fp2_A TPR repeat-containing p 57.1 40 0.0014 38.7 10.8 34 215-248 242-275 (537)
148 2l6j_A TPR repeat-containing p 56.5 9.6 0.00033 33.6 4.2 24 222-245 10-33 (111)
149 4abn_A Tetratricopeptide repea 55.3 49 0.0017 38.6 11.2 129 214-378 100-247 (474)
150 1elr_A TPR2A-domain of HOP; HO 53.6 28 0.00094 31.0 6.9 46 218-263 40-86 (131)
151 3ma5_A Tetratricopeptide repea 52.9 12 0.0004 33.5 4.2 31 218-248 9-39 (100)
152 4g1t_A Interferon-induced prot 52.8 1.2E+02 0.0042 34.0 13.9 141 217-371 248-391 (472)
153 1xnf_A Lipoprotein NLPI; TPR, 52.8 54 0.0018 33.6 9.9 58 320-379 185-242 (275)
154 3ffl_A Anaphase-promoting comp 52.4 1E+02 0.0034 31.5 11.2 126 226-363 30-166 (167)
155 2l6j_A TPR repeat-containing p 51.6 26 0.00087 30.7 6.2 47 215-261 37-83 (111)
156 3ma5_A Tetratricopeptide repea 48.4 16 0.00055 32.6 4.3 36 218-253 43-78 (100)
157 3fp2_A TPR repeat-containing p 48.0 51 0.0017 37.8 9.7 50 284-341 442-491 (537)
158 1hh8_A P67PHOX, NCF-2, neutrop 47.8 67 0.0023 31.8 9.4 105 217-341 38-150 (213)
159 3vtx_A MAMA; tetratricopeptide 47.6 65 0.0022 31.2 9.1 48 286-341 123-170 (184)
160 2vsy_A XCC0866; transferase, g 46.8 68 0.0023 38.0 10.7 118 228-379 1-118 (568)
161 1row_A SSP-19, MSP-domain prot 46.5 1.3E+02 0.0044 28.4 10.4 49 720-776 18-66 (109)
162 2gw1_A Mitochondrial precursor 46.4 42 0.0014 38.1 8.6 66 313-378 373-441 (514)
163 2ds4_A Tripartite motif protei 45.4 57 0.0019 30.2 7.8 47 1130-1195 66-112 (113)
164 2pzi_A Probable serine/threoni 45.1 89 0.003 38.4 11.7 136 217-367 434-583 (681)
165 3txn_A 26S proteasome regulato 44.6 42 0.0014 38.9 8.0 145 209-370 90-240 (394)
166 3hrz_B Cobra venom factor; ser 44.3 36 0.0012 36.9 7.0 79 1074-1161 90-168 (252)
167 1b89_A Protein (clathrin heavy 43.1 25 0.00084 41.5 5.8 116 218-368 124-257 (449)
168 2ond_A Cleavage stimulation fa 42.5 1.4E+02 0.0048 32.0 11.6 84 286-379 185-268 (308)
169 2x3c_A Toxic extracellular end 42.4 13 0.00046 42.2 3.4 104 1082-1195 38-154 (343)
170 3qww_A SET and MYND domain-con 42.3 59 0.002 38.0 9.0 77 216-299 340-418 (433)
171 2gw1_A Mitochondrial precursor 41.5 68 0.0023 36.3 9.3 48 286-341 431-478 (514)
172 3prx_B Cobra venom factor; imm 40.3 53 0.0018 45.0 9.2 67 571-639 821-894 (1642)
173 1a17_A Serine/threonine protei 39.8 1E+02 0.0036 28.6 9.0 32 216-247 47-78 (166)
174 2h6f_A Protein farnesyltransfe 39.7 1E+02 0.0035 35.0 10.4 36 219-255 100-135 (382)
175 3ugu_A S-arrestin; arrestin fo 39.2 41 0.0014 38.6 6.6 65 712-776 223-292 (380)
176 2fo7_A Synthetic consensus TPR 38.8 1.7E+02 0.006 25.3 9.9 93 219-339 38-130 (136)
177 2hr2_A Hypothetical protein; a 38.4 47 0.0016 33.5 6.3 27 219-245 60-86 (159)
178 1xi4_A Clathrin heavy chain; a 38.1 98 0.0033 41.8 10.6 33 221-260 1200-1232(1630)
179 2ond_A Cleavage stimulation fa 38.1 1.6E+02 0.0055 31.5 11.2 116 230-378 78-195 (308)
180 3qwp_A SET and MYND domain-con 38.0 83 0.0028 36.6 9.3 78 215-299 328-407 (429)
181 2xev_A YBGF; tetratricopeptide 37.6 63 0.0021 29.0 6.7 29 218-246 41-69 (129)
182 2hr0_B Complement C3 alpha' ch 37.4 65 0.0022 41.4 8.9 67 571-639 88-162 (915)
183 4fxk_B Complement C4-A alpha c 37.4 39 0.0013 42.4 6.8 69 571-640 161-233 (767)
184 3mkr_A Coatomer subunit epsilo 36.8 90 0.0031 33.6 8.9 27 218-244 67-93 (291)
185 2pzi_A Probable serine/threoni 36.6 25 0.00085 43.3 4.8 74 286-376 483-558 (681)
186 2v5f_A Prolyl 4-hydroxylase su 35.9 33 0.0011 31.1 4.4 30 221-250 10-39 (104)
187 2l0d_A Cell surface protein; s 35.6 77 0.0026 30.2 7.0 66 574-641 15-82 (114)
188 2x3c_A Toxic extracellular end 34.8 25 0.00087 40.0 4.1 61 716-776 35-111 (343)
189 3mkr_A Coatomer subunit epsilo 34.6 3E+02 0.01 29.4 12.7 119 219-371 133-253 (291)
190 3k9i_A BH0479 protein; putativ 34.0 30 0.001 31.3 3.8 45 216-260 27-72 (117)
191 3k9i_A BH0479 protein; putativ 32.8 1E+02 0.0035 27.6 7.3 17 229-245 3-19 (117)
192 2kc7_A BFR218_protein; tetratr 32.6 33 0.0011 29.7 3.7 25 222-246 6-30 (99)
193 2kc7_A BFR218_protein; tetratr 32.3 50 0.0017 28.5 4.9 30 218-247 37-66 (99)
194 1suj_A CONE arrestin; sensory 32.0 76 0.0026 36.7 7.4 64 712-775 204-272 (392)
195 3qou_A Protein YBBN; thioredox 29.6 3.1E+02 0.011 29.1 11.7 125 220-378 121-245 (287)
196 2lni_A Stress-induced-phosphop 29.6 50 0.0017 29.4 4.5 26 220-245 54-79 (133)
197 2kat_A Uncharacterized protein 29.3 45 0.0015 29.9 4.1 29 218-246 21-49 (115)
198 1p5q_A FKBP52, FK506-binding p 29.2 1.3E+02 0.0044 33.1 8.7 32 215-246 195-226 (336)
199 2kat_A Uncharacterized protein 29.1 1.4E+02 0.0047 26.5 7.5 37 215-251 52-88 (115)
200 2pn5_A TEP1R, thioester-contai 28.9 1E+02 0.0034 41.3 9.0 69 571-640 673-750 (1325)
201 1m1s_A WR4; structural genomic 28.6 1.2E+02 0.004 29.1 6.9 49 720-776 26-74 (116)
202 2xm6_A Protein corresponding t 28.0 1.7E+02 0.0059 33.6 9.9 76 285-378 346-429 (490)
203 2xsk_A CSGC; chaperone; 1.70A 27.9 90 0.0031 29.2 5.6 55 583-637 22-79 (110)
204 4acq_A Alpha-2-macroglobulin; 27.6 1E+02 0.0035 41.7 8.6 68 571-639 776-847 (1451)
205 1na3_A Designed protein CTPR2; 27.2 44 0.0015 27.9 3.5 25 221-245 48-72 (91)
206 2yhc_A BAMD, UPF0169 lipoprote 26.4 5E+02 0.017 26.0 15.0 26 222-247 10-35 (225)
207 4b4t_P 26S proteasome regulato 26.0 4.9E+02 0.017 30.1 13.2 149 230-379 30-204 (445)
208 1na3_A Designed protein CTPR2; 25.5 48 0.0017 27.6 3.4 29 218-246 11-39 (91)
209 4gco_A Protein STI-1; structur 25.2 41 0.0014 31.4 3.1 27 219-245 50-76 (126)
210 4b4t_R RPN7, 26S proteasome re 25.1 3.1E+02 0.01 31.6 11.2 126 217-370 132-264 (429)
211 1z9l_A Vesicle-associated memb 25.0 98 0.0034 29.7 5.8 53 716-776 26-78 (128)
212 2kck_A TPR repeat; tetratricop 24.7 36 0.0012 29.3 2.5 30 218-247 42-71 (112)
213 2xcb_A PCRH, regulatory protei 24.5 76 0.0026 29.7 4.9 42 219-260 55-97 (142)
214 1msp_A MSP, major sperm protei 23.8 1.5E+02 0.0052 28.4 6.9 72 718-816 26-97 (126)
215 2h6f_A Protein farnesyltransfe 23.8 2.4E+02 0.0083 31.9 9.9 117 219-371 134-254 (382)
216 3upv_A Heat shock protein STI1 23.7 1.7E+02 0.0057 26.2 7.1 30 217-246 39-68 (126)
217 1zu2_A Mitochondrial import re 23.7 69 0.0024 32.3 4.6 56 232-297 62-118 (158)
218 3q49_B STIP1 homology and U bo 23.6 1.5E+02 0.0053 26.6 6.8 31 217-247 44-74 (137)
219 4a5x_A MITD1, MIT domain-conta 22.7 47 0.0016 30.1 2.8 21 227-247 27-47 (86)
220 2b39_A C3; thioester, immune d 22.4 1.4E+02 0.0049 40.9 8.7 68 571-640 835-910 (1661)
221 2xm6_A Protein corresponding t 21.8 6E+02 0.02 28.9 12.9 31 214-244 145-179 (490)
222 1so9_A Cytochrome C oxidase as 21.7 1E+02 0.0035 31.3 5.3 63 708-781 53-126 (164)
223 2vgx_A Chaperone SYCD; alterna 21.7 94 0.0032 29.7 5.0 41 220-260 59-100 (148)
224 1klx_A Cysteine rich protein B 21.7 1.8E+02 0.0063 27.3 7.1 91 222-341 31-126 (138)
225 3es6_B Prolactin-inducible pro 21.3 1.3E+02 0.0046 28.7 5.8 78 1075-1167 17-94 (118)
226 3ugu_A S-arrestin; arrestin fo 21.0 1.4E+02 0.0049 34.2 6.9 65 1076-1146 224-291 (380)
227 2w2u_A Hypothetical P60 katani 20.8 54 0.0019 29.5 2.8 21 227-247 30-50 (83)
228 3sz7_A HSC70 cochaperone (SGT) 20.5 1E+02 0.0035 29.4 5.0 43 218-260 47-90 (164)
229 3bee_A Putative YFRE protein; 20.1 57 0.002 29.3 2.8 46 214-262 41-86 (93)
230 2v6y_A AAA family ATPase, P60 20.0 58 0.002 29.2 2.8 20 228-247 23-42 (83)
No 1
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.07 E-value=0.0058 Score=58.38 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=107.1
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
..++....+|..+...|+|.+|+..|.+|+...+..+|..+.+.++-.++ +......+ ++....+.+++.+
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~A~~~~~~a~~~ 78 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEF--------ETASEYYKKTLLL 78 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHH
Confidence 45667778999999999999999999999999999999888888777664 32222221 3445567777777
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHH
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAA 372 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~A 372 (1196)
+.+... + .....+...++..+...+...++.+.+.+++......-+.......+..+|.+|...|=..++.
T Consensus 79 ~~~~~~--------~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 149 (164)
T 3ro3_A 79 ARQLKD--------R-AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM 149 (164)
T ss_dssp HHHTTC--------H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHhCC--------c-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHH
Confidence 776531 1 1224667777888877777778888777766442222334566778888888888888877777
Q ss_pred HHHHHHHHH
Q 045708 373 FFSRQVAQL 381 (1196)
Q Consensus 373 F~lR~l~~~ 381 (1196)
-+++.+...
T Consensus 150 ~~~~~a~~~ 158 (164)
T 3ro3_A 150 HFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776665443
No 2
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.75 E-value=0.04 Score=55.46 Aligned_cols=155 Identities=9% Similarity=-0.048 Sum_probs=113.7
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHH-HhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCA-LLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~-llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
..++....+|.+++..|+|.+|+.+|.+|+.+++..+|..+.+.++-.++.+ .....+ ++....+.+++.+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~A~~~~~~al~~ 95 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW--------DAARRCFLEEREL 95 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHH
Confidence 3466777899999999999999999999999999999999998888777533 322221 3455567888888
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHH
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAA 372 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~A 372 (1196)
+.+... + + .....+...++..+...+...++.+.+.++.......-+.......+..++.+|...|=..++.
T Consensus 96 ~~~~~~--~-----~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 167 (203)
T 3gw4_A 96 LASLPE--D-----P-LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQ 167 (203)
T ss_dssp HHHSCC--C-----H-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcCc--c-----H-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 876531 1 1 1224566777887777777777887777776442223344566788899999999999999988
Q ss_pred HHHHHHHHHHHh
Q 045708 373 FFSRQVAQLYLQ 384 (1196)
Q Consensus 373 F~lR~l~~~lv~ 384 (1196)
-+++++....-+
T Consensus 168 ~~~~~al~~~~~ 179 (203)
T 3gw4_A 168 QHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887765533
No 3
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.30 E-value=0.056 Score=60.36 Aligned_cols=153 Identities=15% Similarity=0.084 Sum_probs=114.2
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
..++....+|.+++..|+|.+|+..|.+|+.+.....|..+.+.++-.++ +......+ ++....+.+++.+
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~al~~ 256 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF--------ETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh--------HHHHHHHHHHHHH
Confidence 34556778899999999999999999999999999999988888888775 33322221 3444557777777
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHH
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAA 372 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~A 372 (1196)
+.+... .....++...++..+...+...++.+.+.++.......-+......++..+|.+|...|=..++.
T Consensus 257 ~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 327 (406)
T 3sf4_A 257 ARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAM 327 (406)
T ss_dssp HHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHhCcC---------chHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 766421 11235677788888888888888888888776553333344667889999999999999999988
Q ss_pred HHHHHHHHHHH
Q 045708 373 FFSRQVAQLYL 383 (1196)
Q Consensus 373 F~lR~l~~~lv 383 (1196)
-+++.++...-
T Consensus 328 ~~~~~al~~~~ 338 (406)
T 3sf4_A 328 HFAEKHLEISR 338 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888776553
No 4
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.24 E-value=0.049 Score=59.80 Aligned_cols=141 Identities=9% Similarity=-0.060 Sum_probs=104.0
Q ss_pred hhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCC
Q 045708 223 GDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDN 301 (1196)
Q Consensus 223 GDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n 301 (1196)
|.+|...|+|.+|+..|..|+++.+..+|....+.++..+. +..-+..+ ++....+..|+.+|.+...
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~--------~~A~~~~~~Al~l~~~~g~--- 112 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNS--------VNAVDSLENAIQIFTHRGQ--- 112 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCH--------HHHHHHHHHHHHHHHHcCC---
Confidence 88999999999999999999999999999988888988875 33222221 3555678888888877541
Q ss_pred CCCCCCchhhHHHHHHHHHHHhhc-cchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHH
Q 045708 302 AQRVSPLSFELEATLKLARFLCRR-ELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 302 ~e~~p~l~~~~Ea~Lr~a~~L~~~-~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
..-..++...++..+... +...++.+.+.+++......-+......++..++.+|..+|=..++.-+.+.++.
T Consensus 113 ------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 113 ------FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp ------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 112246777888888886 8888898888888754222222233467788999999999988888877776554
No 5
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.18 E-value=0.036 Score=62.67 Aligned_cols=151 Identities=16% Similarity=0.075 Sum_probs=112.0
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
.+.....+|.+++..|+|.+|+..|.+|+.+.+...|..+.+.++-.++ +......+ ++....+.+++.++
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQF--------EDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCH--------HHHHHHHHHHHHHH
Confidence 3456677999999999999999999999999999999888888877765 32222221 34455577777777
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHH
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAF 373 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF 373 (1196)
.+... .....++...++.++...+...++.+.+.++.......-+......++..+|.+|...|-..++.-
T Consensus 294 ~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 364 (411)
T 4a1s_A 294 VELGE---------REVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALK 364 (411)
T ss_dssp HHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHcCC---------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 66421 112357778888888888888888888887765432223345677899999999999999999888
Q ss_pred HHHHHHHHH
Q 045708 374 FSRQVAQLY 382 (1196)
Q Consensus 374 ~lR~l~~~l 382 (1196)
+++.++...
T Consensus 365 ~~~~al~~~ 373 (411)
T 4a1s_A 365 YAEQHLQLA 373 (411)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 888766544
No 6
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.08 E-value=0.12 Score=58.38 Aligned_cols=147 Identities=10% Similarity=-0.083 Sum_probs=111.7
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCC
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIP 299 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p 299 (1196)
.+|.+++..|+|.+|+.+|..|+.+++..+|..+.|.++-.++ +...+... ++....+.+|+.++.+...
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~--------~~A~~~~~~al~~~~~~~~- 178 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQT--------YFSMDYARQAYEIYKEHEA- 178 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHTCST-
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHHHHhCcc-
Confidence 4799999999999999999999999999999999999888775 33333221 3455568888888887531
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 300 DNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 300 ~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
. ..-...+...++..+...+...++.+.+.+++......-+......++..++.+|..+|-..++.-+++.++
T Consensus 179 -~------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 179 -Y------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp -T------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -c------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 0 011246777788888888888888888888776533333445677899999999999999999999989887
Q ss_pred HHHH
Q 045708 380 QLYL 383 (1196)
Q Consensus 380 ~~lv 383 (1196)
...-
T Consensus 252 ~~~~ 255 (383)
T 3ulq_A 252 AVFE 255 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 7
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.06 E-value=0.41 Score=53.84 Aligned_cols=168 Identities=14% Similarity=0.031 Sum_probs=101.7
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhcc--CCCchhhHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRM--GQKDAVLEEEVKFRYNSVI 290 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~--~~~~~~~~~ei~~~~~~ai 290 (1196)
...+....+|.+|+..|+|.+|+..|.+|+...+..+|.-..+.++-.++ +....... .........+....+.+|+
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~ 203 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAV 203 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHH
Confidence 34556667888888888888888888888888888888777777777664 33222210 0000000012222244444
Q ss_pred HHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhh
Q 045708 291 LHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRK 370 (1196)
Q Consensus 291 ~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK 370 (1196)
..|.++.. -......-.....+...++..+...+...++.+.+.+++......-+......++..++.+|...|-..+
T Consensus 204 ~~~~~al~--~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 281 (411)
T 4a1s_A 204 EFYQENLK--LMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFED 281 (411)
T ss_dssp HHHHHHHH--HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHH--HHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHH
Confidence 44444310 0000000012245677778888777777788888777765422223345567789999999999999888
Q ss_pred HHHHHHHHHHHHH
Q 045708 371 AAFFSRQVAQLYL 383 (1196)
Q Consensus 371 ~AF~lR~l~~~lv 383 (1196)
+.-+++.++....
T Consensus 282 A~~~~~~al~~~~ 294 (411)
T 4a1s_A 282 AAEHYKRTLALAV 294 (411)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888877765553
No 8
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=95.96 E-value=0.94 Score=50.25 Aligned_cols=166 Identities=16% Similarity=0.030 Sum_probs=106.0
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCC-----CchhhHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQ-----KDAVLEEEVKFRYNS 288 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~-----~~~~~~~ei~~~~~~ 288 (1196)
..+....+|..+...|++.+|+..|..|+.+.+..+|....+.++-.++ +........+ .......+....+.+
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~ 165 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQA 165 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHH
Confidence 3556667899999999999999999999999998888888777777765 3333322000 000011223333455
Q ss_pred HHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCch
Q 045708 289 VILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQ 368 (1196)
Q Consensus 289 ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~ 368 (1196)
|+..|.++.. -...........++...++.++...+...++.+.+.+++......-+......++..+|.+|...|-.
T Consensus 166 A~~~~~~al~--~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 243 (406)
T 3sf4_A 166 AVDFYEENLS--LVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF 243 (406)
T ss_dssp HHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHH--HHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 5555544321 00000001123467777888888778788888888777654333334456778999999999999998
Q ss_pred hhHHHHHHHHHHHH
Q 045708 369 RKAAFFSRQVAQLY 382 (1196)
Q Consensus 369 RK~AF~lR~l~~~l 382 (1196)
.++.-+++.+....
T Consensus 244 ~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 244 ETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888776554
No 9
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.93 E-value=0.49 Score=50.49 Aligned_cols=151 Identities=15% Similarity=0.013 Sum_probs=105.0
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
++....+|..++..|+|.+|+..|..|+...+..+|..+.+.++-.++ +......+ ++....+.+++.++.
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 43 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNF--------DEAIVCCQRHLDISR 114 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCH--------HHHHHHHHHHHHHHH
Confidence 456778999999999999999999999999999999998888888775 33322221 344455677777776
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccc--------------------hHHHHHHHHhhccCCCCCCCHHHHHHH
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRREL--------------------AKDVVELLTSAADGAKSLIDASDRLIL 354 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~--------------------~~ei~~~L~~a~~~~~~ll~~~dqi~i 354 (1196)
+... ......+...++.++...+. ..++.+.+.++.......-+......+
T Consensus 115 ~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 185 (338)
T 3ro2_A 115 ELND---------KVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRA 185 (338)
T ss_dssp HTTC---------HHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HhcC---------chHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 6421 11224566667776665555 566666666554332222234566788
Q ss_pred HHHHHHHhccCCchhhHHHHHHHHHHHHH
Q 045708 355 YIEIARLFGTLDYQRKAAFFSRQVAQLYL 383 (1196)
Q Consensus 355 ~~~lA~vy~~LGf~RK~AF~lR~l~~~lv 383 (1196)
+..++.+|...|-..++.-+++.+.....
T Consensus 186 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 186 FGNLGNTHYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99999999999998888888887665543
No 10
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=95.81 E-value=0.084 Score=58.33 Aligned_cols=143 Identities=17% Similarity=0.031 Sum_probs=105.0
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCC
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPD 300 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~ 300 (1196)
.|.+|...|+|.+|+..|..|+++.+..+|....+.++..++ +..-+..+ ++....+.+|+.+|.+...+
T Consensus 42 a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~--------~~A~~~~~~Al~l~~~~g~~- 112 (307)
T 2ifu_A 42 AAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRM--------PEAVQYIEKASVMYVENGTP- 112 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG--------GGGHHHHHHHHHHHHTTTCH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCH--------HHHHHHHHHHHHHHHHcCCH-
Confidence 478999999999999999999999999999888888888775 33333222 24456688899998875421
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHH
Q 045708 301 NAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 301 n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
.-...+...++..+.. +...++.+.+.+++......-+......++..++.+|..+|=..++.-+.+.++.
T Consensus 113 --------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 113 --------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKS 183 (307)
T ss_dssp --------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1124677788888877 7778888888887654222222344567888999999999988888888777765
Q ss_pred HH
Q 045708 381 LY 382 (1196)
Q Consensus 381 ~l 382 (1196)
..
T Consensus 184 ~~ 185 (307)
T 2ifu_A 184 MY 185 (307)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 11
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=95.72 E-value=0.19 Score=56.85 Aligned_cols=151 Identities=12% Similarity=-0.004 Sum_probs=112.3
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
+..-.+|.+++..|+|.+|+.+|..|+.+++..+|....|.++-.++ +...+... .+....+.+|+.++.+
T Consensus 102 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~--------~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 102 YSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQT--------HVSMYHILQALDIYQN 173 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCc--------HHHHHHHHHHHHHHHh
Confidence 34556799999999999999999999999999999998888888775 33333221 3445668888888887
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
... . . .-.+.|...++..+...+...++.+.+.+++......-+......++..++.+|...|-..++.-++
T Consensus 174 ~~~------~-~-~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~ 245 (378)
T 3q15_A 174 HPL------Y-S-IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHF 245 (378)
T ss_dssp STT------C-H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCC------c-h-hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 531 0 0 1124677778888888888888888888876653223334567788999999999999999998888
Q ss_pred HHHHHHHH
Q 045708 376 RQVAQLYL 383 (1196)
Q Consensus 376 R~l~~~lv 383 (1196)
..++...-
T Consensus 246 ~~al~~~~ 253 (378)
T 3q15_A 246 QKAAKVSR 253 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776553
No 12
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.63 E-value=0.16 Score=54.45 Aligned_cols=151 Identities=15% Similarity=0.028 Sum_probs=110.7
Q ss_pred cccceeeehhHhhhcCC--------------------hHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCC
Q 045708 215 LARAQKTIGDYCLLAGS--------------------PVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQ 273 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~--------------------~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~ 273 (1196)
..+....+|.++...|+ +.+|+..|.+|+...+..+|..+.+.++-.++ +......+
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 199 (338)
T 3ro2_A 122 EARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNF-- 199 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH--
T ss_pred HHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH--
Confidence 35577789999999999 99999999999999999999888888887775 33322221
Q ss_pred CchhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHH
Q 045708 274 KDAVLEEEVKFRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLI 353 (1196)
Q Consensus 274 ~~~~~~~ei~~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~ 353 (1196)
++....+.+++.++.+... ......+...++..+...+...++.+.+.++.......-+......
T Consensus 200 ------~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 264 (338)
T 3ro2_A 200 ------RDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 264 (338)
T ss_dssp ------HHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 3444557777777766421 1123457777888888888788888888777654322333456788
Q ss_pred HHHHHHHHhccCCchhhHHHHHHHHHHHH
Q 045708 354 LYIEIARLFGTLDYQRKAAFFSRQVAQLY 382 (1196)
Q Consensus 354 i~~~lA~vy~~LGf~RK~AF~lR~l~~~l 382 (1196)
.+..+|.+|...|-..++.-+++.+....
T Consensus 265 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 293 (338)
T 3ro2_A 265 SCYSLGNTYTLLQDYEKAIDYHLKHLAIA 293 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99999999999999999888888876655
No 13
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.38 E-value=0.14 Score=53.75 Aligned_cols=154 Identities=12% Similarity=-0.044 Sum_probs=110.4
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccC--CchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLT--ADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVI 290 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~--~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai 290 (1196)
..++....+|..++..|+|.+|+..|.+|+...+.. .|.-+.+.++-.++ +......+ ++....+.+++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~A~~~~~~al 112 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKY--------KEAEPLCKRAL 112 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHH
Confidence 346677789999999999999999999999998776 77777777777765 33222221 34555677888
Q ss_pred HHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCC--CCCHHHHHHHHHHHHHHhccCCch
Q 045708 291 LHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKS--LIDASDRLILYIEIARLFGTLDYQ 368 (1196)
Q Consensus 291 ~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~--ll~~~dqi~i~~~lA~vy~~LGf~ 368 (1196)
.++.+...+.+ + -..++...++.++...+...++.+.+.+++..... .-+..+...++..+|.+|...|-.
T Consensus 113 ~~~~~~~~~~~-----~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 113 EIREKVLGKFH-----P--DVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHHCTTC-----H--HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHcCCCC-----h--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 88776542211 1 23577888888888888777887777776543110 111245678899999999999999
Q ss_pred hhHHHHHHHHHHHH
Q 045708 369 RKAAFFSRQVAQLY 382 (1196)
Q Consensus 369 RK~AF~lR~l~~~l 382 (1196)
.++.-+++.+....
T Consensus 186 ~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 186 QDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988888876654
No 14
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=95.35 E-value=0.31 Score=54.92 Aligned_cols=151 Identities=8% Similarity=-0.078 Sum_probs=110.4
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc-hhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTAD-YFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D-~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
.++..-.+|.++...|++..|+.+|..|+.+++..+| ....+.++-.++ +..-+..+ ++....+.+|+.+
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~--------~~A~~~~~~al~~ 213 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQY--------EDAISHFQKAYSM 213 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHH
Confidence 5667778999999999999999999999999999988 666777777664 33333222 3455567777777
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHH
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAA 372 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~A 372 (1196)
+.+... -.....+...++..+...+...++.+.+.+++.......+......++..+|.+|..+|=..++.
T Consensus 214 ~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 284 (383)
T 3ulq_A 214 AEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAH 284 (383)
T ss_dssp HHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHH
Confidence 776531 01224566778888888888888888888877642222221345888999999999999999998
Q ss_pred HHHHHHHHHH
Q 045708 373 FFSRQVAQLY 382 (1196)
Q Consensus 373 F~lR~l~~~l 382 (1196)
-+++.+....
T Consensus 285 ~~~~~al~~~ 294 (383)
T 3ulq_A 285 EYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876655
No 15
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=94.90 E-value=0.16 Score=56.03 Aligned_cols=110 Identities=15% Similarity=-0.022 Sum_probs=80.4
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
.++....+|.+|...|+|.+|+.+|..|+++.+..+|.-..+.++-.++.+.. . + + .++....+.+|+.++.
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~--~-g--~---~~~A~~~~~~Al~~~~ 146 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME--P-L--D---LSKAVHLYQQAAAVFE 146 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT--T-T--C---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH--c-C--C---HHHHHHHHHHHHHHHH
Confidence 34455667899999999999999999999999999998888888877653221 1 2 1 1344556777777776
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
+... .....++...++.++...+...++.+.+.+++..
T Consensus 147 ~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 147 NEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6421 1123578888999999888888888888877643
No 16
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.88 E-value=0.2 Score=54.65 Aligned_cols=150 Identities=9% Similarity=-0.012 Sum_probs=101.4
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
...+.+|.+++..|.+.+|+.+|..|+......+|+...+.++=.++ +..-+..+ ++....+..|+..+.+
T Consensus 116 ~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~--------~~A~~~~~~al~~~~~ 187 (293)
T 3u3w_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYL--------KKGIDLFEQILKQLEA 187 (293)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHHHHh
Confidence 34456899999999999999999999998888888765555555543 22222111 3444557777777766
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCC-chhhHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLD-YQRKAAFF 374 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LG-f~RK~AF~ 374 (1196)
... + -...+.+..-++.++...+...++.+.+.+++......-+......+|..++.+|..+| ..-|+.-+
T Consensus 188 ~~~--~------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~ 259 (293)
T 3u3w_A 188 LHD--N------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDA 259 (293)
T ss_dssp SSC--C------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred ccc--c------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 421 1 11234567778888888888888988888877552222122346788999999999999 54666666
Q ss_pred HHHHHHHH
Q 045708 375 SRQVAQLY 382 (1196)
Q Consensus 375 lR~l~~~l 382 (1196)
.+.+....
T Consensus 260 ~~~Al~i~ 267 (293)
T 3u3w_A 260 YKKASFFF 267 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665544
No 17
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=94.70 E-value=0.24 Score=55.98 Aligned_cols=150 Identities=11% Similarity=-0.062 Sum_probs=107.9
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc-hhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTAD-YFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D-~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
.++..-.+|.+|...|++..|+.+|..|+++.+...| ....+.++-.++ +..-+..+ ++....+.+|+.+
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~--------~~A~~~~~~al~~ 211 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHY--------DKALPHLEAALEL 211 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHH
Confidence 4556677899999999999999999999999999887 456777776664 33333222 3445567778887
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHH
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAA 372 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~A 372 (1196)
+.+... . .....+...++..+...+...++.+.+.+++.......++.. ...+..+|.+|...|=..++.
T Consensus 212 ~~~~~~--------~-~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~ 281 (378)
T 3q15_A 212 AMDIQN--------D-RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAF 281 (378)
T ss_dssp HHHTTC--------H-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcCC--------H-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHH
Confidence 776531 1 123456777888888888888888888887653211122233 788999999999999999998
Q ss_pred HHHHHHHHHH
Q 045708 373 FFSRQVAQLY 382 (1196)
Q Consensus 373 F~lR~l~~~l 382 (1196)
-+++.+....
T Consensus 282 ~~~~~al~~~ 291 (378)
T 3q15_A 282 QFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 8888876544
No 18
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.60 E-value=0.42 Score=50.94 Aligned_cols=153 Identities=16% Similarity=0.059 Sum_probs=107.8
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCC--chhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTA--DYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVIL 291 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~--D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~ 291 (1196)
..+....+|..++..|+|.+|+..|.+|+.+++... |....+.++-.++ +......+ ++....+.+++.
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~al~ 97 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKY--------KDAANLLNDALA 97 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCH--------HHHHHHHHHHHH
Confidence 345667799999999999999999999999988765 6677777777665 32222221 344556777888
Q ss_pred HHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCC--CCHHHHHHHHHHHHHHhccCCchh
Q 045708 292 HYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSL--IDASDRLILYIEIARLFGTLDYQR 369 (1196)
Q Consensus 292 lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~l--l~~~dqi~i~~~lA~vy~~LGf~R 369 (1196)
++.+...+.+ + ...++...++..+...+...++.+.+.++....... -+..+...++..+|.+|...|-..
T Consensus 98 ~~~~~~~~~~-----~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 170 (311)
T 3nf1_A 98 IREKTLGKDH-----P--AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYE 170 (311)
T ss_dssp HHHHHHCTTC-----H--HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHhCCCC-----h--HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHH
Confidence 7766521111 1 235777888888888777777877777765431110 112466788999999999999999
Q ss_pred hHHHHHHHHHHHH
Q 045708 370 KAAFFSRQVAQLY 382 (1196)
Q Consensus 370 K~AF~lR~l~~~l 382 (1196)
++.-+++.+...+
T Consensus 171 ~A~~~~~~a~~~~ 183 (311)
T 3nf1_A 171 EVEYYYQRALEIY 183 (311)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888876654
No 19
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.45 E-value=0.23 Score=54.11 Aligned_cols=147 Identities=10% Similarity=0.034 Sum_probs=99.1
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHH-HHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVC-ALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~-~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
..+|.+++..|+|.+|+..|..|+.......|....+.++-.++. ..-...+ ++....+.+|+..+.+..
T Consensus 119 ~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~--------~~A~~~~~kal~~~~~~~- 189 (293)
T 2qfc_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYL--------KKGIDLFEQILKQLEALH- 189 (293)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHSC-
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHHHHhcC-
Confidence 348999999999999999999999988877776655666665542 2222111 244455677777666542
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhH-HHHHHH
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKA-AFFSRQ 377 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~-AF~lR~ 377 (1196)
.+ . ...+.+..-++..+...+...++.+.+.+++......-+......+|..++.+|..+|-..++ ..+++.
T Consensus 190 -~~-----~-~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 190 -DN-----E-EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp -CC-----H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -cc-----c-cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 11 0 122356667788888888888898888887654211111123577899999999999998888 666777
Q ss_pred HHHHH
Q 045708 378 VAQLY 382 (1196)
Q Consensus 378 l~~~l 382 (1196)
+....
