Citrus Sinensis ID: 045713

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
Protein Sequence
NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Secondary Structure (PSIPRED)
ccccccEEEcccccEEEEEEcccccEEEEEEEEccccEEEEEEEEcccccccccccccccccccccccccEEEEEcccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHEEEEEEcHHHHHcccccccccccEEcHHHHHHHHHcHHHHcccccccEEEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccEEcccccEEEEEEEccccEEEEEEEccccEEEEEEEcccccccccccEEEEEEccHHHHcccEEEEEEcccccEccEEEEEEEEEccccccccccHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccEEEEcEccccccEEEEEEEccccHccHHHHHHHHHHHHHcccHHHHHHHHHHcccccEEEEEEccccc
Coil and Loop (DISEMBL)
ndsapaayfsdegsnisldlqsgnpmqiWIDYNGEEKLLNVtlapirvskpnrpllstplDLSQILLDTmhvgfsastgiltsnqyilgwsfsrigeaqnldisklpilppppsltpsasfspfapppekakekgrgpiiiVFPIVAVFAVALITISGAIYIVQKKKYEELYEDweseygpqrfsyKDLYKATKGFKEligkggfgkvykgvlstsglpiaVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Flexible Loop (DISEMBL)
NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Low Complexity Region (SEG)
NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDisklpilppppsltpsasfspfapppekakeKGRGpiiivfpivavfavaLITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIgkggfgkvykgvLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Disordered region (IsUnstruct)
***********************NPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKL*******************************PIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM***
Disordered Region (DISOPRED)
**SAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKL**************************EKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKK***********YGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD****MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Disordered Region (DISEMBL)
**********DEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFSP**********KGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Disordered Region (DISPRO)
****PAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSL******************KGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	274	2.2.26 [Sep-21-2011]
Q9FIF1	674	Probable L-type lectin-do	yes	no	0.908	0.369	0.513	2e-72
Q9M3D7	667	Putative L-type lectin-do	no	no	0.941	0.386	0.557	5e-72
Q9FIF0	694	Putative L-type lectin-do	no	no	0.985	0.389	0.515	6e-68
Q9M3D8	664	L-type lectin-domain cont	no	no	0.912	0.376	0.510	6e-68
Q9SZD5	669	L-type lectin-domain cont	no	no	0.916	0.375	0.479	4e-65
Q9M3E5	682	Putative L-type lectin-do	no	no	0.901	0.362	0.509	2e-64
Q9LSR8	766	L-type lectin-domain cont	no	no	0.905	0.323	0.478	3e-64
O04533	656	Putative L-type lectin-do	no	no	0.912	0.381	0.448	5e-64
Q9FJI4	675	Putative L-type lectin-do	no	no	0.912	0.370	0.505	2e-63
Q9M345	677	L-type lectin-domain cont	no	no	0.916	0.370	0.479	1e-62

>sp|Q9FIF1|LRK21_ARATH Probable L-type lectin-domain containing receptor kinase II.1 OS=Arabidopsis thaliana GN=LECRK21 PE=2 SV=1

 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/286 (51%), Positives = 192/286 (67%), Gaps = 37/286 (12%)

Query: 2   DSAPAAYF-SDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRP------ 54
           +SA A+YF + +G NISL L SG  + +WIDY+G EK+LNVTLAP++  KP+ P      
Sbjct: 171 ESADASYFNARKGKNISLPLASGKSILVWIDYDGIEKVLNVTLAPVQTPKPDSPYFSSFI 230

Query: 55  -----LLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPIL 109
                LLS  ++LS+I  +TM+VGFS STG + SNQYILGWSF + G+A++LDIS+L   
Sbjct: 231 KPKVPLLSRSINLSEIFTETMYVGFSGSTGSIKSNQYILGWSFKQGGKAESLDISRLSNP 290

Query: 110 PPPPSLTPSASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYE 169
           PP P                      R P+  V     +  +A +T+ G +Y+ +KKKY 
Sbjct: 291 PPSPK---------------------RFPLKEVLG-ATISTIAFLTLGGIVYLYKKKKYA 328

Query: 170 ELYEDWESEYGPQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISH 227
           E+ E WE EY PQR+S++ LYKATKGF+E  L+G GGFGKVYKG+L  SG  IAVK++ H
Sbjct: 329 EVLEQWEKEYSPQRYSFRILYKATKGFRENQLLGAGGFGKVYKGILP-SGTQIAVKRVYH 387

Query: 228 DSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           D+EQ MK++V+EI SMG LRH+NLV L GYCRRK ELLLVY+YM N
Sbjct: 388 DAEQGMKQYVAEIASMGRLRHKNLVHLLGYCRRKGELLLVYDYMPN 433

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9M3D7|LRK14_ARATH Putative L-type lectin-domain containing receptor kinase I.4 OS=Arabidopsis thaliana GN=LECRK14 PE=3 SV=1

 Score =  271 bits (692), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 154/276 (55%), Positives = 194/276 (70%), Gaps = 18/276 (6%)

Query: 2   DSAPAAYFSDE-GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           +SA  +YFSD  G NIS++L SG P+Q+WIDY+G   LLNVTLAPI + KPNRPL+S  +
Sbjct: 167 ESALPSYFSDALGKNISINLVSGEPVQVWIDYDG--SLLNVTLAPIEIQKPNRPLISRDI 224

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGE-AQNLDISKLPILPPPPSLTPSA 119
           +LS+I  D M++GFS S G LTSNQYILGWSFS+  E  Q+LD+SKLP  P P +     
Sbjct: 225 NLSEIFQDKMYIGFSGSNGRLTSNQYILGWSFSKSKEFMQSLDLSKLPQAPIPRNEQ--- 281

Query: 120 SFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEY 179
                AP P + K+K   P++I   I+ V  V ++   G +Y  ++KKY E+ E WE EY
Sbjct: 282 -----APVPREEKKKLH-PLLIGLVILLVIPVLMVL--GGVYWYRRKKYAEVKESWEKEY 333

Query: 180 GPQRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV 237
           GP R+SYK LYKAT GF    L+GKGGFGKVYKG L   G  IAVK++SHD+EQ MK+FV
Sbjct: 334 GPHRYSYKSLYKATNGFVKDALVGKGGFGKVYKGTL-PGGRHIAVKRLSHDAEQGMKQFV 392

Query: 238 SEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +E+V+MG ++HRNLV L GYCRRK ELLLV  YM N
Sbjct: 393 AEVVTMGNIQHRNLVPLLGYCRRKGELLLVSEYMSN 428

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIF0|LRK22_ARATH Putative L-type lectin-domain containing receptor kinase II.2 OS=Arabidopsis thaliana GN=LECRK22 PE=3 SV=3

 Score =  257 bits (657), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 148/287 (51%), Positives = 192/287 (66%), Gaps = 17/287 (5%)

Query: 2   DSAPAAYFS-DEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPI-----------RVS 49
           DSA A+YFS  EG NIS  L S   + +WIDYNG EKLLNVT+AP+              
Sbjct: 169 DSANASYFSGTEGKNISFRLASEKSILVWIDYNGTEKLLNVTVAPVPTPKPALPYLSSSI 228

Query: 50  KPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISK-LPI 108
           KP +PLLS  +++S+I   TM VGFS STG + S+QYILGWSF + G+A++LD+SK L  
Sbjct: 229 KPRKPLLSRFINISEIFNGTMFVGFSGSTGTVKSDQYILGWSFKKGGQAESLDLSKILDP 288

Query: 109 LPPPPSLTPSASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKY 168
              PP  +      P  P P  ++ K    III+   V   A  L+ + G +Y+ +KKKY
Sbjct: 289 PNRPPPPSSPPPPPPPPPTPPTSRSKDSKNIIIICVTVTSIAF-LLMLGGFLYLYKKKKY 347

Query: 169 EELYEDWESEYGPQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKIS 226
            E+ E WE+EY PQR+S+++LYKA +GF+E  L+G GGFGKVYKG L  SG  IAVK++ 
Sbjct: 348 AEVLEHWENEYSPQRYSFRNLYKAIRGFRENRLLGAGGFGKVYKGELP-SGTQIAVKRVY 406

Query: 227 HDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           H++EQ MK++ +EI SMG LRH+NLVQL GYCRRK ELLLVY+YM N
Sbjct: 407 HNAEQGMKQYAAEIASMGRLRHKNLVQLLGYCRRKGELLLVYDYMPN 453

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M3D8|LRK13_ARATH L-type lectin-domain containing receptor kinase I.3 OS=Arabidopsis thaliana GN=LECRK13 PE=1 SV=1

 Score =  257 bits (657), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 141/276 (51%), Positives = 183/276 (66%), Gaps = 26/276 (9%)

Query: 2   DSAPAAYFSDE-GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           +SA  +YFS+  G NIS++L SG P+Q+W+DY+G    LNVTLAPI + KPN+PL+S  +
Sbjct: 167 ESALPSYFSNALGKNISINLLSGEPIQVWVDYDGS--FLNVTLAPIEIKKPNQPLISRAI 224

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEA-QNLDISKLPILPPPPSLTPSA 119
           +LS+I  + M+VGFS+STG L SN YILGWSFSR  E  Q+L++S LP +P      P  
Sbjct: 225 NLSEIFQEKMYVGFSSSTGNLLSNHYILGWSFSRRKEQLQSLNLSTLPRVP-----LPKE 279

Query: 120 SFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEY 179
                +P           P+++V               G +Y  ++KKY E+ E WE EY
Sbjct: 280 EKKKLSPLLIGLVILLVIPVVMVL--------------GGVYWYRRKKYAEVKEWWEKEY 325

Query: 180 GPQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV 237
           GP RFSYK LYKAT GF++   +GKGGFG+VYKG L   G  IAVK++SHD+EQ MK+FV
Sbjct: 326 GPHRFSYKSLYKATNGFRKDCRVGKGGFGEVYKGTLP-GGRHIAVKRLSHDAEQGMKQFV 384

Query: 238 SEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +E+V+MG L+HRNLV L GYCRRK ELLLV  YM N
Sbjct: 385 AEVVTMGNLQHRNLVPLLGYCRRKCELLLVSEYMPN 420

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1

 Score =  248 bits (632), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 175/271 (64%), Gaps = 20/271 (7%)

Query: 3   SAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDL 62
           S    Y  D+G+  ++ L +  P+Q WI+Y+   + LNVT+ PI + KP  PLLS   DL
Sbjct: 169 STAGYYEDDDGTFKNIRLINQKPIQAWIEYDSSRRQLNVTIHPIHLPKPKIPLLSLTKDL 228

Query: 63  SQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFS 122
           S  L D+M+VGF+++TG L S+ YILGW+F   G A N+DIS+LP LP     T      
Sbjct: 229 SPYLFDSMYVGFTSATGRLRSSHYILGWTFKLNGTASNIDISRLPKLPRDSRSTSVKKI- 287

Query: 123 PFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQ 182
                           + I   + ++  +  +TIS  +++ ++KK  E+ EDWE ++GP 
Sbjct: 288 ----------------LAISLSLTSLAILVFLTISYMLFL-KRKKLMEVLEDWEVQFGPH 330

Query: 183 RFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEI 240
           RF+YKDLY ATKGF+  EL+GKGGFGKVYKG LSTS + IAVKK+SHDS Q M+EFV+EI
Sbjct: 331 RFAYKDLYIATKGFRNSELLGKGGFGKVYKGTLSTSNMDIAVKKVSHDSRQGMREFVAEI 390

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
            ++G LRH NLV+L GYCRRK EL LVY+ M
Sbjct: 391 ATIGRLRHPNLVRLLGYCRRKGELYLVYDCM 421

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M3E5|LRK11_ARATH Putative L-type lectin-domain containing receptor kinase I.1 OS=Arabidopsis thaliana GN=LECRK11 PE=3 SV=1

 Score =  246 bits (627), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/275 (50%), Positives = 186/275 (67%), Gaps = 28/275 (10%)

Query: 2   DSAPAAYFSD-EGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           +SA A+Y+SD EG N SL L SG+P+Q+WIDY  E+ LLNVTLAP++  KP++PLLS  +
Sbjct: 173 ESASASYYSDKEGKNKSLKLLSGDPIQVWIDY--EDTLLNVTLAPLKTQKPSKPLLSITI 230

Query: 61  DLSQILLD-TMHVGFSASTGILTSNQYILGWSFSR-IGEAQNLDISKLPILPPPPSLTPS 118
           +L+ I  D    +GFSA+TG L S QYILGWSFSR     Q+LDISKLP +P P      
Sbjct: 231 NLTAIFPDRKAFIGFSAATGSLISYQYILGWSFSRNRALLQSLDISKLPTVPRPKK---- 286

Query: 119 ASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESE 178
                    PEK           +  ++ + A+ ++ + G  Y+ ++KKY E+ E WE  
Sbjct: 287 ---------PEKTSPL-------LIVLLIILAIIVMVVVGGFYLYRRKKYAEVREPWEKP 330

Query: 179 YGPQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEF 236
           YGP R+SYK LYKAT+GF +   +G+GGFG+VYKG L   G  IAVK++SHD+EQ MK+F
Sbjct: 331 YGPLRYSYKSLYKATRGFNKDGRLGRGGFGEVYKGTLPILG-DIAVKRLSHDAEQGMKQF 389

Query: 237 VSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           V+E+V+MG+L+H+NLV L GYCRRK ELLLV  YM
Sbjct: 390 VAEVVTMGSLQHKNLVPLLGYCRRKGELLLVSKYM 424

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LSR8|LRK19_ARATH L-type lectin-domain containing receptor kinase I.9 OS=Arabidopsis thaliana GN=LECRK19 PE=1 SV=2

 Score =  245 bits (625), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/276 (47%), Positives = 184/276 (66%), Gaps = 28/276 (10%)

Query: 4   APAAYFSD-EGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDL 62
           A A+Y+SD +GSN S++L SGNP+Q+W+DY G   LLNV++AP+ V KP RPLLS P++L
Sbjct: 169 ASASYYSDMKGSNESINLLSGNPIQVWVDYEG--TLLNVSVAPLEVQKPTRPLLSHPINL 226

Query: 63  SQILLD--TMHVGFSASTGILTSNQYILGWSFS-RIGEAQNLDISKLPILPPPPSLTPSA 119
           +++  +  ++  GFSA+TG   S+QYIL WSFS   G  Q LDISKLP +P P       
Sbjct: 227 TELFPNRSSLFAGFSAATGTAISDQYILWWSFSIDRGSLQRLDISKLPEVPHP------- 279

Query: 120 SFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEY 179
                     +A  K    +II+ P+    A+ ++ +   +Y  +++KY E+ E WE E+
Sbjct: 280 ----------RAPHKKVSTLIILLPVC--LAILVLAVLAGLYFRRRRKYSEVSETWEKEF 327

Query: 180 GPQRFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV 237
              RFSY+ L+KATKGF   E +GKGGFG+VY+G L   G  IAVK++SH+ ++ +K+FV
Sbjct: 328 DAHRFSYRSLFKATKGFSKDEFLGKGGFGEVYRGNLP-QGREIAVKRVSHNGDEGVKQFV 386

Query: 238 SEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +E+VSM  L+HRNLV L GYCRRK+ELLLV  YM N
Sbjct: 387 AEVVSMRCLKHRNLVPLFGYCRRKRELLLVSEYMPN 422

May be involved in protein-protein interactions with RGD motif-containing proteins as potential ligands. Plays probably a structural and signaling role at the plant cell surfaces.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O04533|LRK52_ARATH Putative L-type lectin-domain containing receptor kinase V.2 OS=Arabidopsis thaliana GN=LECRK52 PE=3 SV=1

 Score =  244 bits (623), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 122/272 (44%), Positives = 183/272 (67%), Gaps = 22/272 (8%)

Query: 3   SAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDL 62
           +  A Y+ D+G  ++LD+ SG P+Q+WI+YN   K L+VT+  I++SKP  PLLS   DL
Sbjct: 159 NCSAGYYKDDGRLVNLDIASGKPIQVWIEYNNSTKQLDVTMHSIKISKPKIPLLSMRKDL 218

Query: 63  SQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFS 122
           S  L + M++GF+ S G  TS+ YILGWSF+  G   ++++S+LP +P            
Sbjct: 219 SPYLHEYMYIGFT-SVGSPTSSHYILGWSFNNKGAVSDINLSRLPKVP------------ 265

Query: 123 PFAPPPEKAKEKGRGPIIIVFPI-VAVFAVALITISGAIYIVQKKKYEELYEDWESEYGP 181
                 ++ +E+     I+   + ++   + ++ I G +  +++KK+ E+ EDWE ++GP
Sbjct: 266 ------DEDQERSLSSKILAISLSISGVTLVIVLILGVMLFLKRKKFLEVIEDWEVQFGP 319

Query: 182 QRFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSE 239
            +F+YKDL+ ATKGFK  E++GKGGFGKV+KG+L  S +PIAVKKISHDS Q M+EF++E
Sbjct: 320 HKFTYKDLFIATKGFKNSEVLGKGGFGKVFKGILPLSSIPIAVKKISHDSRQGMREFLAE 379

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           I ++G LRH +LV+L GYCRRK EL LVY++M
Sbjct: 380 IATIGRLRHPDLVRLLGYCRRKGELYLVYDFM 411

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FJI4|LK111_ARATH Putative L-type lectin-domain containing receptor kinase I.11 OS=Arabidopsis thaliana GN=LECRK111 PE=3 SV=1

 Score =  242 bits (618), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/277 (50%), Positives = 187/277 (67%), Gaps = 27/277 (9%)

Query: 2   DSAPAAYFSD-EGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           +SA A+YFS+ +G N S+ L SG+P+QIW+DY G   LLNVT+AP+ + KPN PLLS  +
Sbjct: 172 ESASASYFSNAKGKNQSIKLLSGDPIQIWVDYEG--ALLNVTVAPLSIQKPNHPLLSRSI 229

Query: 61  DLSQILLD-TMHVGFSASTGILTSNQYILGWSFSRIGEA-QNLDISKLPILPPPPSLTPS 118
           +L+ I  D  +  GFSA+TG L S QYILGWSFSR     Q+LD SKLP +P P      
Sbjct: 230 NLTDIFPDRKLFFGFSAATGTLVSYQYILGWSFSRSRMLLQSLDFSKLPQIPHP------ 283

Query: 119 ASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESE 178
                      KAK++   P++IV  ++ +  + ++ + G IY+ ++KKY E+ E WE E
Sbjct: 284 -----------KAKQEQTSPLLIV--LLMLLVLIMLAVLGGIYLYRRKKYAEVREVWEKE 330

Query: 179 YGPQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEF 236
           Y P RFSYK LYKAT  F +   +GKGGFG+VY+G L   G  IAVK++ HD++Q MK+F
Sbjct: 331 YSPHRFSYKSLYKATNRFDKDGRLGKGGFGEVYRGNLPHVG-DIAVKRVCHDAKQGMKQF 389

Query: 237 VSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           V+E+V+MG+L+HRNLV L GYCRRK ELLLV  YM N
Sbjct: 390 VAEVVTMGSLKHRNLVPLLGYCRRKGELLLVSEYMSN 426

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1

 Score =  239 bits (611), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/273 (47%), Positives = 176/273 (64%), Gaps = 22/273 (8%)

Query: 4   APAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLS 63
           + A Y  D     +L L S   +Q+WIDY+     ++VT+AP    KP +PL+S   DLS
Sbjct: 173 STAGYRDDHDKFQNLSLISRKRIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLS 232

Query: 64  QILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFSP 123
            ILL+ M+VGFS++TG + S  +++GWSF   GEA  L +SKLP LP             
Sbjct: 233 SILLEDMYVGFSSATGSVLSEHFLVGWSFRLNGEAPMLSLSKLPKLPR------------ 280

Query: 124 FAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQ-KKKYEELYEDWESEYGPQ 182
           F P       K   P+I    +  +F++  +    A YIV+ KKKYEE  +DWE+E+G  
Sbjct: 281 FEPRRISEFYKIGMPLI---SLSLIFSIIFL----AFYIVRRKKKYEEELDDWETEFGKN 333

Query: 183 RFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEI 240
           RF +K+LY ATKGFKE  L+G GGFG+VY+G+L T+ L +AVK++SHDS+Q MKEFV+EI
Sbjct: 334 RFRFKELYHATKGFKEKDLLGSGGFGRVYRGILPTTKLEVAVKRVSHDSKQGMKEFVAEI 393

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           VS+G + HRNLV L GYCRR+ ELLLVY+YM N
Sbjct: 394 VSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPN 426

Required during pollen development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
224106419	607	predicted protein [Populus trichocarpa]	0.923	0.416	0.596	1e-86
224106407	675	predicted protein [Populus trichocarpa]	0.923	0.374	0.592	2e-85
255559006	667	kinase, putative [Ricinus communis] gi|2	0.916	0.376	0.609	9e-85
255559000	670	kinase, putative [Ricinus communis] gi|2	0.919	0.376	0.610	1e-82
255558978	662	kinase, putative [Ricinus communis] gi|2	0.930	0.385	0.572	4e-81
255559002	667	BRASSINOSTEROID INSENSITIVE 1-associated	0.992	0.407	0.610	4e-80
224059452	599	predicted protein [Populus trichocarpa]	0.916	0.419	0.582	5e-79
225434861	675	PREDICTED: L-type lectin-domain containi	0.919	0.373	0.580	4e-78
224106425	674	predicted protein [Populus trichocarpa]	0.916	0.372	0.580	5e-77
38112425	659	lectin-like receptor kinase 7;1 [Medicag	0.916	0.380	0.545	1e-75

>gi|224106419|ref|XP_002314159.1| predicted protein [Populus trichocarpa] gi|222850567|gb|EEE88114.1| predicted protein [Populus trichocarpa]

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 164/275 (59%), Positives = 202/275 (73%), Gaps = 22/275 (8%)

Query: 2   DSAPAAYFSDE-GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           +SAP  YFSDE   N SL L SG+ M +WIDY+  E LLNVT+AP+  +KP  PLLSTPL
Sbjct: 152 ESAPVTYFSDEEKENKSLTLISGHAMHVWIDYDEVEMLLNVTVAPVTRTKPTLPLLSTPL 211