T Consensus 263 Al~~~ 267 (293)
T 2qfc_A 263 ASFFF 267 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 20
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.44 E-value=0.47 Score=51.82 Aligned_cols=147 Identities=8% Similarity=-0.088 Sum_probs=97.3
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
+....-+|..|...|+|.+|+.+|..|+.+.+..+|+-..+.++..++.+..- ..+. .++....+.+|+.++..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-~lg~-----~~~A~~~~~~Al~~~~~ 150 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN-DLHD-----YAKAIDCYELAGEWYAQ 150 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCC-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-hhcC-----HHHHHHHHHHHHHHHHh
Confidence 34455689999999999999999999999999999988777777766532211 0111 13444556777777665
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCH-HHHHHHHHHHHHHhccCCchhhHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDA-SDRLILYIEIARLFGTLDYQRKAAFF 374 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~-~dqi~i~~~lA~vy~~LGf~RK~AF~ 374 (1196)
... . ....++..+++.++...+...++.+.+.++.......-.. ......|..++.+|..+|-.-++.-+
T Consensus 151 ~~~--------~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 221 (292)
T 1qqe_A 151 DQS--------V-ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAART 221 (292)
T ss_dssp TTC--------H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCC--------h-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 321 1 1224778889999999999999999998887653322111 12334566667777777765555444
Q ss_pred HHH
Q 045708 375 SRQ 377 (1196)
Q Consensus 375 lR~ 377 (1196)
++.
T Consensus 222 ~~~ 224 (292)
T 1qqe_A 222 LQE 224 (292)
T ss_dssp HHG
T ss_pred HHH
Confidence 443
No 21
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.14 E-value=0.37 Score=51.39 Aligned_cols=154 Identities=13% Similarity=-0.016 Sum_probs=107.8
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccC--CchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLT--ADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVI 290 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~--~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai 290 (1196)
...+....+|..++..|+|.+|+..|..|+...+.. .|.-..+.++-.++ +......+ ++....+.+++
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~A~~~~~~a~ 138 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKY--------KEAEPLCKRAL 138 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcH--------HHHHHHHHHHH
Confidence 345566779999999999999999999999998776 66666676666664 22222111 34555677788
Q ss_pred HHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCC--CCHHHHHHHHHHHHHHhccCCch
Q 045708 291 LHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSL--IDASDRLILYIEIARLFGTLDYQ 368 (1196)
Q Consensus 291 ~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~l--l~~~dqi~i~~~lA~vy~~LGf~ 368 (1196)
.++.+...+.+ + ....+...++.++...+...++.+.+.++....... -+.......+..+|.+|...|-.
T Consensus 139 ~~~~~~~~~~~-----~--~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 211 (311)
T 3nf1_A 139 EIREKVLGKDH-----P--DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF 211 (311)
T ss_dssp HHHHHHHCTTC-----H--HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCC-----h--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 88766521111 1 235677788888888888888888877765431111 11245678899999999999999
Q ss_pred hhHHHHHHHHHHHH
Q 045708 369 RKAAFFSRQVAQLY 382 (1196)
Q Consensus 369 RK~AF~lR~l~~~l 382 (1196)
.++.-+++.+....
T Consensus 212 ~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 212 KQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99888888876654
No 22
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=94.10 E-value=0.77 Score=49.02 Aligned_cols=159 Identities=15% Similarity=0.137 Sum_probs=96.0
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceeeeeeeeEEECCCCeeEEEEEEEeCee---eeEEEceEEEEEeccc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPISVELPPNSSKVITLSGIPTSV---GPVTIPGCTVHCFGVI 650 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes~~~si~L~P~S~~~I~Lsg~P~~~---G~L~I~G~~~~v~g~~ 650 (1196)
+-+|+..+..+++.|.-.-+|.|..+.+ ... +......-.|+|+..-.|.++.-+... |..+ .-+.+......
T Consensus 15 v~~g~~~~~~~~i~N~g~~pl~i~~~~~-p~~--~~~~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~-~~i~v~~~~~~ 90 (220)
T 2qsv_A 15 SMPEDEGVVRLVVNNTDESDLQVAVVSL-PSF--VSLDDRAFRLQAREPRELNLSLAVPRNMPPGMKD-EPLVLEVTSPE 90 (220)
T ss_dssp BCTTCCCEEEEEEEECSSSCEEEEEEEC-CTT--EECSCCEEEECSSSCEEEEEEECCCTTCCSEEEE-EEEEEEEECTT
T ss_pred ccCCCcceEEEEEEeCCCCceEEEeccC-CCc--eEeeeCcceeCCCCceEEEEEEcchhcccCCcee-eEEEEEEEcCC
Confidence 4468888999999999999999998876 222 334556789999998889998876664 3211 00222221100
Q ss_pred ccccccchhhhhhhhccCCcccCCccccCCCCccCcCCceEEEeC--------CCCcEEEEeeCCCcceEEecccEEEEE
Q 045708 651 TEHIFRDVDNLLLGAAQGLVLSDPFRCCGSAKLKNVSVPNISVVP--------PLPLLVSNVVGGDGAIILYEGEIRDVW 722 (1196)
Q Consensus 651 ~e~~f~~~~~~~~~~~k~~~~~~~~r~~~~~~~~~~~~l~i~VIp--------~qP~L~i~~ts~~~~vmLleGE~~~f~ 722 (1196)
....-.. . -.+.-.++| ..|.+..+ ..-+-. .+ .|+..+.+
T Consensus 91 ~~~~~~~--~--------------------------i~v~g~v~p~~~~~~~~~~~~i~~~-~~~dfG-~i-~g~~~~~~ 139 (220)
T 2qsv_A 91 TGKKAVD--S--------------------------VMVSLPLVDNFPALTAAQTGVMELS-TYLDMG-QL-DGETTKAA 139 (220)
T ss_dssp TCCEEEE--E--------------------------EEEEEEECCCGGGCCGGGCCCEECC-CEEEEE-EC-TTSCEEEE
T ss_pred CCccccc--E--------------------------EEEEEEEcccchhhhhccCCEEEEE-eEEeee-cc-CCCeEEEE
Confidence 0000000 0 011122233 24555544 310111 22 28999999
Q ss_pred EEEEeccccccceEEEEEecCCCcce-EEEeccccccccCCCCCCEEEEEEEEEE
Q 045708 723 ISLANAGTVPVEQAHISLSGKNQDSI-ISIASETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 723 ItL~N~S~~pV~~l~~sf~d~~~~~i-~~~e~e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
++++|+|+.|+..-.+.-+. .+. .+|. +.+|+||++.++.+...+
T Consensus 140 f~i~N~G~~pL~I~~v~~sc---gct~~~~~------~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 140 IEIRNVGAGPLRLHSVTTRN---PALTAVPD------RTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp EEEEECSSSCEEEEEEEECS---TTEEEEES------CSEECTTCEEEEEEEECH
T ss_pred EEEEECCCCCEEEEEEEeCC---CCEeeecC------CccCCCCCEEEEEEEEec
Confidence 99999999998766665433 221 2222 458999999999999987
No 23
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=93.72 E-value=0.48 Score=47.40 Aligned_cols=130 Identities=15% Similarity=0.025 Sum_probs=84.2
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCC-chhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTA-DYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~-D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
.++..-.+|..++..|++.+|+..|.+|+.+++..+ |..+.+.++-.++ +......+ ++....+.+++.+
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~--------~~A~~~~~~al~~ 136 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDL--------AGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHH
Confidence 455666789999999999999999999999999988 4556677666664 22222221 3445557777777
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARL 361 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~v 361 (1196)
..+... + .....+...++..+...+...++.+.+.++.......-+......+...++.+
T Consensus 137 ~~~~~~--------~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 137 AQQADD--------Q-VAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMTRLNGL 196 (203)
T ss_dssp HHHTTC--------H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHhccc--------h-HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcccch
Confidence 665431 1 12245566677777777777777777776655433333334455555555443
No 24
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=93.52 E-value=0.6 Score=43.95 Aligned_cols=108 Identities=15% Similarity=-0.037 Sum_probs=77.2
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
.++....+|..++..|++.+|+..|..|+...+..+|..+.+.++-.++ +......+ ++....+.+++.+.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDY--------EKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHH
Confidence 3456777999999999999999999999999999999988888777664 32222221 34555677777777
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhc
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAA 339 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~ 339 (1196)
.+... ......+...++..+...+...++.+.+.++.
T Consensus 120 ~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 120 QELKD---------RIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 156 (164)
T ss_dssp HHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHccc---------hHhHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 66431 11234667777887777777777777776654
No 25
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.22 E-value=1.2 Score=46.34 Aligned_cols=111 Identities=18% Similarity=0.138 Sum_probs=74.0
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccC--CchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLT--ADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVI 290 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~--~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai 290 (1196)
..++....+|..+...|+|.+|+..|..|+...+.. .|.-..+.++-.++ +..-+..+ ++....+.+++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~al 154 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKA--------EEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHH
Confidence 345677789999999999999999999999998764 44556666666654 22222221 34555677788
Q ss_pred HHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhc
Q 045708 291 LHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAA 339 (1196)
Q Consensus 291 ~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~ 339 (1196)
.++.+...+.+ + ...++...++..+...+...++.+.+.++.
T Consensus 155 ~~~~~~~~~~~-----~--~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 155 EIYATRLGPDD-----P--NVAKTKNNLASCYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp HHHHHHSCTTC-----H--HHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC-----H--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 87766532111 1 234677778888877776666666665554
No 26
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=92.84 E-value=0.15 Score=48.20 Aligned_cols=64 Identities=19% Similarity=0.344 Sum_probs=48.6
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceee---eeeeeEEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFD---AFPISVELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fe---s~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
.++|++..+.|+|+||+.+.|+ +..|..||.-.. .... =.|+|+.+-.+++.++|+.+|.=++.
T Consensus 16 ~~v~~~l~v~vsf~NPL~~~L~--~c~~~vEG~GL~~~~~~~~-~~v~pg~~~~~~~~~~P~~~G~~~L~ 82 (102)
T 2xzz_A 16 AVVGQECEVQIVFKNPLPVTLT--NVVFRLEGSGLQRPKILNV-GDIGGNETVTLRQSFVPVRPGPRQLI 82 (102)
T ss_dssp CCSSSCEEEEEEEECCSSSCBC--SEEEEEEETTTEEEEEEEE-CCBCTTCEEEEEEEECCCSCSSCCCE
T ss_pred cccCCeEEEEEEEECCCCCccc--CEEEEEECCCCCcceEEEc-CcCCCCCEEEEEEEEecCcccceEEE
Confidence 4789999999999999998874 555555554332 2222 34899999999999999999986553
No 27
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=91.11 E-value=5.6 Score=49.37 Aligned_cols=161 Identities=15% Similarity=0.160 Sum_probs=99.3
Q ss_pred EEecCeEEEEEEEECCCcceEEE----eEEEEEeecc---eeeeeeeeEEECCCCeeEEEEEEEeCe-------eeeEEE
Q 045708 574 WVVGEPVQVLVELANPCGFDLRV----DSIYLSVHSG---NFDAFPISVELPPNSSKVITLSGIPTS-------VGPVTI 639 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I----~sI~L~teGv---~Fes~~~si~L~P~S~~~I~Lsg~P~~-------~G~L~I 639 (1196)
...|+.+.|.|++.|.-.-+-.| .-=...-.|+ +|......+.|+|++.+.+.+.+.+.+ ...|+|
T Consensus 527 ~~iG~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~ 606 (731)
T 1ex0_A 527 AVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLEQASLHF 606 (731)
T ss_dssp CBTTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEE
T ss_pred CCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECHHHHhhhccCCCEEEE
Confidence 45799999999999988855322 2222222354 466677889999999999988774432 233333
Q ss_pred ceEEEEEecccccccccchhhhhhhhccCCcccCCccccCCCCccCcCCceEEEeCCCCcEEEEeeCCCcceEEecccEE
Q 045708 640 PGCTVHCFGVITEHIFRDVDNLLLGAAQGLVLSDPFRCCGSAKLKNVSVPNISVVPPLPLLVSNVVGGDGAIILYEGEIR 719 (1196)
Q Consensus 640 ~G~~~~v~g~~~e~~f~~~~~~~~~~~k~~~~~~~~r~~~~~~~~~~~~l~i~VIp~qP~L~i~~ts~~~~vmLleGE~~ 719 (1196)
. +..++-.. .+..+. . -.+.=.-|.|.+++.. .+ --|+..
T Consensus 607 ~-a~~~v~et-~~~~~~---------~------------------------~di~l~~P~l~I~v~g--~~---~v~~~l 646 (731)
T 1ex0_A 607 F-VTARINET-RDVLAK---------Q------------------------KSTVLTIPEIIIKVRG--TQ---VVGSDM 646 (731)
T ss_dssp E-EEEEETTT-CCEEEE---------E------------------------EEEECBCCCCEEEEEE--CC---BTTSCE
T ss_pred E-EEEEECCC-CeEEEE---------E------------------------EEEEEeCCCEEEEeCC--Cc---ccCCeE
Confidence 2 11111111 000000 0 1111122344455441 11 227888
Q ss_pred EEEEEEEeccccccceEEEEEecCCC-cceEEEeccccccccCCCCCCEEEEEEEEEEcccCC
Q 045708 720 DVWISLANAGTVPVEQAHISLSGKNQ-DSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGP 781 (1196)
Q Consensus 720 ~f~ItL~N~S~~pV~~l~~sf~d~~~-~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~ 781 (1196)
..+|+++|.=.+|+....|++..+-= .. ..+.. ..|.||+++++.+.+.-+++|.
T Consensus 647 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~~~~~------~~v~pg~~~~~~~~~~P~~~G~ 702 (731)
T 1ex0_A 647 TVTVQFTNPLKETLRNVWVHLDGPGVTRP-MKKMF------REIRPNSTVQWEEVCRPWVSGH 702 (731)
T ss_dssp EEEEEEECCSSSCEEEEEEEEEETTTEEE-EEEEE------EEECTTCEEEEEEEECCSSCEE
T ss_pred EEEEEEECCCCCcccceEEEEECCCCCce-eeEec------CccCCCCEEEEEEEEEeccccc
Confidence 89999999999999999999988521 11 33332 2689999999999999988885
No 28
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=90.87 E-value=3 Score=46.27 Aligned_cols=152 Identities=11% Similarity=-0.006 Sum_probs=102.5
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
++..-.+|.+++..|++.+|+..|.+|+.+.+..+|....+.++-.++.+.+. .| + .++....+.+++.++.+
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~--~G--~---~~~A~~~~~~al~~~~~ 125 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA--QG--F---LQTAWETQEKAFQLINE 125 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TT--C---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--CC--C---HHHHHHHHHHHHHHHHH
Confidence 34566789999999999999999999999999988876666555544322221 11 1 13445567778888776
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
...+.+ + ....+...++..+...+...++.+.+.+++......- ..+.+..+..+|.+|...|-..++.-++
T Consensus 126 ~~~~~~-----~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~la~~~~~~g~~~~A~~~l 197 (373)
T 1hz4_A 126 QHLEQL-----P--MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ-PQQQLQCLAMLIQCSLARGDLDNARSQL 197 (373)
T ss_dssp TTCTTS-----T--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC-GGGGHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred hccccC-----c--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccC-cHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 532100 1 1234555577777777777888888877765432222 2235677889999999999998888888
Q ss_pred HHHHHHH
Q 045708 376 RQVAQLY 382 (1196)
Q Consensus 376 R~l~~~l 382 (1196)
+.+....
T Consensus 198 ~~a~~~~ 204 (373)
T 1hz4_A 198 NRLENLL 204 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765443
No 29
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=90.63 E-value=8.9 Score=47.44 Aligned_cols=163 Identities=14% Similarity=0.173 Sum_probs=99.6
Q ss_pred EEecCeEEEEEEEECCCcceEEE----eEEEEEeecc---ee-eeeeeeEEECCCCeeEEEEEEEeCe-------eeeEE
Q 045708 574 WVVGEPVQVLVELANPCGFDLRV----DSIYLSVHSG---NF-DAFPISVELPPNSSKVITLSGIPTS-------VGPVT 638 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I----~sI~L~teGv---~F-es~~~si~L~P~S~~~I~Lsg~P~~-------~G~L~ 638 (1196)
...|+.+.|.|++.|.-.-+-.| ..=...-.|+ +| .....++.|+|++.+.+.+.+.+.+ ...|+
T Consensus 483 ~~~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~Y~~~L~d~~~i~ 562 (687)
T 2q3z_A 483 MNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIK 562 (687)
T ss_dssp CBTTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEE
T ss_pred CcCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECHHHHhhhccCCCEEE
Confidence 45799999999999998755332 2222222354 45 5567789999999999988875433 23333
Q ss_pred EceEEEEEecccccccccchhhhhhhhccCCcccCCccccCCCCccCcCCceEEEeCCCCcEEEEeeCCCcceEEecccE
Q 045708 639 IPGCTVHCFGVITEHIFRDVDNLLLGAAQGLVLSDPFRCCGSAKLKNVSVPNISVVPPLPLLVSNVVGGDGAIILYEGEI 718 (1196)
Q Consensus 639 I~G~~~~v~g~~~e~~f~~~~~~~~~~~k~~~~~~~~r~~~~~~~~~~~~l~i~VIp~qP~L~i~~ts~~~~vmLleGE~ 718 (1196)
|. +..++-.. .+..+. +-.+.=.-|.|.+++.. .+ --|+.
T Consensus 563 ~~-a~~~v~et-~~~~~~---------------------------------~~di~l~~P~l~I~v~g--~~---~v~~~ 602 (687)
T 2q3z_A 563 VR-ALLVEPVI-NSYLLA---------------------------------ERDLYLENPEIKIRILG--EP---KQKRK 602 (687)
T ss_dssp EE-EEEEETTT-TEEEEE---------------------------------EEEEECBCCCCEEEEES--CC---SSSSC
T ss_pred EE-EEEEECCC-CeEEEE---------------------------------EEEEEEeCCCEEEEeCC--Cc---ccCCe
Confidence 32 11111111 000010 01111123444555541 11 12888
Q ss_pred EEEEEEEEeccccccceEEEEEecCC-CcceEEEeccccccccCCCCCCEEEEEEEEEEcccCC
Q 045708 719 RDVWISLANAGTVPVEQAHISLSGKN-QDSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGP 781 (1196)
Q Consensus 719 ~~f~ItL~N~S~~pV~~l~~sf~d~~-~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~ 781 (1196)
...+|+++|.=.+|+....|++..+- ...-..+.. ...|.||+++++.+.+.-+++|.
T Consensus 603 ~~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~-----~~~v~pg~~~~~~~~~~P~~~G~ 661 (687)
T 2q3z_A 603 LVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEI-----PDPVEAGEEVKVRMDLVPLHMGL 661 (687)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEE-----CSCBCTTCEEEEEEEECCCSSSC
T ss_pred EEEEEEEECCCCCcccceEEEEECCCCCCCceEEec-----CCCcCCCCEEEEEEEEEeccccc
Confidence 88999999999999999999998852 111112221 02689999999999999988885
No 30
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=90.25 E-value=1.8 Score=41.03 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=63.0
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
|-+|+.++..|+|..|+.+|..|+++-- .+ +.++-.++ |..-+..+ ++....+..|+.+..+..
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~p-~~-----~~~~~nlg~~~~~~~~~--------~~A~~~~~~al~~~~~~~- 76 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELDP-SN-----ITFYNNKAAVYFEEKKF--------AECVQFCEKAVEVGRETR- 76 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT-TC-----HHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC-CC-----HHHHHhHHHHHHHhhhH--------HHHHHHHHHHHHhCcccc-
Confidence 4689999999999999999999998632 22 22333443 32222221 233344555555554432
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.......++..+++..+...+...++.+.+.+++..
T Consensus 77 -------~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 77 -------ADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -------hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 011123467888888888888888888888877643
No 31
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=90.21 E-value=4.5 Score=49.91 Aligned_cols=161 Identities=13% Similarity=0.114 Sum_probs=99.6
Q ss_pred EEecCeEEEEEEEECCCcceE----EEeEEEEEeecc---eeeeeeeeEEECCCCeeEEEEEEEeCe-------eeeEEE
Q 045708 574 WVVGEPVQVLVELANPCGFDL----RVDSIYLSVHSG---NFDAFPISVELPPNSSKVITLSGIPTS-------VGPVTI 639 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL----~I~sI~L~teGv---~Fes~~~si~L~P~S~~~I~Lsg~P~~-------~G~L~I 639 (1196)
...|+.+.|.|++.|.-.-+- .+.-=...-.|+ +|.....++.|+|++.+.+.+.+.+.+ .+.++|
T Consensus 492 ~~~G~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~ 571 (692)
T 1vjj_A 492 LAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISYAQYERYLKSDNMIRI 571 (692)
T ss_dssp CBTTSCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECHHHHHTTCCTTCEEEE
T ss_pred CCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEEE
Confidence 457999999999999776442 222222223454 455667889999999999988874432 233333
Q ss_pred ceEEEEEecccccccccchhhhhhhhccCCcccCCccccCCCCccCcCCceEEEeCCCCcEEEEeeCCCcceEEecccEE
Q 045708 640 PGCTVHCFGVITEHIFRDVDNLLLGAAQGLVLSDPFRCCGSAKLKNVSVPNISVVPPLPLLVSNVVGGDGAIILYEGEIR 719 (1196)
Q Consensus 640 ~G~~~~v~g~~~e~~f~~~~~~~~~~~k~~~~~~~~r~~~~~~~~~~~~l~i~VIp~qP~L~i~~ts~~~~vmLleGE~~ 719 (1196)
. +..++-.. .+ .+. +-.+.=.-|.|.+++.. .. --|+..
T Consensus 572 ~-a~~~v~et-~~-~~~---------------------------------~~di~l~~P~l~I~v~g---~~--~v~~~l 610 (692)
T 1vjj_A 572 T-AVCKVPDE-SE-VVV---------------------------------ERDIILDNPTLTLEVLN---EA--RVRKPV 610 (692)
T ss_dssp E-EEEECTTS-CC-EEE---------------------------------EEEEECBCCCEEEEECS---CC--BTTSCE
T ss_pred E-EEEEECCC-ce-EEE---------------------------------EEEEEEcCCCEEEEeCC---Cc--ccCCeE
Confidence 2 11111110 00 110 01112223445555541 11 128888
Q ss_pred EEEEEEEeccccccceEEEEEecCC-CcceEEEeccccccccCCCCCCEEEEEEEEEEcccCC
Q 045708 720 DVWISLANAGTVPVEQAHISLSGKN-QDSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGP 781 (1196)
Q Consensus 720 ~f~ItL~N~S~~pV~~l~~sf~d~~-~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~ 781 (1196)
..+|+++|.=.+|+....|++..+- ...-..+.. ..|.||+++++.+.+.-+++|.
T Consensus 611 ~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~------~~v~pg~~~~~~~~~~P~~~G~ 667 (692)
T 1vjj_A 611 NVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDV------PTLGPKERSRVRFDILPSRSGT 667 (692)
T ss_dssp EEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEE------CCBCTTCEEEEEEEECCCSCEE
T ss_pred EEEEEEECCCCCcccceEEEEECCCCCCCceEEEc------CccCCCCEEEEEEEEEeccccc
Confidence 8999999999999999999998852 111122221 3799999999999999988885
No 32
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.97 E-value=1.7 Score=49.24 Aligned_cols=146 Identities=12% Similarity=0.044 Sum_probs=100.5
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
...+|.+|...|+|.+|++.|..+.......++.-..+.++..+ -.+.... .+ .+.....+.+++..+.+...
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~-~~---~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLI---EKFEQVP-DS---LDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHH---HHHCSCC-SC---HHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHH---HHHHhCC-CC---HHHHHHHHHHHHHHHHHhCc
Confidence 45689999999999999999999999998888765444443332 1221111 11 12333446677777666431
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
..+ ...+..++++++...+...++.+.+..+........+-.+.+.++..++.+|..+|=.-|+--+++.+
T Consensus 131 -------~~~--~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 201 (434)
T 4b4t_Q 131 -------VFL--KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAA 201 (434)
T ss_dssp -------CSS--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------cHH--HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 122 35788889999998888888888887766543334444678889999999999999887776666655
Q ss_pred HH
Q 045708 379 AQ 380 (1196)
Q Consensus 379 ~~ 380 (1196)
..
T Consensus 202 l~ 203 (434)
T 4b4t_Q 202 RT 203 (434)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 33
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=89.78 E-value=0.96 Score=46.62 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=87.0
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCc--hhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTAD--YFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D--~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
...+|..++..|+|.+|+..|..|+......+. +.|+|.++. - .+ .+.+|+..|.++
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~------~---~~------------~~~~A~~~~~~a 68 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD------N---IK------------KYKEAADYFDIA 68 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH------H---TT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH------H---hh------------cHHHHHHHHHHH
Confidence 345799999999999999999999987742222 222222222 1 11 256677777765
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCH-HHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDA-SDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~-~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
.. ..|. ..++...++..+...+...++.+.+.+++......... ...+.+|..++.+|...|-..++.-+.
T Consensus 69 l~-----~~p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 140 (228)
T 4i17_A 69 IK-----KNYN---LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENY 140 (228)
T ss_dssp HH-----TTCS---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HH-----hCcc---hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHH
Confidence 42 0111 24788888998888888888888888876542211111 223467888899998888888877777
Q ss_pred HHHH
Q 045708 376 RQVA 379 (1196)
Q Consensus 376 R~l~ 379 (1196)
+.++
T Consensus 141 ~~al 144 (228)
T 4i17_A 141 KHAT 144 (228)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6653
No 34
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=89.41 E-value=6.8 Score=48.35 Aligned_cols=160 Identities=19% Similarity=0.230 Sum_probs=98.1
Q ss_pred ecCeEEEEEEEECCCcceEEEeEEEEEe-----ecc---eeeeeeeeEEECCCCeeEEEEEEEeCe-------eeeEEEc
Q 045708 576 VGEPVQVLVELANPCGFDLRVDSIYLSV-----HSG---NFDAFPISVELPPNSSKVITLSGIPTS-------VGPVTIP 640 (1196)
Q Consensus 576 ~gE~~ev~VtLqNPf~feL~I~sI~L~t-----eGv---~Fes~~~si~L~P~S~~~I~Lsg~P~~-------~G~L~I~ 640 (1196)
.|+.+.|.|++.|.-.-+-.+ ++.|.. .|+ +|.....++.|+|++.+.+.+.+.+.+ .+.|+|.
T Consensus 484 ~G~df~v~v~~~N~s~~~~~v-~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y~~Y~~~L~d~~~i~~~ 562 (695)
T 1g0d_A 484 FGTDFDVIVEVKNEGGRDAHA-QLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHYDDYVRCVSEHHLIRVK 562 (695)
T ss_dssp TTCCEEEEEEEEECSSSCEEE-EEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEE
T ss_pred CCCCEEEEEEEEECCCCCEEE-EEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEEEE
Confidence 899999999999977755332 222322 344 455667889999999999888874432 2334433
Q ss_pred eEEEEEecccccccccchhhhhhhhccCCcccCCccccCCCCccCcCCceEEEeCCCCcEEEEeeCCCcceEEecccEEE
Q 045708 641 GCTVHCFGVITEHIFRDVDNLLLGAAQGLVLSDPFRCCGSAKLKNVSVPNISVVPPLPLLVSNVVGGDGAIILYEGEIRD 720 (1196)
Q Consensus 641 G~~~~v~g~~~e~~f~~~~~~~~~~~k~~~~~~~~r~~~~~~~~~~~~l~i~VIp~qP~L~i~~ts~~~~vmLleGE~~~ 720 (1196)
+..++-.. .+..+. . =.+.=.-|.|.+++. +.. --|+...
T Consensus 563 -a~~~v~et-~~~~~~---------~------------------------~di~l~~P~l~I~v~---g~~--~v~~~l~ 602 (695)
T 1g0d_A 563 -ALLDAPGE-NGPIMT---------V------------------------ANIPLSTPELLVQVP---GKA--VVWEPLT 602 (695)
T ss_dssp -EEEECCC----EEEE---------E------------------------EEEECBCCCCEEECC---SCE--ETTCCEE
T ss_pred -EEEEECCC-CeEEEE---------E------------------------EEEEEcCCCEEEEeC---CCc--ccCCeEE
Confidence 11111111 000000 0 011112234455554 111 2388888
Q ss_pred EEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEEcccCC
Q 045708 721 VWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGP 781 (1196)
Q Consensus 721 f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~ 781 (1196)
.+|+++|.=.+|+....|++..+-=-.-..+.. ...|+||+++++.+.+.-+++|.
T Consensus 603 a~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~-----~~~v~Pg~~~~~~~~~~P~~~G~ 658 (695)
T 1g0d_A 603 AYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHV-----NGAVAPSGKVSVKLSFSPMRTGV 658 (695)
T ss_dssp EEEEEECCSSSCEESCEEEEEETTTEEEEEEEC-----SSEECTTCEEEEEEEECCSSCEE
T ss_pred EEEEEECCCCCcccceEEEEECCCCCcceEEec-----CCCcCCCCEEEEEEEEEcCCccc
Confidence 999999999999999999998742111133332 12689999999999999988885
No 35
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=88.76 E-value=2.1 Score=53.71 Aligned_cols=126 Identities=15% Similarity=0.106 Sum_probs=86.1
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIP 299 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p 299 (1196)
..+|..++..|++.+|++.|..|+++-- .+ +.|+-.++.+. .+.+ ++++|+..|+++..
T Consensus 13 ~nLG~~~~~~G~~~eAi~~~~kAl~l~P-~~-----~~a~~nLg~~l--~~~g------------~~~eA~~~~~~Al~- 71 (723)
T 4gyw_A 13 NNLANIKREQGNIEEAVRLYRKALEVFP-EF-----AAAHSNLASVL--QQQG------------KLQEALMHYKEAIR- 71 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCS-CC-----HHHHHHHHHHH--HHTT------------CHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC-CC-----HHHHHHHHHHH--HHcC------------CHHHHHHHHHHHHH-
Confidence 3579999999999999999999998632 22 22332232111 1122 26667777776542
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 300 DNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 300 ~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
-.|. ..++...++..+...+...++.+.+.+++.... +....+..++.+|..+|-..++.-..+.++
T Consensus 72 ----l~P~---~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P------~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al 138 (723)
T 4gyw_A 72 ----ISPT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQINP------AFADAHSNLASIHKDSGNIPEAIASYRTAL 138 (723)
T ss_dssp ----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----hCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0011 147888899999988888899999988865422 235678889999999998888777777654
No 36
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=88.57 E-value=1.6 Score=42.63 Aligned_cols=103 Identities=13% Similarity=0.055 Sum_probs=66.3
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhcc------CCchhhH------HHhHHHHH-HHHhhhccCCCchhhHHHH
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARL------TADYFWY------AGALEGSV-CALLVDRMGQKDAVLEEEV 282 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~------~~D~LWl------AsALEGi~-~~llL~~~~~~~~~~~~ei 282 (1196)
....+-.|+.++..|+|.+|+..|..|+..+.. ..|..|. +.++-.++ |..-+.
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~------------- 77 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIG------------- 77 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-------------
Confidence 445677899999999999999999999998643 2333332 22222222 222221
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 283 KFRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 283 ~~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.+.+|+..|.++.. ..|- ..++..+.+..+...+...++.+.+.+++..
T Consensus 78 --~~~~A~~~~~~al~------~~p~--~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 78 --DLHEAEETSSEVLK------REET--NEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp --CHHHHHHHHHHHHH------HSTT--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHh------cCCc--chHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 15556666655431 0010 2578889999998888888888888877643
No 37
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=88.39 E-value=1.5 Score=43.50 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=43.1
Q ss_pred EEEEEEEECCCcceEEEeEE--EEEeecceeee--eeeeEEECCCCeeEEEEEEEe
Q 045708 580 VQVLVELANPCGFDLRVDSI--YLSVHSGNFDA--FPISVELPPNSSKVITLSGIP 631 (1196)
Q Consensus 580 ~ev~VtLqNPf~feL~I~sI--~L~teGv~Fes--~~~si~L~P~S~~~I~Lsg~P 631 (1196)
..+.+.++||..++|.|+.+ .+...|+.|-. ....+.|||++..++.++.+-
T Consensus 20 ~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i 75 (136)
T 3but_A 20 IVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRL 75 (136)
T ss_dssp EEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEE
T ss_pred EEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEE
Confidence 56778999999999999966 77778998876 466799999998888887643
No 38
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=87.37 E-value=2.7 Score=50.24 Aligned_cols=137 Identities=12% Similarity=-0.026 Sum_probs=93.1
Q ss_pred hhcCChHHHHHHHHHHHHHhcc--CCchhhHHHhHHHHHHHH-hhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 045708 227 LLAGSPVDANAHYSTALELARL--TADYFWYAGALEGSVCAL-LVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDNAQ 303 (1196)
Q Consensus 227 LLaG~~~DAL~~Y~eAi~~lk~--~~D~LWlAsALEGi~~~l-lL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n~e 303 (1196)
...|+|.+|+..|..|+++..+ ..||.+.|.++..++.+. -..++ ++....+.+++..|.+...+.+
T Consensus 320 ~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~--------~eA~~~~~~aL~i~~~~lG~~H-- 389 (490)
T 3n71_A 320 RSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAY--------EEASHYARRMVDGYMKLYHHNN-- 389 (490)
T ss_dssp HTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHHSCTTC--
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHHHcCCCC--
Confidence 3569999999999999999877 589999999999886332 22222 4666678899999988764332
Q ss_pred CCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCH--HHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 304 RVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDA--SDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 304 ~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~--~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
|. + ..+...+|..+..++...++..++.+|+.+-...+.+ -+=..++..++..|..+|..+.+-+..|.+
T Consensus 390 ---p~-~-a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 390 ---AQ-L-GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp ---HH-H-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HH-H-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 1 4678889999998888888888888877552111111 122334455666666677666655555543
No 39
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=87.27 E-value=1.2 Score=54.98 Aligned_cols=66 Identities=24% Similarity=0.222 Sum_probs=50.7
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceeeeeeeeE--EECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPISV--ELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes~~~si--~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
-++|+++.+.|+|+|||++.|+==-+.+...|..=. ....+ .|+|+.+..+++.++|+.+|.=++.
T Consensus 595 ~~v~~~l~a~vsf~NPL~~~L~~c~~~vEG~GL~~~-~~~~~~~~v~Pg~~~~~~~~~~P~~~G~r~L~ 662 (695)
T 1g0d_A 595 AVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSA-TQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLL 662 (695)
T ss_dssp EETTCCEEEEEEEECCSSSCEESCEEEEEETTTEEE-EEEECSSEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred cccCCeEEEEEEEECCCCCcccceEEEEECCCCCcc-eEEecCCCcCCCCEEEEEEEEEcCCccceEEE
Confidence 588999999999999999887544444444444222 33344 6999999999999999999997663
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=86.69 E-value=2.9 Score=39.65 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=61.6
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
.|-+|+.++..|+|.+|+..|..|+.+-- .+-..| -.++ |..-+ + .+.+|+..|.++.