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSAS 120
           DLS ++L++M+VGFS+STG + SN YILGWSF+R G+AQ+LD+SKLP LP          
Sbjct: 212 DLSSVMLNSMYVGFSSSTGAMASNNYILGWSFNRGGQAQSLDVSKLPTLPT--------- 262

Query: 121 FSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYG 180
                    + K + +  + IV P +    + L+ ISG ++I+++KKYEEL EDWE EYG
Sbjct: 263 ---------RRKSRKKPQLRIVVPTITAI-ILLVAISGDVFIIRRKKYEELREDWEQEYG 312

Query: 181 PQRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS 238
           PQR SYKDLYKATKGF  KEL+G GGFGKVY+GVL +S + +AVKK+SHDS Q  KEFV+
Sbjct: 313 PQRISYKDLYKATKGFTDKELLGCGGFGKVYRGVLPSSNMQVAVKKVSHDSRQGTKEFVA 372

Query: 239 EIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           EIVSMG LRHRNLVQL GYCRRK ELLLVY+YM N
Sbjct: 373 EIVSMGRLRHRNLVQLFGYCRRKGELLLVYDYMPN 407

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106407|ref|XP_002314156.1| predicted protein [Populus trichocarpa] gi|222850564|gb|EEE88111.1| predicted protein [Populus trichocarpa]

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 163/275 (59%), Positives = 203/275 (73%), Gaps = 22/275 (8%)

Query: 2   DSAPAAYFSDE-GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           +SAP  YFSDE   N SL L SG+ M +WIDY+  EKLLNVT+API  +KP  PLLS PL
Sbjct: 174 ESAPVTYFSDEENENKSLTLISGHVMHVWIDYDEVEKLLNVTVAPITRTKPTLPLLSKPL 233

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSAS 120
           DLS ++LD+M+VGFSASTG + S+ YILGWSF+R G+AQ+LD+SKLP LPP         
Sbjct: 234 DLSSVMLDSMYVGFSASTGAVASSHYILGWSFNRGGQAQSLDVSKLPSLPP--------- 284

Query: 121 FSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYG 180
                    + K + +  +II+ P +    + L+ ISGA  I+++KKYEEL EDWE EYG
Sbjct: 285 ---------QRKSRKKPYLIILVPTITAI-ILLVAISGAASIIRRKKYEELREDWEQEYG 334

Query: 181 PQRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS 238
           PQRFSYKDLYKAT GF  ++L+G GGFGKVY+GVL +S + +A+KK+SHDS+Q  K+FV+
Sbjct: 335 PQRFSYKDLYKATTGFTDRKLLGSGGFGKVYRGVLPSSNMQVAIKKVSHDSKQGTKQFVA 394

Query: 239 EIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           EI SMG LRHRNLVQL GYCRRK ELLLVY+YM N
Sbjct: 395 EIASMGRLRHRNLVQLLGYCRRKGELLLVYDYMPN 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559006|ref|XP_002520526.1| kinase, putative [Ricinus communis] gi|223540368|gb|EEF41939.1| kinase, putative [Ricinus communis]

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 167/274 (60%), Positives = 205/274 (74%), Gaps = 23/274 (8%)

Query: 3   SAPAAYFSD-EGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLD 61
           S  A+YFS+ E  N SL+L SG PMQ+WIDY+  EKLLNVTLAPI   KP +PLLST +D
Sbjct: 177 SVSASYFSETEEKNKSLELTSGRPMQMWIDYDEMEKLLNVTLAPIERMKPEKPLLSTNID 236

Query: 62  LSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASF 121
           LS +LL++M+VGFSASTG ++SN YILGWSF+R G+AQ+LD SKLP L            
Sbjct: 237 LSALLLESMYVGFSASTGSVSSNHYILGWSFNRSGQAQSLDPSKLPSL------------ 284

Query: 122 SPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGP 181
                 P++ K +G+  + I+ P+V V  V L+TIS  IYI+ +K+YEE+ EDWE +YGP
Sbjct: 285 ------PQERKSRGKLAMKIMLPLVIVI-VLLMTISATIYIM-RKRYEEIREDWEQQYGP 336

Query: 182 QRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSE 239
           QRFSYKDLYKATKGF  KEL+G GGFGKVY+G L +S + +AVKK+SHDS Q MKEFV+E
Sbjct: 337 QRFSYKDLYKATKGFKDKELLGCGGFGKVYRGTLPSSNVEVAVKKVSHDSRQGMKEFVAE 396

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           I SMG LRHRNLVQL GYCRRK EL LVY++M N
Sbjct: 397 IASMGRLRHRNLVQLLGYCRRKGELFLVYDHMPN 430

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559000|ref|XP_002520523.1| kinase, putative [Ricinus communis] gi|223540365|gb|EEF41936.1| kinase, putative [Ricinus communis]

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/275 (61%), Positives = 202/275 (73%), Gaps = 23/275 (8%)

Query: 1   NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           N SA A YFSD   N SL+L S +PMQ+WIDY+  EKLLNVTLAPI   KP +PLLST +
Sbjct: 173 NASASATYFSDN-QNKSLELISRSPMQVWIDYDAVEKLLNVTLAPITSKKPEKPLLSTTI 231

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSAS 120
           DLS +LLD+M+VGFS+STG + S  YILGWSF+R G AQ+LD+SKLP LPP P      +
Sbjct: 232 DLSIVLLDSMYVGFSSSTGSMASYHYILGWSFNRSGPAQSLDMSKLPSLPPKPKSGKKPN 291

Query: 121 FSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYG 180
                               I+ P++   ++ LITI GA+YI ++KKYEEL+EDWE EYG
Sbjct: 292 LR------------------IMIPLITA-SIVLITIFGAVYI-KRKKYEELHEDWEQEYG 331

Query: 181 PQRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS 238
           PQRFSY+DLY+ATKGF  KEL+G GGFGKVYKGVL +S   +AVK+ SH S+Q MKEFV+
Sbjct: 332 PQRFSYRDLYRATKGFQDKELLGSGGFGKVYKGVLPSSNTQVAVKQFSHGSQQGMKEFVA 391

Query: 239 EIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           EI SMG LRHRNLVQL GYCRRK+ELLLVY+YM N
Sbjct: 392 EIASMGRLRHRNLVQLLGYCRRKRELLLVYDYMPN 426

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558978|ref|XP_002520512.1| kinase, putative [Ricinus communis] gi|223540354|gb|EEF41925.1| kinase, putative [Ricinus communis]

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 158/276 (57%), Positives = 200/276 (72%), Gaps = 21/276 (7%)

Query: 1   NDSAPAAYFSD-EGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTP 59
           N+SAP  Y+ D EG N +L+L SG+PMQ+WIDY  EEKLLNVT+API VSKP+RPLLS  
Sbjct: 170 NESAPVTYYLDKEGRNQTLELNSGDPMQVWIDYKEEEKLLNVTVAPIGVSKPSRPLLSKS 229

Query: 60  LDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSA 119
           L+LSQ+LL++M+VGFSA+TG ++S  YILGWSF++ GE+Q LD SKLP L   PSL  S 
Sbjct: 230 LNLSQVLLESMYVGFSAATGSVSSRHYILGWSFNKSGESQTLDPSKLPSL---PSLAKS- 285

Query: 120 SFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEY 179
                         K    +II+  +     + +  + G ++I ++K+YEE+ EDWE  Y
Sbjct: 286 -------------RKLNLRLIILLAVTLTVTIIVTAVLGTMFI-RRKRYEEIREDWEKAY 331

Query: 180 GPQRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV 237
           GPQRFSY+ LYKAT+ F  K+L+G GGFGKVY+G+LS+    +AVKKISH+S Q MKEF+
Sbjct: 332 GPQRFSYEVLYKATRDFRDKDLLGAGGFGKVYRGILSSCNTQVAVKKISHNSAQGMKEFI 391

Query: 238 SEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +EI SMG LRHRNLVQL GYCRRK ELLLVY YM N
Sbjct: 392 AEIASMGRLRHRNLVQLLGYCRRKGELLLVYEYMPN 427

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559002|ref|XP_002520524.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223540366|gb|EEF41937.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 168/275 (61%), Positives = 200/275 (72%), Gaps = 3/275 (1%)

Query: 1   NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           N SAPAAYFSD+    +L L SG PMQ+WIDY+  + +LN+TLAPI V KP +PLLST +
Sbjct: 165 NVSAPAAYFSDKEYK-NLTLISGKPMQVWIDYDEVQMILNITLAPITVMKPEKPLLSTTI 223

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSAS 120
           DLS ILLD+M+VGFS+STG + S  YILGWSF++ G AQ+LD SKLP LP  P       
Sbjct: 224 DLSLILLDSMYVGFSSSTGSMASYHYILGWSFNKSGPAQSLDTSKLPSLPLAPPSPSLPV 283

Query: 121 FSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYG 180
             P  PP   A        +I+     V  V LI I G +YI+++KK+EEL EDWE EYG
Sbjct: 284 TPPAPPPSLPAPPSHPPKKLIITASSIVAGVVLIAIFGTLYILKRKKFEELREDWEKEYG 343

Query: 181 PQRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS 238
           PQRFSY+DLYKATK F  KEL+G GGFGKVY+GVL +S   +AVKK SHDS+Q MKEF++
Sbjct: 344 PQRFSYRDLYKATKAFKDKELLGFGGFGKVYRGVLPSSNTQVAVKKFSHDSQQGMKEFIA 403

Query: 239 EIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           EIVSMG LRHRNLVQL GYCRRK ELLLVY+YM N
Sbjct: 404 EIVSMGRLRHRNLVQLLGYCRRKGELLLVYDYMPN 438

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059452|ref|XP_002299853.1| predicted protein [Populus trichocarpa] gi|222847111|gb|EEE84658.1| predicted protein [Populus trichocarpa]

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 159/273 (58%), Positives = 198/273 (72%), Gaps = 22/273 (8%)

Query: 3   SAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDL 62
           SAPA+YFS+ G N  L L SG+PMQ+WIDY+  +KLL+VTLAP+ V+KP +PLLST +DL
Sbjct: 146 SAPASYFSEHGGNEILQLISGDPMQVWIDYDEMDKLLDVTLAPVSVTKPRKPLLSTTIDL 205

Query: 63  SQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASFS 122
           SQ+LLD+M+VGFS+STG ++S+ YILGWSF++ G+AQ+L  SKLP LPP           
Sbjct: 206 SQVLLDSMYVGFSSSTGSVSSHHYILGWSFNKSGQAQSLGTSKLPSLPP----------- 254

Query: 123 PFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGPQ 182
                  +     +  + IV P++ V    L+  S A   + + KYEE+ EDWE +YGPQ
Sbjct: 255 -------ERNSSNKPDLRIVIPLITV--SVLLIASFATMCIMRNKYEEVREDWEQQYGPQ 305

Query: 183 RFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEI 240
           RF YKDLYKATKGF  KEL+G GGFG+VY+G L +S + IAVKKISH S Q MKEFV+EI
Sbjct: 306 RFRYKDLYKATKGFKDKELLGTGGFGRVYRGELRSSKVEIAVKKISHGSNQGMKEFVAEI 365

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            SMG LRHRNLVQL GYCRRK ELLLVY+YM N
Sbjct: 366 ASMGRLRHRNLVQLLGYCRRKGELLLVYDYMPN 398

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434861|ref|XP_002280641.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2 [Vitis vinifera]

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 159/274 (58%), Positives = 205/274 (74%), Gaps = 22/274 (8%)

Query: 3   SAPAAYFSD-EGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLD 61
           SAP  YFS+ EG N SL+L SG  MQ+WIDY+  +KL+NVT+AP++  KP+ PLLSTP++
Sbjct: 174 SAPVTYFSNKEGKNKSLELISGKAMQVWIDYDDVQKLINVTVAPLKSPKPSMPLLSTPIN 233

Query: 62  LSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASF 121
           LS I L++M+VGFS++TG + S+ YILGWSF+R GEAQ+L+IS+LP LPP          
Sbjct: 234 LSSIFLESMYVGFSSATGAMASDHYILGWSFNRSGEAQSLEISELPSLPP---------- 283

Query: 122 SPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGP 181
                   + KE+ +  ++IV   +    + L+ + GA YI++K K+EEL E+WE EYGP
Sbjct: 284 --------RKKER-KTLVVIVLLSLTTLVIVLVVLMGAGYIIRKLKFEELREEWEGEYGP 334

Query: 182 QRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSE 239
           QRFSYKDLYKATKGF  KEL+G GGFGKVY+G L +S L IAVKK+SHDS+Q M+EFV+E
Sbjct: 335 QRFSYKDLYKATKGFKDKELLGAGGFGKVYRGRLPSSNLEIAVKKVSHDSKQGMREFVAE 394

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           I SMG LRHRNLVQL GYCRR+ ELLLVY++M N
Sbjct: 395 IASMGRLRHRNLVQLLGYCRRRGELLLVYDHMPN 428

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106425|ref|XP_002314160.1| predicted protein [Populus trichocarpa] gi|222850568|gb|EEE88115.1| predicted protein [Populus trichocarpa]

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 159/274 (58%), Positives = 204/274 (74%), Gaps = 23/274 (8%)

Query: 3   SAPAAYFS-DEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLD 61
           SAPA+YFS  E  N SL L SG+PMQ+WIDY+  E LLNVTLAP+ + KP +PLLSTP++
Sbjct: 175 SAPASYFSKHERENESLQLISGDPMQVWIDYDEMENLLNVTLAPVSIMKPQKPLLSTPIN 234

Query: 62  LSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPSASF 121
           LS ++L++M+VGFS+STG ++S+ YILGWSF++ G+AQ+LD SKLP LPP  + T     
Sbjct: 235 LSLVVLESMYVGFSSSTGSVSSHHYILGWSFNKSGQAQSLDTSKLPSLPPERNSTN---- 290

Query: 122 SPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESEYGP 181
            P+              + I+ P++ V +V LI     +YI+ +K+YEE++EDWE +YGP
Sbjct: 291 KPY--------------LRIMIPLITV-SVLLIASFATMYIM-RKRYEEVHEDWEQQYGP 334

Query: 182 QRFSYKDLYKATKGF--KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSE 239
           QRF YKDLYKATKGF  K L+G GGFG+VY+G L +S + IAVKKI+HDS Q MKEFV+E
Sbjct: 335 QRFRYKDLYKATKGFKVKGLLGYGGFGRVYRGELRSSKVEIAVKKITHDSNQGMKEFVAE 394

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           I +MG LRHRNLVQL GYCRRK ELLLVY+YM N
Sbjct: 395 IATMGRLRHRNLVQLLGYCRRKGELLLVYDYMPN 428

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38112425|gb|AAR11298.1| lectin-like receptor kinase 7;1 [Medicago truncatula]

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/277 (54%), Positives = 197/277 (71%), Gaps = 26/277 (9%)

Query: 2   DSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRV---SKPNRPLLST 58
           DS PA Y+   G    L L SG PMQ+WI+Y+G +K ++VTLAP+ V   +KP +PLLS 
Sbjct: 165 DSTPAGYYDGYGQFKDLSLSSGYPMQVWIEYDGVKKKIDVTLAPMSVGASNKPTQPLLSL 224

Query: 59  PLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPSLTPS 118
             DLS IL + M+VGFS+STG++ ++QYILGWSF   G+AQNL+IS+LP LP        
Sbjct: 225 TKDLSSILNNRMYVGFSSSTGLMVASQYILGWSFKVNGQAQNLEISELPKLPA------- 277

Query: 119 ASFSPFAPPPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQKKKYEELYEDWESE 178
                     EK K K    + +  P++ +  V +IT+ G +Y V+ KK++E+ EDWE E
Sbjct: 278 ----------EKKKSK---FLTVGLPLIFLSLVFMITL-GVMYYVKLKKFDEVLEDWEHE 323

Query: 179 YGPQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEF 236
           YGP+RF +KDLY ATKGF+E  L+G GGFG+VYKGV+ +S L +AVK++SH+S Q M+EF
Sbjct: 324 YGPRRFKFKDLYSATKGFREKGLLGVGGFGRVYKGVIQSSKLEVAVKRVSHESIQGMREF 383

Query: 237 VSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           VSEIVS+G LRHRNLVQLHGYCRRK ELLLVY+YM N
Sbjct: 384 VSEIVSIGRLRHRNLVQLHGYCRRKSELLLVYDYMPN 420

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
TAIR|locus:2078342	667	AT3G45420 [Arabidopsis thalian	0.441	0.181	0.516	1.7e-58
TAIR|locus:2168509	674	AT5G59260 [Arabidopsis thalian	0.437	0.178	0.545	1.5e-57
TAIR|locus:2078337	664	AT3G45410 [Arabidopsis thalian	0.441	0.182	0.532	2.5e-55
TAIR|locus:2085587	669	AT3G45440 [Arabidopsis thalian	0.419	0.171	0.550	1.5e-53
TAIR|locus:2078332	682	AT3G45330 [Arabidopsis thalian	0.430	0.173	0.504	4.8e-52
TAIR|locus:2158309	675	AT5G60320 [Arabidopsis thalian	0.437	0.177	0.504	5.3e-51
TAIR|locus:2144025	657	AT5G60280 [Arabidopsis thalian	0.427	0.178	0.516	8.2e-51
TAIR|locus:2020593	656	AT1G70130 [Arabidopsis thalian	0.434	0.181	0.504	5.7e-50
TAIR|locus:2119936	669	AT4G29050 [Arabidopsis thalian	0.427	0.174	0.55	9.6e-50
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.412	0.167	0.543	1.9e-49

TAIR|locus:2078342 AT3G45420 [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
 Identities = 63/122 (51%), Positives = 82/122 (67%)

Query:   153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGF-KELIXXXXXXXXXXX 211
             ++ + G +Y  ++KKY E+ E WE EYGP R+SYK LYKAT GF K+ +           
Sbjct:   307 VLMVLGGVYWYRRKKYAEVKESWEKEYGPHRYSYKSLYKATNGFVKDALVGKGGFGKVYK 366

Query:   212 XLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
                  G  IAVK++SHD+EQ MK+FV+E+V+MG ++HRNLV L GYCRRK ELLLV  YM
Sbjct:   367 GTLPGGRHIAVKRLSHDAEQGMKQFVAEVVTMGNIQHRNLVPLLGYCRRKGELLLVSEYM 426

Query:   272 HN 273
              N
Sbjct:   427 SN 428

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2168509 AT5G59260 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.5e-57, Sum P(2) = 1.5e-57
 Identities = 66/121 (54%), Positives = 86/121 (71%)

Query:   154 ITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKE-LIXXXXXXXXXXXX 212
             +T+ G +Y+ +KKKY E+ E WE EY PQR+S++ LYKATKGF+E  +            
Sbjct:   313 LTLGGIVYLYKKKKYAEVLEQWEKEYSPQRYSFRILYKATKGFRENQLLGAGGFGKVYKG 372

Query:   213 LSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH 272
             +  SG  IAVK++ HD+EQ MK++V+EI SMG LRH+NLV L GYCRRK ELLLVY+YM 
Sbjct:   373 ILPSGTQIAVKRVYHDAEQGMKQYVAEIASMGRLRHKNLVHLLGYCRRKGELLLVYDYMP 432

Query:   273 N 273
             N
Sbjct:   433 N 433

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2078337 AT3G45410 [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
 Identities = 65/122 (53%), Positives = 81/122 (66%)

Query:   153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGF-KELIXXXXXXXXXXX 211
             ++ + G +Y  ++KKY E+ E WE EYGP RFSYK LYKAT GF K+             
Sbjct:   299 VVMVLGGVYWYRRKKYAEVKEWWEKEYGPHRFSYKSLYKATNGFRKDCRVGKGGFGEVYK 358

Query:   212 XLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
                  G  IAVK++SHD+EQ MK+FV+E+V+MG L+HRNLV L GYCRRK ELLLV  YM
Sbjct:   359 GTLPGGRHIAVKRLSHDAEQGMKQFVAEVVTMGNLQHRNLVPLLGYCRRKCELLLVSEYM 418

Query:   272 HN 273
              N
Sbjct:   419 PN 420

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071472 "cellular response to salt stress" evidence=IEP

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2085587 AT3G45440 [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
 Identities = 65/118 (55%), Positives = 83/118 (70%)

Query:   158 GAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKE--LIXXXXXXXXXXXXLST 215
             GA Y+ +++KY E+ E+WE EYGP RFSYKDLY AT GF +  L+            L +
Sbjct:   304 GAAYVYRRRKYAEIREEWEKEYGPHRFSYKDLYIATNGFNKDGLLGKGGFGKVYKGTLPS 363

Query:   216 SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
              G  IAVK++SHD+E+ MK+FV+EIVSMG L+H+N+V L GYCRRK ELLLV  YM N
Sbjct:   364 KG-QIAVKRVSHDAEEGMKQFVAEIVSMGNLKHKNMVPLLGYCRRKGELLLVSEYMPN 420

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2078332 AT3G45330 [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
 Identities = 61/121 (50%), Positives = 82/121 (67%)

Query:   153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKE--LIXXXXXXXXXX 210
             ++ + G  Y+ ++KKY E+ E WE  YGP R+SYK LYKAT+GF +   +          
Sbjct:   305 VMVVVGGFYLYRRKKYAEVREPWEKPYGPLRYSYKSLYKATRGFNKDGRLGRGGFGEVYK 364

Query:   211 XXLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY 270
               L   G  IAVK++SHD+EQ MK+FV+E+V+MG+L+H+NLV L GYCRRK ELLLV  Y
Sbjct:   365 GTLPILG-DIAVKRLSHDAEQGMKQFVAEVVTMGSLQHKNLVPLLGYCRRKGELLLVSKY 423

Query:   271 M 271
             M
Sbjct:   424 M 424

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2158309 AT5G60320 [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.3e-51, Sum P(2) = 5.3e-51
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:   153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKE--LIXXXXXXXXXX 210
             ++ + G IY+ ++KKY E+ E WE EY P RFSYK LYKAT  F +   +          
Sbjct:   305 MLAVLGGIYLYRRKKYAEVREVWEKEYSPHRFSYKSLYKATNRFDKDGRLGKGGFGEVYR 364