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~-----~~~~~~~~~~---~------------~~~~A~~~~~~al 74 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVKRDP-ENAILY-----SNRAACLTKL---M------------EFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHH-----HHHHHHHHHT---T------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHH-----HHHhhHHHhh---c------------cHHHHHHHHHHHH
Confidence 34579999999999999999999997543 222222 2222 22222 1 1555666666543
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 298 IPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 298 ~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
. -.|. ..++...++..+...+...++.+.+.+++..
T Consensus 75 ~-----~~p~---~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 75 R-----LDSK---FIKGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp H-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred H-----hhhh---hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 1 0011 1478888999998888888999988887654
No 41
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=86.32 E-value=9.1 Score=42.32 Aligned_cols=90 Identities=16% Similarity=0.017 Sum_probs=50.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccC
Q 045708 286 YNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTL 365 (1196)
Q Consensus 286 ~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~L 365 (1196)
+.+|...|.+...+... +. .+...+..-+++.+...+...++.+.+.++.......-...+....+..+|.+|...
T Consensus 231 ~~~A~~~~~~a~~~~~~---~~-~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~ 306 (373)
T 1hz4_A 231 KAAAANWLRHTAKPEFA---NN-HFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQA 306 (373)
T ss_dssp HHHHHHHHHHSCCCCCT---TC-GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCC---cc-hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHh
Confidence 56777788776532110 11 122234556677777777777777777766543111111234555677777777777
Q ss_pred CchhhHHHHHHHHH
Q 045708 366 DYQRKAAFFSRQVA 379 (1196)
Q Consensus 366 Gf~RK~AF~lR~l~ 379 (1196)
|=..++.=.++.++
T Consensus 307 g~~~~A~~~l~~al 320 (373)
T 1hz4_A 307 GRKSDAQRVLLDAL 320 (373)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 76655555555543
No 42
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=86.31 E-value=3.2 Score=42.16 Aligned_cols=108 Identities=13% Similarity=-0.004 Sum_probs=71.9
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc--hhh----HHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHH
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTAD--YFW----YAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVI 290 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D--~LW----lAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai 290 (1196)
..+-+|+.++..|+|.+|+..|..|+.+.-..-| .+. .+.+.-... |+.-+.++ ++....++.||
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~--------~eAl~~~~kAL 84 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF--------DEALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCH--------HHHHHHHHHHH
Confidence 4567899999999999999999999998776211 001 111222222 22223222 46667788899
Q ss_pred HHHhhcCCCCCCCCCCCchhhHHHH----HHHHHHHhhccchHHHHHHHHhhccC
Q 045708 291 LHYRKSFIPDNAQRVSPLSFELEAT----LKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 291 ~lY~ks~~p~n~e~~p~l~~~~Ea~----Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.+|++.+. . .|. ..++. .+.+..|...+...|+.+.+.+++..
T Consensus 85 ~l~n~~~e-~----~pd---~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 85 HYFNRRGE-L----NQD---EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHCC-T----TST---HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred Hhhhcccc-C----CCc---hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 88888762 0 111 23566 78888888888888999998888754
No 43
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=86.15 E-value=5.5 Score=44.47 Aligned_cols=128 Identities=9% Similarity=-0.010 Sum_probs=81.9
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCch---------hhHHHhHHHHH-HHHhhhccCCCchhhHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADY---------FWYAGALEGSV-CALLVDRMGQKDAVLEEEVKF 284 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~---------LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~ 284 (1196)
.....+.+|+.++..|+|.+|+..|..|+.+.....+. -..+.++-.++ |..-+.
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g--------------- 210 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ--------------- 210 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT---------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC---------------
Confidence 34456678999999999999999999999987655320 01112222221 111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhcc
Q 045708 285 RYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGT 364 (1196)
Q Consensus 285 ~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~ 364 (1196)
++.+|+..|.++.. -.|. ..++..+++..+...+...++.+.+.+++..... ...++..++.+|..
T Consensus 211 ~~~~A~~~~~~al~-----~~p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~------~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 211 AFSAAIESCNKALE-----LDSN---NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN------NKAAKTQLAVCQQR 276 (336)
T ss_dssp CHHHHHHHHHHHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS------CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----hCCC---cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHH
Confidence 25667777766542 0011 1478888999998888888999988887654221 12466777788877
Q ss_pred CCchhhH
Q 045708 365 LDYQRKA 371 (1196)
Q Consensus 365 LGf~RK~ 371 (1196)
+|=..++
T Consensus 277 ~~~~~~a 283 (336)
T 1p5q_A 277 IRRQLAR 283 (336)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 44
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=85.96 E-value=1.6 Score=44.16 Aligned_cols=107 Identities=20% Similarity=0.072 Sum_probs=67.4
Q ss_pred hhhccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHH-----------HhHHHHH-HHHhhhccCCCchhh
Q 045708 211 KKRRLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYA-----------GALEGSV-CALLVDRMGQKDAVL 278 (1196)
Q Consensus 211 kkR~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlA-----------sALEGi~-~~llL~~~~~~~~~~ 278 (1196)
.+.......+.+|+.++..|+|.+|+..|..|+.......|+ +.+ .++-.++ |..-+ +
T Consensus 33 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~---~------ 102 (198)
T 2fbn_A 33 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEW-DDQILLDKKKNIEISCNLNLATCYNKN---K------ 102 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTC-CCHHHHHHHHHHHHHHHHHHHHHHHHT---T------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHHHHHHHh---c------
Confidence 333455667789999999999999999999999877655442 111 2222222 11111 1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 279 EEEVKFRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 279 ~~ei~~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.+.+|+..|.++.. ..|. ..++.+.++..+...+...++.+.+.+++..
T Consensus 103 ------~~~~A~~~~~~al~-----~~p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 103 ------DYPKAIDHASKVLK-----IDKN---NVKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp ------CHHHHHHHHHHHHH-----HSTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHH-----hCcc---cHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 14555555555431 0011 1478888888888888888888888877643
No 45
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=85.93 E-value=1.8 Score=49.53 Aligned_cols=105 Identities=11% Similarity=0.003 Sum_probs=68.4
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCC----------chhhHHHhHHHHH-HHHhhhccCCCchhhHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTA----------DYFWYAGALEGSV-CALLVDRMGQKDAVLEEEV 282 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~----------D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei 282 (1196)
......+.+|+.++..|+|.+|+..|..|+..+.... ..--.+.++-.++ |+.-+
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-------------- 286 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM-------------- 286 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT--------------
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 3445577889999999999999999999998765421 1111222222222 11111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 283 KFRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 283 ~~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.++.+|+..|.++..- .|. ..++..+++..+...+...++.+.+.+++..
T Consensus 287 -g~~~~A~~~~~~al~~-----~p~---~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 287 -SDWQGAVDSCLEALEI-----DPS---NTKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp -TCHHHHHHHHHHHHTT-----CTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHHh-----Cch---hHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 1267777888776520 011 2478888999888888888898888887654
No 46
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=85.81 E-value=10 Score=37.14 Aligned_cols=144 Identities=11% Similarity=0.024 Sum_probs=78.1
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhh--HHHhHHHH--H--HHHhhhc---cCCCchhhHH---HH---HHH
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFW--YAGALEGS--V--CALLVDR---MGQKDAVLEE---EV---KFR 285 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LW--lAsALEGi--~--~~llL~~---~~~~~~~~~~---ei---~~~ 285 (1196)
-+|+.|+..|+|.+|++.|..|+++-- .+-..| +|.++... . +.-.+.. ....+..... .+ ...
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKADP-NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDE 88 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCC
Confidence 479999999999999999999997532 222222 22222110 0 0000000 0000000000 00 001
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccC
Q 045708 286 YNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTL 365 (1196)
Q Consensus 286 ~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~L 365 (1196)
+..++..|.++.. ..+ -..++...++..+...+...++.+.+.+++.... +...++..+|.+|..+
T Consensus 89 ~~~a~~~~~~a~~------~~~--~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p------~~~~~~~~lg~~~~~~ 154 (184)
T 3vtx_A 89 KQAAIDALQRAIA------LNT--VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP------GFIRAYQSIGLAYEGK 154 (184)
T ss_dssp HHHHHHHHHHHHH------HCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH------hCc--cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc------hhhhHHHHHHHHHHHC
Confidence 4455555554421 001 0135666677777777777788888777654321 2345777888888888
Q ss_pred CchhhHHHHHHHHH
Q 045708 366 DYQRKAAFFSRQVA 379 (1196)
Q Consensus 366 Gf~RK~AF~lR~l~ 379 (1196)
|-.-++.-+.+.++
T Consensus 155 g~~~~A~~~~~~al 168 (184)
T 3vtx_A 155 GLRDEAVKYFKKAL 168 (184)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 88777776666653
No 47
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=85.77 E-value=8.9 Score=39.11 Aligned_cols=149 Identities=12% Similarity=-0.016 Sum_probs=81.9
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccC-CchhhHHHhHHHHH-HHHhhhccCCCchhhH--------HHH---
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLT-ADYFWYAGALEGSV-CALLVDRMGQKDAVLE--------EEV--- 282 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~-~D~LWlAsALEGi~-~~llL~~~~~~~~~~~--------~ei--- 282 (1196)
......+|..+...|+|.+|+..|..|+...... .|+.+.+.++-.++ +..-+..+.+.-.... .++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 117 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTK 117 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHH
Confidence 3445567888888888888888888888877654 36655555555553 2222211100000000 000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q 045708 283 KFRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLF 362 (1196)
Q Consensus 283 ~~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy 362 (1196)
...+.+|+..|.+... ..+ -..++...++..+...+...++.+.+.+++..... ...++..+|.+|
T Consensus 118 ~~~~~~a~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~ 183 (258)
T 3uq3_A 118 LRNAEKELKKAEAEAY------VNP--EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE------DARGYSNRAAAL 183 (258)
T ss_dssp HHHHHHHHHHHHHHHH------CCH--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHH------cCc--chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc------cHHHHHHHHHHH
Confidence 1124455555554321 111 12456666777777777777777777776543211 235677777777
Q ss_pred ccCCchhhHHHHHHHH
Q 045708 363 GTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 363 ~~LGf~RK~AF~lR~l 378 (1196)
...|-..++.-+++.+
T Consensus 184 ~~~~~~~~A~~~~~~a 199 (258)
T 3uq3_A 184 AKLMSFPEAIADCNKA 199 (258)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHH
Confidence 7777666665555544
No 48
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=84.73 E-value=20 Score=38.51 Aligned_cols=145 Identities=8% Similarity=-0.014 Sum_probs=90.5
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCC
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDN 301 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n 301 (1196)
.+..++..|+|..|++.|.+++.......+..-.+...-+++. .... .+ + +++|+..|.++..-..
T Consensus 81 ~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~--~----------~~~A~~~~~~al~~~~ 146 (293)
T 2qfc_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAA-YVLK-KV--D----------YEYCILELKKLLNQQL 146 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH-HHHT-SS--C----------HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHH-HHhc-CC--C----------HHHHHHHHHHHHHHHh
Confidence 5778899999999999999999877654444333333322221 1111 11 1 4556666665532000
Q ss_pred CCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCC-CCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHH
Q 045708 302 AQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAK-SLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 302 ~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~-~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
. ..... ...++...++.++...+...++.+.+.++..... ...+..-.+.+|..++.+|..+|-.-++--+...++.
T Consensus 147 ~-~~~~~-~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~ 224 (293)
T 2qfc_A 147 T-GIDVY-QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp C-SSCTT-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred c-CCchH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 0 00111 1246677788888888888888888887763311 1111222347899999999999999999999998776
Q ss_pred HH
Q 045708 381 LY 382 (1196)
Q Consensus 381 ~l 382 (1196)
..
T Consensus 225 ~~ 226 (293)
T 2qfc_A 225 IS 226 (293)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=84.34 E-value=4.9 Score=50.38 Aligned_cols=130 Identities=13% Similarity=0.073 Sum_probs=88.6
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
.-.+|..++..|++.+|+.+|..|+++--. + +.|+-.++.+.. ..+ ++++|+..|+|+..
T Consensus 46 ~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~-----~~a~~nLg~~l~--~~g------------~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 46 HSNLASVLQQQGKLQEALMHYKEAIRISPT-F-----ADAYSNMGNTLK--EMQ------------DVQGALQCYTRAIQ 105 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-C-----HHHHHHHHHHHH--HTT------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-C-----HHHHHHHHHHHH--HcC------------CHHHHHHHHHHHHH
Confidence 345799999999999999999999975322 1 223333321111 111 26677777777642
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
-.|. ..++...++..+...+...++.+.+.+++.... +....+..++.+|..+|-...+.-..+.+
T Consensus 106 -----l~P~---~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P------~~~~a~~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 106 -----INPA---FADAHSNLASIHKDSGNIPEAIASYRTALKLKP------DFPDAYCNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp -----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS------CCHHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred -----hCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CChHHHhhhhhHHHhcccHHHHHHHHHHH
Confidence 0111 257888899999999999999999988875422 23557888999999999888777766666
Q ss_pred HHHH
Q 045708 379 AQLY 382 (1196)
Q Consensus 379 ~~~l 382 (1196)
+...
T Consensus 172 l~l~ 175 (723)
T 4gyw_A 172 VSIV 175 (723)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 5544
No 50
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=84.25 E-value=21 Score=31.67 Aligned_cols=124 Identities=17% Similarity=0.184 Sum_probs=72.8
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCC
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPD 300 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~ 300 (1196)
.+|..++..|++.+|+..|..++..... +...|. .++ .+....+ .+.+|+..|.+...
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~-----~~a--~~~~~~~------------~~~~A~~~~~~~~~-- 63 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWY-----NLG--NAYYKQG------------DYDEAIEYYQKALE-- 63 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHH-----HHH--HHHHHHT------------CHHHHHHHHHHHHH--
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHH-----HHH--HHHHHhc------------CHHHHHHHHHHHHH--
Confidence 4789999999999999999999875322 222221 111 0111111 13444555544321
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 301 NAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 301 n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
..|. ..++...++..+...+...++.+.+.++..... +....+..+|.+|...|-..++.-+++.+
T Consensus 64 ---~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 64 ---LDPR---SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------RSAEAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp ---HCTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred ---HCCC---chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 0011 135566677777777777778777776654321 12346677888888888777776666554
No 51
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=84.11 E-value=0.99 Score=43.84 Aligned_cols=77 Identities=9% Similarity=0.180 Sum_probs=54.7
Q ss_pred eecceeeEEEEecCchhcccceeeeeec-cCCCccccCCCCCcEEe--c-cc--cccc-ccccCCCCceeEEEEEE-EEe
Q 045708 1078 AHDMTPMEVLVRNNTKEMIKMSLSITCR-DVAGENCIEGTKPTVLW--S-GV--LNEI-TMEVPPLQESKHCFSLY-FLV 1149 (1196)
Q Consensus 1078 ~~~~~~~~v~v~n~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~-g~--l~~~-~~~~~~~~~~~~~~~~~-~l~ 1149 (1196)
..+-..+.+.|+|++.+++.+..+=+|+ |.. +.|... +.+| + |- .|.+ ...++||++....+..- .+.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~---v~d~~G-~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~ 91 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELV---VYDSEH-KERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPE 91 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEE---EECTTC-CEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCC
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEE---EECCCC-CEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCC
Confidence 3456789999999999999998885554 331 333222 4566 2 22 2333 56788999999988877 578
Q ss_pred cceEEEEEE
Q 045708 1150 PGEYTLVAA 1158 (1196)
Q Consensus 1150 ~g~~~~~~~ 1158 (1196)
||+|++.|-
T Consensus 92 pG~Ytl~a~ 100 (120)
T 3isy_A 92 PGTYEVKVT 100 (120)
T ss_dssp SEEEEEEEE
T ss_pred CccEEEEEE
Confidence 999999874
No 52
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=83.61 E-value=1 Score=55.52 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=51.4
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceeee--eeeeE--EECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDA--FPISV--ELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes--~~~si--~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
-++|+++.+.|+|+|||.+.| ++..|..||.-... ....+ .|+|+.+.++++.++|+.+|.=+|.
T Consensus 597 ~~v~~~~~v~v~f~NPL~~~L--~~c~~~vEG~GL~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~ 665 (687)
T 2q3z_A 597 PKQKRKLVAEVSLQNPLPVAL--EGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLV 665 (687)
T ss_dssp CSSSSCEEEEEEEECCSSSCB--CSEEEEEECTTTCSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEEE
T ss_pred cccCCeEEEEEEEECCCCCcc--cceEEEEECCCCCCCceEEecCCCcCCCCEEEEEEEEEeccccceEEE
Confidence 468999999999999999876 46666666654432 23445 6899999999999999999997763
No 53
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=83.50 E-value=3 Score=51.68 Aligned_cols=64 Identities=23% Similarity=0.275 Sum_probs=49.4
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceee---eeeeeEEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFD---AFPISVELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fe---s~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
.++|+++.+.|+|+|||.+.|+ +..|..||.-.. .... =.|+|+.+..+++.++|+.+|.=+|.
T Consensus 640 ~~v~~~l~v~vsf~NPL~~~L~--~c~~~vEG~GL~~~~~~~~-~~v~pg~~~~~~~~~~P~~~G~r~L~ 706 (731)
T 1ex0_A 640 QVVGSDMTVTVQFTNPLKETLR--NVWVHLDGPGVTRPMKKMF-REIRPNSTVQWEEVCRPWVSGHRKLI 706 (731)
T ss_dssp CBTTSCEEEEEEEECCSSSCEE--EEEEEEEETTTEEEEEEEE-EEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred cccCCeEEEEEEEECCCCCccc--ceEEEEECCCCCceeeEec-CccCCCCEEEEEEEEEeccccceEEE
Confidence 4789999999999999998875 555555554322 2222 36999999999999999999997663
No 54
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=83.30 E-value=15 Score=39.52 Aligned_cols=145 Identities=8% Similarity=-0.008 Sum_probs=88.0
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCC
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDN 301 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n 301 (1196)
.+..++..|.|.+|++.|.+++.......|..-.+..+.+++.. .+ ...+ +.+|+..|.++..-..
T Consensus 81 ~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~-~~---~~~~----------~~~Ai~~~~~al~~~~ 146 (293)
T 3u3w_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAY-VL---KKVD----------YEYCILELKKLLNQQL 146 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH-HT---TSSC----------HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHH-HH---cccC----------HHHHHHHHHHHHHHhc
Confidence 35678889999999999999987555444432112222333221 11 1111 3444445544321000
Q ss_pred CCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCC-CCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHH
Q 045708 302 AQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSL-IDASDRLILYIEIARLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 302 ~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~l-l~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
..+.....+.+...++.+....+...++.+.+.+++...... .+....+.+|..++.+|..+|-.-++--+...+..
T Consensus 147 --~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 147 --TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp --CCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --ccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 000111234566677877777777778888877776431111 24467788999999999999999999888888766
Q ss_pred HH
Q 045708 381 LY 382 (1196)
Q Consensus 381 ~l 382 (1196)
..
T Consensus 225 ~~ 226 (293)
T 3u3w_A 225 IS 226 (293)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 55
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=83.19 E-value=15 Score=37.45 Aligned_cols=140 Identities=13% Similarity=0.041 Sum_probs=78.5
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
......+|+.++..|+|.+|+..|..|+... .+.. ++-.++ |...+..+ ++....+..++.+..
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~-----~~~~~~~~~~~~~~~--------~~A~~~~~~a~~~~~ 69 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDIT-----YLNNRAAAEYEKGEY--------ETAISTLNDAVEQGR 69 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTH-----HHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHH-----HHHHHHHHHHHcccH--------HHHHHHHHHHHHhCc
Confidence 3455678999999999999999999999876 2222 222222 11111111 233334555555544
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCC---------------------CCCHHHHHH
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKS---------------------LIDASDRLI 353 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~---------------------ll~~~dqi~ 353 (1196)
+.. +......++...++..+...+...++.+.+.++...... ... .+...
T Consensus 70 ~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~ 140 (258)
T 3uq3_A 70 EMR--------ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVN-PEKAE 140 (258)
T ss_dssp HTT--------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC-HHHHH
T ss_pred ccc--------cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcC-cchHH
Confidence 321 011112456666777776666666666666665542110 011 23455
Q ss_pred HHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 354 LYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 354 i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
++..++.+|...|-..++.-+++.++
T Consensus 141 ~~~~~~~~~~~~~~~~~A~~~~~~a~ 166 (258)
T 3uq3_A 141 EARLEGKEYFTKSDWPNAVKAYTEMI 166 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 66677777777776666665555543
No 56
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=83.10 E-value=5.4 Score=46.76 Aligned_cols=126 Identities=10% Similarity=0.011 Sum_probs=77.4
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc---hhhH------HHhHHHHH-HHHhhhccCCCchhhHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTAD---YFWY------AGALEGSV-CALLVDRMGQKDAVLEEEVK 283 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D---~LWl------AsALEGi~-~~llL~~~~~~~~~~~~ei~ 283 (1196)
......+.+|+.++..|+|.+|+..|..|+.+.....+ -.|. +.++-.++ |..-+.
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-------------- 331 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR-------------- 331 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT--------------
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 34556677899999999999999999999998765532 1110 11121221 211111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhc
Q 045708 284 FRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFG 363 (1196)
Q Consensus 284 ~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~ 363 (1196)
++.+|+..|.++.. ..|. ..++..+.+..+...+...++.+.+.+++..... -..++..++.+|.
T Consensus 332 -~~~~A~~~~~~al~-----~~p~---~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~------~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 332 -EYTKAVECCDKALG-----LDSA---NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ------NKAARLQISMCQK 396 (457)
T ss_dssp -CHHHHHHHHHHHHH-----HSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----------CHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHh-----cCCc---cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHH
Confidence 25666677766542 0011 1478889999998888888999999988765322 1235555666665
Q ss_pred cCCch
Q 045708 364 TLDYQ 368 (1196)
Q Consensus 364 ~LGf~ 368 (1196)
.+|=.
T Consensus 397 ~~~~~ 401 (457)
T 1kt0_A 397 KAKEH 401 (457)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55533
No 57
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=82.87 E-value=15 Score=37.59 Aligned_cols=29 Identities=28% Similarity=0.260 Sum_probs=15.6
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHH
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
+....+|..++..|++.+|+..|..|+..
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 66 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEI 66 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 34445555555555555555555555543
No 58
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=82.79 E-value=9.9 Score=39.04 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 312 LEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 312 ~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
.++...++..+...+...++.+.+.++..... +....+..++.+|...|-..++.-+++.+
T Consensus 175 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~A~~~~~~~ 235 (252)
T 2ho1_A 175 PSVALEMADLLYKEREYVPARQYYDLFAQGGG------QNARSLLLGIRLAKVFEDRDTAASYGLQL 235 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc------CcHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 35666777777777777777777776654321 12334566677777777766666555554
No 59
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.39 E-value=2.3 Score=41.21 Aligned_cols=59 Identities=20% Similarity=0.190 Sum_probs=41.5
Q ss_pred cccEEEEEEEEEeccccccceEEEEEecC----------CCcceEEEeccc-c---ccccCCCCCCEEEEEEEEEE
Q 045708 715 EGEIRDVWISLANAGTVPVEQAHISLSGK----------NQDSIISIASET-L---KSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 715 eGE~~~f~ItL~N~S~~pV~~l~~sf~d~----------~~~~i~~~e~e~-~---~~~~~I~PG~s~t~~i~v~g 776 (1196)
.|+.-.|.++++|.|+.++. +.|.+. ....++.|..+- + .....|+||++.+|..++-.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~---l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIE---FQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEE---EEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred CCCeEEEEEEEEcCCCCcEE---EEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 78899999999999998873 444443 333444444332 2 22478999999999998873
No 60
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.30 E-value=18 Score=35.90 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=83.2
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
.+....+|..++..|++.+|++.|..++...... .. ++-.++.+. . ..+ .+.+|+..|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~-----~~~~l~~~~-~-~~~------------~~~~A~~~~~~ 67 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKN-EL-----AWLVRAEIY-Q-YLK------------VNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HH-----HHHHHHHHH-H-HTT------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hH-----HHHHHHHHH-H-HcC------------ChHHHHHHHHH
Confidence 3445678999999999999999999999864322 11 222221111 1 111 14455555555
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhc-cchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRR-ELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFF 374 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~-~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~ 374 (1196)
+.. ..|. ..++...++.++... +...++.+.+.++...+ .. .+...++..++.+|...|-..++.-+
T Consensus 68 a~~-----~~~~---~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~--~~--~~~~~~~~~l~~~~~~~~~~~~A~~~ 135 (225)
T 2vq2_A 68 ALS-----IKPD---SAEINNNYGWFLCGRLNRPAESMAYFDKALADP--TY--PTPYIANLNKGICSAKQGQFGLAEAY 135 (225)
T ss_dssp HHH-----HCTT---CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTST--TC--SCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHH-----hCCC---ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCc--CC--cchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 431 0011 136677788888888 88888888888876511 11 23456788889999999988887766
Q ss_pred HHHHH
Q 045708 375 SRQVA 379 (1196)
Q Consensus 375 lR~l~ 379 (1196)
++.+.
T Consensus 136 ~~~~~ 140 (225)
T 2vq2_A 136 LKRSL 140 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 61
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=82.05 E-value=6.4 Score=41.93 Aligned_cols=86 Identities=9% Similarity=0.020 Sum_probs=46.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHHHh
Q 045708 286 YNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAK---SLIDASDRLILYIEIARLF 362 (1196)
Q Consensus 286 ~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~---~ll~~~dqi~i~~~lA~vy 362 (1196)
+.+|+..|+++.. ..|. ..++...++.++...+...++.+.+.++..... ..........++..+|.+|
T Consensus 175 ~~~A~~~~~~al~-----~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~ 246 (330)
T 3hym_B 175 SKLAERFFSQALS-----IAPE---DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVC 246 (330)
T ss_dssp HHHHHHHHHHHHT-----TCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCCC---ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHH
Confidence 4566666666542 0011 135556667766666666666666665543211 1111122345667777777
Q ss_pred ccCCchhhHHHHHHHHH
Q 045708 363 GTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 363 ~~LGf~RK~AF~lR~l~ 379 (1196)
...|-..++.-+++.++
T Consensus 247 ~~~g~~~~A~~~~~~a~ 263 (330)
T 3hym_B 247 RKLKKYAEALDYHRQAL 263 (330)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHH
Confidence 77777666666555543
No 62
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=81.87 E-value=22 Score=33.71 Aligned_cols=129 Identities=10% Similarity=-0.003 Sum_probs=79.2
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
....+|..++..|++.+|+..|..++.... .+...|. .++.+ +. ..+ .+.+|+..|.++.
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~-----~~a~~-~~-~~~------------~~~~A~~~~~~~~ 103 (186)
T 3as5_A 44 VALHLGIAYVKTGAVDRGTELLERSLADAP-DNVKVAT-----VLGLT-YV-QVQ------------KYDLAVPLLIKVA 103 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHH-----HHHHH-HH-HHT------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CCHHHHH-----HHHHH-HH-Hhc------------CHHHHHHHHHHHH
Confidence 445689999999999999999999987632 2222222 11111 11 111 1445555555442
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHH
Q 045708 298 IPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQ 377 (1196)
Q Consensus 298 ~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~ 377 (1196)
. ..|. ..++...++..+...+...++.+.+.++..... +....+..+|.+|...|-..++.-+++.
T Consensus 104 ~-----~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~ 169 (186)
T 3as5_A 104 E-----ANPI---NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP------NEGKVHRAIAFSYEQMGRHEEALPHFKK 169 (186)
T ss_dssp H-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred h-----cCcH---hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc------cchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1 0011 136667788888777777788887777654321 1245778888899888888777777666
Q ss_pred HHH
Q 045708 378 VAQ 380 (1196)
Q Consensus 378 l~~ 380 (1196)
+..
T Consensus 170 ~~~ 172 (186)
T 3as5_A 170 ANE 172 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 63
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=81.76 E-value=3.3 Score=40.53 Aligned_cols=76 Identities=13% Similarity=0.249 Sum_probs=54.8
Q ss_pred eEEEeCCCCcEEEEeeCCCcceEEecccEEEEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEE
Q 045708 690 NISVVPPLPLLVSNVVGGDGAIILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVI 769 (1196)
Q Consensus 690 ~i~VIp~qP~L~i~~ts~~~~vmLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t 769 (1196)
.+-++-+.|-|.+.++ .+-.+-.|+..+|+++++|.|..++....+.+.... .+. .. ....|.||++.+
T Consensus 9 n~~~~~~~pDL~V~is---~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng--~~v--~t----~~v~La~G~s~t 77 (127)
T 3idu_A 9 NLATTFEFPDLTVEIK---GPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYING--TLY--KN----WTVSLGPKEEKV 77 (127)
T ss_dssp CC--CCSSCCEEEEEE---SCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETT--EEE--EE----EEEEECTTCEEE
T ss_pred eEeeeccCCCeEEEec---CCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECC--EEE--ee----EEeccCCCCeEE
Confidence 3556789999999665 345889999999999999999999988887774311 111 00 122589999999
Q ss_pred EEEEEEE
Q 045708 770 IPVTLKA 776 (1196)
Q Consensus 770 ~~i~v~g 776 (1196)
+.+....
T Consensus 78 v~f~~~~ 84 (127)
T 3idu_A 78 LTFNWTP 84 (127)
T ss_dssp EEEEECC
T ss_pred EEEEEEc
Confidence 9888654
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=81.52 E-value=5.7 Score=39.91 Aligned_cols=128 Identities=11% Similarity=-0.049 Sum_probs=80.9
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCC
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPD 300 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~ 300 (1196)
.+|..++..|+|.+|+..|.+|+. .+ +.++-.++.+.+ ..+ .+.+|+..|.++..
T Consensus 11 ~~g~~~~~~~~~~~A~~~~~~a~~----~~-----~~~~~~lg~~~~--~~g------------~~~~A~~~~~~al~-- 65 (213)
T 1hh8_A 11 NEGVLAADKKDWKGALDAFSAVQD----PH-----SRICFNIGCMYT--ILK------------NMTEAEKAFTRSIN-- 65 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSSS----CC-----HHHHHHHHHHHH--HTT------------CHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhCCHHHHHHHHHHHcC----CC-----hHHHHHHHHHHH--HcC------------CHHHHHHHHHHHHH--
Confidence 468999999999999999999851 11 223333321111 111 15556666665431
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCC----------CHHHHHHHHHHHHHHhccCCchhh
Q 045708 301 NAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLI----------DASDRLILYIEIARLFGTLDYQRK 370 (1196)
Q Consensus 301 n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll----------~~~dqi~i~~~lA~vy~~LGf~RK 370 (1196)
..|. ..++...++..+...+...++.+.+.+++....... ...+...++..+|.+|..+|-..+
T Consensus 66 ---~~~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 139 (213)
T 1hh8_A 66 ---RDKH---LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK 139 (213)
T ss_dssp ---HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred ---hCcc---chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH
Confidence 0011 147788888888888888888888888765421110 112456788899999999998877
Q ss_pred HHHHHHHHH
Q 045708 371 AAFFSRQVA 379 (1196)
Q Consensus 371 ~AF~lR~l~ 379 (1196)
+.-+++.++
T Consensus 140 A~~~~~~al 148 (213)
T 1hh8_A 140 AEEQLALAT 148 (213)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776666543
No 65
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=81.34 E-value=3.7 Score=48.27 Aligned_cols=82 Identities=11% Similarity=-0.058 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhhcCC--CCCCCCCCCchhhHHHHHHHHHHHhhc--------cchHHHHHHHHhhccCCCCCCCHHHHHH
Q 045708 284 FRYNSVILHYRKSFI--PDNAQRVSPLSFELEATLKLARFLCRR--------ELAKDVVELLTSAADGAKSLIDASDRLI 353 (1196)
Q Consensus 284 ~~~~~ai~lY~ks~~--p~n~e~~p~l~~~~Ea~Lr~a~~L~~~--------~~~~ei~~~L~~a~~~~~~ll~~~dqi~ 353 (1196)
.++.+|+..|+++.. |.+ .++...++..+... +...++.+.+.+++..... ..+...
T Consensus 193 g~~~~A~~~~~~al~~~p~~----------~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~ 259 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLD----------GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK---ASSNPD 259 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG---GGGCHH
T ss_pred hhHHHHHHHHHHHHHhCCCC----------HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC---cccCHH
Confidence 457888888887642 111 34555666666555 6677888888887653110 124567
Q ss_pred HHHHHHHHhccCCchhhHHHHHHHH
Q 045708 354 LYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 354 i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
.+..+|.+|..+|-..++.-.++.+
T Consensus 260 ~~~~lg~~~~~~g~~~~A~~~~~~a 284 (474)
T 4abn_A 260 LHLNRATLHKYEESYGEALEGFSQA 284 (474)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 8888888888888777666555554
No 66
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=80.86 E-value=5.7 Score=36.57 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=59.7
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
.+.+|+.++..|+|.+|+..|..|+..-.. +- .++-.++ |..-+ + .+.+|+..|.++.
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~-----~~~~~~a~~~~~~---~------------~~~~A~~~~~~al 65 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DA-----RGYSNRAAALAKL---M------------SFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CH-----HHHHHHHHHHHHT---T------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-Ch-----HHHHHHHHHHHHh---c------------CHHHHHHHHHHHH
Confidence 456799999999999999999999986432 21 2222222 21111 1 1556666666553
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 298 IPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 298 ~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 66 ~-----~~p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 66 E-----KDPN---FVRAYIRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp H-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred H-----hCCC---cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 1 0011 1467788888888888888888888776543
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=80.77 E-value=16 Score=34.52 Aligned_cols=98 Identities=14% Similarity=-0.005 Sum_probs=61.6
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
.......+|..++..|+|..|+..|..|+...... +.++-.++ |..-. + .+.+|+..|
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~~a~~~~~~---~------------~~~~A~~~~ 70 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLRT---E------------CYGYALGDA 70 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHT---T------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHc---C------------CHHHHHHHH
Confidence 34566778999999999999999999999864322 22222222 11111 1 145555555
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.++.. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 71 ~~a~~-----~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 71 TRAIE-----LDKK---YIKGYYRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHH-----hCcc---cHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 55431 0011 1467778888888888888888888777643
No 68
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=80.74 E-value=2.4 Score=47.60 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=65.5
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHH-----------hHHHHH-HHHhhhccCCCchhhHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAG-----------ALEGSV-CALLVDRMGQKDAVLEEEV 282 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAs-----------ALEGi~-~~llL~~~~~~~~~~~~ei 282 (1196)
.....+.+|+.++..|+|.+|+..|..|+........+.+++. ++-.++ |..- .+
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~---~g---------- 244 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK---LK---------- 244 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT---TT----------
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH---cC----------
Confidence 3455778999999999999999999999986543322223322 111111 1111 11
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 283 KFRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 283 ~~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
++.+|+..|.++.. ..|. ..++..+++..+...+...++.+.+.+++..
T Consensus 245 --~~~~A~~~~~~al~-----~~p~---~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 245 --RYDEAIGHCNIVLT-----EEEK---NPKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp --CCHHHHHHHHHHHH-----HCTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred --CHHHHHHHHHHHHH-----hCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 14455555555431 0001 1478889999999888889999999988654
No 69
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.43 E-value=2.9 Score=40.14 Aligned_cols=58 Identities=14% Similarity=0.054 Sum_probs=43.2
Q ss_pred EecccEEEEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEEcccC
Q 045708 713 LYEGEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKAWQHG 780 (1196)
Q Consensus 713 LleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g 780 (1196)
..-|++++.++.|+|.|..|+.| ++.. ...|.++ +....|+||++.++.+.....+.|
T Consensus 37 ~~v~~~~~~~~~l~N~g~~~~~f---~~~~---~~~F~i~----P~~g~L~pg~~~~i~V~F~P~~~g 94 (122)
T 2ys4_A 37 CPVKYSTQKILLVRNIGNKNAVF---HIKT---CRPFSIE----PAIGTLNVGESMQLEVEFEPQSVG 94 (122)
T ss_dssp EESSSCEEEEEEEECCSSSCEEE---EEEC---CTTEEEE----SSEEEECTTCEEEEEEEECCSSSB
T ss_pred eecCCeEEEEEEEEECCCCCEEE---EEec---CCCeEEE----CCcCEECCCCEEEEEEEEEcCCCc
Confidence 45588999999999999999865 3332 2234443 345789999999999999994444
No 70
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.07 E-value=20 Score=36.21 Aligned_cols=63 Identities=8% Similarity=0.136 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHH
Q 045708 312 LEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 312 ~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
.++...++..+...+...++.+.+.++..... +....+..+|.+|...|-..++.-+++.+..
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 221 (243)
T 2q7f_A 159 TEARFQFGMCLANEGMLDEALSQFAAVTEQDP------GHADAFYNAGVTYAYKENREKALEMLDKAID 221 (243)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHc
Confidence 35666777777777777777777776654311 1244677888888888888887777766543
No 71
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=79.85 E-value=4.8 Score=41.55 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=79.6
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccC-CchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLT-ADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~-~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
..+|..++..|++.+|+..|..|+..--.. .-|.++|.++. ..+ ++.+|+..|.+...
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~---------~~g------------~~~~A~~~~~~al~ 67 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQL---------KLG------------LVNPALENGKTLVA 67 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH---------HTT------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---------HcC------------CHHHHHHHHHHHHH
Confidence 457899999999999999999998632111 11222333222 111 15667777766542
Q ss_pred --CCCCCCCCCchhhHHHHHHHHHHHhhc-----------cchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccC
Q 045708 299 --PDNAQRVSPLSFELEATLKLARFLCRR-----------ELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTL 365 (1196)
Q Consensus 299 --p~n~e~~p~l~~~~Ea~Lr~a~~L~~~-----------~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~L 365 (1196)
|.+ .++...++..+... +...++.+.+.+++.... +....+..++.+|...
T Consensus 68 ~~P~~----------~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P------~~~~~~~~lg~~~~~~ 131 (217)
T 2pl2_A 68 RTPRY----------LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNP------RYAPLHLQRGLVYALL 131 (217)
T ss_dssp HCTTC----------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHT
T ss_pred hCCCc----------HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHc
Confidence 211 36666777777776 777888888887764322 2345677888888888
Q ss_pred CchhhHHHHHHHHHH
Q 045708 366 DYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 366 Gf~RK~AF~lR~l~~ 380 (1196)
|-.-++.-.++.++.
T Consensus 132 g~~~~A~~~~~~al~ 146 (217)
T 2pl2_A 132 GERDKAEASLKQALA 146 (217)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHh
Confidence 888777766666543
No 72
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=79.69 E-value=6.8 Score=38.30 Aligned_cols=68 Identities=21% Similarity=0.304 Sum_probs=56.1
Q ss_pred eEEecCeEEEEEEEECCCcceEEEeEEEEEeecceeeeeeeeEEECCCCeeEEEEEEEeCeeeeEEEceE
Q 045708 573 IWVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPISVELPPNSSKVITLSGIPTSVGPVTIPGC 642 (1196)
Q Consensus 573 ~~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~G~ 642 (1196)
....|+.++|.++++|==.-+..=-.+.|..+|...... .+.|+|+++.++.+..+|+..|...|...
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~v~t~--~v~La~G~s~tv~f~~~~~~~G~~~v~Av 95 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKVRVYINGTLYKNW--TVSLGPKEEKVLTFNWTPTQEGMYRINAT 95 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEEE--EEEECTTCEEEEEEEECCSSCEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEEEEEECCEEEeeE--EeccCCCCeEEEEEEEEcCCCcEEEEEEE
Confidence 467899999999999988888777777887788655444 34699999999999999999999877543
No 73
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=78.58 E-value=6.1 Score=39.11 Aligned_cols=92 Identities=8% Similarity=0.009 Sum_probs=64.3
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC-
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI- 298 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~- 298 (1196)
-.+|..++..|+|.+|+..|..|+.+ ...+-..|++-+. |... .+ ++.+|+..|.++..
T Consensus 40 ~~lg~~~~~~g~~~eA~~~~~~al~~-~P~~~~~~~~lg~----~~~~---~g------------~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 40 YSYAYDFYNKGRIEEAEVFFRFLCIY-DFYNVDYIMGLAA----IYQI---KE------------QFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHH----HHHH---TT------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHH----HHHH---Hc------------cHHHHHHHHHHHHhh
Confidence 45788999999999999999999975 3344455543211 1111 11 27788888887652
Q ss_pred -CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 299 -PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 299 -p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
|.+ .++...++..+...+...++.+.+.+++..
T Consensus 100 ~P~~----------~~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 100 GKND----------YTPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp SSSC----------CHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCC----------cHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 222 367788888888888888898888887654
No 74
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=78.18 E-value=9.9 Score=39.13 Aligned_cols=137 Identities=12% Similarity=-0.056 Sum_probs=87.2
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCC-chhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTA-DYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~-D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
....+|..++..|++.+|+..|..|+.+--... -|..+|.++...- .... .. .....++.+|+..|.++
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~-----~~~~--~~---~~~~g~~~~A~~~~~~a 110 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALY-----RQAE--DR---ERGKGYLEQALSVLKDA 110 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-----HTCS--SH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh-----hhhh--hh---cccccCHHHHHHHHHHH
Confidence 345689999999999999999999997532211 1222333332210 0000 00 01124578888888886
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHH
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSR 376 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR 376 (1196)
.. ..|. ..++...++..+...+...++.+.+.+++... +...++..++.+|...|=.-++.-..+
T Consensus 111 l~-----~~P~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~ 175 (217)
T 2pl2_A 111 ER-----VNPR---YAPLHLQRGLVYALLGERDKAEASLKQALALE-------DTPEIRSALAELYLSMGRLDEALAQYA 175 (217)
T ss_dssp HH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HH-----hCcc---cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-------cchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 52 0111 24677888888888888889999998886543 234567788888888887766655555
Q ss_pred HHH
Q 045708 377 QVA 379 (1196)
Q Consensus 377 ~l~ 379 (1196)
.++
T Consensus 176 ~al 178 (217)
T 2pl2_A 176 KAL 178 (217)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 75
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=77.89 E-value=4.2 Score=38.37 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=46.6
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhcc-CCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARL-TADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~-~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
--+|..|+..|+|.+|+..|..|+++-.. ..+|...|.++-.+. +..-+. .+.+|+..|.++.
T Consensus 46 ~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~---------------~~~~A~~~~~kal 110 (127)
T 4gcn_A 46 NNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQN---------------DLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT---------------CHHHHHHHHHHHH
T ss_pred HhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcC---------------CHHHHHHHHHHHH
Confidence 34799999999999999999999998755 467888888887664 222221 2667777777754
No 76
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=77.51 E-value=24 Score=34.94 Aligned_cols=130 Identities=12% Similarity=0.022 Sum_probs=79.7
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhcc-CCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRM-GQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~-~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
....+|..++..|++.+|+..|..++..... +...|. .++. ++. .. + .+.+|+..|.+.
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~-----~l~~-~~~-~~~~------------~~~~A~~~~~~~ 103 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINN-----NYGW-FLC-GRLN------------RPAESMAYFDKA 103 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHH-----HHHH-HHH-TTTC------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHH-----HHHH-HHH-HhcC------------cHHHHHHHHHHH
Confidence 4566899999999999999999999976432 222221 1111 111 11 1 145566666655
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHH
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSR 376 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR 376 (1196)
.. . ...+ -..++...++..+...+...++.+.+.++..... +....+..+|.+|...|-..++.-+++
T Consensus 104 ~~--~--~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~ 171 (225)
T 2vq2_A 104 LA--D--PTYP--TPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP------QFPPAFKELARTKMLAGQLGDADYYFK 171 (225)
T ss_dssp HT--S--TTCS--CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred Hc--C--cCCc--chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 32 0 0011 1246677788888877877888888777654321 124567778888888887777666666
Q ss_pred HHH
Q 045708 377 QVA 379 (1196)
Q Consensus 377 ~l~ 379 (1196)
.+.
T Consensus 172 ~~~ 174 (225)
T 2vq2_A 172 KYQ 174 (225)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 77
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=77.50 E-value=9.8 Score=41.46 Aligned_cols=64 Identities=8% Similarity=-0.011 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCH-----HHHHHHHHHHHHHhccCCchhhHHHHHH
Q 045708 313 EATLKLARFLCRRELAKDVVELLTSAADGAKSLIDA-----SDRLILYIEIARLFGTLDYQRKAAFFSR 376 (1196)
Q Consensus 313 Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~-----~dqi~i~~~lA~vy~~LGf~RK~AF~lR 376 (1196)
++...++..+...+...++.+.+.+++.......++ .+...++..++.+|..+|-.-++.-+.+
T Consensus 286 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 354 (368)
T 1fch_A 286 RSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADA 354 (368)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHH
Confidence 555666666666666666666666554331111100 1124566667777777766655544444
No 78
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=77.24 E-value=7.8 Score=36.44 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=54.5
Q ss_pred CcEEEEeeCCCcceEEecccEEEEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEEc
Q 045708 698 PLLVSNVVGGDGAIILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKAW 777 (1196)
Q Consensus 698 P~L~i~~ts~~~~vmLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~ 777 (1196)
|.|.+++.. .+ --|+....+|+++|-=..|+....|++..+-=..-..++. ..|.||+++++.+.+..+
T Consensus 6 P~i~I~v~g--~~---~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~------~~v~pg~~~~~~~~~~P~ 74 (102)
T 2xzz_A 6 SMLSLTLLG--AA---VVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNV------GDIGGNETVTLRQSFVPV 74 (102)
T ss_dssp CEEEEEESS--CC---CSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEEE------CCBCTTCEEEEEEEECCC
T ss_pred CcEEEEECC--Cc---ccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEEc------CcCCCCCEEEEEEEEecC
Confidence 556666652 11 2388899999999999999999999998742111133332 369999999999999998
Q ss_pred ccCC
Q 045708 778 QHGP 781 (1196)
Q Consensus 778 k~g~ 781 (1196)
++|.
T Consensus 75 ~~G~ 78 (102)
T 2xzz_A 75 RPGP 78 (102)
T ss_dssp SCSS
T ss_pred cccc
Confidence 9986
No 79
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=76.88 E-value=21 Score=31.78 Aligned_cols=99 Identities=16% Similarity=0.090 Sum_probs=60.3
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
.......+|..++..|+|.+|+..|..++..... +. .++-.++.+.+. .+ .+.+|+..|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~-----~~~~~~a~~~~~--~~------------~~~~A~~~~~ 70 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NA-----VYFCNRAAAYSK--LG------------NYAGAVQDCE 70 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CH-----HHHHHHHHHHHH--TT------------CHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CH-----HHHHHHHHHHHH--hh------------chHHHHHHHH
Confidence 3456677899999999999999999999976432 21 222222211111 11 1445555555
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
++.. ..|. ..++...++..+...+...++.+.+.++...
T Consensus 71 ~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 71 RAIC-----IDPA---YSKAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHh-----cCcc---CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 5431 0011 1367778888888888788888888776543
No 80
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=76.78 E-value=14 Score=40.55 Aligned_cols=31 Identities=10% Similarity=-0.017 Sum_probs=21.8
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
.....+|.++...|++.+|+..|..|+....
T Consensus 134 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 164 (365)
T 4eqf_A 134 KALMALAVSYTNTSHQQDACEALKNWIKQNP 164 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhCc
Confidence 3455667777777777777777777776543
No 81
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=76.58 E-value=31 Score=35.98 Aligned_cols=98 Identities=12% Similarity=0.014 Sum_probs=58.7
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
.-.+|..++..|+|.+|+..|..++... .+.-|.+.|+=.++ |..-.. .+.+|+..|.+..
T Consensus 18 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~---p~~~~~~~a~~~lg~~~~~~~---------------~~~~A~~~~~~~l 79 (261)
T 3qky_A 18 AFERAMEFYNQGKYDRAIEYFKAVFTYG---RTHEWAADAQFYLARAYYQNK---------------EYLLAASEYERFI 79 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHGGGC---SCSTTHHHHHHHHHHHHHHTT---------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC---CCCcchHHHHHHHHHHHHHhC---------------cHHHHHHHHHHHH
Confidence 3457889999999999999999987633 33334344444433 222221 1455555555543
Q ss_pred C--CCCCCCCCCchhhHHHHHHHHHHHhh--------ccchHHHHHHHHhhccC
Q 045708 298 I--PDNAQRVSPLSFELEATLKLARFLCR--------RELAKDVVELLTSAADG 341 (1196)
Q Consensus 298 ~--p~n~e~~p~l~~~~Ea~Lr~a~~L~~--------~~~~~ei~~~L~~a~~~ 341 (1196)
. |.+ + ...++...++..+.. .+...++.+.+.+++..
T Consensus 80 ~~~p~~-----~--~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~ 126 (261)
T 3qky_A 80 QIYQID-----P--RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR 126 (261)
T ss_dssp HHCTTC-----T--THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHCCCC-----c--hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH
Confidence 1 111 1 124677778877766 67777777777776543
No 82
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=76.50 E-value=3 Score=51.53 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=50.0
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceeeeeeee---EEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPIS---VELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes~~~s---i~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
.++|+++.+.|+|+|||.+.| ++..|..||.-...-+.. =.|+|+.+..+++.++|+.+|.=+|.
T Consensus 604 ~~v~~~l~v~v~f~NPL~~~L--~~c~~~vEG~GL~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~ 671 (692)
T 1vjj_A 604 ARVRKPVNVQMLFSNPLDEPV--RDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLL 671 (692)
T ss_dssp CBTTSCEEEEEEEECCSSSCB--CSEEEEEECTTTSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred cccCCeEEEEEEEECCCCCcc--cceEEEEECCCCCCCceEEEcCccCCCCEEEEEEEEEeccccceEEE
Confidence 478999999999999998876 466666666544322111 34899999999999999999997663
No 83
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.41 E-value=44 Score=37.38 Aligned_cols=153 Identities=14% Similarity=0.055 Sum_probs=100.0
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
......+|.++...|.+..|+..|.+++..++..++..-.+.+.-.++ .+..+. ++ + .+....+.+++....+
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~~~~~-g~--~---~~A~~~l~~~~~~~~~ 167 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLA-TLHYQK-KQ--Y---KDSLALINDLLREFKK 167 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHH-HHHHHH-TC--H---HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHH-HHHHHc-cC--h---HHHHHHHHHHHHHHHh
Confidence 345667899999999999999999999999988776554444433332 222221 11 0 2333345555555444
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCC-CCCHHHHHHHHHHHHHHhccCCchhhHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKS-LIDASDRLILYIEIARLFGTLDYQRKAAFF 374 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~-ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~ 374 (1196)
.. +. + ..+|+.+..+++....+...++...+.++...... .-+...+..++..+..+|...|-.-++.-+
T Consensus 168 ~~--~~-----~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~ 238 (434)
T 4b4t_Q 168 LD--DK-----P--SLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSY 238 (434)
T ss_dssp SS--CS-----T--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHH
T ss_pred cc--cc-----h--hHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 32 11 1 23688888888888777776676666665544211 122355778888889999999999998888
Q ss_pred HHHHHHHHHh
Q 045708 375 SRQVAQLYLQ 384 (1196)
Q Consensus 375 lR~l~~~lv~ 384 (1196)
.+++...+-.
T Consensus 239 ~~~a~~~~~~ 248 (434)
T 4b4t_Q 239 FFESFESYHN 248 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 8887766643
No 84
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=76.39 E-value=13 Score=43.68 Aligned_cols=98 Identities=14% Similarity=0.010 Sum_probs=73.8
Q ss_pred cCChHHHHHHHHHHHHHhcc--CCchhhHHHhHHHHHHHH-hhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045708 229 AGSPVDANAHYSTALELARL--TADYFWYAGALEGSVCAL-LVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDNAQRV 305 (1196)
Q Consensus 229 aG~~~DAL~~Y~eAi~~lk~--~~D~LWlAsALEGi~~~l-lL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n~e~~ 305 (1196)
.|+|.+|+..|..|+++..+ ..||...|.++..++.+. -.-++ ++....+.+++..|.+...+.+
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~--------~eA~~~~~~aL~i~~~~lG~~H---- 378 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDW--------EGALKYGQKIIKPYSKHYPVYS---- 378 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHHSCSSC----
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCH--------HHHHHHHHHHHHHHHHHcCCCC----
Confidence 48999999999999999876 689999999999885332 22222 4666678889999988764322
Q ss_pred CCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 306 SPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 306 p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
|- + .-+..++|..+..++...++.+++.+|+.+
T Consensus 379 -p~-~-a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 379 -LN-V-ASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp -HH-H-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -hH-H-HHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 21 1 367778999998899888888888887654
No 85
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=75.97 E-value=7.8 Score=37.57 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=54.8
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCC
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIP 299 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p 299 (1196)
.+|.+|+..|+|..|+++|..|+++-- .+- .|+-.++ |.. ..+ .+.+|+..|+++..
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p-~~~-----~a~~~lg~~~~---~~~------------~~~~A~~~~~~al~- 93 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQE-RDP-----KAHRFLGLLYE---LEE------------NTDKAVECYRRSVE- 93 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT-TCH-----HHHHHHHHHHH---HTT------------CHHHHHHHHHHHHH-
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC-CCH-----HHHHHHHHHHH---HcC------------chHHHHHHHHHHHH-
Confidence 579999999999999999999997532 222 2222222 111 111 25667777776542
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHH-HHhhcc
Q 045708 300 DNAQRVSPLSFELEATLKLARFLCRRELAKDVVEL-LTSAAD 340 (1196)
Q Consensus 300 ~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~-L~~a~~ 340 (1196)
-.|. ..++...++.++...+...++++. +.+++.
T Consensus 94 ----~~p~---~~~~~~~la~~~~~~~~~~~aa~~~~~~al~ 128 (150)
T 4ga2_A 94 ----LNPT---QKDLVLKIAELLCKNDVTDGRAKYWVERAAK 128 (150)
T ss_dssp ----HCTT---CHHHHHHHHHHHHHHCSSSSHHHHHHHHHHH
T ss_pred ----hCCC---CHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 0011 247888899888876665555543 445543
No 86
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.68 E-value=7.6 Score=37.18 Aligned_cols=59 Identities=19% Similarity=0.090 Sum_probs=48.0
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceeeeeeeeEEECCCCeeEEEEEEEeCeeee
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPISVELPPNSSKVITLSGIPTSVGP 636 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes~~~si~L~P~S~~~I~Lsg~P~~~G~ 636 (1196)
+.+|+..+..++|+|-=..+... ++... ..|.-.|...+|+|++..+|++++.|++.|.
T Consensus 37 ~~v~~~~~~~~~l~N~g~~~~~f---~~~~~-~~F~i~P~~g~L~pg~~~~i~V~F~P~~~g~ 95 (122)
T 2ys4_A 37 CPVKYSTQKILLVRNIGNKNAVF---HIKTC-RPFSIEPAIGTLNVGESMQLEVEFEPQSVGD 95 (122)
T ss_dssp EESSSCEEEEEEEECCSSSCEEE---EEECC-TTEEEESSEEEECTTCEEEEEEEECCSSSBC
T ss_pred eecCCeEEEEEEEEECCCCCEEE---EEecC-CCeEEECCcCEECCCCEEEEEEEEEcCCCcc
Confidence 78999999999999965544443 12222 4798899999999999999999999999876
No 87
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=75.61 E-value=14 Score=35.70 Aligned_cols=97 Identities=13% Similarity=0.016 Sum_probs=62.1
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
......+|..++..|+|.+|+..|..|+.+-.. +-. ++-.++ |..-+ + ++.+|+..|.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~-----~~~~l~~~~~~~---g------------~~~~A~~~~~ 69 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPI-----YLSNRAAAYSAS---G------------QHEKAAEDAE 69 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHH-----HHHHHHHHHHHT---T------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHH-----HHHHHHHHHHHc---c------------CHHHHHHHHH
Confidence 345567899999999999999999999986432 222 222222 21111 1 1556666666
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
++.. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 70 ~al~-----~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 70 LATV-----VDPK---YSKAWSRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHH-----hCCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 6531 0011 1467778888888888888888888776644
No 88
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=75.26 E-value=25 Score=36.06 Aligned_cols=146 Identities=10% Similarity=0.003 Sum_probs=76.2
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCc----hhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTAD----YFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D----~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
.-.+|..++..|+|.+|+..|..++...-...+ +.|+|.++....-. .+..+...... ..-...+.+|+..|+
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS-ALQGFFGVDRS--DRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC-----------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhh-hhhhhhccchh--hcCcHHHHHHHHHHH
Confidence 345789999999999999999999976544332 45666665432100 00000000000 000124677888887
Q ss_pred hcCC--CCCCCCCCCchhhHHHH--------------HHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 045708 295 KSFI--PDNAQRVSPLSFELEAT--------------LKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEI 358 (1196)
Q Consensus 295 ks~~--p~n~e~~p~l~~~~Ea~--------------Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~l 358 (1196)
+... |.+. . ..++. +.++.++..++...++.+.+.+++..... . ......+..+
T Consensus 121 ~~l~~~P~~~----~---a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~-~--~~~~~a~~~l 190 (225)
T 2yhc_A 121 KLVRGYPNSQ----Y---TTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPD-T--QATRDALPLM 190 (225)
T ss_dssp HHHTTCTTCT----T---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-S--HHHHHHHHHH
T ss_pred HHHHHCcCCh----h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcC-C--CccHHHHHHH
Confidence 7653 2221 1 11222 33455555566666777776665533111 0 1223456667
Q ss_pred HHHhccCCchhhHHHHHHH
Q 045708 359 ARLFGTLDYQRKAAFFSRQ 377 (1196)
Q Consensus 359 A~vy~~LGf~RK~AF~lR~ 377 (1196)
+.+|..+|-.-++.=+++.
T Consensus 191 ~~~~~~~g~~~~A~~~~~~ 209 (225)
T 2yhc_A 191 ENAYRQMQMNAQAEKVAKI 209 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHHHHHH
Confidence 7777777776665544443
No 89
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=75.24 E-value=10 Score=34.33 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=57.5
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
+....+|..++..|+|.+|+..|..|+..... + +.++-.++.+. . ..+ .+.+|+..|.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~-----~~~~~~la~~~-~-~~~------------~~~~A~~~~~~a 76 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-D-----AKLYSNRAACY-T-KLL------------EFQLALKDCEEC 76 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-C-----HHHHHHHHHHH-T-TTT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-c-----HHHHHHHHHHH-H-Hhc------------cHHHHHHHHHHH
Confidence 34455799999999999999999999864321 1 22222332111 1 111 134445555443
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 77 ~~-----~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 77 IQ-----LEPT---FIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HH-----hCCC---chHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 21 0001 1467777888888777778888888776543
No 90
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=75.12 E-value=5 Score=39.75 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=41.7
Q ss_pred EecccEEEEEEEEEeccccccceEEEEEecCC-----CcceEEEeccccccccCCCCCCEEEEEEEEEE
Q 045708 713 LYEGEIRDVWISLANAGTVPVEQAHISLSGKN-----QDSIISIASETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 713 LleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~-----~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
+.=|+.++-+|+|.|+|.+|+.| +|..+. ..+.+.++ +....|+||+++.+.+++.-
T Consensus 39 v~~~~~~~~~l~I~Ntg~vpa~F---~f~~~~~~~~~~~~wl~v~----P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 39 VKFRQLQKEKFQISNNGQVPCHF---SFIPKLNDSQYCKPWLRAE----PFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp ECBTCCEEEEEEEEECSSSCEEE---EEECCTTCSSSSCTTEEEE----SCEEEECTTCEEEEEEEECB
T ss_pred ceeeeeeeeEEEEEcCCccceEE---EEecCCCchhhhhHhhhcC----CcccccCCCCeeEEEEEEEE
Confidence 56678889999999999999965 443321 11223332 55679999999999999985
No 91
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=74.72 E-value=12 Score=33.98 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=58.4
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC--
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI-- 298 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~-- 298 (1196)
.+|..++..|+|.+|+..|..++.... +..|.+.++-.++.+.+- .+ .+.+|+..|.+...
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~~~~~lg~~~~~--~~------------~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYP---NGVYTPNALYWLGESYYA--TR------------NFQLAEAQFRDLVSRY 69 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCS---SSTTHHHHHHHHHHHHHH--TT------------CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCC---CCcccHHHHHHHHHHHHH--hc------------cHHHHHHHHHHHHHHC
Confidence 468889999999999999999887543 333333333333211111 11 14555555555431
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhcc
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAAD 340 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~ 340 (1196)
|.+ ....++.+.++..+...+...++.+.+.+++.
T Consensus 70 p~~-------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 70 PTH-------DKAAGGLLKLGLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp TTS-------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCC-------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 111 11247788888888887877778777776653
No 92
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=74.59 E-value=14 Score=39.29 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=74.2
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
.+....+|..+...|++.+|+..|..++..... +...| -.++.+. . ..+ ++++|+..|.+
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~-----~~l~~~~-~-~~~------------~~~~A~~~~~~ 231 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLW-----NKLGATL-A-NGN------------RPQEALDAYNR 231 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHH-----HHHHHHH-H-HTT------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHH-----HHHHHHH-H-HcC------------CHHHHHHHHHH
Confidence 455666777777888888888888877765321 11111 1111110 0 111 14555555555
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHH------HHHHHHHHHHHHhccCCchh
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDAS------DRLILYIEIARLFGTLDYQR 369 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~------dqi~i~~~lA~vy~~LGf~R 369 (1196)
+.. ..|. ..++...++..+...+...++.+.+.++........... .....+..++.+|..+|-..
T Consensus 232 a~~-----~~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 303 (327)
T 3cv0_A 232 ALD-----INPG---YVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPD 303 (327)
T ss_dssp HHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHH
T ss_pred HHH-----cCCC---CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHH
Confidence 421 0011 135666777777777777777777776654321111111 15667788888888888777
Q ss_pred hHHHHHHHH
Q 045708 370 KAAFFSRQV 378 (1196)
Q Consensus 370 K~AF~lR~l 378 (1196)
++.-+.+.+
T Consensus 304 ~A~~~~~~~ 312 (327)
T 3cv0_A 304 LVELTYAQN 312 (327)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHHHH
Confidence 766665543
No 93
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=73.79 E-value=3.2 Score=42.86 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=44.0
Q ss_pred EEEEEEEECCCcceEEEeEEEE--Eeecceeee--eeeeEEECCCCeeEEEEEEEeC
Q 045708 580 VQVLVELANPCGFDLRVDSIYL--SVHSGNFDA--FPISVELPPNSSKVITLSGIPT 632 (1196)
Q Consensus 580 ~ev~VtLqNPf~feL~I~sI~L--~teGv~Fes--~~~si~L~P~S~~~I~Lsg~P~ 632 (1196)
..+.+.++||..|+|.|..|.. ..+|..|-+ .+...+||++++.++.++++-.
T Consensus 64 ~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv~v~ 120 (174)
T 1yyc_A 64 YHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVA 120 (174)
T ss_dssp EEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEEEES
T ss_pred EEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEEEEE
Confidence 5678999999999999999986 456888875 5677999999999999888653
No 94
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=73.26 E-value=18 Score=37.53 Aligned_cols=125 Identities=13% Similarity=0.155 Sum_probs=61.5
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIP 299 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p 299 (1196)
..+|+.++..|+|.+|+..|..++..-.... ..|..-|. |..- .+ .+.+|+..|.++..
T Consensus 7 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~----~~~~---~~------------~~~~A~~~~~~a~~- 65 (272)
T 3u4t_A 7 FRYADFLFKNNNYAEAIEVFNKLEAKKYNSP-YIYNRRAV----CYYE---LA------------KYDLAQKDIETYFS- 65 (272)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS-TTHHHHHH----HHHH---TT------------CHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-HHHHHHHH----HHHH---Hh------------hHHHHHHHHHHHHh-
Confidence 3468888888889999988888886543221 12221111 1111 11 14445555544432
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 300 DNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 300 ~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
.. ..+. +..++...++..+...+...++.+.+.+++..... ...++..+|.+|...|-..++.-++
T Consensus 66 -~~-~~~~--~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~ 131 (272)
T 3u4t_A 66 -KV-NATK--AKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT------RLDMYGQIGSYFYNKGNFPLAIQYM 131 (272)
T ss_dssp -TS-CTTT--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred -cc-Cchh--HHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc------cHHHHHHHHHHHHHccCHHHHHHHH
Confidence 00 0011 12345555666666555555666665555433111 1134555556665555555444433
No 95
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=72.73 E-value=14 Score=35.78 Aligned_cols=91 Identities=18% Similarity=0.171 Sum_probs=60.2
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
-.+|..++..|+|.+|+..|..|+..-- .+-..|+ +++ |..- .+ ++.+|+..|.++..
T Consensus 25 ~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~-----~lg~~~~~---~g------------~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 25 YSLAFNQYQSGXYEDAHXVFQALCVLDH-YDSRFFL-----GLGACRQA---MG------------QYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHH-----HHHHHHHH---TT------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHcCc-ccHHHHH-----HHHHHHHH---Hh------------hHHHHHHHHHHHHh
Confidence 3478999999999999999999987533 3333343 222 1111 11 26667777776542
Q ss_pred --CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 299 --PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 299 --p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
|.+ .++...++..+...+...++.+.+.+++..
T Consensus 84 l~p~~----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 84 MDIXE----------PRFPFHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HSTTC----------THHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCCC----------chHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 222 366777888888888888888888877643
No 96
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=72.69 E-value=35 Score=34.32 Aligned_cols=129 Identities=16% Similarity=0.050 Sum_probs=77.3
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
......+|..++..|++.+|+..|..++..... +...| -.++.+.+ ..+ .+.+|+..|.+
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~-----~~la~~~~--~~~------------~~~~A~~~~~~ 116 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSS-AATAY-----YGAGNVYV--VKE------------MYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHH-----HHHHHHHH--HTT------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHH-----HHHHHHHH--Hhc------------cHHHHHHHHHH
Confidence 345566889999999999999999999876432 21222 22211111 111 14555566655
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
+.. ..|. ..++...++.++...+...++.+.+.++..... +....+..+|.+|...|-..++.-++
T Consensus 117 ~~~-----~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~ 182 (243)
T 2q7f_A 117 ALR-----AGME---NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE------NDTEARFQFGMCLANEGMLDEALSQF 182 (243)
T ss_dssp HHH-----HTCC---SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHH-----hCCC---CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 431 0011 135666778888777777888888777654321 12346777888888888777666665
Q ss_pred HHH
Q 045708 376 RQV 378 (1196)
Q Consensus 376 R~l 378 (1196)
+.+
T Consensus 183 ~~~ 185 (243)
T 2q7f_A 183 AAV 185 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 97
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=72.24 E-value=22 Score=32.61 Aligned_cols=96 Identities=17% Similarity=0.166 Sum_probs=59.5
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
.....+|..++..|+|.+|+..|..|+..-... +.++-.++ |..-+.. +.+|+..|.+
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~~~---------------~~~A~~~~~~ 68 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQ---------------PEQALADCRR 68 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTC---------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc------HHHHHHHHHHHHHhcC---------------HHHHHHHHHH
Confidence 345678999999999999999999999864432 12222222 2221111 4455555555
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
+.. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 69 al~-----~~p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 69 ALE-----LDGQ---SVKAHFFLGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHH-----hCch---hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 431 0011 1467778888888777777888877776543
No 98
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=72.09 E-value=1.9 Score=47.88 Aligned_cols=94 Identities=11% Similarity=-0.138 Sum_probs=60.3
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhcc---CCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARL---TADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~---~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
=++|.+++.+|+|.||+..|..+...-.. ..-++|+|.|++.+ + ++.+|+..|.+.
T Consensus 139 ~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~L---------G------------~~~eAl~~l~~a 197 (282)
T 4f3v_A 139 WMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANL---------A------------LFTEAERRLTEA 197 (282)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHT---------T------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHC---------C------------CHHHHHHHHHHH
Confidence 45667899999999999998865432111 12367777777632 2 266777777776
Q ss_pred CCCCCCCCC-CCchhhHHHHHHHHHHHhhccchHHHHHHHHhhcc
Q 045708 297 FIPDNAQRV-SPLSFELEATLKLARFLCRRELAKDVVELLTSAAD 340 (1196)
Q Consensus 297 ~~p~n~e~~-p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~ 340 (1196)
.. . .. |. ...++.+..+..|...+...++.+.|.+++.
T Consensus 198 ~~---g-~~~P~--~~~da~~~~glaL~~lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 198 ND---S-PAGEA--CARAIAWYLAMARRSQGNESAAVALLEWLQT 236 (282)
T ss_dssp HT---S-TTTTT--THHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hc---C-CCCcc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 31 0 11 22 1357888888888888877788777776543
No 99
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=72.03 E-value=31 Score=35.01 Aligned_cols=117 Identities=17% Similarity=0.069 Sum_probs=69.9
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC--
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI-- 298 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~-- 298 (1196)
.+|..++..|+|.+|++.|..|+..-. + .+.++-.++.+.. ..+ .+.+|+..|+++..