Query:   211 XXLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY 270
               L   G  IAVK++ HD++Q MK+FV+E+V+MG+L+HRNLV L GYCRRK ELLLV  Y
Sbjct:   365 GNLPHVG-DIAVKRVCHDAKQGMKQFVAEVVTMGSLKHRNLVPLLGYCRRKGELLLVSEY 423

Query:   271 MHN 273
             M N
Sbjct:   424 MSN 426

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2144025 AT5G60280 [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 8.2e-51, Sum P(2) = 8.2e-51
 Identities = 64/124 (51%), Positives = 78/124 (62%)

Query:   153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIXXXXXXXXXXXX 212
             L+ + GA Y+ ++ KY E+ E+WE EYGP R+SYK LYKATKGF +              
Sbjct:   297 LVLLVGA-YLYRRNKYAEVREEWEKEYGPHRYSYKSLYKATKGFHK---DGFLGKGGFGE 352

Query:   213 LSTSGLP---IAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN 269
             +    LP   IAVK+ SH  E+ MK+FV+EI SMG L HRNLV L GYCRRK E LLV  
Sbjct:   353 VYKGTLPQEDIAVKRFSHHGERGMKQFVAEIASMGCLDHRNLVPLFGYCRRKGEFLLVSK 412

Query:   270 YMHN 273
             YM N
Sbjct:   413 YMPN 416

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2020593 AT1G70130 [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 5.7e-50, Sum P(2) = 5.7e-50
 Identities = 61/121 (50%), Positives = 86/121 (71%)

Query:   153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFK--ELIXXXXXXXXXX 210
             ++ I G +  +++KK+ E+ EDWE ++GP +F+YKDL+ ATKGFK  E++          
Sbjct:   291 IVLILGVMLFLKRKKFLEVIEDWEVQFGPHKFTYKDLFIATKGFKNSEVLGKGGFGKVFK 350

Query:   211 XXLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY 270
               L  S +PIAVKKISHDS Q M+EF++EI ++G LRH +LV+L GYCRRK EL LVY++
Sbjct:   351 GILPLSSIPIAVKKISHDSRQGMREFLAEIATIGRLRHPDLVRLLGYCRRKGELYLVYDF 410

Query:   271 M 271
             M
Sbjct:   411 M 411

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2119936 AT4G29050 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 9.6e-50, Sum P(2) = 9.6e-50
 Identities = 66/120 (55%), Positives = 86/120 (71%)

Query:   154 ITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFK--ELIXXXXXXXXXXX 211
             +TIS  +++ ++KK  E+ EDWE ++GP RF+YKDLY ATKGF+  EL+           
Sbjct:   303 LTISYMLFL-KRKKLMEVLEDWEVQFGPHRFAYKDLYIATKGFRNSELLGKGGFGKVYKG 361

Query:   212 XLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
              LSTS + IAVKK+SHDS Q M+EFV+EI ++G LRH NLV+L GYCRRK EL LVY+ M
Sbjct:   362 TLSTSNMDIAVKKVSHDSRQGMREFVAEIATIGRLRHPNLVRLLGYCRRKGELYLVYDCM 421

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
 Identities = 63/116 (54%), Positives = 81/116 (69%)

Query:   161 YIVQKK-KYEELYEDWESEYGPQRFSYKDLYKATKGFKE--LIXXXXXXXXXXXXLSTSG 217
             YIV+++ K+ E  E+WE E+G  RF +KDLY ATKGFKE  L+            +  + 
Sbjct:   311 YIVRRRRKFAEELEEWEKEFGKNRFRFKDLYYATKGFKEKGLLGTGGFGSVYKGVMPGTK 370

Query:   218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
             L IAVK++SH+S Q MKEFV+EIVS+G + HRNLV L GYCRR+ ELLLVY+YM N
Sbjct:   371 LEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPN 426

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	274
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	4e-35
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	4e-34
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-17
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-17
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-16
cd01951	223	cd01951, lectin_L-type, legume lectins	8e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-13
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	5e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-10
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-09
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	6e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	8e-09
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-08
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	6e-08
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-08
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-07
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-07
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-07
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	5e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	6e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	7e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	9e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-06
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-06
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	5e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-06
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	8e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-05
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	4e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	6e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	7e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-05
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-04
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	8e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	8e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.001
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.001
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	0.001
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.001
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.001
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.002
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.002
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.002
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.002
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.002
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.002
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.002
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.002
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.003
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.003
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	0.004
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.004
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.004
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.004

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score =  125 bits (317), Expect = 4e-35
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 4/92 (4%)

Query: 2   DSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLD 61
            S  A Y+ D+G      L+SG PMQ WIDY+   K L+VTLA   V+KP +PLLS P+D
Sbjct: 146 VSVKAGYWDDDG----GKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVD 201

Query: 62  LSQILLDTMHVGFSASTGILTSNQYILGWSFS 93
           LS++L + ++VGFSASTG+LT   YIL WSFS
Sbjct: 202 LSKVLPEEVYVGFSASTGLLTELHYILSWSFS 233

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score =  123 bits (310), Expect = 4e-34
 Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 2/80 (2%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
           S + LDL SG P+Q+WIDY+G  K L+VTLA    +KP RPLLS  +DLS +L + ++VG
Sbjct: 154 SFVPLDLNSGKPIQVWIDYDGSSKRLSVTLAY--PNKPKRPLLSASVDLSTVLPEWVYVG 211

Query: 74  FSASTGILTSNQYILGWSFS 93
           FSASTG  T + Y+L WSFS
Sbjct: 212 FSASTGGATESHYVLSWSFS 231

Length = 231

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 79.1 bits (196), Expect = 2e-17
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLS----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRN 250
             + +G+G FG+VYKG L        + +AVK +  D SEQ ++EF+ E   M  L H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +V+L G C  ++ L +V  YM  
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEG 85

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 79.1 bits (196), Expect = 2e-17
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVL----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRN 250
             + +G+G FG+VYKG L        + +AVK +  D SEQ ++EF+ E   M  L H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +V+L G C  ++ L++V  YM  
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPG 85

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 78.3 bits (194), Expect = 4e-17
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQ 253
           + +G+G FG+VYKG L         +AVK +  D SE+  K+F+ E   M  L H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 254 LHGYCRRKQELLLVYNYMHN 273
           L G C  ++ L LV  YM  
Sbjct: 61  LLGVCTEEEPLYLVLEYMEG 80

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 76.0 bits (188), Expect = 3e-16
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRN 250
             + +G+G FG+VYKG L   G      +AVK +    SE+  +EF+ E   M  L H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62

Query: 251 LVQLHGYCRRKQELLLVYNYM 271
           +V+L G C + + L +V  YM
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYM 83

Length = 258

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score = 68.6 bits (168), Expect = 8e-14
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)

Query: 1   NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
           N +  A   S   +++      GN   + I Y+     L V L     S      ++ P+
Sbjct: 132 NGNNTALATSLGSASLPNGTGLGNEHTVRITYDPTTNTLTVYL--DNGSTLTSLDITIPV 189

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSFS 93
           DL Q+     + GF+ASTG LT+   IL WSF+
Sbjct: 190 DLIQLGPTKAYFGFTASTGGLTNLHDILNWSFT 222

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE--FVSEIVSMGALRHRNLVQ 253
               +G G FG VYK     +G  +AVK +   SE+  K+     EI  +  L H N+V+
Sbjct: 3   LLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVR 62

Query: 254 LHGYCRRKQELLLVYNYM 271
           L      K  L LV  Y 
Sbjct: 63  LIDAFEDKDHLYLVMEYC 80

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKIS-HDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC 258
           +G+GGFG VY      +G  +A+K I   DS   ++E + EI  +  L H N+V+L+G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 259 RRKQELLLVYNYMHN 273
             +  L LV  Y   
Sbjct: 61  EDENHLYLVMEYCEG 75

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 66.4 bits (163), Expect = 6e-13
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE-FVSEIVSMGALRHRNLVQL 254
             E +G+G FGKVY      +G  +A+K I     +  +E  + EI  +  L+H N+V+L
Sbjct: 3   ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRL 62

Query: 255 HGYCRRKQELLLVYNYM 271
           +     + +L LV  Y 
Sbjct: 63  YDVFEDEDKLYLVMEYC 79

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQ 253
             +LIG+G FG VYKG+   +G  +A+K+IS     E+ +K  + EI  +  L+H N+V+
Sbjct: 4   LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK 63

Query: 254 LHGYCRRKQELLLVYNYMHN 273
             G       L ++  Y  N
Sbjct: 64  YIGSIETSDSLYIILEYAEN 83

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.5 bits (145), Expect = 2e-10
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 5/81 (6%)

Query: 193 TKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRN 250
           T+G  EL+G+G FG VY  +   +G  +AVK +  S DSE+ ++    EI  + +L+H N
Sbjct: 3   TRG--ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 251 LVQLHGYCRRKQELLLVYNYM 271
           +V+ +G   R +E   +  ++
Sbjct: 61  IVRYYG-SERDEEKNTLNIFL 80

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
               IGKG FG V  G     G  +AVK +  DS    + F++E   M  LRH NLVQL 
Sbjct: 10  LGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTA-AQAFLAEASVMTTLRHPNLVQLL 66

Query: 256 GYCRRKQELLLVYNYM 271
           G   +   L +V  YM
Sbjct: 67  GVVLQGNPLYIVTEYM 82

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           K  +G G +G+VY+GV     L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G
Sbjct: 11  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 69

Query: 257 YCRRKQELLLVYNYMHN 273
            C R+    ++  +M  
Sbjct: 70  VCTREPPFYIITEFMTY 86

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 58.0 bits (141), Expect = 6e-10
 Identities = 26/75 (34%), Positives = 45/75 (60%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
            E IGKGGFG+VYK     +G  +A+K I  +S++  ++ ++EI  +   +H N+V+ +G
Sbjct: 5   LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYG 64

Query: 257 YCRRKQELLLVYNYM 271
              +K EL +V  + 
Sbjct: 65  SYLKKDELWIVMEFC 79

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCR 259
           +G G FG+V++G+     + +A+K +  D     ++F  E+ ++  LRH++L+ L   C 
Sbjct: 14  LGSGYFGEVWEGLWKNR-VRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS 72

Query: 260 RKQELLLVYNYM 271
             + + ++   M
Sbjct: 73  VGEPVYIITELM 84

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 55.0 bits (132), Expect = 6e-09
 Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 197 KELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLV 252
           +++IG G FG+V++G+L   G   + +A+K +    +E+  ++F+SE   MG   H N++
Sbjct: 10  QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNII 69

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
           +L G   + +  +++  YM N
Sbjct: 70  RLEGVVTKFKPAMIITEYMEN 90

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 54.8 bits (132), Expect = 8e-09
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLP------IAVKKISHDSEQWMKE-FVSEIVSMGALRH 248
            K  +G+G FGKV+ G       P      +AVK +   +    ++ F  E   +   +H
Sbjct: 9   LKRELGEGAFGKVFLGECY-HLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH 67

Query: 249 RNLVQLHGYCRRKQELLLVYNYMHN 273
            N+V+ +G C      ++V+ YM +
Sbjct: 68  ENIVKFYGVCTEGDPPIMVFEYMEH 92

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 8/82 (9%)