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~al~~~p---~---~~~~~~~l~~~~~--~~~------------~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 47 NCGVCADNIKKYKEAADYFDIAIKKNY---N---LANAYIGKSAAYR--DMK------------NNQEYIATLTEGIKAV 106 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTC---S---HHHHHHHHHHHHH--HTT------------CHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcHHHHHHHHHHHHHhCc---c---hHHHHHHHHHHHH--Hcc------------cHHHHHHHHHHHHHHC
Confidence 379999999999999999999996322 2 1222222321111 111 14555555655431
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHH--HHHHHHHHHHHhccCC
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASD--RLILYIEIARLFGTLD 366 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~d--qi~i~~~lA~vy~~LG 366 (1196)
|.+.. ......++...++..+...+...++.+.+.+++... .+ ....+..++.+|...|
T Consensus 107 p~~~~---~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~~l~~~~~~~~ 167 (228)
T 4i17_A 107 PGNAT---IEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT------SKKWKTDALYSLGVLFYNNG 167 (228)
T ss_dssp TTCHH---HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHH---HHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC------CCcccHHHHHHHHHHHHHHH
Confidence 21110 001123567777788878888889999999886542 13 4567777887775544
No 100
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.36 E-value=1.9 Score=40.43 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=42.7
Q ss_pred EEecccEEEEEEEEEeccccccceEEEEEecCCCc--ceEEEeccccccccCCCCCCEEEEEEEEEEcccC
Q 045708 712 ILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQD--SIISIASETLKSALPLKPGAEVIIPVTLKAWQHG 780 (1196)
Q Consensus 712 mLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~--~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g 780 (1196)
.+..|+..+.+++|+|+|.+|+.|- +...... ..+.++ +...+|+||++.++.+...+-++|
T Consensus 21 ~v~~g~~~~~~~~l~N~g~~p~~~~---~~~~~~~~~~~f~v~----p~~g~i~pg~~~~i~V~f~~~~~g 84 (112)
T 2e6j_A 21 KVFTGSAHCYEAILYNKGSIDALFN---MTPPTSALGACFVFS----PKEGIIEPSGVQAIQISFSSIILG 84 (112)
T ss_dssp EEESSCCEEEEEEEEECCSSCEEEE---ECCCSSHHHHHCEEE----SSEEEECTTBCCEEEEEECCCCCE
T ss_pred eEEECCEEEEEEEEEECCcceEEEE---EecCCccccCcEEEE----CCcCEECCCCEEEEEEEEECCCcc
Confidence 3567889999999999999998543 2221111 123332 345689999999999999984444
No 101
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=70.53 E-value=51 Score=36.87 Aligned_cols=120 Identities=11% Similarity=0.063 Sum_probs=72.8
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCC
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDN 301 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n 301 (1196)
+|+.++..|+|.+|+..|..++..... +.-+...++..++. ++.+.+ ++.+|+..|.++..
T Consensus 263 ~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~--~~~~~g------------~~~~A~~~~~~a~~--- 323 (450)
T 2y4t_A 263 SAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICH--CFSKDE------------KPVEAIRVCSEVLQ--- 323 (450)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHH--HHHTTT------------CHHHHHHHHHHHHH---
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHH--HHHHCC------------CHHHHHHHHHHHHH---
Confidence 399999999999999999999985433 32222333332221 111221 15566666666431
Q ss_pred CCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH------------HHhccCCchh
Q 045708 302 AQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIA------------RLFGTLDYQR 369 (1196)
Q Consensus 302 ~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA------------~vy~~LGf~R 369 (1196)
..|. ..++...++..+...+...++.+.+.+++...... ..++..++ .+|..+|..|
T Consensus 324 --~~p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~~~y~~lg~~~ 392 (450)
T 2y4t_A 324 --MEPD---NVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND------QQIREGLEKAQRLLKQSQKRDYYKILGVKR 392 (450)
T ss_dssp --HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC------HHHHHHHHHHHHHHHHHHSCCSGGGSCSST
T ss_pred --hCcc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch------HHHHHHHHHHHHHhhcccchhHHHHhCCCc
Confidence 0011 13677788888888888888888888886542221 12333333 6788899766
Q ss_pred hH
Q 045708 370 KA 371 (1196)
Q Consensus 370 K~ 371 (1196)
+.
T Consensus 393 ~~ 394 (450)
T 2y4t_A 393 NA 394 (450)
T ss_dssp TC
T ss_pred cC
Confidence 54
No 102
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=70.36 E-value=4.1 Score=40.97 Aligned_cols=52 Identities=12% Similarity=0.208 Sum_probs=43.0
Q ss_pred eEEEEEEEECCCcceEEEeEEEEEe--ecceeee--eeeeEEECCCCeeEEEEEEE
Q 045708 579 PVQVLVELANPCGFDLRVDSIYLSV--HSGNFDA--FPISVELPPNSSKVITLSGI 630 (1196)
Q Consensus 579 ~~ev~VtLqNPf~feL~I~sI~L~t--eGv~Fes--~~~si~L~P~S~~~I~Lsg~ 630 (1196)
...+.+.++||..|+|.|..|...- +|..+-+ .+...+|+++++.++.++++
T Consensus 40 ~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv~ 95 (151)
T 1xo8_A 40 EYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVV 95 (151)
T ss_dssp CEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCC
T ss_pred EEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEEE
Confidence 4678899999999999999998644 5777764 56779999999998888764
No 103
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=70.06 E-value=52 Score=34.19 Aligned_cols=143 Identities=15% Similarity=0.090 Sum_probs=78.0
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
...-.+|..++..|+|.+|+..|..++...-...+ ...|+-.++ |..-.......+ ...+.+|+..|.+
T Consensus 53 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~---~~~a~~~lg~~~~~~~~~~~~~-------~~~~~~A~~~~~~ 122 (261)
T 3qky_A 53 DAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR---VPQAEYERAMCYYKLSPPYELD-------QTDTRKAIEAFQL 122 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT---HHHHHHHHHHHHHHHCCCTTSC-------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch---hHHHHHHHHHHHHHhccccccc-------chhHHHHHHHHHH
Confidence 34567899999999999999999999986432221 122222221 111100000000 1225555556555
Q ss_pred cCC--CCCCCCCCCchhhHHHH--------------HHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 045708 296 SFI--PDNAQRVSPLSFELEAT--------------LKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIA 359 (1196)
Q Consensus 296 s~~--p~n~e~~p~l~~~~Ea~--------------Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA 359 (1196)
... |.+. ...++. +.++.++...+...++.+.+.+++...... ......+..++
T Consensus 123 ~l~~~p~~~-------~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~---~~~~~a~~~l~ 192 (261)
T 3qky_A 123 FIDRYPNHE-------LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT---PWADDALVGAM 192 (261)
T ss_dssp HHHHCTTCT-------THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS---TTHHHHHHHHH
T ss_pred HHHHCcCch-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC---chHHHHHHHHH
Confidence 431 2211 111222 667777777888888888887776432111 12345667778
Q ss_pred HHhccCC----------chhhHHHHHHHHH
Q 045708 360 RLFGTLD----------YQRKAAFFSRQVA 379 (1196)
Q Consensus 360 ~vy~~LG----------f~RK~AF~lR~l~ 379 (1196)
.+|..+| =..++.-+.+.++
T Consensus 193 ~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~ 222 (261)
T 3qky_A 193 RAYIAYAEQSVRARQPERYRRAVELYERLL 222 (261)
T ss_dssp HHHHHHHHTSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccchhhcccchHHHHHHHHHHHH
Confidence 8887774 3355555555543
No 104
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=69.59 E-value=12 Score=38.34 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=69.6
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccC-CchhhHHHhH--HHHH-----HHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLT-ADYFWYAGAL--EGSV-----CALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~-~D~LWlAsAL--EGi~-----~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
.|.-++..|+|.+|+..|..|+..--.. .-|.|.+.+. +... ...+.... .++.+|+..|
T Consensus 10 ~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~------------g~~~~A~~~~ 77 (208)
T 3urz_A 10 KVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKN------------RNYDKAYLFY 77 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT------------TCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC------------CCHHHHHHHH
Confidence 5778899999999999999999754322 2244411110 0000 00000011 1267778888
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCC
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLD 366 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LG 366 (1196)
.++.. ..|. ..++...++..+...+...++.+.+.+++..... -...+..++.+|...|
T Consensus 78 ~~al~-----~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 78 KELLQ-----KAPN---NVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD------NLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHH-----HCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHH
T ss_pred HHHHH-----HCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHh
Confidence 77542 0011 1478888899888888888899888887654221 2345556666554333
No 105
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=69.47 E-value=11 Score=40.91 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=51.9
Q ss_pred ceeEEecCeEEEEEEEECCCcceEEEeEEEEEeecceeee-------eeeeEEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 571 ELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDA-------FPISVELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes-------~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
..-++.||.+++.+++.|=+.-.+++. +.|.... .|+. ....+.|+|++.+.+...++|+..|.+.|+
T Consensus 89 P~sv~rGE~~~l~~~V~Ny~~~~~~v~-V~l~~~~-~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~ 163 (252)
T 3hrz_B 89 PYSVVKNEQVEIRAILHNYVNEDIYVR-VELLYNP-AFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVE 163 (252)
T ss_dssp CSCEETTCCEEEEEEEEECSSSCEEEE-EEECCCT-TEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEE
T ss_pred CcEEeeCCEEEEEEEEEcccCceEEEE-EEEEcCC-ceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEE
Confidence 445889999999999999988877763 4444322 2332 234599999999999999999999987653
No 106
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=69.27 E-value=31 Score=38.10 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 313 EATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 313 Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
++...++..+...+...++.+.+.++..... +....+..++.+|...|-..++.-+.+.+
T Consensus 306 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 365 (388)
T 1w3b_A 306 DSLNNLANIKREQGNIEEAVRLYRKALEVFP------EFAAAHSNLASVLQQQGKLQEALMHYKEA 365 (388)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHTTSCT------TCHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5566677777777777777777777654311 22446777778888888776666555554
No 107
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=68.97 E-value=34 Score=29.74 Aligned_cols=94 Identities=16% Similarity=0.047 Sum_probs=57.3
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
...+|..++..|+|.+|+..|..++...... -..| -.++ |.... + .+.+|+..|.+..
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~-----~~~a~~~~~~---~------------~~~~A~~~~~~~~ 65 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHN-HVLY-----SNRSAAYAKK---G------------DYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHH-----HHHHHHHHHH---T------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-HHHH-----HHHHHHHHhh---c------------cHHHHHHHHHHHH
Confidence 3457899999999999999999999764322 1122 2221 11111 1 1445555555432
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 298 IPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 298 ~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
. ..|. ..++...++..+...+...++.+.+.++...
T Consensus 66 ~-----~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 66 D-----LKPD---WGKGYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp H-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred H-----hCcc---cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 1 0001 1367777888888778788888888877654
No 108
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=68.40 E-value=27 Score=37.91 Aligned_cols=31 Identities=10% Similarity=-0.116 Sum_probs=22.0
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
.....+|..+...|++.+|+..|..++....
T Consensus 133 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 163 (368)
T 1fch_A 133 TALMALAVSFTNESLQRQACEILRDWLRYTP 163 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 3455667777778888888888887776543
No 109
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=68.22 E-value=12 Score=40.58 Aligned_cols=65 Identities=14% Similarity=0.036 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHH
Q 045708 312 LEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 312 ~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
.++.+.++..+...+...++.+.+.+++..... .+....+..++.+|..+|=.-...-..|.++.
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~----~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXDLT----AADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----GGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccc----cccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 578888999999999999999998887654221 22345667778888888865555544454443
No 110
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=67.30 E-value=21 Score=33.17 Aligned_cols=93 Identities=10% Similarity=0.013 Sum_probs=58.5
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCC
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPD 300 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~ 300 (1196)
.+|..++..|+|.+|+..|..|+..-- .+...|+ .++.+. . ..+ ++.+|+..|.++..
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~P-~~~~a~~-----~lg~~~-~-~~g------------~~~~A~~~~~~al~-- 79 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKEP-EREEAWR-----SLGLTQ-A-ENE------------KDGLAIIALNHARM-- 79 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHH-----HHHHHH-H-HTT------------CHHHHHHHHHHHHH--
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCC-CCHHHHH-----HHHHHH-H-HcC------------CHHHHHHHHHHHHH--
Confidence 468899999999999999999997543 2222332 111111 1 121 25667777777542
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 301 NAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 301 n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
..|. ..++...++..+...+...++.+.+.+++..
T Consensus 80 ---l~P~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 80 ---LDPK---DIAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp ---HCTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ---hCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 0011 1467778888888877788888888776543
No 111
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=67.13 E-value=31 Score=40.90 Aligned_cols=128 Identities=13% Similarity=-0.032 Sum_probs=79.7
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
.....+|..++..|+|.+|+..|..|+..-.. + +.++-.++.+.. ..+ ++++|+..|.++
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~-----~~~~~~lg~~~~--~~g------------~~~~A~~~~~~a 83 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG-H-----PEAVARLGRVRW--TQQ------------RHAEAAVLLQQA 83 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-C-----HHHHHHHHHHHH--HTT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-C-----HHHHHHHHHHHH--HCC------------CHHHHHHHHHHH
Confidence 44566899999999999999999999874322 1 222222221111 111 155666666655
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccC---CchhhHHH
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTL---DYQRKAAF 373 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~L---Gf~RK~AF 373 (1196)
.. ..|. ..++...++..+...+...++.+.+.+++.... +....+..++.+|... |-..++.-
T Consensus 84 l~-----~~p~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~~~~g~~~~A~~ 149 (568)
T 2vsy_A 84 SD-----AAPE---HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP------EEPYITAQLLNWRRRLCDWRALDVLSA 149 (568)
T ss_dssp HH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred Hh-----cCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhhccccHHHHHH
Confidence 31 0011 146778888888888888888888888764422 1235677788888877 66655555
Q ss_pred HHHHH
Q 045708 374 FSRQV 378 (1196)
Q Consensus 374 ~lR~l 378 (1196)
.++.+
T Consensus 150 ~~~~a 154 (568)
T 2vsy_A 150 QVRAA 154 (568)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 112
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=66.76 E-value=35 Score=38.70 Aligned_cols=38 Identities=18% Similarity=-0.002 Sum_probs=32.0
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTAD 251 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D 251 (1196)
..++....+|..+.+.|++.+|+++|..|+++.+....
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~ 86 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHA 86 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCc
Confidence 45667778999999999999999999999999876543
No 113
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=66.60 E-value=54 Score=28.98 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=59.6
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
...+|..++..|+|.+|+..|..|+...... +.++-.++ +..-...+ ++....+..++.......
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~--------~~A~~~~~~~~~~~~~~~ 72 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTN------MTYITNQAAVYFEKGDY--------NKCRELCEKAIEVGRENR 72 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCH--------HHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHHHhccH--------HHHHHHHHHHHhhccccc
Confidence 4568999999999999999999999864321 12222222 11111111 233344555555554321
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 298 IPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 298 ~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
+......++...++..+...+...++.+.+.++...
T Consensus 73 --------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 73 --------EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 011112467777888887777777888887776543
No 114
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=66.33 E-value=28 Score=37.15 Aligned_cols=82 Identities=9% Similarity=0.146 Sum_probs=50.8
Q ss_pred HHHHHHHHhhcCC--CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhc
Q 045708 286 YNSVILHYRKSFI--PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFG 363 (1196)
Q Consensus 286 ~~~ai~lY~ks~~--p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~ 363 (1196)
+.+|+..|.+... |.+ + .+..++...++..+...+...++.+.+.+++.... +....+..++.+|.
T Consensus 250 ~~~A~~~~~~~~~~~~~~-----~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~~~~~~ 317 (359)
T 3ieg_A 250 YTDATSKYESVMKTEPSV-----A-EYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP------DNVNALKDRAEAYL 317 (359)
T ss_dssp HHHHHHHHHHHHHHCCSS-----H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCc-----h-HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHH
Confidence 5666677766432 111 1 12235566677777777777788888777654311 22457778888888
Q ss_pred cCCchhhHHHHHHHHH
Q 045708 364 TLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 364 ~LGf~RK~AF~lR~l~ 379 (1196)
..|-..++.-+++.++
T Consensus 318 ~~g~~~~A~~~~~~a~ 333 (359)
T 3ieg_A 318 IEEMYDEAIQDYEAAQ 333 (359)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 8887777766666543
No 115
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=66.24 E-value=6.7 Score=38.07 Aligned_cols=120 Identities=14% Similarity=0.043 Sum_probs=76.8
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccCCchhh--HHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC-
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLTADYFW--YAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI- 298 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LW--lAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~- 298 (1196)
||+++..-|.++.|+..|..|+..-. .+...| +|..+. ..+ .+++|+..|+++..
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p-~~~~~~~~la~~y~---------~~~------------~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPR-QKSIKGFYFAKLYY---------EAK------------EYDLAKKYICTYINV 60 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHH-HHHTTHHHHHHHHH---------HTT------------CHHHHHHHHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCc-ccHHHHHHHHHHHH---------HcC------------CHHHHHHHHHHHHHh
Confidence 78889999999999999999875332 122222 222211 111 26677777777642
Q ss_pred -CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHH-HHHH
Q 045708 299 -PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAA-FFSR 376 (1196)
Q Consensus 299 -p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~A-F~lR 376 (1196)
|.+ .++...++..+...+...++.+.+.+++.... +....+..+|.+|...|-..+++ .+++
T Consensus 61 ~p~~----------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~~~~aa~~~~~ 124 (150)
T 4ga2_A 61 QERD----------PKAHRFLGLLYELEENTDKAVECYRRSVELNP------TQKDLVLKIAELLCKNDVTDGRAKYWVE 124 (150)
T ss_dssp CTTC----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHCSSSSHHHHHHH
T ss_pred CCCC----------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 211 47888888888888888889888888765422 23457888999999999776665 3455
Q ss_pred HHH
Q 045708 377 QVA 379 (1196)
Q Consensus 377 ~l~ 379 (1196)
.+.
T Consensus 125 ~al 127 (150)
T 4ga2_A 125 RAA 127 (150)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 116
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=65.92 E-value=40 Score=37.14 Aligned_cols=150 Identities=18% Similarity=0.093 Sum_probs=76.0
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc-hhhHHHhHHHH----HHHHhhhccCCCch---hhHHHH---H
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTAD-YFWYAGALEGS----VCALLVDRMGQKDA---VLEEEV---K 283 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D-~LWlAsALEGi----~~~llL~~~~~~~~---~~~~ei---~ 283 (1196)
..+....+|..++..|++.+|+..|..|+..--...+ |..+|.++... -+.-.+.+..+.++ .....+ .
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 145 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLL 145 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 3445677899999999999999999999875322211 33344443211 00000000000000 000000 0
Q ss_pred ---HHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 045708 284 ---FRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIAR 360 (1196)
Q Consensus 284 ---~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~ 360 (1196)
.++.+|+..|.+... ..|. ..++...++..+...+...++.+.+.+++.... +-...+..++.
T Consensus 146 ~~~g~~~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~ 211 (388)
T 1w3b_A 146 KALGRLEEAKACYLKAIE-----TQPN---FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP------NFLDAYINLGN 211 (388)
T ss_dssp HTTSCHHHHHHHHHHHHH-----HCTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHH-----hCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC------CcHHHHHHHHH
Confidence 024556666655431 0011 124555566666666666666666666554311 12346667777
Q ss_pred HhccCCchhhHHHHHHHH
Q 045708 361 LFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 361 vy~~LGf~RK~AF~lR~l 378 (1196)
+|...|-..++.-..+.+
T Consensus 212 ~~~~~~~~~~A~~~~~~a 229 (388)
T 1w3b_A 212 VLKEARIFDRAVAAYLRA 229 (388)
T ss_dssp HHHTTTCTTHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHH
Confidence 777777766665555544
No 117
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=65.67 E-value=55 Score=34.47 Aligned_cols=132 Identities=12% Similarity=0.018 Sum_probs=76.1
Q ss_pred cceeeehhHhhhcC-ChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 217 RAQKTIGDYCLLAG-SPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 217 R~~KvlGDl~LLaG-~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
.....+|.+++..| ++..|+..|..|+..-.... ..|. .++.+.. ..+ .+.+|+..|.+
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~~~-----~l~~~~~--~~~------------~~~~A~~~~~~ 150 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYG-PAWI-----AYGHSFA--VES------------EHDQAMAAYFT 150 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCT-HHHH-----HHHHHHH--HHT------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccH-HHHH-----HHHHHHH--Hcc------------CHHHHHHHHHH
Confidence 34455677777777 77777777777765432211 1121 1110000 011 15566666665
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
+.. ..|. ..++...++..+...+...++.+.+.++..... +....+..++.+|...|-..++.-++
T Consensus 151 a~~-----~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~ 216 (330)
T 3hym_B 151 AAQ-----LMKG---CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAP------EDPFVMHEVGVVAFQNGEWKTAEKWF 216 (330)
T ss_dssp HHH-----HTTT---CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT------TCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHH-----hccc---cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHcccHHHHHHHH
Confidence 431 0001 124555677777777778888888888765422 22467778888888888888777777
Q ss_pred HHHHHHH
Q 045708 376 RQVAQLY 382 (1196)
Q Consensus 376 R~l~~~l 382 (1196)
+.+....
T Consensus 217 ~~a~~~~ 223 (330)
T 3hym_B 217 LDALEKI 223 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7665544
No 118
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.09 E-value=13 Score=34.67 Aligned_cols=75 Identities=16% Similarity=0.055 Sum_probs=56.8
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEe-ecceeeeeeeeEEECCCCeeEEEEEEEeCeeeeEEEceEEEEEecc
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSV-HSGNFDAFPISVELPPNSSKVITLSGIPTSVGPVTIPGCTVHCFGV 649 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~t-eGv~Fes~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~G~~~~v~g~ 649 (1196)
+..|++.+-.++|+|.=..++.++-+.-.+ .+..|...+..-.|+|+.++.|.+++.|+..|...-+ +.+.+.|.
T Consensus 22 v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~g~f~~~-i~v~~~g~ 97 (112)
T 2e6j_A 22 VFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIILGNFEEE-FLVNVNGS 97 (112)
T ss_dssp EESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECCCCCEEEEEE-ECEEESSC
T ss_pred EEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEECCCcceEEEE-EEEEECCC
Confidence 667999999999999888777776533111 1245777888999999999999999999999986543 44444443
No 119
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.94 E-value=37 Score=31.15 Aligned_cols=101 Identities=17% Similarity=0.106 Sum_probs=60.5
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
.......+|..++..|+|.+|+..|..++.... +.--.+.++-.++ |..-+. .+.+|+..|
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~a~~~~~~~---------------~~~~A~~~~ 88 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDA---TPQDQAVLHRNRAACHLKLE---------------DYDKAETEA 88 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC---CHHHHHHHHHHHHHHHHHTT---------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc---cchHHHHHHHHHHHHHHHHc---------------cHHHHHHHH
Confidence 344566789999999999999999999986432 2111123333332 211111 144555555
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.++.. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 89 ~~~~~-----~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 89 SKAIE-----KDGG---DVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHH-----HTSC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHh-----hCcc---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 54321 0011 1367777888888777778888888777643
No 120
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=64.87 E-value=21 Score=33.80 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=58.6
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC-
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI- 298 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~- 298 (1196)
.+|..++..|+|.+|+..|..++..-- .+-..|+. ++ |..- .+ ++.+|+..|.++..
T Consensus 23 ~~a~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~-----lg~~~~~---~g------------~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 23 ALGFNQYQAGKWDDAQKIFQALCMLDH-YDARYFLG-----LGACRQS---LG------------LYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHH-----HHHHHHH---TT------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhCC-ccHHHHHH-----HHHHHHH---Hh------------hHHHHHHHHHHHHhc
Confidence 478899999999999999999987432 33334432 21 1111 11 26677777776542
Q ss_pred -CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 299 -PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 299 -p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
|.+ .++.+.++..+...+...++.+.+.+++..
T Consensus 82 ~p~~----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 82 DINE----------PRFPFHAAECHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp CTTC----------THHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCC----------cHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 211 356677888888888888888887776543
No 121
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=64.67 E-value=32 Score=29.62 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=62.4
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
.....+|..++..|+|.+|+..|..|+...... -..| -.++.+. . ..+ ++++|+..|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~-----~~~a~~~-~-~~~------------~~~~A~~~~~~a 66 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE-SKYW-----LMKGKAL-Y-NLE------------RYEEAVDCYNYV 66 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC-HHHH-----HHHHHHH-H-HTT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC-HHHH-----HHHHHHH-H-Hcc------------CHHHHHHHHHHH
Confidence 344568999999999999999999999864322 1222 1222111 1 111 256666666665
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhc-cchHHHHHHHHhhccC
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRR-ELAKDVVELLTSAADG 341 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~-~~~~ei~~~L~~a~~~ 341 (1196)
.. ..|. ....++...++..+... +...++.+.+.++...
T Consensus 67 ~~-----~~~~-~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 67 IN-----VIED-EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HH-----TSCC-TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HH-----hCcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 42 0011 01246778888888888 8888888888887654
No 122
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=63.69 E-value=62 Score=28.19 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=55.9
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
+....+|..+...|+|.+|++.|.+++...... -..| -.++.+. . ..+ .+.+|+..|.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~-----~~la~~~-~-~~~------------~~~~A~~~~~~~ 69 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAW-----YNLGNAY-Y-KQG------------DYDEAIEYYQKA 69 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHH-----HHHHHHH-H-HTT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-HHHH-----HHHHHHH-H-HhC------------CHHHHHHHHHHH
Confidence 344568999999999999999999998754321 1112 2221111 1 111 144555555554
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhcc
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAAD 340 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~ 340 (1196)
.. ..|. ..++...++..+...+...++.+.+.++..
T Consensus 70 ~~-----~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 70 LE-----LDPN---NAEAWYNLGNAYYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HH-----hCCc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 21 0011 135666778777777777777777776654
No 123
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=63.61 E-value=22 Score=34.86 Aligned_cols=135 Identities=11% Similarity=-0.039 Sum_probs=76.8
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
.+....+|.+++..|++.+|+..|..++..-- |.-|+.. -+.+ .+..... ..+++..|.+
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p---~~~~~~~--~~~~--~~~~~~~-------------~~~a~~~~~~ 99 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQ---DNSYKSL--IAKL--ELHQQAA-------------ESPELKRLEQ 99 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC---CHHHHHH--HHHH--HHHHHHT-------------SCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC---ChHHHHH--HHHH--HHHhhcc-------------cchHHHHHHH
Confidence 34555677888888888888888887764322 2222111 0111 1111110 0113444444
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
... ..|. ..++.+.++..+...+...++.+.+.+++....... ....+..++.+|..+|=.-+..-..
T Consensus 100 al~-----~~P~---~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~----~~~a~~~l~~~~~~~g~~~~A~~~y 167 (176)
T 2r5s_A 100 ELA-----ANPD---NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQ----DGEVKKTFMDILSALGQGNAIASKY 167 (176)
T ss_dssp HHH-----HSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT----TTHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred HHH-----hCCC---CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC----hHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 321 0011 147888899999988888899998888765432211 1235566778888888777777776
Q ss_pred HHHHHHH
Q 045708 376 RQVAQLY 382 (1196)
Q Consensus 376 R~l~~~l 382 (1196)
|.++..+
T Consensus 168 ~~al~~~ 174 (176)
T 2r5s_A 168 RRQLYSI 174 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665443
No 124
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=63.33 E-value=50 Score=34.41 Aligned_cols=126 Identities=10% Similarity=0.039 Sum_probs=72.9
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
..-.+|.+++..|++..|+.+|..|++ ..+. .|+-.++.+.. ...+ . ...+.+|+..|.++.
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a~~---~~~~-----~a~~~lg~~~~-~g~~-~--------~~~~~~A~~~~~~a~ 69 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKACD---LKEN-----SGCFNLGVLYY-QGQG-V--------EKNLKKAASFYAKAC 69 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH---TTCH-----HHHHHHHHHHH-HTSS-S--------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH---CCCH-----HHHHHHHHHHH-cCCC-c--------CCCHHHHHHHHHHHH
Confidence 345689999999999999999999987 2221 12222211111 1000 0 011556777777654
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhh----ccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhcc----CCchh
Q 045708 298 IPDNAQRVSPLSFELEATLKLARFLCR----RELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGT----LDYQR 369 (1196)
Q Consensus 298 ~p~n~e~~p~l~~~~Ea~Lr~a~~L~~----~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~----LGf~R 369 (1196)
.. . ..++...++.++.. .+...++.+.+.++...+ ....+..++.+|.. .|=..
T Consensus 70 ~~---------~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--------~~~a~~~lg~~~~~~~~~~~~~~ 131 (273)
T 1ouv_A 70 DL---------N-YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--------YAEGCASLGGIYHDGKVVTRDFK 131 (273)
T ss_dssp HT---------T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHCSSSCCCHH
T ss_pred HC---------C-CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--------CccHHHHHHHHHHcCCCcccCHH
Confidence 21 0 14667777777766 666667777777765431 23456667777766 66666
Q ss_pred hHHHHHHHHH
Q 045708 370 KAAFFSRQVA 379 (1196)
Q Consensus 370 K~AF~lR~l~ 379 (1196)
|+.-+++.++
T Consensus 132 ~A~~~~~~a~ 141 (273)
T 1ouv_A 132 KAVEYFTKAC 141 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6555555543
No 125
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=63.26 E-value=36 Score=32.21 Aligned_cols=129 Identities=12% Similarity=0.012 Sum_probs=75.7
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
++....+|..++..|++.+|+..|..++..... + +.++-.++.+.+ ..+ .+.+|+..|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~--~----~~~~~~~~~~~~--~~~------------~~~~A~~~~~~ 67 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADAF--D----VDVALHLGIAYV--KTG------------AVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSC--C----HHHHHHHHHHHH--HTT------------CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc--C----hHHHHHHHHHHH--HcC------------CHHHHHHHHHH
Confidence 345566899999999999999999998754321 1 112222221111 111 14455555554
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHH
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFS 375 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~l 375 (1196)
... ..|. ..++...++..+...+...++.+.+.++..... +...++..+|.+|...|-..++.-++
T Consensus 68 ~~~-----~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~ 133 (186)
T 3as5_A 68 SLA-----DAPD---NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP------INFNVRFRLGVALDNLGRFDEAIDSF 133 (186)
T ss_dssp HHH-----HCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHh-----cCCC---CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc------HhHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 321 0011 136777788888777777778887777654321 12356677778887777776666555
Q ss_pred HHH
Q 045708 376 RQV 378 (1196)
Q Consensus 376 R~l 378 (1196)
..+
T Consensus 134 ~~~ 136 (186)
T 3as5_A 134 KIA 136 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 126
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=62.18 E-value=36 Score=32.59 Aligned_cols=68 Identities=12% Similarity=0.158 Sum_probs=45.7
Q ss_pred CCcEEEEeeCCCcceEEecccEEEEEEEEEeccccccceEEEEEecCCCcceEEEecccccc--ccCCCCCCEEEEEEEE
Q 045708 697 LPLLVSNVVGGDGAIILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKS--ALPLKPGAEVIIPVTL 774 (1196)
Q Consensus 697 qP~L~i~~ts~~~~vmLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~--~~~I~PG~s~t~~i~v 774 (1196)
+|-|.+...++ -...+|+..+|+++++|.|+.......+.|.... ..+.. -..|.+|++.++.|..
T Consensus 2 ~PDL~vt~itP---~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w 69 (114)
T 2l0d_A 2 IPDLVPVSLTP---VTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHW 69 (114)
T ss_dssp CCCEEEEEEEC---SEECTTSEEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEE
T ss_pred CCCcEEEeccC---CCcCCCCeEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEE
Confidence 46565544322 2389999999999999999887777777764311 11111 1258999999988865
Q ss_pred EE
Q 045708 775 KA 776 (1196)
Q Consensus 775 ~g 776 (1196)
.+
T Consensus 70 ~~ 71 (114)
T 2l0d_A 70 TL 71 (114)
T ss_dssp EC
T ss_pred ee
Confidence 54
No 127
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=61.86 E-value=33 Score=40.25 Aligned_cols=154 Identities=10% Similarity=-0.041 Sum_probs=84.0
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhH--HHhHHHH----HHHHhhhcc---CCCchhhHHHHH----
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWY--AGALEGS----VCALLVDRM---GQKDAVLEEEVK---- 283 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWl--AsALEGi----~~~llL~~~---~~~~~~~~~ei~---- 283 (1196)
.....+|++|...|++.+|++.|.+++..-. .+...|. |.++.-. -+.-++.++ ...+......+.
T Consensus 374 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 374 VTWLAVGIYYLCVNKISEARRYFSKSSTMDP-QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 3445689999999999999999999987432 2222343 2222210 011111111 001111111110
Q ss_pred --HHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCC-CCCHHHHHHHHHHHHH
Q 045708 284 --FRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKS-LIDASDRLILYIEIAR 360 (1196)
Q Consensus 284 --~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~-ll~~~dqi~i~~~lA~ 360 (1196)
..+++|+..|.+... ..|. ..++...++..+...+...++.+.+.++...... ..++.....++..++.
T Consensus 453 ~~g~~~~A~~~~~~~~~-----~~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~ 524 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYA-----LFQY---DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGH 524 (597)
T ss_dssp HHTCHHHHHHHHHHHHH-----HCCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH-----hCCC---ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHH
Confidence 125667777766431 0011 1345566777777777777888777776543110 1122333678888888
Q ss_pred HhccCCchhhHHHHHHHHH
Q 045708 361 LFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 361 vy~~LGf~RK~AF~lR~l~ 379 (1196)
+|...|-..++.-+++.+.
T Consensus 525 ~~~~~g~~~~A~~~~~~~~ 543 (597)
T 2xpi_A 525 AYRKLKMYDAAIDALNQGL 543 (597)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHH
Confidence 8888887777766666543
No 128
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=61.50 E-value=31 Score=35.53 Aligned_cols=30 Identities=23% Similarity=0.129 Sum_probs=16.2
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHH
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
.+....+|..++..|+|.+|+..|..|+..
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALAI 72 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHc
Confidence 344445555555555555555555555543
No 129
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=61.45 E-value=20 Score=40.76 Aligned_cols=74 Identities=16% Similarity=0.269 Sum_probs=50.5
Q ss_pred EEEEeeCCCcceEEecccEEEEEEEEEeccccccceEEEEEecCC--CcceEEEe----ccc-------cccccCCCCCC
Q 045708 700 LVSNVVGGDGAIILYEGEIRDVWISLANAGTVPVEQAHISLSGKN--QDSIISIA----SET-------LKSALPLKPGA 766 (1196)
Q Consensus 700 L~i~~ts~~~~vmLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~--~~~i~~~e----~e~-------~~~~~~I~PG~ 766 (1196)
+.++.. .+.-=..|-+-+++++++|.|+.||..=.|+.-+-. .+.+++++ .|+ +....||+|||
T Consensus 250 V~~~v~---~A~Y~vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGE 326 (382)
T 1yew_A 250 VSVKVE---DATYRVPGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGE 326 (382)
T ss_dssp EEEEEE---EEEEESSCSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTC
T ss_pred eEEEee---ccEEecCCcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCc
Confidence 344543 455666788889999999999999988877653310 01222221 111 34568999999
Q ss_pred EEEEEEEEEE
Q 045708 767 EVIIPVTLKA 776 (1196)
Q Consensus 767 s~t~~i~v~g 776 (1196)
+.++.++++.
T Consensus 327 Tr~~~v~a~d 336 (382)
T 1yew_A 327 TRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEC
T ss_pred eeEEEEEeeh
Confidence 9999999986
No 130
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=61.20 E-value=45 Score=34.79 Aligned_cols=126 Identities=16% Similarity=0.043 Sum_probs=76.3
Q ss_pred ceeeehhHhhh----cCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 218 AQKTIGDYCLL----AGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 218 ~~KvlGDl~LL----aG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
..-.+|.+++. .|++.+|+.+|..|++.- .+.|+-.++.+..-..... ..+.+|+..|
T Consensus 40 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--------~~~a~~~lg~~~~~g~~~~----------~~~~~A~~~~ 101 (273)
T 1ouv_A 40 GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--------YSNGCHLLGNLYYSGQGVS----------QNTNKALQYY 101 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTSSSC----------CCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHhCCCCcc----------cCHHHHHHHH
Confidence 34568888888 999999999999998641 2223332321111100001 1266777777
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhh----ccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhcc----C
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCR----RELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGT----L 365 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~----~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~----L 365 (1196)
+++.... ..++...++.++.. .+...++.+.+.++.... ....+..++.+|.. .
T Consensus 102 ~~a~~~~----------~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~a~~~lg~~~~~~~~~~ 163 (273)
T 1ouv_A 102 SKACDLK----------YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--------DGDGCTILGSLYDAGRGTP 163 (273)
T ss_dssp HHHHHTT----------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHcC----------CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--------cHHHHHHHHHHHHcCCCCC
Confidence 7764210 24777888888776 666778888888776532 23355666777765 6
Q ss_pred CchhhHHHHHHHHH
Q 045708 366 DYQRKAAFFSRQVA 379 (1196)
Q Consensus 366 Gf~RK~AF~lR~l~ 379 (1196)
|-..++.-+++.++
T Consensus 164 ~~~~~A~~~~~~a~ 177 (273)
T 1ouv_A 164 KDLKKALASYDKAC 177 (273)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 66666655555543
No 131
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=61.04 E-value=30 Score=37.17 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=63.0
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
..+.+|+.++..|+|.+|+..|..|+..-.. +-.+| -.++ |.. ..+ ++.+|+..|.++
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~-----~~la~~~~---~~~------------~~~~A~~~~~~a 64 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYY-----TNRALCYL---KMQ------------QPEQALADCRRA 64 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHH-----HHHHHHHH---HTT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHH-----HHHHHHHH---Hhc------------CHHHHHHHHHHH
Confidence 3456899999999999999999999986332 22222 2221 111 111 277888888887
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.. ..+- ...+...++..+...+...++.+.+.+++..
T Consensus 65 l~------~~p~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 65 LE------LDGQ--SVKAHFFLGQCQLEMESYDEAIANLQRAYSL 101 (281)
T ss_dssp TT------SCTT--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HH------hCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 53 1111 2467788888888888888888888776643
No 132
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=60.84 E-value=74 Score=33.75 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=23.0
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
..+|..++..|+|.+|+..|..++...
T Consensus 7 ~~~~~~~~~~g~~~~A~~~~~~~l~~~ 33 (359)
T 3ieg_A 7 LELGKKLLAAGQLADALSQFHAAVDGD 33 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 457889999999999999999998753
No 133
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=60.73 E-value=61 Score=33.29 Aligned_cols=116 Identities=8% Similarity=0.004 Sum_probs=73.0
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
....+|..++..|+|.+|+..|..|+. . ..+.-+.+.++-.++ +..-. + .+.+|+..|.++
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~--~~~~~~~~~~~~~lg~~~~~~---~------------~~~~A~~~~~~a 100 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-K--VNATKAKSADFEYYGKILMKK---G------------QDSLAIQQYQAA 100 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-T--SCTTTCCHHHHHHHHHHHHHT---T------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-c--cCchhHHHHHHHHHHHHHHHc---c------------cHHHHHHHHHHH
Confidence 556688999999999999999999997 2 234334454554443 22111 1 155666666654
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH-HHhccC
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIA-RLFGTL 365 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA-~vy~~L 365 (1196)
.. ..|. ..++...++..+...+...++.+.+.+++.... +....+..++ .+|...
T Consensus 101 ~~-----~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~~ 156 (272)
T 3u4t_A 101 VD-----RDTT---RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTT------TDPKVFYELGQAYYYNK 156 (272)
T ss_dssp HH-----HSTT---CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSC------CCHHHHHHHHHHHHHTT
T ss_pred Hh-----cCcc---cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCC------CcHHHHHHHHHHHHHHH
Confidence 31 0011 136777788888888888889998888876522 2244566666 555554
No 134
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=60.67 E-value=23 Score=40.63 Aligned_cols=57 Identities=19% Similarity=0.225 Sum_probs=41.5
Q ss_pred EecccEEEEEEEEEeccccccceEEEEEecCCCc-----ceEEEeccccccccCCCCCCEEEEEEEEEE
Q 045708 713 LYEGEIRDVWISLANAGTVPVEQAHISLSGKNQD-----SIISIASETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 713 LleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~-----~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
+.=|+..+-+|+|.|+|.+|+. |+|..+..+ +-..++ +....|.||+++.+.+++.-
T Consensus 42 v~~~~~~~~~l~i~N~g~~pa~---f~f~~~~~~~~~~~~wl~v~----p~~g~l~Pge~~~i~l~~~v 103 (366)
T 3qis_A 42 VKFRQLQKEKFQISNNGQVPCH---FSFIPKLNDSQYCKPWLRAE----PFEGYLEPNETVDISLDVYV 103 (366)
T ss_dssp ECBTCCEEEEEEEEECSSSCEE---EEEECCTTCSSSSCTTEEEE----SCEEEECTTCEEEEEEEECB
T ss_pred eeeCCeEEEEEEEEecCCceEE---EEEEeCCCCCCCCCCcEEEe----CCccEECCCCEEEEEEEEEE
Confidence 5567889999999999999994 445433211 112222 45679999999999999987
No 135
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=60.14 E-value=85 Score=34.99 Aligned_cols=62 Identities=18% Similarity=0.035 Sum_probs=42.7
Q ss_pred HHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 316 LKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 316 Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
+..+..+...+...++.+.+.++...... +.......+..++.+|...|-..++.-+++.++
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 322 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVL 322 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 33466666677777888888777654222 234456788889999999998888776666654
No 136
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=60.09 E-value=16 Score=42.93 Aligned_cols=97 Identities=15% Similarity=0.039 Sum_probs=57.2
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhh
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRK 295 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~k 295 (1196)
......+|..++..|+|.+|++.|..|++.-... +.++-.++.+.+- .+ ++++|+..|.+
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~------~~~~~~lg~~~~~--~g------------~~~~A~~~~~~ 65 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLR--TE------------CYGYALGDATR 65 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHH--TT------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHH--hc------------CHHHHHHHHHH
Confidence 3456778999999999999999999999863322 2233333211111 11 15556666665
Q ss_pred cCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhcc
Q 045708 296 SFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAAD 340 (1196)
Q Consensus 296 s~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~ 340 (1196)
+.. ..+- ..++...++..+...+...++.+.+.+++.
T Consensus 66 al~------l~p~--~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 66 AIE------LDKK--YIKGYYRRAASNMALGKFRAALRDYETVVK 102 (477)
T ss_dssp HHH------SCTT--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHH------hCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 431 0010 135666666666666666666666666554
No 137
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=59.96 E-value=33 Score=39.98 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=72.8
Q ss_pred hcCChHHHHHHHHHHHHHhcc--CCchhhHHHhHHHHHHHH-hhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 045708 228 LAGSPVDANAHYSTALELARL--TADYFWYAGALEGSVCAL-LVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDNAQR 304 (1196)
Q Consensus 228 LaG~~~DAL~~Y~eAi~~lk~--~~D~LWlAsALEGi~~~l-lL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n~e~ 304 (1196)
..|+|.+|+..|..++++..+ ..+|.+.+.++..++.+. -..++ ++....+.+++..|.+...+.+
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~--------~eA~~~~~~~L~i~~~~lg~~H--- 367 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLL--------EEALFYGTRTMEPYRIFFPGSH--- 367 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCH--------HHHHHHHHHHHHHHHHHSCSSC---
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccH--------HHHHHHHHHHHHhHHHHcCCCC---
Confidence 468999999999999887654 588999999999886332 22222 4666678889999988764322
Q ss_pred CCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 305 VSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 305 ~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
|. -.-+..+++..+..++...++.+++.+|+.+
T Consensus 368 --p~--~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 368 --PV--RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp --HH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --hH--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 22 1467788899888888888888888877654
No 138
>3hs8_A Adaptor protein complex AP-2, alpha 2 subunit; adaptor complex AP-2, endocytosis, cell membrane, coated PIT binding, membrane, disease mutation; 1.90A {Mus musculus}
Probab=58.82 E-value=17 Score=40.12 Aligned_cols=77 Identities=13% Similarity=0.174 Sum_probs=55.8
Q ss_pred EecccEEEEEEEEEeccccccceEEEEEecCCC--cceEEEeccccccccCCCCCCEEEEEEEEEEcccCCCCccccccc
Q 045708 713 LYEGEIRDVWISLANAGTVPVEQAHISLSGKNQ--DSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGPVDPETVAGK 790 (1196)
Q Consensus 713 LleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~--~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~~~~~~~~~~ 790 (1196)
=|.|..-.+.+.+.|+++.|+..+.+++..+.. +.+. +... +.+..|+||+.+...+.+...+|=.
T Consensus 64 e~~~~~g~i~L~~gNKs~~~it~f~~~i~~~~~~~~~l~-~~~~--~~~~tI~p~~q~qq~i~v~~~~pF~--------- 131 (273)
T 3hs8_A 64 EFRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLN-LQTK--PVDPTVDGGAQVQQVVNIECISDFT--------- 131 (273)
T ss_dssp EEETTEEEEEEEEEECSSSCBBSCCCEEECCTTHHHHEE-EEEC--CCCSCBCTTCEEEEEEEEEECSCCC---------
T ss_pred EEeCceEEEEEEEEcCCCCcceeEEEEEECCCCCCcceE-EEec--CCCCeECCCCEEEEEEEEEEccccc---------
Confidence 357888999999999999999999888875431 1222 2222 2346899999999888888844432
Q ss_pred cccCCcccccccCCCCeEEEEecc
Q 045708 791 IASGSIGRHVKDVSSPSLLIHYAG 814 (1196)
Q Consensus 791 ~~~~~~~~~~k~~t~~~i~i~Y~~ 814 (1196)
..+.+.|.|-+
T Consensus 132 -------------~~P~l~isf~~ 142 (273)
T 3hs8_A 132 -------------EAPVLNIQFRY 142 (273)
T ss_dssp -------------CCCEEEEEEEE
T ss_pred -------------CCCEEEEEEEE
Confidence 46789999975
No 139
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=58.60 E-value=25 Score=38.43 Aligned_cols=133 Identities=11% Similarity=-0.012 Sum_probs=59.9
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccC-CchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLT-ADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~-~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
......+|..+...|++.+|+..|..|+...... +...|. .++ +..-...+ ++....+.+++...
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~-----~l~~~~~~~g~~--------~~A~~~~~~al~~~ 243 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQT-----GLGVLFHLSGEF--------NRAIDAFNAALTVR 243 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHH-----HHHHHHHHHTCH--------HHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHH-----HHHHHHHHCCCH--------HHHHHHHHHHHHhC
Confidence 3445567777777788888888888877754331 112222 121 11111111 23334455555442
Q ss_pred hhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHH
Q 045708 294 RKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAF 373 (1196)
Q Consensus 294 ~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF 373 (1196)
... .++...++..+...+...++.+.+.+++...... ...+..++.+|...|-..++.-
T Consensus 244 p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~ 302 (365)
T 4eqf_A 244 PED---------------YSLWNRLGATLANGDRSEEAVEAYTRALEIQPGF------IRSRYNLGISCINLGAYREAVS 302 (365)
T ss_dssp TTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc------hHHHHHHHHHHHHCCCHHHHHH
Confidence 211 2344555555555555555555555554332211 2345556666666666666666
Q ss_pred HHHHHHHHH
Q 045708 374 FSRQVAQLY 382 (1196)
Q Consensus 374 ~lR~l~~~l 382 (1196)
+++.++...
T Consensus 303 ~~~~al~~~ 311 (365)
T 4eqf_A 303 NFLTALSLQ 311 (365)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 666665555
No 140
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=58.22 E-value=72 Score=32.43 Aligned_cols=135 Identities=19% Similarity=0.139 Sum_probs=84.0
Q ss_pred hhhccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHH
Q 045708 211 KKRRLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVI 290 (1196)
Q Consensus 211 kkR~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai 290 (1196)
-+.......-.+|.+++..|++..|+.+|..|++. ++ +.|+=.+. .+... ++.. ..+.+|+
T Consensus 13 a~~g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----g~----~~a~~~lg--~~y~~-~g~~--------~~~~~A~ 73 (212)
T 3rjv_A 13 AEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----GD----GDALALLA--QLKIR-NPQQ--------ADYPQAR 73 (212)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TC----HHHHHHHH--HHTTS-STTS--------CCHHHHH
T ss_pred HHCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHH--HHHHc-CCCC--------CCHHHHH
Confidence 33455667778999999999999999999999862 21 22222221 11111 2111 1267888
Q ss_pred HHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhh----ccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhcc--
Q 045708 291 LHYRKSFIPDNAQRVSPLSFELEATLKLARFLCR----RELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGT-- 364 (1196)
Q Consensus 291 ~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~----~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~-- 364 (1196)
..|+++..+. ..++...++.++.. .....++.+++.++...... .+....+..++.+|..
T Consensus 74 ~~~~~A~~~g----------~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~----~~~~~a~~~Lg~~y~~g~ 139 (212)
T 3rjv_A 74 QLAEKAVEAG----------SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSES----DAAVDAQMLLGLIYASGV 139 (212)
T ss_dssp HHHHHHHHTT----------CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS----HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHCC----------CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC----cchHHHHHHHHHHHHcCC
Confidence 8888875321 14788888888864 44567788999888754221 1335667777888766
Q ss_pred --CCchhhHHHHHHHH
Q 045708 365 --LDYQRKAAFFSRQV 378 (1196)
Q Consensus 365 --LGf~RK~AF~lR~l 378 (1196)
.+=..|+..+.+.+
T Consensus 140 g~~~d~~~A~~~~~~A 155 (212)
T 3rjv_A 140 HGPEDDVKASEYFKGS 155 (212)
T ss_dssp SSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 44455555555554
No 141
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=58.05 E-value=70 Score=37.38 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=88.0
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhh--HHHhHHHH--H--HHHhhhcc---CCCchhhHHHHHH---
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFW--YAGALEGS--V--CALLVDRM---GQKDAVLEEEVKF--- 284 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LW--lAsALEGi--~--~~llL~~~---~~~~~~~~~ei~~--- 284 (1196)
.....+|+.+...|++.+|++.|.+++..... +...| +|.++.-. . +.-++.++ ...+......+..
T Consensus 408 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 408 PAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34567899999999999999999999865432 22333 33333211 0 11111111 1111111111111
Q ss_pred ---HHHHHHHHHhhcCC--CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 045708 285 ---RYNSVILHYRKSFI--PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIA 359 (1196)
Q Consensus 285 ---~~~~ai~lY~ks~~--p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA 359 (1196)
++++|+..|.+... |.. ...+- -..++...++..+...+...++.+.+.++..... +...+|..++
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~~--~~~p~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p------~~~~~~~~l~ 557 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKKT--QSNEK-PWAATWANLGHAYRKLKMYDAAIDALNQGLLLST------NDANVHTAIA 557 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHS--CCCSG-GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS------CCHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhhhcc--ccchh-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CChHHHHHHH
Confidence 14566666655421 000 00011 1146777788888888888888888887754321 1246888999
Q ss_pred HHhccCCchhhHHHHHHHHHH
Q 045708 360 RLFGTLDYQRKAAFFSRQVAQ 380 (1196)
Q Consensus 360 ~vy~~LGf~RK~AF~lR~l~~ 380 (1196)
.+|...|-..++.-+++.++.
T Consensus 558 ~~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 558 LVYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHh
Confidence 999999998888777776543
No 142
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=57.90 E-value=14 Score=42.44 Aligned_cols=73 Identities=14% Similarity=0.223 Sum_probs=48.6
Q ss_pred EEEEeeCCCcceEEecccEEEEEEEEEeccccccceEEEEEec-----CCC-cceEEEeccc------cccccCCCCCCE
Q 045708 700 LVSNVVGGDGAIILYEGEIRDVWISLANAGTVPVEQAHISLSG-----KNQ-DSIISIASET------LKSALPLKPGAE 767 (1196)
Q Consensus 700 L~i~~ts~~~~vmLleGE~~~f~ItL~N~S~~pV~~l~~sf~d-----~~~-~~i~~~e~e~------~~~~~~I~PG~s 767 (1196)
+.+++. .+.-=..|-+-+++++++|.|+.||..=.|..-+ +.- ..-..|..|+ -... +|+|||+
T Consensus 284 V~~~v~---~A~Y~vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGET 359 (419)
T 3rfr_A 284 VTTELN---GGVYKVPGRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGES 359 (419)
T ss_dssp CEEEEE---EEEEESSSSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCE
T ss_pred eEEEEe---ceEEecCCcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcc
Confidence 345553 4555667888899999999999999877776432 210 1001111221 2335 9999999
Q ss_pred EEEEEEEEE
Q 045708 768 VIIPVTLKA 776 (1196)
Q Consensus 768 ~t~~i~v~g 776 (1196)
.++.++++.
T Consensus 360 rt~~V~a~d 368 (419)
T 3rfr_A 360 KEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeeh
Confidence 999999997
No 143
>1kyf_A Alpha-adaptin C; protein-peptide complex, endocytosis, endocytosis/exocytosis complex; 1.22A {Mus musculus} SCOP: b.1.10.1 d.105.1.1 PDB: 1ky7_A 1kyd_A 1ky6_A 1kyu_A 1qtp_A 1qts_A 2vj0_A 1w80_A 1b9k_A
Probab=57.82 E-value=17 Score=39.48 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=54.9
Q ss_pred ecccEEEEEEEEEeccccccceEEEEEecCC--CcceEEEeccccccccCCCCCCEEEEEEEEEEcccCCCCcccccccc
Q 045708 714 YEGEIRDVWISLANAGTVPVEQAHISLSGKN--QDSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGPVDPETVAGKI 791 (1196)
Q Consensus 714 leGE~~~f~ItL~N~S~~pV~~l~~sf~d~~--~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~~~~~~~~~~~ 791 (1196)
|.|..-.+.+.+.|+++.|+..+.+++..+. +..+ .+... +.+..|+||+.+...+.+...+|=.
T Consensus 39 ~~~~~gri~l~~gNKs~~~l~~f~~~i~~~~~~~~~l-~~~~~--~~~~~I~~~~q~qq~i~v~~~~~f~---------- 105 (247)
T 1kyf_A 39 FRQNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNL-NLQTK--PVDPTVDGGAQVQQVVNIECISDFT---------- 105 (247)
T ss_dssp EETTEEEEEEEEEECSSSCBEEEEEEEECCHHHHHHE-EEEEC--CCCSCBCTTCEEEEEEEEEECSCCC----------
T ss_pred EeCCeEEEEEEEEcCCCCceeeEEEEEecCcccCCCe-eEecC--CCCceeCCCcEEEEEEEEEEccccC----------
Confidence 5777889999999999999999999886522 1111 12111 1235799999999999999944432
Q ss_pred ccCCcccccccCCCCeEEEEecc
Q 045708 792 ASGSIGRHVKDVSSPSLLIHYAG 814 (1196)
Q Consensus 792 ~~~~~~~~~k~~t~~~i~i~Y~~ 814 (1196)
..+.+.|.|..
T Consensus 106 ------------~~P~l~isf~~ 116 (247)
T 1kyf_A 106 ------------EAPVLNIQFRY 116 (247)
T ss_dssp ------------CCCEEEEEEEE
T ss_pred ------------CCCEEEEEEEE
Confidence 45689999976
No 144
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=57.40 E-value=51 Score=39.20 Aligned_cols=79 Identities=8% Similarity=-0.155 Sum_probs=58.4
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhcc--CCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARL--TADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~--~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
..+..-.+|.+|.-.|+|.+|+..|..|+++.++ ..||--.|.++-.++.+..- .|. .++....+.+|+.+
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~--~G~-----~~eA~~~~~~Al~i 422 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH--AGH-----IEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH--TTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH--CCC-----HHHHHHHHHHHHHH
Confidence 3445566888999999999999999999999876 68888899998887643222 121 13555668888888
Q ss_pred HhhcCCCC
Q 045708 293 YRKSFIPD 300 (1196)
Q Consensus 293 Y~ks~~p~ 300 (1196)
+.+...|+
T Consensus 423 ~~~~lG~~ 430 (490)
T 3n71_A 423 LLVTHGPS 430 (490)
T ss_dssp HHHHTCTT
T ss_pred HHHHhCCC
Confidence 88876543
No 145
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=57.34 E-value=1e+02 Score=32.26 Aligned_cols=61 Identities=10% Similarity=0.005 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 313 EATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 313 Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
++...++..+...+...++.+.+.++..... +....+..+|.+|...|-..++.-+++.+.
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 233 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRP------DDAQLWNKLGATLANGNRPQEALDAYNRAL 233 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4555556655555555556555555543211 112345555666666665555555555443
No 146
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=57.15 E-value=81 Score=30.36 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=60.9
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
.......+|.+++..|+|.+|+..|..|+...... ...|. .++.++.. ..+... ..+|+..|.
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~-----~la~~l~~-~~~~~~----------~~~A~~~~~ 105 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN-AELYA-----ALATVLYY-QASQHM----------TAQTRAMID 105 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC-HHHHH-----HHHHHHHH-HTTTCC----------CHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-HHHHH-----HHHHHHHH-hcCCcc----------hHHHHHHHH
Confidence 34566789999999999999999999999875432 22222 22211111 111110 034444444
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCC
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGA 342 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~ 342 (1196)
+... ..|. ..++...++..+...+...++.+.+.+++...
T Consensus 106 ~al~-----~~p~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 106 KALA-----LDSN---EITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHH-----hCCC---cHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 4321 0001 13667778888887788888888888777653
No 147
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=57.10 E-value=40 Score=38.75 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=27.6
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhcc
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARL 248 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~ 248 (1196)
.+.....+|.++...|++.+|+..|..++..-..
T Consensus 242 ~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~ 275 (537)
T 3fp2_A 242 AALALCYTGIFHFLKNNLLDAQVLLQESINLHPT 275 (537)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC
Confidence 3555667889999999999999999999986443
No 148
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=56.54 E-value=9.6 Score=33.57 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=12.3
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHH
Q 045708 222 IGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
+|..++..|+|.+|+..|..|+..
T Consensus 10 ~g~~~~~~~~~~~A~~~~~~al~~ 33 (111)
T 2l6j_A 10 QGNSLFKQGLYREAVHCYDQLITA 33 (111)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhc
Confidence 445555555555555555555543
No 149
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=55.28 E-value=49 Score=38.56 Aligned_cols=129 Identities=13% Similarity=-0.029 Sum_probs=82.5
Q ss_pred ccccceeeehhHhhhcCCh-HHHHHHHHHHHHHhccCCchhhHHHhHHHHH-HHHhhhccCCCchhhHHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSP-VDANAHYSTALELARLTADYFWYAGALEGSV-CALLVDRMGQKDAVLEEEVKFRYNSVIL 291 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~-~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~-~~llL~~~~~~~~~~~~ei~~~~~~ai~ 291 (1196)
...+....+|..++..|+| .+|++.|..|+..-.. +...| -.++ +..- . ..+.+|+.
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~-----~~lg~~~~~---~------------g~~~~A~~ 158 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAW-----NQLGEVYWK---K------------GDVTSAHT 158 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHH-----HHHHHHHHH---H------------TCHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHH-----HHHHHHHHH---c------------CCHHHHHH
Confidence 3566777899999999999 9999999999976432 22222 2222 1111 1 12778888
Q ss_pred HHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhc---------cchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q 045708 292 HYRKSFIPDNAQRVSPLSFELEATLKLARFLCRR---------ELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLF 362 (1196)
Q Consensus 292 lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~---------~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy 362 (1196)
.|.++.. ..|. .++...++..+... +...++.+.+.+++.... +....+..++.+|
T Consensus 159 ~~~~al~-----~~p~----~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~ 223 (474)
T 4abn_A 159 CFSGALT-----HCKN----KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDV------LDGRSWYILGNAY 223 (474)
T ss_dssp HHHHHHT-----TCCC----HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHH
T ss_pred HHHHHHh-----hCCC----HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCC------CCHHHHHHHHHHH
Confidence 8888752 1122 26777888888777 777788888888765422 1234667777777
Q ss_pred ccC--------CchhhHHHHHHHH
Q 045708 363 GTL--------DYQRKAAFFSRQV 378 (1196)
Q Consensus 363 ~~L--------Gf~RK~AF~lR~l 378 (1196)
... |-..++.-+++.+
T Consensus 224 ~~~~~~~~~~~g~~~~A~~~~~~a 247 (474)
T 4abn_A 224 LSLYFNTGQNPKISQQALSAYAQA 247 (474)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccchHHHHHHHHHHH
Confidence 666 5455544444443
No 150
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=53.63 E-value=28 Score=31.00 Aligned_cols=46 Identities=17% Similarity=0.070 Sum_probs=34.3
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhcc-CCchhhHHHhHHHHH
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARL-TADYFWYAGALEGSV 263 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~-~~D~LWlAsALEGi~ 263 (1196)
....+|..++..|+|.+|+..|..++..... ..++...+.++-.++
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la 86 (131)
T 1elr_A 40 YITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIG 86 (131)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHH
Confidence 4456799999999999999999999998765 355544455544443
No 151
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=52.95 E-value=12 Score=33.50 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=26.1
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhcc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARL 248 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~ 248 (1196)
..-.+|..++..|+|.+|+..|..|++.-..
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 39 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPD 39 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3456899999999999999999999986543
No 152
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=52.84 E-value=1.2e+02 Score=34.04 Aligned_cols=141 Identities=10% Similarity=0.090 Sum_probs=77.3
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhh--HHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHh
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFW--YAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYR 294 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LW--lAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ 294 (1196)
.....+|.++...|++..|+..|..|+..-.. +..+| +|-++....-. .. ................+.+|+..|.
T Consensus 248 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~-~~-~~~~~~~~~~~~~~~~~~~A~~~~~ 324 (472)
T 4g1t_A 248 DVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQ-VM-NLRENGMYGKRKLLELIGHAVAHLK 324 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHH-HH-HC------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHH-hh-hHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34456899999999999999999999876433 22233 33332221100 00 0000011111234445788888888
Q ss_pred hcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh-ccCCchhhH
Q 045708 295 KSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLF-GTLDYQRKA 371 (1196)
Q Consensus 295 ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy-~~LGf~RK~ 371 (1196)
++... .|. ..++...++..+...+...++.+.+.+++... .+..+...++..++.++ ...|-.-++
T Consensus 325 ~a~~~-----~~~---~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~A 391 (472)
T 4g1t_A 325 KADEA-----NDN---LFRVCSILASLHALADQYEEAEYYFQKEFSKE---LTPVAKQLLHLRYGNFQLYQMKCEDKA 391 (472)
T ss_dssp HHHHH-----CTT---TCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHTSSCHHHH
T ss_pred HHhhc-----CCc---hhhhhhhHHHHHHHhccHHHHHHHHHHHHhcC---CCChHHHHHHHHHHHHHHHHCCCHHHH
Confidence 76420 011 12455667888888888889999998887542 22344444554444332 244443333
No 153
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=52.75 E-value=54 Score=33.64 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=33.1
Q ss_pred HHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 320 RFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 320 ~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
.+........++.+.+.+++...... ..+....+..+|.+|...|-..++.-+++.++
T Consensus 185 ~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 242 (275)
T 1xnf_A 185 EFYLGNISEQTLMERLKADATDNTSL--AEHLSETNFYLGKYYLSLGDLDSATALFKLAV 242 (275)
T ss_dssp HHHTTSSCHHHHHHHHHHHCCSHHHH--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHhcccccc--cccccHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 33333333456666666655431110 01235677788888888887777776666543
No 154
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=52.35 E-value=1e+02 Score=31.51 Aligned_cols=126 Identities=17% Similarity=0.136 Sum_probs=70.6
Q ss_pred hhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCCC---
Q 045708 226 CLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDNA--- 302 (1196)
Q Consensus 226 ~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n~--- 302 (1196)
.+=.|.|++|.-.+.-++++....+|.+=-.--.|-+.+..-. .+++..+ ......|.+|++.++....+.++
T Consensus 30 L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~lada-lf~~~ey---rrA~~~y~qALq~~k~l~k~~s~~~~ 105 (167)
T 3ffl_A 30 MAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADS-LFHDKEY---RNAVSKYTMALQQKKALSKTSKVRPS 105 (167)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHH-HHHTTCH---HHHHHHHHHHHHHHHCC---------
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHH-HHcccHH---HHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 3456899999999999999999888862222222222111000 0122222 12334467777777643221110
Q ss_pred ----CCCC---CchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHH-HHHHHHHHHHhc
Q 045708 303 ----QRVS---PLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDR-LILYIEIARLFG 363 (1196)
Q Consensus 303 ----e~~p---~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dq-i~i~~~lA~vy~ 363 (1196)
.+.| .+..+.|.-.|+|+.+...+...+++..|..+ +. ..| -++-..||.+|.
T Consensus 106 ~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~-------k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 106 TGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PS-------RQRTPKINMLLANLYK 166 (167)
T ss_dssp -----------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CG-------GGCCHHHHHHHHHHCC
T ss_pred ccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-Cc-------hhcCHHHHHHHHHHhc
Confidence 0111 12346788899999999988888998888732 11 122 345666777774
No 155
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=51.56 E-value=26 Score=30.68 Aligned_cols=47 Identities=6% Similarity=-0.140 Sum_probs=31.6
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEG 261 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEG 261 (1196)
.......+|..++..|+|.+|+..|..|+.+.....|..|++.++-.
T Consensus 37 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 37 NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 45555667778888888888888888877665555566665555443
No 156
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=48.36 E-value=16 Score=32.60 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=31.0
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchh
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYF 253 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~L 253 (1196)
..-.+|..+...|++.+|+..|..|+.+.....|.-
T Consensus 43 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 78 (100)
T 3ma5_A 43 TYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK 78 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh
Confidence 445689999999999999999999999988777753
No 157
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=47.97 E-value=51 Score=37.82 Aligned_cols=50 Identities=20% Similarity=0.173 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 284 FRYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 284 ~~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
..+++|+..|+++.. ..|. ..++...++.++...+...++.+.+.+++..
T Consensus 442 ~~~~~A~~~~~~a~~-----~~p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 442 EKFNAAIKLLTKACE-----LDPR---SEQAKIGLAQLKLQMEKIDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHHHHHHHHHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH-----hCCC---CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 457888888887642 0111 1367788888888888888888888887654
No 158
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=47.81 E-value=67 Score=31.78 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=62.2
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
+....+|..++..|+|.+|+..|..|+..-.. + +.++-.++.+. . ..+ ++.+|+..|.++
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~-----~~~~~~lg~~~-~-~~~------------~~~~A~~~~~~a 97 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKH-L-----AVAYFQRGMLY-Y-QTE------------KYDLAIKDLKEA 97 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-C-----HHHHHHHHHHH-H-HTT------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-c-----hHHHHHHHHHH-H-Hcc------------cHHHHHHHHHHH
Confidence 35567899999999999999999999986432 1 12222222111 1 111 145555555554
Q ss_pred CC--CCCCC------CCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 297 FI--PDNAQ------RVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 297 ~~--p~n~e------~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
.. |.+.. ....-.-..++...++..+...+...++.+.+.+++..
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 98 LIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 31 11110 00000112477788888888888888888888887655
No 159
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=47.63 E-value=65 Score=31.16 Aligned_cols=48 Identities=15% Similarity=0.132 Sum_probs=35.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 286 YNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 286 ~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
+++|+..|.++.. ..|. ..++...++..+...+...++.+.+.+++..
T Consensus 123 ~~~A~~~~~~~l~-----~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 123 HDKAIEAYEKTIS-----IKPG---FIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHH-----hcch---hhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 7888888888652 0111 2477888899888888889999999888653
No 160
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=46.79 E-value=68 Score=37.95 Aligned_cols=118 Identities=14% Similarity=0.044 Sum_probs=60.6
Q ss_pred hcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045708 228 LAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDNAQRVSP 307 (1196)
Q Consensus 228 LaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n~e~~p~ 307 (1196)
++|++.+|++.|.+|+..-.. +-..| -.++.+.+ .. ..+.+|+..|+++..- .|.