Query: 198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKI---SHDSEQWMKEFVSEIVSMGALRHRNL 251
           ++IG G FG+V +G L   G   + +A+K +   S D ++   +F++E   MG   H N+
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRL--DFLTEASIMGQFDHPNI 67

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           ++L G   + + ++++  YM N
Sbjct: 68  IRLEGVVTKSRPVMIITEYMEN 89

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           IG+G +G VYK     +G  +A+KKI    +SE   K  + EI  +  L H N+++L   
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 258 CRRKQELLLVYNYMH 272
            R K +L LV+ +M 
Sbjct: 67  FRHKGDLYLVFEFMD 81

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE-FVSEIVSMGALRHRNLVQLHG 256
           E IGKG FG VYKGVL  +   +AVK         +K  F+ E   +    H N+V+L G
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTE-VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIG 59

Query: 257 YCRRKQELLLVYNYM 271
            C +KQ + +V   +
Sbjct: 60  VCVQKQPIYIVMELV 74

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 51.9 bits (124), Expect = 7e-08
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQLHG 256
           EL+GKG FG+V+KG L     P+AVK    D  Q +K +F+SE   +    H N+V+L G
Sbjct: 1   ELLGKGNFGEVFKGTLKDK-TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIG 59

Query: 257 YCRRKQELLLV 267
            C ++Q + +V
Sbjct: 60  VCTQRQPIYIV 70

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 52.5 bits (126), Expect = 8e-08
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 127 PPEKAKEKGRGPIIIVFPIVAVFAVALITISGAIYIVQK-----KKYEELYEDWESEYGP 181
           PP K   K       +   +  F V  +   G ++I  +     K+ E     WE ++  
Sbjct: 617 PPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFD 676

Query: 182 QRFS----YKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV 237
            + S      D+  + K  + +I +G  G  YKG    +G+   VK+I+ D        +
Sbjct: 677 SKVSKSITINDILSSLKE-ENVISRGKKGASYKGKSIKNGMQFVVKEIN-DVNSIPSSEI 734

Query: 238 SEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK 274
           ++   MG L+H N+V+L G CR ++   L++ Y+  K
Sbjct: 735 AD---MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK 768

Length = 968

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)

Query: 196 FKELIGKGGFGKVYKGVLST-----SGLPIAVK--KISHDSEQWMKEFVSEIVSMGALRH 248
           F E +G+G FGKVYKG L+      S   +A+K  K + + +   +EF  E   M  L+H
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ-QEFRQEAELMSDLQH 67

Query: 249 RNLVQLHGYCRRKQELLLVYNYMHN 273
            N+V L G C ++Q   +++ Y+ +
Sbjct: 68  PNIVCLLGVCTKEQPTCMLFEYLAH 92

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 196 FKELIGKGGFGKV----YKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNL 251
           F + +GKG FG V    Y  +   +G  +AVKK+ H + + +++F  EI  + +L+H N+
Sbjct: 8   FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI 67

Query: 252 VQLHGYC--RRKQELLLVYNYM 271
           V+  G C    ++ L LV  Y+
Sbjct: 68  VKYKGVCYSAGRRNLRLVMEYL 89

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 197 KELIGKGGFGKVYKGVLSTSG---LPIAVKKI-SHDSEQWMKEFVSEIVSMGALRHRNLV 252
           +E+IG G FG+V +G L   G   + +A+K + S  +E+  ++F+SE   MG   H N++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
            L G   + + ++++  +M N
Sbjct: 69  HLEGVVTKSRPVMIITEFMEN 89

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEF-VSEIVSMGALRHRNLVQLHG 256
           E +G+G +  VYKG   T+G  +A+K+I  D+E+      + EI  M  L+H N+V+LH 
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHD 65

Query: 257 YCRRKQELLLVYNYMHN 273
               + +L+LV+ YM  
Sbjct: 66  VIHTENKLMLVFEYMDK 82

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            ++G+G +G V K     +G  +A+K  K S D E   K  + E+  +  LRH N+V L 
Sbjct: 7   GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLK 66

Query: 256 GYCRRKQELLLVYNYMHN 273
              RRK  L LV+ Y+  
Sbjct: 67  EAFRRKGRLYLVFEYVER 84

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQ 253
           + +G G FG V +G  STSG   +P+AVK +  D     M +F+ E   M +L H NL++
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 254 LHG 256
           L+G
Sbjct: 61  LYG 63

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
               +G G FG+V++G+ + +  P+AVK +   +    K+F++E   M  LRH  L+QL+
Sbjct: 10  LLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLY 67

Query: 256 GYCRRKQELLLVYNYMHN 273
             C  ++ + +V   M  
Sbjct: 68  AVCTLEEPIYIVTELMKY 85

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 49.1 bits (118), Expect = 6e-07
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL 246
           ++LYK      E IG+G  G+VYK     +G  +A+KK+    +Q  +  ++EI+ M   
Sbjct: 18  RELYK----NLEKIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDC 72

Query: 247 RHRNLVQLHGYCRRKQELLLVYNYM 271
           +H N+V  +       EL +V  YM
Sbjct: 73  KHPNIVDYYDSYLVGDELWVVMEYM 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 200 IGKGGFGKVYKGVLSTSG----LPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQL 254
           +G G FG VYKGV    G    +P+A+K +  ++  +  KE + E   M ++ H ++V+L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 255 HGYCRRKQELLLVYNYM 271
            G C   Q + L+   M
Sbjct: 75  LGICLSSQ-VQLITQLM 90

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            L+G+G +G V K     +G  +A+KK   S D +   K  + EI  +  LRH NLV L 
Sbjct: 7   GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLI 66

Query: 256 GYCRRKQELLLVYNYMHN 273
              RRK+ L LV+ ++ +
Sbjct: 67  EVFRRKKRLYLVFEFVDH 84

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 48.6 bits (117), Expect = 9e-07
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNL 251
            E +G+G +G VYK     +G  +A+KKI  D+E   +E +      EI  +  L+H N+
Sbjct: 4   LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE---EEGIPSTALREISLLKELKHPNI 60

Query: 252 VQLHGYCRRKQELLLVYNYM 271
           V+L      +++L LV+ Y 
Sbjct: 61  VKLLDVIHTERKLYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 200 IGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQ 253
           +G G FG+VY+G+          L +AVK +    SEQ   +F+ E + M    H+N+V+
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 254 LHGYCRRKQELLLVYNYM 271
           L G    +    ++   M
Sbjct: 74  LIGVSFERLPRFILLELM 91

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           + IGKG FG V  G     G  +AVK I +D+    + F++E   M  LRH NLVQL G 
Sbjct: 12  QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 67

Query: 258 -CRRKQELLLVYNYM 271
               K  L +V  YM
Sbjct: 68  IVEEKGGLYIVTEYM 82

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 197 KELIGKGGFGKVYKGV---LSTSGLPIAVKKISHDSEQWMKE-FVSEIVSMGALRHRNLV 252
              IG+G FG VY+GV        + +AVK   + +   ++E F+ E   M    H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 253 QLHGYC 258
           +L G  
Sbjct: 71  KLIGVI 76

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 197 KELIGKGGFGKVYKGVLSTSG---LPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRNL 251
           +++IG G FG+V  G L   G   +P+A+K  K  + +E+  ++F+SE   MG   H N+
Sbjct: 9   EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNI 67

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           + L G   + + +++V  YM N
Sbjct: 68  IHLEGVVTKSKPVMIVTEYMEN 89

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 12/92 (13%)

Query: 190 YKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKK------ISHDSEQWMKEFV----SE 239
           +K  KG  ELIGKG +G+VY  +  T+G  +AVK+      I+   +   K+ V    SE
Sbjct: 1   FKWVKG--ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSE 58

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           I ++  L H N+VQ  G+   ++ L +   Y+
Sbjct: 59  IETLKDLDHLNIVQYLGFETTEEYLSIFLEYV 90

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G VYK     +G  +A+KKI  D  +E      + EI  +  L H N+V+L 
Sbjct: 6   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65

Query: 256 GYCRRKQELLLVYNYMH 272
                + +L LV+ ++H
Sbjct: 66  DVIHTENKLYLVFEFLH 82

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMK--EFVSEIVSMGALRHRNLVQL 254
           +  +G G FG+V+ G  + +   +AVK +   +   M    F+ E   M  LRH  LVQL
Sbjct: 11  ERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQL 66

Query: 255 HGYCRRKQELLLVYNYMHN 273
           +  C  ++ + +V  YM  
Sbjct: 67  YAVCSEEEPIYIVTEYMSK 85

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           IG+G +G V+K     +G  +A+KK   S D     K  + EI  +  L+H NLV L   
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68

Query: 258 CRRKQELLLVYNY 270
            RRK++L LV+ Y
Sbjct: 69  FRRKRKLHLVFEY 81

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 200 IGKGGFGKVYKGVLS----TSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQL 254
           +G+G FGKV           +G  +AVK ++H   EQ   +F  EI  +  L H N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKY 71

Query: 255 HGYC--RRKQELLLVYNYM 271
            G C     + L L+  Y+
Sbjct: 72  KGVCEKPGGRSLRLIMEYL 90

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             E +G+G +G VYK +   +G  +A+K +  + +  ++E + EI  +       +V+ +
Sbjct: 7   ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYY 64

Query: 256 GYCRRKQELLLVYNY 270
           G   +  +L +V  Y
Sbjct: 65  GSYFKNTDLWIVMEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE--FVSEIVSMGALRHRNLVQ 253
           F + +G G FG V+ G      + +A+K I    E  M E  F+ E   M  L H NLVQ
Sbjct: 8   FLKELGSGQFGVVHLGKWRGK-IDVAIKMIR---EGAMSEDDFIEEAKVMMKLSHPNLVQ 63

Query: 254 LHGYCRRKQELLLVYNYMHN 273
           L+G C +++ + +V  YM N
Sbjct: 64  LYGVCTKQRPIFIVTEYMAN 83

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 199 LIGKGGFGKVY----KGVLSTSG-LPIAVKKISH-DSEQWMKEFVSEIVSMGALRHRNLV 252
            +G+G FG+V+    KG+    G   + VK +     E    EF  E+     L H+N+V
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71

Query: 253 QLHGYCRRKQELLLVYNY 270
           +L G CR  +   ++  Y
Sbjct: 72  RLLGLCREAEPHYMILEY 89

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 197 KELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLV 252
           + ++G G FG++ +G L       LP+A+  +    S++  + F++E +++G   H N+V
Sbjct: 10  ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIV 69

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
           +L G   R   +++V  YM N
Sbjct: 70  RLEGVITRGNTMMIVTEYMSN 90

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKIS-----HDSEQWMKEFVSEIVSMGALRHRNLV 252
           EL+G G FG VY+G+    G   AVK++S        ++ +K+   EI  +  L+H N+V
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 253 QLHG 256
           Q  G
Sbjct: 66  QYLG 69

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 46.1 bits (109), Expect = 8e-06
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 15/93 (16%)

Query: 196 FKELIGKGGFGKVY----KGVLSTSGLP----------IAVKKISHDSEQWMK-EFVSEI 240
            KE +G+G FG+V+    +G+    G            +AVK +  D  +  + +F+ EI
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
             M  L++ N+++L G C     L ++  YM N
Sbjct: 69  KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMEN 101

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 8/78 (10%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEF----VSEIVSMGALRHRNLVQLH 255
           IG+G +G+VYK     +G  +A+KKI  ++E+    F    + EI  +  LRH N+V+L 
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMENEKE--GFPITAIREIKLLQKLRHPNIVRLK 64

Query: 256 GYCRRKQ--ELLLVYNYM 271
                K    + +V+ YM
Sbjct: 65  EIVTSKGKGSIYMVFEYM 82

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 11/82 (13%)

Query: 199 LIGKGGFGKVYKGVL------STSGLPIAVK---KISHDSEQWMKEFVSEIVSMGALRHR 249
            +G G FG+VY+G         +  + +AVK   K + D E+  KEF+ E   M    H 
Sbjct: 2   FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEK--KEFLKEAHLMSNFNHP 59

Query: 250 NLVQLHGYCRRKQELLLVYNYM 271
           N+V+L G C   +   ++   M
Sbjct: 60  NIVKLLGVCLLNEPQYIIMELM 81

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G V+K     +   +A+K++    D E      + EI  +  L+H+N+V+L+
Sbjct: 6   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY 65

Query: 256 GYCRRKQELLLVYNY 270
                 ++L LV+ Y
Sbjct: 66  DVLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQLHG 256
           E +G+G +  VYKG+   +G  +A+K IS  +E+ +    + E   +  L+H N+V LH 
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHD 70

Query: 257 YCRRKQELLLVYNYMH 272
               K+ L  V+ YMH
Sbjct: 71  IIHTKETLTFVFEYMH 86

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 22/75 (29%), Positives = 34/75 (45%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             + IG G +G VYK     +G  +A+K I  +     +    EI  +   RH N+V   
Sbjct: 7   LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYF 66

Query: 256 GYCRRKQELLLVYNY 270
           G   R+ +L +V  Y
Sbjct: 67  GSYLRRDKLWIVMEY 81

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKIS-HDSEQWM-KEFVSEIVSMGALRHRNLVQLHG 256
           IG G FGKVY  V   +G  +AVK+I   D++    KE   E+  +  L+H NLV+ +G
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRN 250
             + +G+G +  VYK     +G  +A+KKI     +  K+ ++     EI  +  L+H N
Sbjct: 4   KGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPN 63

Query: 251 LVQLHGYCRRKQELLLVYNYMH 272
           ++ L      K  + LV+ +M 
Sbjct: 64  IIGLLDVFGHKSNINLVFEFME 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           +G+G  G VYK     +G   A+KKI    D E   K+ + E+ ++ +     +V+ +G 
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEF-RKQLLRELKTLRSCESPYVVKCYGA 67

Query: 258 CRRKQELLLVYNYM 271
             ++ E+ +V  YM
Sbjct: 68  FYKEGEISIVLEYM 81

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 11/87 (12%)

Query: 198 ELIGKGGFGKVYKGVLS---TSGLPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRNLV 252
           +++G+G FG V +G LS    S L +AVK  K+   +   ++EF+SE   M    H N++
Sbjct: 5   KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVM 64

Query: 253 QLHGYCRRKQEL------LLVYNYMHN 273
           +L G C     L      +++  +M +
Sbjct: 65  KLIGVCFEASSLQKIPKPMVILPFMKH 91

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 200 IGKGGFGKVYKGVL---STSGLPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQLH 255
           +G G FG V KGV    S   + +AVK +  +     K EF+ E   M  L H  +V+L 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 256 GYCRRKQELLLV 267
           G C+ +  L+LV
Sbjct: 63  GVCKGEP-LMLV 73

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW---MKEFVSEIVSMGAL-RHRNLVQLH 255
           +G G FG VY      +G  +A+KK+      W   M   + E+ S+  L  H N+V+L 
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMN--LREVKSLRKLNEHPNIVKLK 64

Query: 256 GYCRRKQELLLVYNYMHN 273
              R   EL  V+ YM  
Sbjct: 65  EVFRENDELYFVFEYMEG 82

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQLHG 256
           E IG+G FG+V+ G L     P+AVK         +K +F+ E   +    H N+V+L G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 257 YCRRKQELLLV 267
            C +KQ + +V
Sbjct: 61  VCTQKQPIYIV 71

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE--FVSEIVSMGALRHRNLVQLHGY 257
           IG G FG V+ G        +A+K I    E  M E  F+ E   M  L H  LVQL+G 
Sbjct: 12  IGSGQFGLVWLGYWLEKR-KVAIKTIR---EGAMSEEDFIEEAQVMMKLSHPKLVQLYGV 67

Query: 258 CRRKQELLLVYNYMHN 273
           C  +  + LV+ +M +
Sbjct: 68  CTERSPICLVFEFMEH 83

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 193 TKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD------SEQWMKEFVSEIVSMGAL 246
           TKG  E++GKG +G VY G+ +   L IAVK++  D      +E+  ++   E+  + +L
Sbjct: 3   TKG--EVLGKGAYGTVYCGLTNQGQL-IAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL 59

Query: 247 RHRNLVQLHGYC 258
           +H N+VQ  G C
Sbjct: 60  KHVNIVQYLGTC 71

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE-----FVSEIVSMGALRHRNLVQL 254
           IG+G +G+VYK     +G  +A+KK+  D+E   KE      + EI  +  L HRN+V L
Sbjct: 15  IGEGTYGQVYKARDKDTGELVALKKVRLDNE---KEGFPITAIREIKILRQLNHRNIVNL 71

Query: 255 H----------GYCRRKQELLLVYNYM 271
                       + + K    LV+ YM
Sbjct: 72  KEIVTDKQDALDFKKDKGAFYLVFEYM 98

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           E IGKG FG+VYK +   +   +A+K I  + +E  +++   EI  +   R   + + +G
Sbjct: 7   ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYG 66

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE--FVSEIVSMGALRHRNLVQ 253
           F + +G G FG V+ G      + +A+K I+   E  M E  F+ E   M  L H  LVQ
Sbjct: 8   FMKELGSGQFGVVHLGKWRAQ-IKVAIKAIN---EGAMSEEDFIEEAKVMMKLSHPKLVQ 63

Query: 254 LHGYCRRKQELLLVYNYMHN 273
           L+G C +++ L +V  +M N
Sbjct: 64  LYGVCTQQKPLYIVTEFMEN 83

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ--WMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G VYKG    +G  +A+KKI  +SE+       + EI  +  L+H N+V L 
Sbjct: 6   EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65

Query: 256 GYCRRKQELLLVYNYM 271
               ++  L L++ ++
Sbjct: 66  DVLMQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           +G G FGKVYK     +GL  A K I  +SE+ +++F+ EI  +   +H N+V L+ 
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYE 69

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV-----SEIVSMGALRHRNLV 252
           E IG+G +G VYK     +G  +A+KKI  ++E    E V      EI  +  L H N+V
Sbjct: 5   EKIGEGTYGVVYKARDKLTGEIVALKKIRLETE---DEGVPSTAIREISLLKELNHPNIV 61

Query: 253 QLHGYCRRKQELLLVYNYMH 272
           +L      + +L LV+ ++ 
Sbjct: 62  RLLDVVHSENKLYLVFEFLD 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 200 IGKGGFGKVYK----GVLSTSG-LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQ 253
           IG+G FG+V++    G+L       +AVK +  + S     +F  E   M    H N+V+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 254 LHGYCRRKQELLLVYNYM 271
           L G C   + + L++ YM
Sbjct: 73  LLGVCAVGKPMCLLFEYM 90

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 200 IGKGGFGKVYKGVLST-----SGLPIAVKKIS-HDSEQWMKEFVSEIVSMGALRHRNLVQ 253
           +G+G FG VY+G+            +A+K ++ + S +   EF++E   M      ++V+
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 254 LHGYCRRKQELLLVYNYM 271
           L G     Q  L+V   M
Sbjct: 74  LLGVVSTGQPTLVVMELM 91

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 17/95 (17%)

Query: 196 FKELIGKGGFGKVY----------------KGVLSTSGLPIAVKKISHD-SEQWMKEFVS 238
           F E +G+G FG+V+                +   + + + +AVK +  D S+   ++F+ 
Sbjct: 9   FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLK 68

Query: 239 EIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           E+  +  L   N+ +L G C     L ++  YM N
Sbjct: 69  EVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMEN 103

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 43.1 bits (101), Expect = 7e-05
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 200 IGKGGFGKVYKGVLS-----TSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
           +G+G FGKV+             + +AVK +   SE   ++F  E   +  L+H+++V+ 
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 255 HGYCRRKQELLLVYNYM 271
           +G C   + LL+V+ YM
Sbjct: 73  YGVCTEGRPLLMVFEYM 89

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQLHG 256
           E +G+G +  VYKG    +G  +A+K I    E+      + E   +  L+H N+V LH 
Sbjct: 11  EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHD 70

Query: 257 YCRRKQELLLVYNYMH 272
               K+ L LV+ Y+H
Sbjct: 71  IIHTKETLTLVFEYVH 86

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLP----IAVKKIS--HDSEQWMKEFVSEIVSMGALRHR 249
           F E +G+  FGK+YKG L   G+     +A+K +   ++ +QW  EF  E   M  L H 
Sbjct: 9   FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQW-GEFQQEASLMAELHHP 67

Query: 250 NLVQLHGYCRRKQELLLVYNYM 271
           N+V L G   ++Q + +++ Y+
Sbjct: 68  NIVCLLGVVTQEQPVCMLFEYL 89

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 196 FKELIGKGGFGKV-----YKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN 250
            K  +G+G FGKV     Y        + +AVK +   S+   K+F  E   +  L+H +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 68

Query: 251 LVQLHGYCRRKQELLLVYNYM 271
           +V+ +G C     L++V+ YM
Sbjct: 69  IVKFYGVCVEGDPLIMVFEYM 89

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
            + IGKG FGKVY     + G    +K+I  S+ SE+  ++ ++E+  +  L H N+++ 
Sbjct: 5   IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY 64

Query: 255 H 255
           +
Sbjct: 65  Y 65

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 192 ATKGFKELIGKGGFGKVYKGVL--STSGLP---IAVKKISHDSEQWMKE-FVSEIVSMGA 245
           +T  F E +G+  FGKVYKG L  +  G     +A+K +   +E  ++E F  E +    
Sbjct: 5   STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR 64

Query: 246 LRHRNLVQLHGYCRRKQELLLVYNY 270
           L+H N+V L G   ++Q L ++++Y
Sbjct: 65  LQHPNIVCLLGVVTKEQPLSMIFSY 89

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 10/80 (12%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IGKG FG V K    + G  +  K+I +   +E+  ++ VSE+  +  L+H N+V+  
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVR-- 63

Query: 256 GYCRR-----KQELLLVYNY 270
            Y  R      Q L +V  Y
Sbjct: 64  -YYDRIIDRSNQTLYIVMEY 82

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G VYK     +   IA+KKI    + E      + EI  +  ++H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67

Query: 256 GYCRRKQELLLVYNYM 271
                ++ L LV+ Y+
Sbjct: 68  DVVHSEKRLYLVFEYL 83

Length = 294

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           KEL G G FG V  G        +A+K I   S     EF+ E   M  L H  LVQL+G
Sbjct: 10  KEL-GTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLYG 66