T Consensus 1 ~~g~~~~A~~~~~~al~~~p~-~~~~~-----~~lg~~~~--~~------------g~~~~A~~~~~~al~~-----~p~ 55 (568)
T 2vsy_A 1 MTADGPRELLQLRAAVRHRPQ-DFVAW-----LMLADAEL--GM------------GDTTAGEMAVQRGLAL-----HPG 55 (568)
T ss_dssp --------------------C-CHHHH-----HHHHHHHH--HH------------TCHHHHHHHHHHHHTT-----STT
T ss_pred CCccHHHHHHHHHHHHHhCCC-CHHHH-----HHHHHHHH--Hc------------CCHHHHHHHHHHHHHh-----CCC
Confidence 468999999999999875332 22222 22211111 11 1267788888876520 111
Q ss_pred chhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Q 045708 308 LSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 308 l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l~ 379 (1196)
..++...++..+...+...++.+.+.+++.... +....+..+|.+|...|-..++.-+++.++
T Consensus 56 ---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al 118 (568)
T 2vsy_A 56 ---HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAP------EHPGIALWLGHALEDAGQAEAAAAAYTRAH 118 (568)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 247888889988888888889888888765422 224577888999999998877776666653
No 161
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=46.52 E-value=1.3e+02 Score=28.39 Aligned_cols=49 Identities=20% Similarity=0.127 Sum_probs=35.4
Q ss_pred EEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEE
Q 045708 720 DVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 720 ~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
...++|+|.++.+|-| +++..+ ...|.+.. ....|+||+++.+.|+.++
T Consensus 18 ~~~l~L~N~t~~~vaF-KVKtT~---p~~y~VrP----~~G~I~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVF-KIKSSN---NNEYRIAP----VFGFVDPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEE-EEEESC---SSSEEEEC----SEEEECTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEE-EEEeCC---CCceEEcC----CceEECCCCeEEEEEEeCC
Confidence 5899999999988733 444433 44555542 2357899999999999887
No 162
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=46.41 E-value=42 Score=38.12 Aligned_cols=66 Identities=12% Similarity=0.036 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhcc---CCchhhHHHHHHHH
Q 045708 313 EATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGT---LDYQRKAAFFSRQV 378 (1196)
Q Consensus 313 Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~---LGf~RK~AF~lR~l 378 (1196)
++...++..+...+...++.+.+.++.............+..+..++.+|.. .|-..++.-+++.+
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a 441 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 441 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH
Confidence 4555666666666666667666666543311111101123466777777777 77666665555544
No 163
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.40 E-value=57 Score=30.23 Aligned_cols=47 Identities=26% Similarity=0.371 Sum_probs=32.3
Q ss_pred ccccCCCCceeEEEEEEEEecceEEEEEEEEeecchhHHHhhcccCCCCCCceecCCCcEEEeccC
Q 045708 1130 TMEVPPLQESKHCFSLYFLVPGEYTLVAAAVIDDANNILRARARTDSPDEPIFCRGPPFHVRVSGT 1195 (1196)
Q Consensus 1130 ~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1195 (1196)
..+|.-.+...+.+.-+...+|+|+|.- .+ .+++| .|.||.|.|.++
T Consensus 66 ~~~v~D~~dGty~v~y~p~~~G~y~i~V--~~---------------~g~~i--~gSPF~v~v~~~ 112 (113)
T 2ds4_A 66 RTMVQDNKDGTYYISYTPKEPGVYTVWV--CI---------------KEQHV--QGSPFTVTVRRK 112 (113)
T ss_dssp EEEEECCSSSEEEEEEECSSSEEEEEEE--EE---------------SSCBC--TTCSEEEEEECC
T ss_pred EEEEEECCCCEEEEEEEeCCCeEEEEEE--EE---------------CCEEC--CCCCEEEEEEcC
Confidence 3455555666677777777899998843 23 23444 789999999875
No 164
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=45.12 E-value=89 Score=38.35 Aligned_cols=136 Identities=11% Similarity=-0.073 Sum_probs=69.3
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhh-HHHhHHHH---H-HHHhhhccCCCchh---hHH---HHHH-
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFW-YAGALEGS---V-CALLVDRMGQKDAV---LEE---EVKF- 284 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LW-lAsALEGi---~-~~llL~~~~~~~~~---~~~---ei~~- 284 (1196)
.....+|..++..|+|.+|+..|..|+..--...+..| +|-++... - +...+.+..+.++. ... .+..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 45567899999999999999999999986443322222 33333321 0 11111100000000 000 0000
Q ss_pred --HHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q 045708 285 --RYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLF 362 (1196)
Q Consensus 285 --~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy 362 (1196)
++.+ +..|+++.. ..|. ..++...++..+...+...++.+.+.++...+ -+....+..++.+|
T Consensus 514 ~g~~~~-~~~~~~al~-----~~P~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWS-----TNDG---VISAAFGLARARSAEGDRVGAVRTLDEVPPTS------RHFTTARLTSAVTL 578 (681)
T ss_dssp HTCCCT-TCHHHHHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTS------TTHHHHHHHHHHHT
T ss_pred cCChHH-HHHHHHHHH-----hCCc---hHHHHHHHHHHHHHcCCHHHHHHHHHhhcccC------cccHHHHHHHHHHH
Confidence 1223 333333221 0011 14567778888888888888999888875432 13445666777777
Q ss_pred ccCCc
Q 045708 363 GTLDY 367 (1196)
Q Consensus 363 ~~LGf 367 (1196)
-..|.
T Consensus 579 ~~~~~ 583 (681)
T 2pzi_A 579 LSGRS 583 (681)
T ss_dssp C----
T ss_pred HccCC
Confidence 55554
No 165
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=44.60 E-value=42 Score=38.92 Aligned_cols=145 Identities=12% Similarity=0.052 Sum_probs=78.6
Q ss_pred hhhhhcccc--ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHH
Q 045708 209 KAKKRRLAR--AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRY 286 (1196)
Q Consensus 209 r~kkR~~GR--~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~ 286 (1196)
+..||--=| +.-.+|+||+..|.|.+|++.|.....-+++..|- .--+|..+.-+-+. ....|. ..+...+
T Consensus 90 ~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~---~~llev~lle~~~~-~~~~n~---~k~k~~l 162 (394)
T 3txn_A 90 KQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDK---NLLVEVQLLESKTY-HALSNL---PKARAAL 162 (394)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCT---HHHHHHHHHHHHHH-HHTTCH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccc---hhHHHHHHHHHHHH-HHhccH---HHHHHHH
Confidence 334443334 44589999999999999999999999999998772 22334332111111 111121 1222223
Q ss_pred HHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHH--HHHh-hccchHHHHHHHHhhccCCCCCCCH-HHHHHHHHHHHHHh
Q 045708 287 NSVILHYRKSFIPDNAQRVSPLSFELEATLKLA--RFLC-RRELAKDVVELLTSAADGAKSLIDA-SDRLILYIEIARLF 362 (1196)
Q Consensus 287 ~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a--~~L~-~~~~~~ei~~~L~~a~~~~~~ll~~-~dqi~i~~~lA~vy 362 (1196)
..|...-+.. ..|| .+.+.++.+ .+.. .....+++++.++.++..-.+..++ ..++..|..++.+.
T Consensus 163 ~~a~~~~~ai-------~~~p---~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl 232 (394)
T 3txn_A 163 TSARTTANAI-------YCPP---KVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIM 232 (394)
T ss_dssp HHHHHHHHHS-------CCCH---HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhccC-------CCCH---HHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHH
Confidence 3333222211 1223 245677754 3555 5666677877777775331122212 34577888888877
Q ss_pred ccCCchhh
Q 045708 363 GTLDYQRK 370 (1196)
Q Consensus 363 ~~LGf~RK 370 (1196)
..--+..+
T Consensus 233 ~~~r~el~ 240 (394)
T 3txn_A 233 LGQSDDVN 240 (394)
T ss_dssp TTCGGGHH
T ss_pred cCCHHHHH
Confidence 65433333
No 166
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=44.28 E-value=36 Score=36.87 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=58.6
Q ss_pred CcceeecceeeEEEEecCchhcccceeeeeeccCCCccccCCCCCcEEecccccccccccCCCCceeEEEEEEEEecceE
Q 045708 1074 GSVLAHDMTPMEVLVRNNTKEMIKMSLSITCRDVAGENCIEGTKPTVLWSGVLNEITMEVPPLQESKHCFSLYFLVPGEY 1153 (1196)
Q Consensus 1074 ~~~~~~~~~~~~v~v~n~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~l~~g~~ 1153 (1196)
.++.-.|-..+.+.|.|++.+.++..+.+.--+ ..|...+. +........|+++++..+.|-+..+..|+.
T Consensus 90 ~sv~rGE~~~l~~~V~Ny~~~~~~v~V~l~~~~---~~~~~~~~------~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~ 160 (252)
T 3hrz_B 90 YSVVKNEQVEIRAILHNYVNEDIYVRVELLYNP---AFCSASTK------GQRYRQQFPIKALSSRAVPFVIVPLEQGLH 160 (252)
T ss_dssp SCEETTCCEEEEEEEEECSSSCEEEEEEECCCT---TEEESCCS------SCCEEEEEEECTTEEEEEEEEEEECSSEEE
T ss_pred cEEeeCCEEEEEEEEEcccCceEEEEEEEEcCC---ceEeecCC------CCceEEEEEECCCCeEEEEEEEEeccCCcE
Confidence 345667889999999999999988888764322 35655432 111223578899999999999999999998
Q ss_pred EEEEEEEe
Q 045708 1154 TLVAAAVI 1161 (1196)
Q Consensus 1154 ~~~~~~~~ 1161 (1196)
.+...|..
T Consensus 161 ~i~v~A~~ 168 (252)
T 3hrz_B 161 DVEIKASV 168 (252)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88877765
No 167
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=43.07 E-value=25 Score=41.54 Aligned_cols=116 Identities=16% Similarity=0.265 Sum_probs=53.4
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
.-..+||.|.-.|+|.+|...|+.+ +.|.=+|.+| .-+.. +.+|+..|+|+.
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-------~n~~~LA~~L------~~Lg~---------------yq~AVea~~KA~ 175 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTL------VHLGE---------------YQAAVDGARKAN 175 (449)
T ss_dssp -------------CTTTHHHHHHHT-------TCHHHHHHHH------HTTTC---------------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-------hhHHHHHHHH------HHhcc---------------HHHHHHHHHHcC
Confidence 5667899999999999999999975 3333333332 22211 444555555542
Q ss_pred CCCC--C---------C-------CCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 045708 298 IPDN--A---------Q-------RVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIA 359 (1196)
Q Consensus 298 ~p~n--~---------e-------~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA 359 (1196)
.+.. . + .. .+..+.+-...+..++...+...|+.+.|-.++..... ...++..+|
T Consensus 176 ~~~~Wk~v~~aCv~~~ef~lA~~~~l-~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~a------h~~~ftel~ 248 (449)
T 1b89_A 176 STRTWKEVCFACVDGKEFRLAQMCGL-HIVVHADELEELINYYQDRGYFEELITMLEAALGLERA------HMGMFTELA 248 (449)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHTTT-TTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTC------CHHHHHHHH
T ss_pred CchhHHHHHHHHHHcCcHHHHHHHHH-HHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHH------HHHHHHHHH
Confidence 1100 0 0 00 01122233334555666667777888888777654322 245677777
Q ss_pred HHhccCCch
Q 045708 360 RLFGTLDYQ 368 (1196)
Q Consensus 360 ~vy~~LGf~ 368 (1196)
-+|.+....
T Consensus 249 il~~ky~p~ 257 (449)
T 1b89_A 249 ILYSKFKPQ 257 (449)
T ss_dssp HHHHTTCHH
T ss_pred HHHHhcCHH
Confidence 777766443
No 168
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=42.50 E-value=1.4e+02 Score=31.97 Aligned_cols=84 Identities=5% Similarity=0.002 Sum_probs=51.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccC
Q 045708 286 YNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTL 365 (1196)
Q Consensus 286 ~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~L 365 (1196)
+.+|+..|.+... ..|. ..+..+.++.++...+...++...+.+++... .+++.+...++...+.++...
T Consensus 185 ~~~A~~~~~~al~-----~~p~---~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--~l~p~~~~~l~~~~~~~~~~~ 254 (308)
T 2ond_A 185 KSVAFKIFELGLK-----KYGD---IPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG--SLPPEKSGEIWARFLAFESNI 254 (308)
T ss_dssp HHHHHHHHHHHHH-----HHTT---CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSS--SSCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCCC---cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHc
Confidence 4566666666532 0011 14677888999988888888888888876531 123334556677777777777
Q ss_pred CchhhHHHHHHHHH
Q 045708 366 DYQRKAAFFSRQVA 379 (1196)
Q Consensus 366 Gf~RK~AF~lR~l~ 379 (1196)
|=.-+..-+.+.+.
T Consensus 255 g~~~~a~~~~~~a~ 268 (308)
T 2ond_A 255 GDLASILKVEKRRF 268 (308)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 75555444444443
No 169
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=42.36 E-value=13 Score=42.24 Aligned_cols=104 Identities=11% Similarity=0.082 Sum_probs=58.6
Q ss_pred eeeEEEEecCchhcccceeeeeeccCCCccccC--CCCCcEEeccccccc-------ccccCCCCceeEEEEE---EEE-
Q 045708 1082 TPMEVLVRNNTKEMIKMSLSITCRDVAGENCIE--GTKPTVLWSGVLNEI-------TMEVPPLQESKHCFSL---YFL- 1148 (1196)
Q Consensus 1082 ~~~~v~v~n~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~l~~~-------~~~~~~~~~~~~~~~~---~~l- 1148 (1196)
+.+.|.|+|+..++++++=- .=.|..-..-++ .....|-|.|++-+. ..+|+|||+.++.|-+ |=|
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~-~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKW-QLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGG-GSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeecc-CCCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 67899999999999876311 111211111111 112467778877553 3468899999999985 444
Q ss_pred ecceEEEEEEEEeecchhHHHhhcccCCCCCCceecCCCcEEEeccC
Q 045708 1149 VPGEYTLVAAAVIDDANNILRARARTDSPDEPIFCRGPPFHVRVSGT 1195 (1196)
Q Consensus 1149 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1195 (1196)
-+|+|++.+..... ++ ....-..+-+.+-.++++|.|.
T Consensus 117 ~gG~y~v~~~g~~~-a~--------~~~i~~~~~~~Sn~~~~~vdg~ 154 (343)
T 2x3c_A 117 AQGQYSIRYQLPAR-RK--------RPRAKQAQASESNAITLWVEGV 154 (343)
T ss_dssp SCEEEEEEEC-------------------------CCCCEEEEECCC
T ss_pred CCceEEEEEeeecc-CC--------CCccccccccccccEEEeecch
Confidence 47999999987765 21 1111123346777788888774
No 170
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=42.28 E-value=59 Score=38.00 Aligned_cols=77 Identities=6% Similarity=-0.154 Sum_probs=56.7
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhcc--CCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHH
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARL--TADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHY 293 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~--~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY 293 (1196)
.+...-+|..|.-.|+|.+|+..|..|+++.++ ..||--.|.++-.++.+..- .| . .++....+.+|+.++
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~--qg--~---~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG--LE--N---KAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH--TT--C---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh--cc--C---HHHHHHHHHHHHHHH
Confidence 345566889999999999999999999999887 68888899888877533222 11 1 135556678888888
Q ss_pred hhcCCC
Q 045708 294 RKSFIP 299 (1196)
Q Consensus 294 ~ks~~p 299 (1196)
.+...|
T Consensus 413 ~~~lG~ 418 (433)
T 3qww_A 413 EVAHGK 418 (433)
T ss_dssp HHHTCT
T ss_pred HHHcCC
Confidence 777543
No 171
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=41.46 E-value=68 Score=36.33 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=30.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccC
Q 045708 286 YNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADG 341 (1196)
Q Consensus 286 ~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~ 341 (1196)
+.+|+..|.++.. ..|. ..++...++.++...+...++.+.+.++...
T Consensus 431 ~~~A~~~~~~a~~-----~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 431 FIEATNLLEKASK-----LDPR---SEQAKIGLAQMKLQQEDIDEAITLFEESADL 478 (514)
T ss_dssp HHHHHHHHHHHHH-----HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCcc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 5667777766531 0011 1367777888888888888888888777654
No 172
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=40.33 E-value=53 Score=44.96 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=51.8
Q ss_pred ceeEEecCeEEEEEEEECCCcceEEEeEEEEEeecceeee-------eeeeEEECCCCeeEEEEEEEeCeeeeEEE
Q 045708 571 ELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDA-------FPISVELPPNSSKVITLSGIPTSVGPVTI 639 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes-------~~~si~L~P~S~~~I~Lsg~P~~~G~L~I 639 (1196)
..-++.||.+++.+++.|=..-+++|+ +.|..++ .|+. ....+.|+|++.++|.+.++|+..|.+.|
T Consensus 821 Pysv~rGEq~~l~v~VfNy~~~~~~V~-V~L~~s~-~~~~~~~~~~~~~q~v~v~a~~~~~v~f~i~p~~~G~~~i 894 (1642)
T 3prx_B 821 PYSVVKNEQVEIRAILHNYVNEDIYVR-VELLYNP-AFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDV 894 (1642)
T ss_dssp CSCEETTCCEEEEEEEEECSSSCEEEE-EEECCCT-TEEESCCSSSCCEEEEEECSSEEEEEEEEEEECSCEEEEE
T ss_pred CCEEecCCEEEEEEEEEcCCCCcEEEE-EEEEcCC-CeEeeccCCCcceeEEEECCCCeEEEEEEEEEeecccEEE
Confidence 445899999999999999888776663 4444432 2332 23569999999999999999999998765
No 173
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=39.81 E-value=1e+02 Score=28.57 Aligned_cols=32 Identities=19% Similarity=-0.061 Sum_probs=26.9
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
.+....+|..++..|+|.+|+..|..|+....
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 78 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDK 78 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 34555689999999999999999999998643
No 174
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=39.70 E-value=1e+02 Score=35.02 Aligned_cols=36 Identities=14% Similarity=0.012 Sum_probs=25.9
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhH
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWY 255 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWl 255 (1196)
.-.+|.++...|++.+|+..|..|+.+- ..+-..|+
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~ 135 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWH 135 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHH
Confidence 3447788888899999999999998643 34444443
No 175
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=39.24 E-value=41 Score=38.59 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=43.7
Q ss_pred EEecccEEEEEEEEEeccccccceEEEEEecCCCcceE---EEec--cccccccCCCCCCEEEEEEEEEE
Q 045708 712 ILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQDSII---SIAS--ETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 712 mLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~---~~e~--e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
.-+.||...+++++.|.|+.+|+.|++++.....-.+| .|-. ...+..-+|.||++.+=.+.+.-
T Consensus 223 ~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~Va~~E~~epV~pgst~~k~~~l~P 292 (380)
T 3ugu_A 223 IYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVP 292 (380)
T ss_dssp EEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEEEEEEECSCCBCTTEEEEEEEEECC
T ss_pred cCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEEEEEeccCCcCCCCCeEEeeEEEEE
Confidence 35899999999999999999999999998652211111 1100 01122339999999776666654
No 176
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=38.82 E-value=1.7e+02 Score=25.31 Aligned_cols=93 Identities=22% Similarity=0.244 Sum_probs=53.2
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCC
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFI 298 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~ 298 (1196)
...+|..+...|++.+|+..|..++..... ....|+. ++. +.. ..+ .+.+|+..|.+...
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~-----l~~-~~~-~~~------------~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYN-----LGN-AYY-KQG------------DYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHH-----HHH-HHH-TTT------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHH-----HHH-HHH-Hhc------------CHHHHHHHHHHHHH
Confidence 345789999999999999999999875432 2222221 111 111 111 14445555544321
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhc
Q 045708 299 PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAA 339 (1196)
Q Consensus 299 p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~ 339 (1196)
..|. ..++...++..+...+...++.+.+.++.
T Consensus 98 -----~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 130 (136)
T 2fo7_A 98 -----LDPR---SAEAWYNLGNAYYKQGDYDEAIEYYQKAL 130 (136)
T ss_dssp -----HCTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred -----hCCC---ChHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 0011 13566677887877777777777766554
No 177
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=38.42 E-value=47 Score=33.53 Aligned_cols=27 Identities=15% Similarity=-0.047 Sum_probs=23.2
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHH
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
.--+|..+...|+|.+|+..|..|+++
T Consensus 60 ~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 60 HAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 344578888899999999999999996
No 178
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=38.13 E-value=98 Score=41.77 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=22.2
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHH
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALE 260 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALE 260 (1196)
.+||.|.-.|+|..|+..|..| ++|.-+|.+|.
T Consensus 1200 ~iGd~le~eg~YeeA~~~Y~kA-------~ny~rLA~tLv 1232 (1630)
T 1xi4_A 1200 QVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLV 1232 (1630)
T ss_pred HHHHHHHhcCCHHHHHHHHHhh-------hHHHHHHHHHH
Confidence 3778888888888888887775 34444554443
No 179
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=38.05 E-value=1.6e+02 Score=31.48 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=67.8
Q ss_pred CChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCCch
Q 045708 230 GSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIPDNAQRVSPLS 309 (1196)
Q Consensus 230 G~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p~n~e~~p~l~ 309 (1196)
|++.+|...|..|+..+...+..+|..-+.= +...+ .+++|...|.++.. .++-.
T Consensus 78 ~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~-------~~~~~------------~~~~A~~~~~~al~------~~p~~ 132 (308)
T 2ond_A 78 LFSDEAANIYERAISTLLKKNMLLYFAYADY-------EESRM------------KYEKVHSIYNRLLA------IEDID 132 (308)
T ss_dssp HHHHHHHHHHHHHHTTTTTTCHHHHHHHHHH-------HHHTT------------CHHHHHHHHHHHHT------SSSSC
T ss_pred cchHHHHHHHHHHHHHhCcccHHHHHHHHHH-------HHhcC------------CHHHHHHHHHHHHh------ccccC
Confidence 4459999999999986655666677553320 11111 26677888887652 11211
Q ss_pred hhHH-HHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh-ccCCchhhHHHHHHHH
Q 045708 310 FELE-ATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLF-GTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 310 ~~~E-a~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy-~~LGf~RK~AF~lR~l 378 (1196)
.+ +-+.++.++...+...++.+.+.+++..... ...+|...|.+. ...|-.-++--+.+.+
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~------~~~~~~~~a~~~~~~~~~~~~A~~~~~~a 195 (308)
T 2ond_A 133 --PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART------RHHVYVTAALMEYYCSKDKSVAFKIFELG 195 (308)
T ss_dssp --THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC------CTHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 13 6777888888877778888888888764221 133455555542 2345444443333333
No 180
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=37.95 E-value=83 Score=36.58 Aligned_cols=78 Identities=12% Similarity=-0.092 Sum_probs=56.3
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhcc--CCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARL--TADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~--~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
..+..-.+|..|.-.|+|.+|+..|..|+.+.++ ..+|--.|.++=-++.+..- .| . .++....+.+|+.+
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~--~g--~---~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH--QG--M---FPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH--TT--C---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh--cC--C---HHHHHHHHHHHHHH
Confidence 3445556888899999999999999999999877 57888888887766533222 11 1 13555668888888
Q ss_pred HhhcCCC
Q 045708 293 YRKSFIP 299 (1196)
Q Consensus 293 Y~ks~~p 299 (1196)
+.+...|
T Consensus 401 ~~~~lG~ 407 (429)
T 3qwp_A 401 MRVTHGR 407 (429)
T ss_dssp HHHHTCT
T ss_pred HHHhcCC
Confidence 8887543
No 181
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=37.60 E-value=63 Score=29.01 Aligned_cols=29 Identities=14% Similarity=0.038 Sum_probs=24.9
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
..-.+|..++..|+|.+|+..|..++...
T Consensus 41 ~~~~lg~~~~~~~~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 41 ALYWLGESYYATRNFQLAEAQFRDLVSRY 69 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHC
Confidence 34467999999999999999999998754
No 182
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=37.40 E-value=65 Score=41.39 Aligned_cols=67 Identities=24% Similarity=0.280 Sum_probs=50.3
Q ss_pred ceeEEecCeEEEEEEEECCCc-ceEEEeEEEEEeecceeee-------eeeeEEECCCCeeEEEEEEEeCeeeeEEE
Q 045708 571 ELIWVVGEPVQVLVELANPCG-FDLRVDSIYLSVHSGNFDA-------FPISVELPPNSSKVITLSGIPTSVGPVTI 639 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~-feL~I~sI~L~teGv~Fes-------~~~si~L~P~S~~~I~Lsg~P~~~G~L~I 639 (1196)
..-++.||.+++.+++.|=.. -++.++ +.|...+ .|+. ....+.|+|++.+.|.+.++|...|.+.|
T Consensus 88 P~~v~~GD~~~i~~~v~N~~~~~~~~v~-v~l~~~~-~~~~~~~~~~~~~~~v~l~~~~~~~v~f~i~~~~~G~~~i 162 (915)
T 2hr0_B 88 PYSVVRNEQVEIRAVLYNYRQNQELKVR-VELLHNP-AFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPLKTGLQEV 162 (915)
T ss_dssp CSEEETTCCEEEEEEEEECCSSCCEEEE-EEECCCT-TEECSCCSSSCEEEEEEECTTEEEEEEEEEEECSCEEEEE
T ss_pred CCEEecCcEEEEEEEEEcCCCCeeEEEE-EEEecCC-ceEeecCCCCcceeEEEECCCCeEEEEEEEEECccceEEE
Confidence 445899999999999999888 555542 3444332 1321 34679999999999999999999998765
No 183
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=37.37 E-value=39 Score=42.38 Aligned_cols=69 Identities=19% Similarity=0.191 Sum_probs=52.9
Q ss_pred ceeEEecCeEEEEEEEECCCcceEEEeEEEEEee-cceee---eeeeeEEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 571 ELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVH-SGNFD---AFPISVELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~feL~I~sI~L~te-Gv~Fe---s~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
..-++.||.+++.+++.|=..-.++++ +.|... +..+. .....+.|+|++...|.+.++|+..|.+.|+
T Consensus 161 P~~v~~GD~~~i~~~V~N~~~~~~~v~-v~l~~~~~~~~~~~~~~~~~~~v~a~~~~~v~f~i~~~~~G~~~i~ 233 (767)
T 4fxk_B 161 PMSVRRFEQLELRPVLYNYLDKNLTVS-VHVSPVEGLCLAGGGGLAQQVLVPAGSARPVAFSVVPTAAAAVSLK 233 (767)
T ss_dssp CSCEETTCEEEECCEEEECSSSCEEEE-EEECCCTTEECSSSSCCCEEEEECSSCEEECCEEEEECSCSEEEEE
T ss_pred CCeeccCCEEEEEEEEEECCCCCEEEE-EEEEecCCeEEecCCceeEEEEEcCCCeEEEEEEEEECccCcEEEE
Confidence 345899999999999999888777663 455443 32222 2346799999999999999999999998764
No 184
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=36.79 E-value=90 Score=33.64 Aligned_cols=27 Identities=11% Similarity=0.108 Sum_probs=16.9
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHH
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALE 244 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~ 244 (1196)
....+++++...|++..|++.|.+.+.
T Consensus 67 a~~~la~~~~~~~~~~~A~~~l~~ll~ 93 (291)
T 3mkr_A 67 AVRMFAEYLASHSRRDAIVAELDREMS 93 (291)
T ss_dssp HHHHHHHHHHCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHh
Confidence 344466666666667777776666553
No 185
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=36.58 E-value=25 Score=43.34 Aligned_cols=74 Identities=15% Similarity=0.096 Sum_probs=44.2
Q ss_pred HHHHHHHHhhcCC--CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhc
Q 045708 286 YNSVILHYRKSFI--PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFG 363 (1196)
Q Consensus 286 ~~~ai~lY~ks~~--p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~ 363 (1196)
+++|+..|.++.. |.+ .++...++..+...+...+ .+.+.+++..+. +....+..+|.+|.
T Consensus 483 ~~~A~~~~~~al~l~P~~----------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P------~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 483 YDSATKHFTEVLDTFPGE----------LAPKLALAATAELAGNTDE-HKFYQTVWSTND------GVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHSTTC----------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC----------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCC------chHHHHHHHHHHHH
Confidence 6778888877642 211 2555666666665555555 666666543211 12346778888888
Q ss_pred cCCchhhHHHHHH
Q 045708 364 TLDYQRKAAFFSR 376 (1196)
Q Consensus 364 ~LGf~RK~AF~lR 376 (1196)
.+|-.-++.-.++
T Consensus 546 ~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 546 AEGDRVGAVRTLD 558 (681)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 8887665544444
No 186
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=35.94 E-value=33 Score=31.14 Aligned_cols=30 Identities=10% Similarity=0.051 Sum_probs=26.4
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHHhccCC
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALELARLTA 250 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~ 250 (1196)
-+|..++..|+|..|..+|.+|+......+
T Consensus 10 ~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~ 39 (104)
T 2v5f_A 10 ELGKVAYTEADYYHTELWMEQALRQLDEGE 39 (104)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhccC
Confidence 479999999999999999999999876543
No 187
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=35.57 E-value=77 Score=30.24 Aligned_cols=66 Identities=15% Similarity=0.056 Sum_probs=47.2
Q ss_pred EEecCeEEEEEEEECCCcceEEEeEEEEEeecceeeeeeeeE-EECCCCeeEEEEEEEeC-eeeeEEEce
Q 045708 574 WVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPISV-ELPPNSSKVITLSGIPT-SVGPVTIPG 641 (1196)
Q Consensus 574 ~V~gE~~ev~VtLqNPf~feL~I~sI~L~teGv~Fes~~~si-~L~P~S~~~I~Lsg~P~-~~G~L~I~G 641 (1196)
.++|+.+.|.++++|.=.-.-.=-.+.|..+|...... .+ .|.++.+.++.++.+|+ ..|+..|.-
T Consensus 15 ~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g~~v~t~--~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a 82 (114)
T 2l0d_A 15 VVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQ--TVTSLESENSTNVDFHWTLDGTANSYTLTV 82 (114)
T ss_dssp ECTTSEEEEEEEEEECSSSCBCCEEEEEEETTEEEEEE--EESCBCBTCEEEEEEEEECCCSCSEEEEEE
T ss_pred cCCCCeEEEEEEEEECCCCCCCCEEEEEEECCEEEcce--ecccccCCCEEEEEEEEeecCcCceEEEEE
Confidence 67899999999999975443333444455566533322 23 48899999999999999 589887754
No 188
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=34.83 E-value=25 Score=39.97 Aligned_cols=61 Identities=18% Similarity=0.311 Sum_probs=42.0
Q ss_pred ccEEEEEEEEEeccccccceEEEEEecCCCcceEEEecc--c--------------cccccCCCCCCEEEEEEEEEE
Q 045708 716 GEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASE--T--------------LKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 716 GE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e--~--------------~~~~~~I~PG~s~t~~i~v~g 776 (1196)
.+-..++++|+|+|+.|+++++.-+-|+.....+++..+ . ..+-..|+||++++..+.+-.
T Consensus 35 ~~~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~ 111 (343)
T 2x3c_A 35 TDDVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSG 111 (343)
T ss_dssp SSCCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTT
T ss_pred CCCeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhh
Confidence 455789999999999999887764334333344544221 0 123478999999999999854
No 189
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=34.65 E-value=3e+02 Score=29.42 Aligned_cols=119 Identities=13% Similarity=-0.042 Sum_probs=69.7
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCchh--hHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhc
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTADYF--WYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKS 296 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~L--WlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks 296 (1196)
.-.+|.+++..|++.+|++.|..++.. ..|.. .++.++-.+ .. .. .++.+|+..|.+.
T Consensus 133 ~~~l~~~~~~~g~~~~A~~~l~~~~~~---~p~~~~~~l~~a~~~l----~~-~~------------~~~~eA~~~~~~~ 192 (291)
T 3mkr_A 133 MAMTVQILLKLDRLDLARKELKKMQDQ---DEDATLTQLATAWVSL----AA-GG------------EKLQDAYYIFQEM 192 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHH----HH-CT------------THHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhh---CcCcHHHHHHHHHHHH----Hh-Cc------------hHHHHHHHHHHHH
Confidence 345677888888888888888887765 23332 222222111 01 10 2366677777665
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhH
Q 045708 297 FIPDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKA 371 (1196)
Q Consensus 297 ~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~ 371 (1196)
.. ..|. ..++..-++..+...+...++.+.+.+++.... +....+..++.+|...|=.-.+
T Consensus 193 l~-----~~p~---~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p------~~~~~l~~l~~~~~~~g~~~ea 253 (291)
T 3mkr_A 193 AD-----KCSP---TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDS------GHPETLINLVVLSQHLGKPPEV 253 (291)
T ss_dssp HH-----HSCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCCHHH
T ss_pred HH-----hCCC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCCHHH
Confidence 31 0111 135556677777778888888888888765422 2234566777777778754443
No 190
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=34.03 E-value=30 Score=31.35 Aligned_cols=45 Identities=20% Similarity=0.093 Sum_probs=31.7
Q ss_pred ccceeeehhHhhhcCChHHHHHHHHHHHHHhccC-CchhhHHHhHH
Q 045708 216 ARAQKTIGDYCLLAGSPVDANAHYSTALELARLT-ADYFWYAGALE 260 (1196)
Q Consensus 216 GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~-~D~LWlAsALE 260 (1196)
.+..-.+|..++..|+|.+|+..|..|+..--.. .-+.++|.++.
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 72 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLY 72 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 3455678999999999999999999999764332 22334555444
No 191
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=32.78 E-value=1e+02 Score=27.64 Aligned_cols=17 Identities=24% Similarity=0.262 Sum_probs=10.1
Q ss_pred cCChHHHHHHHHHHHHH
Q 045708 229 AGSPVDANAHYSTALEL 245 (1196)
Q Consensus 229 aG~~~DAL~~Y~eAi~~ 245 (1196)
.|++.+|+..|..|++.
T Consensus 3 ~g~~~~A~~~~~~al~~ 19 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIAS 19 (117)
T ss_dssp ----CCCHHHHHHHHSS
T ss_pred CCcHHHHHHHHHHHHHc
Confidence 47778888888887764
No 192
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=32.63 E-value=33 Score=29.68 Aligned_cols=25 Identities=12% Similarity=-0.048 Sum_probs=22.3
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
.|..++..|+|.+|+..|..|+..-
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~ 30 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTE 30 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 5888999999999999999999754
No 193
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=32.33 E-value=50 Score=28.47 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=25.9
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
..-.+|..++..|+|.+|++.|..|+..-.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 455689999999999999999999997644
No 194
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=31.96 E-value=76 Score=36.74 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=43.8
Q ss_pred EEecccEEEEEEEEEeccccccceEEEEEecCCC-----cceEEEeccccccccCCCCCCEEEEEEEEE
Q 045708 712 ILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQ-----DSIISIASETLKSALPLKPGAEVIIPVTLK 775 (1196)
Q Consensus 712 mLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~-----~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~ 775 (1196)
--+.||+..+++++.|.|+.+|+.|.+++..-.+ ..-+.---..+...-+|.||.+.+..+.+.
T Consensus 204 ~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va~~e~~e~V~pgst~~k~~~L~ 272 (392)
T 1suj_A 204 IYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVCAEETNDTVAANSTLSKTFSVT 272 (392)
T ss_dssp EEETTCCEEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEEEEECCCCBCTTEEEEEEEEEC
T ss_pred cccCCCEEEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEEEEecCCCcCCCCEEEEEEEEe
Confidence 4589999999999999999999999998865211 011100000122234999999988777775
No 195
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=29.59 E-value=3.1e+02 Score=29.08 Aligned_cols=125 Identities=10% Similarity=-0.038 Sum_probs=71.7
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcCCC
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSFIP 299 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~~p 299 (1196)
-.+|..++..|++.+|+..|..|+..-- .+...|++ ++.+ ++ ..+ ++.+|+..|.+...
T Consensus 121 ~~~a~~~~~~g~~~~A~~~~~~al~~~P-~~~~a~~~-----la~~-~~-~~g------------~~~~A~~~l~~~~~- 179 (287)
T 3qou_A 121 AQQAMQLMQESNYTDALPLLXDAWQLSN-QNGEIGLL-----LAET-LI-ALN------------RSEDAEAVLXTIPL- 179 (287)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTT-SCHHHHHH-----HHHH-HH-HTT------------CHHHHHHHHTTSCG-
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhCC-cchhHHHH-----HHHH-HH-HCC------------CHHHHHHHHHhCch-
Confidence 3578899999999999999999987433 33333332 2211 11 111 27889999998752
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 045708 300 DNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGTLDYQRKAAFFSRQV 378 (1196)
Q Consensus 300 ~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~LGf~RK~AF~lR~l 378 (1196)
..|. . ....+..+..+..++...++.+.+.+++.... +....+..+|.+|...|=.-++.=.++.+
T Consensus 180 ----~~p~--~-~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P------~~~~~~~~la~~l~~~g~~~~A~~~l~~~ 245 (287)
T 3qou_A 180 ----QDQD--T-RYQGLVAQIELLXQAADTPEIQQLQQQVAENP------EDAALATQLALQLHQVGRNEEALELLFGH 245 (287)
T ss_dssp ----GGCS--H-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----hhcc--h-HHHHHHHHHHHHhhcccCccHHHHHHHHhcCC------ccHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 1111 1 13333444334444444445566665543211 23456777888888888766665555553
No 196
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=29.58 E-value=50 Score=29.44 Aligned_cols=26 Identities=8% Similarity=-0.160 Sum_probs=15.1
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHH
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
..+|..++..|+|.+|++.|..|+..
T Consensus 54 ~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 54 SNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34555566666666666666666554
No 197
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=29.30 E-value=45 Score=29.86 Aligned_cols=29 Identities=21% Similarity=0.134 Sum_probs=19.5
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
..-.+|..++..|+|.+|+..|..|+..-
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 49 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFD 49 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 34456777777777777777777777643
No 198
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=29.17 E-value=1.3e+02 Score=33.12 Aligned_cols=32 Identities=19% Similarity=0.049 Sum_probs=27.7
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
.......+|..++..|+|.+|+..|..|+.+-
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34566679999999999999999999999864
No 199
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=29.07 E-value=1.4e+02 Score=26.45 Aligned_cols=37 Identities=22% Similarity=0.207 Sum_probs=24.1
Q ss_pred cccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCc
Q 045708 215 LARAQKTIGDYCLLAGSPVDANAHYSTALELARLTAD 251 (1196)
Q Consensus 215 ~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D 251 (1196)
.......+|..++..|++.+|+..|..|+.+.....|
T Consensus 52 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 52 YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 3445556677777777777777777777766554444
No 200
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=28.89 E-value=1e+02 Score=41.27 Aligned_cols=69 Identities=22% Similarity=0.267 Sum_probs=52.3
Q ss_pred ceeEEecCeEEEEEEEECCCcceEEEeEEEEEee--cceeee-------eeeeEEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 571 ELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVH--SGNFDA-------FPISVELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~feL~I~sI~L~te--Gv~Fes-------~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
..-++.||.+++.+++.|=..-++.++ +.|..+ +..|.. ....+.|++++.+.+.+.++|...|.+.|+
T Consensus 673 P~~v~~Gd~~~l~~~v~N~~~~~~~v~-v~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~f~i~~~~~G~~~i~ 750 (1325)
T 2pn5_A 673 PYSIKRGEAVVLQFTLFNNLGAEYIAD-VTLYNVANQTEFVGRPNTDLSYTKSVSVPPKVGVPISFLIKARKLGEMAVR 750 (1325)
T ss_dssp CSEEETTCEEEEEEEEEECSSSCEEEE-EEEECGGGCEEETTSCTTCCEEEEEEEECTTCCEEEEEEEEECSSEEEEEE
T ss_pred CcEEEcCCEEEEEEEEEeCCCCcEEEE-EEEeecCCceEEeccCCCCCcceEEEEECCCCeEEEEEEEEEcccceEEEE
Confidence 445899999999999999888776653 455443 234432 245699999999999999999998876543
No 201
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=28.56 E-value=1.2e+02 Score=29.09 Aligned_cols=49 Identities=2% Similarity=-0.029 Sum_probs=35.5
Q ss_pred EEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEE
Q 045708 720 DVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 720 ~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
..+++|+|.++.+|-| +++..+ ...|.+.. .-..|+||+++.+.|+.++
T Consensus 26 ~~~l~L~N~t~~~vAF-KVKtT~---p~~YrVrP----~~G~I~Pg~~~~I~I~~q~ 74 (116)
T 1m1s_A 26 NSTHNITSESDSRLAF-KVKSSN---NEHYRVRP----VYGFVDAKGKSKLDINRLP 74 (116)
T ss_dssp EEEEEEEECSSSEEEE-EEEESC---TTTEEEEC----SEEEECTTCEEEEEEEECS
T ss_pred EEEEEEECCCCCeEEE-EEEecC---CCceEEcC----CceEECCCCeEEEEEEeCC
Confidence 7899999999987733 444433 44555442 2357899999999999987
No 202
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=28.02 E-value=1.7e+02 Score=33.56 Aligned_cols=76 Identities=12% Similarity=0.102 Sum_probs=42.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCchhhHHHHHHHHHHHhh----ccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 045708 285 RYNSVILHYRKSFIPDNAQRVSPLSFELEATLKLARFLCR----RELAKDVVELLTSAADGAKSLIDASDRLILYIEIAR 360 (1196)
Q Consensus 285 ~~~~ai~lY~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L~~----~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~ 360 (1196)
.+.+|+..|+++.... ..++...++.++.. .....++.+++.++...+ ....+..++.
T Consensus 346 ~~~~A~~~~~~a~~~~----------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--------~~~a~~~Lg~ 407 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAKG----------EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--------LSAAQVQLGE 407 (490)
T ss_dssp HHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--------CHHHHHHHHH
Confidence 3677777887764210 13677777777765 445567777777765431 1234555666
Q ss_pred Hhcc----CCchhhHHHHHHHH
Q 045708 361 LFGT----LDYQRKAAFFSRQV 378 (1196)
Q Consensus 361 vy~~----LGf~RK~AF~lR~l 378 (1196)
+|.. .|=..++..+.+.+
T Consensus 408 ~y~~g~g~~~d~~~A~~~~~~A 429 (490)
T 2xm6_A 408 IYYYGLGVERDYVQAWAWFDTA 429 (490)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHH
Confidence 6654 44444444444443
No 203
>2xsk_A CSGC; chaperone; 1.70A {Escherichia coli} PDB: 2y2y_A 2y2t_A
Probab=27.89 E-value=90 Score=29.17 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=41.7
Q ss_pred EEEEECCCcceEEEeEEEEEeecceeeeeeeeEEECCCCeeE---EEEEEEeCeeeeE
Q 045708 583 LVELANPCGFDLRVDSIYLSVHSGNFDAFPISVELPPNSSKV---ITLSGIPTSVGPV 637 (1196)
Q Consensus 583 ~VtLqNPf~feL~I~sI~L~teGv~Fes~~~si~L~P~S~~~---I~Lsg~P~~~G~L 637 (1196)
.|||.+|+.+.|+|..++=-..|-.-......+.||||.... +.|.+.|-..-++
T Consensus 22 qVTlt~aC~CqV~i~~~R~G~~GqS~SqQ~~tl~lpANqpi~L~~lslnI~~~D~vkI 79 (110)
T 2xsk_A 22 EVTLTQSXLXRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKI 79 (110)
T ss_dssp EEECSSCEEEEEEEEEEEECSSCEEEEEEEEEEEECSSSEEECCCEEEECCTTCEEEE
T ss_pred EEEeeccceeeEEEEEEEeccCCcceeeccceEecCCCCcceeeeEEEEecCCCcEEE
Confidence 599999999999999998777777666677789999998763 5555555444333
No 204
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=27.60 E-value=1e+02 Score=41.75 Aligned_cols=68 Identities=18% Similarity=0.117 Sum_probs=52.9
Q ss_pred ceeEEecCeEEEEEEEECCCcceEEEeEEEEEeec-ceeee---eeeeEEECCCCeeEEEEEEEeCeeeeEEE
Q 045708 571 ELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVHS-GNFDA---FPISVELPPNSSKVITLSGIPTSVGPVTI 639 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~feL~I~sI~L~teG-v~Fes---~~~si~L~P~S~~~I~Lsg~P~~~G~L~I 639 (1196)
..-++.||.+++.+++.|=..-.+++ .+.|..++ ..+.. ...++.|++++.+++.+.++|+..|.+.|
T Consensus 776 P~sv~rGE~~~l~~~V~N~~~~~~~v-~V~l~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~~~G~~~i 847 (1451)
T 4acq_A 776 PYSVIRGEAFTLKATVLNYLPKCIRV-SVQLEASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNF 847 (1451)
T ss_dssp CSEEESSSCEEEEEEEEECSSSCEEE-EEEECCCTTEEEEESCSCCCCEEECTTEEEEEEEEEEECSCEEEEE
T ss_pred CceEecCCEEEEEEEEEeccCccEEE-EEEEEcCCCeEeecCCCCceEEEECCCCeEEEEEEEEECccceEEE
Confidence 44589999999999999988877766 35665554 23322 24569999999999999999999998765
No 205
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=27.15 E-value=44 Score=27.89 Aligned_cols=25 Identities=32% Similarity=0.406 Sum_probs=13.6
Q ss_pred eehhHhhhcCChHHHHHHHHHHHHH
Q 045708 221 TIGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 221 vlGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
.+|..++..|++.+|+..|..|+..
T Consensus 48 ~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 48 NLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3455555555555555555555543
No 206
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=26.39 E-value=5e+02 Score=25.96 Aligned_cols=26 Identities=12% Similarity=-0.095 Sum_probs=22.6
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
+|..++..|+|.+|+..|..++...-
T Consensus 10 ~a~~~~~~g~~~~A~~~~~~~~~~~p 35 (225)
T 2yhc_A 10 TAQQKLQDGNWRQAITQLEALDNRYP 35 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 57889999999999999999997543
No 207
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.99 E-value=4.9e+02 Score=30.12 Aligned_cols=149 Identities=13% Similarity=0.083 Sum_probs=87.2
Q ss_pred CChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH--HHHhhhcc----------CCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 230 GSPVDANAHYSTALELARLTADYFWYAGALEGSV--CALLVDRM----------GQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 230 G~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~--~~llL~~~----------~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
|.+..|+..|..--..+|..+|..|...++..++ |.-. ..| .....++...+...++.++.......
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~-~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~~~~ 108 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASR-NKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSK 108 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHH-SCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 5577888888776667788899999888888774 3211 011 11122222333334444444433221
Q ss_pred CCC------------C-CCCCCCchh-hHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhc
Q 045708 298 IPD------------N-AQRVSPLSF-ELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFG 363 (1196)
Q Consensus 298 ~p~------------n-~e~~p~l~~-~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~ 363 (1196)
+.+ . .++--.+-. ......++|+++-+.+...++++.|....-.....++-.+++.+|...+.+|-
T Consensus 109 ~~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l 188 (445)
T 4b4t_P 109 SLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI 188 (445)
T ss_dssp TTHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 100 0 000001100 13456788888888888888988888654333446777888888888888887
Q ss_pred cCCchhhHHHHHHHHH
Q 045708 364 TLDYQRKAAFFSRQVA 379 (1196)
Q Consensus 364 ~LGf~RK~AF~lR~l~ 379 (1196)
..|=.-|+-.+++.+.
T Consensus 189 ~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 189 LKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHH
Confidence 7776666666666543
No 208
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=25.50 E-value=48 Score=27.64 Aligned_cols=29 Identities=31% Similarity=0.320 Sum_probs=25.1
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
....+|..++..|+|.+|+..|..|+...
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 39 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELD 39 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 44567999999999999999999999764
No 209
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=25.23 E-value=41 Score=31.39 Aligned_cols=27 Identities=11% Similarity=-0.109 Sum_probs=23.8
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHH
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALEL 245 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~ 245 (1196)
.-.+|..++..|+|.+|+..|..|+.+
T Consensus 50 ~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 50 YSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 345789999999999999999999975
No 210
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.07 E-value=3.1e+02 Score=31.63 Aligned_cols=126 Identities=16% Similarity=0.122 Sum_probs=69.1
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHH----HHHhhhccCCCchhhHHHHHHHHHHHHHH
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSV----CALLVDRMGQKDAVLEEEVKFRYNSVILH 292 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~----~~llL~~~~~~~~~~~~ei~~~~~~ai~l 292 (1196)
|...-+|++|+-.|.+..|++.|.++.+-.-..+ .-+|.+. +.+....| ..+...++.|-.+
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~------~kid~~l~~irl~l~~~d~--------~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG------AKIDVMLTIARLGFFYNDQ--------LYVKEKLEAVNSM 197 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC------SHHHHHHHHHHHHHHHTCH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH------HHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHh
Confidence 3566799999999999999999999888765543 2344432 22222112 2333445555554
Q ss_pred HhhcCCCCCCCCCCCchhhHHHHHHHHHHH--hhccchHHHHHHHHhhccCC-CCCCCHHHHHHHHHHHHHHhccCCchh
Q 045708 293 YRKSFIPDNAQRVSPLSFELEATLKLARFL--CRRELAKDVVELLTSAADGA-KSLIDASDRLILYIEIARLFGTLDYQR 369 (1196)
Q Consensus 293 Y~ks~~p~n~e~~p~l~~~~Ea~Lr~a~~L--~~~~~~~ei~~~L~~a~~~~-~~ll~~~dqi~i~~~lA~vy~~LGf~R 369 (1196)
..+... + ....-+|.+.-+ .......++++.+..++... ........++.+|+.++.+ +++.|
T Consensus 198 ~~~~~d--------~---~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~~e~~~~~~~~~y~~l~al---~~~~r 263 (429)
T 4b4t_R 198 IEKGGD--------W---ERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIELTSYESIATYASVTGL---FTLER 263 (429)
T ss_dssp HTTCCC--------T---HHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHH---HTTCH
T ss_pred hhcCCC--------H---HHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCCccchhhHHHHHHHHHHHHH---hcCCH
Confidence 444321 1 123445544333 34555667777776655432 1122224556677666654 34455
Q ss_pred h
Q 045708 370 K 370 (1196)
Q Consensus 370 K 370 (1196)
.
T Consensus 264 ~ 264 (429)
T 4b4t_R 264 T 264 (429)
T ss_dssp H
T ss_pred H
Confidence 4
No 211
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=25.02 E-value=98 Score=29.69 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=36.7
Q ss_pred ccEEEEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEE
Q 045708 716 GEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 716 GE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g 776 (1196)
|...+..|+|.|.|..+| -|++.. +....|.+. +....|.||+++.+.|.+++
T Consensus 26 ~~~~~~~l~L~N~s~~~v---aFKVKT-T~p~~y~Vr----P~~G~i~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 26 TDVVTTNLKLQNPSDRKV---CFKVKT-TAPRRYCVR----PNSGVIDPGSIVTVSVMLQP 78 (128)
T ss_dssp SSCEEEEEEEECCSSSCE---EEEEEE-SCGGGEEEE----SCEEEECTTCEEEEEEEECC
T ss_pred CceEEEEEEEECCCCCeE---EEEEEC-CCCCceEEe----CCCcEECCCCeEEEEEEECc
Confidence 356788999999998766 344432 223344443 23468999999999999887
No 212
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=24.68 E-value=36 Score=29.30 Aligned_cols=30 Identities=10% Similarity=-0.033 Sum_probs=25.4
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
....+|..++..|+|.+|+..|..|+....
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 345689999999999999999999997543
No 213
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=24.49 E-value=76 Score=29.69 Aligned_cols=42 Identities=17% Similarity=-0.037 Sum_probs=27.1
Q ss_pred eeeehhHhhhcCChHHHHHHHHHHHHHhccCCc-hhhHHHhHH
Q 045708 219 QKTIGDYCLLAGSPVDANAHYSTALELARLTAD-YFWYAGALE 260 (1196)
Q Consensus 219 ~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D-~LWlAsALE 260 (1196)
...+|..+...|+|.+|+..|..|+.+--...+ |+.+|-++.
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 97 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHL 97 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Confidence 345788888888888888888888876433222 233444443
No 214
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=23.81 E-value=1.5e+02 Score=28.41 Aligned_cols=72 Identities=15% Similarity=0.273 Sum_probs=45.7
Q ss_pred EEEEEEEEEeccccccceEEEEEecCCCcceEEEeccccccccCCCCCCEEEEEEEEEEcccCCCCccccccccccCCcc
Q 045708 718 IRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASETLKSALPLKPGAEVIIPVTLKAWQHGPVDPETVAGKIASGSIG 797 (1196)
Q Consensus 718 ~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~~~~~~~I~PG~s~t~~i~v~g~k~g~~~~~~~~~~~~~~~~~ 797 (1196)
..+..++|+|.|..+|-| .+.. +....|... +....|.||+++.+.|.+++.+.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaF---KVKT-T~p~~y~Vr----P~~Gii~P~~s~~v~V~~q~~~~~~---------------- 81 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGW---AIKT-TNMRRLSVD----PPCGVLDPKEKVLMAVSCDTFNAAT---------------- 81 (126)
T ss_dssp CCCEEEEEEECSSSCEEE---EEEE-SCTTTEEEE----SCEEEECTTCEEEEEEEECCCCGGG----------------
T ss_pred ceEEEEEEECCCCCeEEE---EEEc-CCCCcEEEE----CCCeEECCCCEEEEEEEecCCCCCC----------------
Confidence 466899999999977743 3322 112334332 2346899999999999998833221
Q ss_pred cccccCCCCeEEEEecccc
Q 045708 798 RHVKDVSSPSLLIHYAGLL 816 (1196)
Q Consensus 798 ~~~k~~t~~~i~i~Y~~~~ 816 (1196)
.+.....+.|+|....
T Consensus 82 ---~~~~kDKf~Vq~~~~p 97 (126)
T 1msp_A 82 ---EDLNNDRITIEWTNTP 97 (126)
T ss_dssp ---SCCSSCEEEEEEEECC
T ss_pred ---CccCCCEEEEEEEECC
Confidence 0112345999999863
No 215
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=23.76 E-value=2.4e+02 Score=31.88 Aligned_cols=117 Identities=6% Similarity=-0.055 Sum_probs=70.0
Q ss_pred eeeehhHhhhcCC-hHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 219 QKTIGDYCLLAGS-PVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 219 ~KvlGDl~LLaG~-~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
.-.+|..+...|+ |.+|+..|..|+.+- ..+-..|+.-+. ++. ..+ ++.+|+..|+++.
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l~-P~~~~a~~~~g~----~~~---~~g------------~~~eAl~~~~kal 193 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRRV----LVE---WLR------------DPSQELEFIADIL 193 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHHH----HHH---HHT------------CCTTHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHC-CCCHHHHHHHHH----HHH---Hcc------------CHHHHHHHHHHHH
Confidence 3456888888997 999999999999743 344445543221 111 112 1345556666553
Q ss_pred C--CCCCCCCCCchhhHHHHHHHHHHHhhccchHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhcc-CCchhhH
Q 045708 298 I--PDNAQRVSPLSFELEATLKLARFLCRRELAKDVVELLTSAADGAKSLIDASDRLILYIEIARLFGT-LDYQRKA 371 (1196)
Q Consensus 298 ~--p~n~e~~p~l~~~~Ea~Lr~a~~L~~~~~~~ei~~~L~~a~~~~~~ll~~~dqi~i~~~lA~vy~~-LGf~RK~ 371 (1196)
. |.+ .++....+..+...+...++.+.+.+++.... +-...+..++.+|.. .|+..++
T Consensus 194 ~ldP~~----------~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P------~~~~a~~~lg~~l~~l~~~~~eA 254 (382)
T 2h6f_A 194 NQDAKN----------YHAWQHRQWVIQEFKLWDNELQYVDQLLKEDV------RNNSVWNQRYFVISNTTGYNDRA 254 (382)
T ss_dssp HHCTTC----------HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCSCSHH
T ss_pred HhCccC----------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcCcchHH
Confidence 1 222 35666666666666666778888777764322 224566777777877 6664333
No 216
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=23.74 E-value=1.7e+02 Score=26.23 Aligned_cols=30 Identities=20% Similarity=-0.011 Sum_probs=26.0
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHh
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELA 246 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~l 246 (1196)
.....+|..++..|+|.+|+..|..|+.+-
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 68 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEKD 68 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 455668999999999999999999999864
No 217
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=23.69 E-value=69 Score=32.28 Aligned_cols=56 Identities=13% Similarity=0.221 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHHHhccCCchhh-HHHhHHHHHHHHhhhccCCCchhhHHHHHHHHHHHHHHHhhcC
Q 045708 232 PVDANAHYSTALELARLTADYFW-YAGALEGSVCALLVDRMGQKDAVLEEEVKFRYNSVILHYRKSF 297 (1196)
Q Consensus 232 ~~DAL~~Y~eAi~~lk~~~D~LW-lAsALEGi~~~llL~~~~~~~~~~~~ei~~~~~~ai~lY~ks~ 297 (1196)
+.+|+..|.+|+.+--...|.+| +|.|+-...-+ ...+ .+...++.+|+..|+|+.
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l--~P~~--------~~a~g~~~eA~~~~~kAl 118 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFL--TPDE--------TEAKHNFDLATQFFQQAV 118 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH--CCCH--------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhccc--Ccch--------hhhhccHHHHHHHHHHHH
Confidence 56999999999987554444444 66666533211 1111 234467899999999875
No 218
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=23.63 E-value=1.5e+02 Score=26.58 Aligned_cols=31 Identities=26% Similarity=0.097 Sum_probs=26.3
Q ss_pred cceeeehhHhhhcCChHHHHHHHHHHHHHhc
Q 045708 217 RAQKTIGDYCLLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 217 R~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
...-.+|..++..|+|.+|+..|..|+.+-.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p 74 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDG 74 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc
Confidence 3455679999999999999999999998643
No 219
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=22.67 E-value=47 Score=30.07 Aligned_cols=21 Identities=14% Similarity=0.047 Sum_probs=17.8
Q ss_pred hhcCChHHHHHHHHHHHHHhc
Q 045708 227 LLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 227 LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
=.+|+|.+|+..|.+|++.+-
T Consensus 27 D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHH
Confidence 567999999999999997543
No 220
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=22.41 E-value=1.4e+02 Score=40.89 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=51.1
Q ss_pred ceeEEecCeEEEEEEEECCCc-ceEEEeEEEEEeecceeee-------eeeeEEECCCCeeEEEEEEEeCeeeeEEEc
Q 045708 571 ELIWVVGEPVQVLVELANPCG-FDLRVDSIYLSVHSGNFDA-------FPISVELPPNSSKVITLSGIPTSVGPVTIP 640 (1196)
Q Consensus 571 ~~~~V~gE~~ev~VtLqNPf~-feL~I~sI~L~teGv~Fes-------~~~si~L~P~S~~~I~Lsg~P~~~G~L~I~ 640 (1196)
..-++.||.+++.+++.|=.. -+++++ +.|...+ .|+. ....+.|+|++.+.+.+.++|+..|.+.|+
T Consensus 835 P~sv~~GD~~~i~~~V~N~~~~~~~~v~-v~l~~~~-~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~ 910 (1661)
T 2b39_A 835 PYSVVRNEQVEIRAILYNYREAENLKVR-VELLYNP-AFCSLATAKKRHQQTITIPARSSVAVPYVIVPLKIGLHEVE 910 (1661)
T ss_dssp CSCEESSCEEEEEEEEEECCTTCCEEEE-EEECCCT-TEECSSCSSCCCEEEEEECTTCEEEEEEEEEECSCEEEEEE
T ss_pred CcEEEeCCEEEEEEEEEcCCCCccEEEE-EEEcCCC-CeEeecCCCCcceEEEEECCCCcEEEEEEEEEcccCeEEEE
Confidence 334899999999999999888 666543 4444332 2332 346799999999999999999999987543
No 221
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=21.83 E-value=6e+02 Score=28.90 Aligned_cols=31 Identities=29% Similarity=0.292 Sum_probs=20.0
Q ss_pred ccccceeeehhHhhh----cCChHHHHHHHHHHHH
Q 045708 214 RLARAQKTIGDYCLL----AGSPVDANAHYSTALE 244 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LL----aG~~~DAL~~Y~eAi~ 244 (1196)
......-.+|.+|+. .+++..|+++|..|++
T Consensus 145 ~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~ 179 (490)
T 2xm6_A 145 GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAE 179 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 344455566777766 6677777777777665
No 222
>1so9_A Cytochrome C oxidase assembly protein CTAG; immunoglobulin-like fold, copper protein, structural proteomics in europe, spine; NMR {Sinorhizobium meliloti} SCOP: b.146.1.1 PDB: 1sp0_A
Probab=21.75 E-value=1e+02 Score=31.33 Aligned_cols=63 Identities=17% Similarity=0.279 Sum_probs=48.2
Q ss_pred CcceEEecccEEEEEEEEEeccccccceEEEEEecCCCcceEEEeccc----c-------ccccCCCCCCEEEEEEEEEE
Q 045708 708 DGAIILYEGEIRDVWISLANAGTVPVEQAHISLSGKNQDSIISIASET----L-------KSALPLKPGAEVIIPVTLKA 776 (1196)
Q Consensus 708 ~~~vmLleGE~~~f~ItL~N~S~~pV~~l~~sf~d~~~~~i~~~e~e~----~-------~~~~~I~PG~s~t~~i~v~g 776 (1196)
+..+.+.-||+.....+.+|.|+.|| ....+|.+.... + =++..|+|||++.+|+...=
T Consensus 53 q~~v~V~pGE~~~~~y~a~N~sd~~i----------~G~A~ynV~P~~a~~YF~KieCFCF~eQ~L~pgE~~~MPV~F~I 122 (164)
T 1so9_A 53 QRDIDVRIGETVQIMYRAKNLASTPT----------TGQATFNVTPMAAGAYFNKVQCFCFTETTLEPGEEMEMPVVFFV 122 (164)
T ss_dssp CSEEEECTTCCCCEEEEEEECSSSCE----------ECCCEEEECSSSCSTTBTTSCCSSCSCCEECTTCEEEEEECCCB
T ss_pred eeEEEEcCCCeEEEEEEEECCCCCcE----------EEEECceeCHHHHhhhccceeeEcccCcccCCCCeEeeeEEEEE
Confidence 67788899999999999999999887 234555553321 1 12468999999999999887
Q ss_pred cccCC
Q 045708 777 WQHGP 781 (1196)
Q Consensus 777 ~k~g~ 781 (1196)
.|.+
T Consensus 123 -DP~i 126 (164)
T 1so9_A 123 -DPEI 126 (164)
T ss_dssp -CGGG
T ss_pred -CCCc
Confidence 7776
No 223
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=21.66 E-value=94 Score=29.67 Aligned_cols=41 Identities=20% Similarity=0.038 Sum_probs=27.4
Q ss_pred eeehhHhhhcCChHHHHHHHHHHHHHhccCCc-hhhHHHhHH
Q 045708 220 KTIGDYCLLAGSPVDANAHYSTALELARLTAD-YFWYAGALE 260 (1196)
Q Consensus 220 KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D-~LWlAsALE 260 (1196)
..+|..+...|+|.+|+..|..|+.+-....+ |+.+|.++.
T Consensus 59 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 100 (148)
T 2vgx_A 59 LGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLL 100 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 35788888888999999999888876543322 333444443
No 224
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=21.65 E-value=1.8e+02 Score=27.33 Aligned_cols=91 Identities=14% Similarity=-0.025 Sum_probs=56.1
Q ss_pred ehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHHHHHHhhhccC-CCchhhHHHHHHHHHHHHHHHhhcCCCC
Q 045708 222 IGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGSVCALLVDRMG-QKDAVLEEEVKFRYNSVILHYRKSFIPD 300 (1196)
Q Consensus 222 lGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi~~~llL~~~~-~~~~~~~~ei~~~~~~ai~lY~ks~~p~ 300 (1196)
+|.+|..-+.+..|+++|..|++. +| +.|+=.+.. +...-.+ ..| +.+|+..|+|+....
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~----g~----~~a~~~Lg~-~y~~G~g~~~d----------~~~A~~~~~~Aa~~g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL----NS----GNGCRFLGD-FYENGKYVKKD----------LRKAAQYYSKACGLN 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT----TC----HHHHHHHHH-HHHHCSSSCCC----------HHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC----CC----HHHHHHHHH-HHHcCCCCCcc----------HHHHHHHHHHHHcCC
Confidence 999999999999999999999874 22 112211111 1111111 122 677888888875211
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhh----ccchHHHHHHHHhhccC
Q 045708 301 NAQRVSPLSFELEATLKLARFLCR----RELAKDVVELLTSAADG 341 (1196)
Q Consensus 301 n~e~~p~l~~~~Ea~Lr~a~~L~~----~~~~~ei~~~L~~a~~~ 341 (1196)
..+++..++.++.. .....++.+++.++...
T Consensus 92 ----------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 92 ----------DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp ----------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ----------CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 14788888887765 44456677777776543
No 225
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=21.34 E-value=1.3e+02 Score=28.74 Aligned_cols=78 Identities=13% Similarity=0.053 Sum_probs=0.0
Q ss_pred cceeecceeeEEEEecCchhcccceeeeeeccCCCccccCCCCCcEEecccccccccccCCCCceeEEEEEEEEecceEE
Q 045708 1075 SVLAHDMTPMEVLVRNNTKEMIKMSLSITCRDVAGENCIEGTKPTVLWSGVLNEITMEVPPLQESKHCFSLYFLVPGEYT 1154 (1196)
Q Consensus 1075 ~~~~~~~~~~~v~v~n~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 1154 (1196)
++.-.|-+.|.+.|.|..++.++..+.+.-.+.- ..+-+... +.-|.+.+...+.+-+..| |+-+
T Consensus 17 sv~rgE~~~~~~~V~nyl~~~~~v~v~L~~s~~~-~~~~~~~~------------t~Clc~~~~~t~~W~i~~l--g~vn 81 (118)
T 3es6_B 17 SVRPNDEVTAVLAVQTELKECMVVKTYLISSIPL-QGAFNYKY------------TACLCDDNPKTFYWDFYTN--RTVQ 81 (118)
T ss_dssp EECSSCCEEEEEEEEECCSSCEEEEEEEEESSCC-CSGGGCEE------------EEEECSSSCEEEEEEECCS--SCEE
T ss_pred eEecCCEEEEEEEEEecccceEEEEEEecCCcCE-EccCCCcc------------cEEecCCCceEEEEEEEeC--CeEE
Q ss_pred EEEEEEeecchhH
Q 045708 1155 LVAAAVIDDANNI 1167 (1196)
Q Consensus 1155 ~~~~~~~~~~~~~ 1167 (1196)
++++|......|+
T Consensus 82 iTvsAea~~~~d~ 94 (118)
T 3es6_B 82 IAAVVDVIRELGI 94 (118)
T ss_dssp EEEEEEECCCSSS
T ss_pred EEEEEEEecCcCc
No 226
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=21.04 E-value=1.4e+02 Score=34.20 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=37.7
Q ss_pred ceeecceeeEEEEecCchhcccc-eeee--eeccCCCccccCCCCCcEEecccccccccccCCCCceeEEEEEE
Q 045708 1076 VLAHDMTPMEVLVRNNTKEMIKM-SLSI--TCRDVAGENCIEGTKPTVLWSGVLNEITMEVPPLQESKHCFSLY 1146 (1196)
Q Consensus 1076 ~~~~~~~~~~v~v~n~t~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 1146 (1196)
.+--|-+++.|.|.|+++..++- .+++ .| +.|+-.+. +.-=.-.......+|.|+++-..+|.++
T Consensus 224 Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~-----~v~l~s~~-~y~~~Va~~E~~epV~pgst~~k~~~l~ 291 (380)
T 3ugu_A 224 YYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVT-----NVVLYSSD-YYIKTVAAEEAQEKVPPNSSLTKTLTLV 291 (380)
T ss_dssp EETTCCEEEEEEEEECSSSCEEEEEEEEEEEE-----EECSSSCC-EEEEEEEEEECSCCBCTTEEEEEEEEEC
T ss_pred CcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEE-----EEEEecCC-eEEEEEEEeccCCcCCCCCeEEeeEEEE
Confidence 67779999999999999999753 4443 33 34432111 1111001111123788888766666644
No 227
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=20.85 E-value=54 Score=29.47 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=17.5
Q ss_pred hhcCChHHHHHHHHHHHHHhc
Q 045708 227 LLAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 227 LLaG~~~DAL~~Y~eAi~~lk 247 (1196)
=.+|+|.+|+..|.+|++.+-
T Consensus 30 D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHH
Confidence 457999999999999997543
No 228
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=20.49 E-value=1e+02 Score=29.40 Aligned_cols=43 Identities=9% Similarity=-0.149 Sum_probs=25.0
Q ss_pred ceeeehhHhhhcCChHHHHHHHHHHHHHhccC-CchhhHHHhHH
Q 045708 218 AQKTIGDYCLLAGSPVDANAHYSTALELARLT-ADYFWYAGALE 260 (1196)
Q Consensus 218 ~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~-~D~LWlAsALE 260 (1196)
....+|..++..|+|.+|+..|..|+.+-... .-|..+|.++.
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34456777777777777777777777654332 22333444443
No 229
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.08 E-value=57 Score=29.33 Aligned_cols=46 Identities=11% Similarity=-0.032 Sum_probs=35.8
Q ss_pred ccccceeeehhHhhhcCChHHHHHHHHHHHHHhccCCchhhHHHhHHHH
Q 045708 214 RLARAQKTIGDYCLLAGSPVDANAHYSTALELARLTADYFWYAGALEGS 262 (1196)
Q Consensus 214 ~~GR~~KvlGDl~LLaG~~~DAL~~Y~eAi~~lk~~~D~LWlAsALEGi 262 (1196)
...|-...+|+.++..|+|.+|+..|...++ ...+..|...-.+.|
T Consensus 41 ~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~---~~p~~~~~~~i~~~I 86 (93)
T 3bee_A 41 YNEAALSLIANDHFISFRFQEAIDTWVLLLD---SNDPNLDRVTIIESI 86 (93)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT---CCCTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCCCCccHHHHHHHH
Confidence 5567888999999999999999999999765 344456765555554
No 230
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=20.04 E-value=58 Score=29.20 Aligned_cols=20 Identities=30% Similarity=0.348 Sum_probs=16.8
Q ss_pred hcCChHHHHHHHHHHHHHhc
Q 045708 228 LAGSPVDANAHYSTALELAR 247 (1196)
Q Consensus 228 LaG~~~DAL~~Y~eAi~~lk 247 (1196)
.+|+|..|+..|.+|++.+-
T Consensus 23 ~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 23 KEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHH
Confidence 57999999999999996543
Done!