Query: 257 YCRRKQELLLVYNYMHN 273
            C +++ + +V  YM N
Sbjct: 67  VCTKQRPIYIVTEYMSN 83

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)

Query: 198 ELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLV 252
           +L+G G FG V+KG+    G    +P+A+K I   S  Q  +E    +++MG+L H  +V
Sbjct: 13  KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIV 72

Query: 253 QLHGYC 258
           +L G C
Sbjct: 73  RLLGIC 78

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 6/69 (8%)

Query: 188 DLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR 247
           +L K T G  E+IG+G FG V +G    +G  +AVK I  D     + F+ E   M  L 
Sbjct: 4   NLQKLTLG--EIIGEGEFGAVLQG--EYTGQKVAVKNIKCDVTA--QAFLEETAVMTKLH 57

Query: 248 HRNLVQLHG 256
           H+NLV+L G
Sbjct: 58  HKNLVRLLG 66

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 190 YKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISH--DSEQWMKEFVSEIVSMGALR 247
           Y+  K     IG G +G V   V   +G  +A+KKIS+  D     K  + EI  +  LR
Sbjct: 2   YELLK----PIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR 57

Query: 248 HRNLVQLH 255
           H N++ L 
Sbjct: 58  HENIIGLL 65

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI-----SHDSEQWMKEFVSEIVSMGALRHRNLV 252
           +L+G+G FG+VY      +G  +AVK++     S ++++ +     EI  +  L+H  +V
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIV 67

Query: 253 QLHGYCRRKQELLLVYNYM 271
           Q +G  R  + L +   YM
Sbjct: 68  QYYGCLRDDETLSIFMEYM 86

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLP-----IAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRN 250
           + +G+G FG+V K        P     +AVK +  D +E+ + + VSE+  M  + +H+N
Sbjct: 18  KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 77

Query: 251 LVQLHGYCRRKQELLLVYNYMH 272
           ++ L G C ++  L +V  Y  
Sbjct: 78  IINLLGVCTQEGPLYVVVEYAA 99

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)

Query: 198 ELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLV 252
           +++G G FG VYKG+    G    +P+A+K ++  +  +   EF+ E + M ++ H +LV
Sbjct: 13  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 72

Query: 253 QLHGYC 258
           +L G C
Sbjct: 73  RLLGVC 78

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMK-EFVSEIVSM 243
           +YK L K        +G+G +  VYKG    +G  +A+K+I  + E+      + E   +
Sbjct: 6   TYKKLDK--------LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLL 57

Query: 244 GALRHRNLVQLHGYCRRKQELLLVYNYMH 272
             L+H N+V LH     K+ L LV+ Y+ 
Sbjct: 58  KDLKHANIVTLHDIIHTKKTLTLVFEYLD 86

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 184 FSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD----SEQWMKEFVSE 239
           FS  D  K     +E IG G FG VY      +   +A+KK+S+     +E+W ++ + E
Sbjct: 8   FSKDDPEKLFTDLRE-IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKW-QDIIKE 65

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNY 270
           +  +  LRH N ++  G   R+    LV  Y
Sbjct: 66  VRFLQQLRHPNTIEYKGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 39.6 bits (92), Expect = 8e-04
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 200 IGKGGFGKVYKGVLST--SGLPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           +G+G FG V +G L+   S L +AVK  KI+  +   M++F+SE V M    H N+++L 
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 256 GYCRRKQE 263
           G C +  E
Sbjct: 67  GVCLQTVE 74

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISH--DSEQWMKEFVSEIVSMGALRHRNLV 252
            +IGKG FG VY G L  S    +  AVK ++   D E+ +++F+ E + M    H N++
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEE-VEQFLKEGIIMKDFSHPNVL 59

Query: 253 QLHGYCRRKQEL-LLVYNYM 271
            L G C   +   L+V  YM
Sbjct: 60  SLLGICLPSEGSPLVVLPYM 79

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 195 GFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
           G + ++GKG +G VY     ++ + IA+K+I     ++++    EI     L+HRN+VQ 
Sbjct: 11  GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQY 70

Query: 255 HGYC 258
            G  
Sbjct: 71  LGSD 74

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 198 ELIGKGGFGKVYKGVLSTSG-------LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN 250
           E +G+G F K++KG+    G         + +K +      + + F      M  L H++
Sbjct: 1   ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKH 60

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           LV  +G C    E ++V  Y+  
Sbjct: 61  LVLNYGVCVCGDESIMVQEYVKF 83

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 8/61 (13%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLVQL 254
           IG+G +G VY+   +TSG  +A+KK+  D+E   ++ +      EI  +  LRH N+V+L
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNE---RDGIPISSLREITLLLNLRHPNIVEL 71

Query: 255 H 255
            
Sbjct: 72  K 72

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 19/84 (22%)

Query: 200 IGKGGFGKVYKGVLSTS--GLPIAVKKISHDSEQWMKEFVSEIVSMGALR---------H 248
           IG+G +G+VYK        G   A+KK   D EQ+        +S  A R         H
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY------TGISQSACREIALLRELKH 61

Query: 249 RNLVQLHGYC--RRKQELLLVYNY 270
            N+V L         + + L+++Y
Sbjct: 62  ENVVSLVEVFLEHADKSVYLLFDY 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW-MKEFVSEIVSMGALRH---RNLVQ 253
           ELIG+G +G VY+G    +G  +A+K I+ D+    + +   E+  +  LR     N+ +
Sbjct: 7   ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITK 66

Query: 254 LHGYCRRKQELLLVYNYMH 272
            +G   +   L ++  Y  
Sbjct: 67  YYGSYLKGPRLWIIMEYAE 85

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.0 bits (89), Expect = 0.002
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRH-RNL 251
               +G+G FG+VY          +A+K ++       + ++ F+ EI  + +L H  N+
Sbjct: 4   ILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           V+L+ + + +  L LV  Y+  
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDG 82

Length = 384

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 196 FKELIGKGGFGKV-----YKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN 250
            K  +G+G FGKV     Y    +   + +AVK +   +    K+F  E   +  L+H +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 251 LVQLHGYCRRKQELLLVYNYM 271
           +V+ +G C     L++V+ YM
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYM 89

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPI--AVKKI-SHDSEQWMKEFVSEIVSMGAL-RHRNL 251
           F+++IG+G FG+V K  +   GL +  A+K++  + S+   ++F  E+  +  L  H N+
Sbjct: 11  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 70

Query: 252 VQLHGYCRRKQELLLVYNY 270
           + L G C  +  L L   Y
Sbjct: 71  INLLGACEHRGYLYLAIEY 89

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW---MKEFVSEIVSMGALRHRNLV 252
             E+IG G    VY  +   +   +A+K+I  D E+    + E   E+ +M    H N+V
Sbjct: 5   LIEVIGVGATAVVYAAICLPNNEKVAIKRI--DLEKCQTSVDELRKEVQAMSQCNHPNVV 62

Query: 253 QLHGYCRRKQELLLVYNYM 271
           + +       EL LV  Y+
Sbjct: 63  KYYTSFVVGDELWLVMPYL 81

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR----HRNLV 252
            E+IG+G +GKVYK     +G  +A+K +    +   +E + E  ++  LR    H N+ 
Sbjct: 11  VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNI--LRKYSNHPNIA 66

Query: 253 QLHG 256
             +G
Sbjct: 67  TFYG 70

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 199 LIGKGGFGKVYKGVLSTSGLPIAVKK-----ISHDSEQWMKEFVS----EIVSMGALRHR 249
           LIG G FG VY G+ ++SG  +AVK+     +S  S+   +  +     EI  +  L+H 
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 250 NLVQLHG 256
           N+VQ  G
Sbjct: 67  NIVQYLG 73

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKIS-HDSEQWMKEF-VSEIVSMGALR---HRNLV 252
             IG+G +G VYK     +G  +A+KK+    SE+ +    + EI  +  L    H N+V
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 253 QL----HGYCR-RKQELLLVYNYMH 272
           +L    HG    R+ +L LV+ ++ 
Sbjct: 65  RLLDVCHGPRTDRELKLTLVFEHVD 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPI--AVKKI-SHDSEQWMKEFVSEIVSMGAL-RHRNL 251
           F+++IG+G FG+V + ++   GL +  A+K +    SE   ++F  E+  +  L  H N+
Sbjct: 6   FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI 65

Query: 252 VQLHGYCRRKQELLLVYNY 270
           + L G C  +  L +   Y
Sbjct: 66  INLLGACENRGYLYIAIEY 84

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
           +G G FGKVYK     +G+  A K I   SE+ +++++ EI  + +  H N+V+L
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 67

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD----SEQWMKEFVSEIVSMGALRHRNLVQLH 255
           IG G FG VY    S +   +AVKK+S+     +E+W ++ + E+  +  L+H N ++  
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKW-QDIIKEVKFLQQLKHPNTIEYK 87

Query: 256 GYCRRKQELLLVYNY 270
           G   ++    LV  Y
Sbjct: 88  GCYLKEHTAWLVMEY 102

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           +G G FGKVYK     +G   A K I   SE+ +++++ EI  +    H  +V+L G
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLG 76

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 200 IGKGGFGKVYKGVLSTSGLP--IAVKKI-SHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           IG G FGKV  G +++   P  + VK++    S Q   +F+ E     +L+H NL+Q  G
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62

Query: 257 YCRRKQELLLVYNY 270
            C      LLV  +
Sbjct: 63  QCTEVTPYLLVMEF 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 10/78 (12%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKIS----HD--SEQWMKEFVSEIVSMGALRHRNLVQ 253
           IG+G  G V+K     +G  +A+KK++          Q ++    EI ++ A +H  +V+
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALR----EIKALQACQHPYVVK 63

Query: 254 LHGYCRRKQELLLVYNYM 271
           L          +LV  YM
Sbjct: 64  LLDVFPHGSGFVLVMEYM 81

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVS---EIVSMGALRHRNLV 252
           +L+G+G FG+VY    + +G  +AVK++  D  S++  KE  +   EI  +  LRH  +V
Sbjct: 8   KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIV 67

Query: 253 QLHGYCRRKQE--LLLVYNYM 271
           Q +G  R  +E  L +   YM
Sbjct: 68  QYYGCLRDPEEKKLSIFVEYM 88

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%)

Query: 200 IGKGGFGKVYKG-VLSTSGLP----IAVKKISHDSEQW-MKEFVSEIVSMGALRHRNLVQ 253
           +G+G FGKV K       G      +AVK +  ++    +++ +SE   +  + H ++++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 254 LHGYCRRKQELLLVYNY 270
           L+G C +   LLL+  Y
Sbjct: 68  LYGACSQDGPLLLIVEY 84

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	274
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.85
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	99.8
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	99.73
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.68
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.63
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.62
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.57
KOG3653	534	consensus Transforming growth factor beta/activin	99.49
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.49
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.47
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.47
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.47
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.46
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	99.45
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.42
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.35
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.34
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.33
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.32
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.32
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.3
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.29
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.29
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.28
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.27
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.24
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.23
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.23
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.22
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.21
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.21
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.2
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.2
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.2
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.2
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.19
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.18
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.18
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.18
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.18
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.18
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.18
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.18
PHA02988	283	hypothetical protein; Provisional	99.17
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.17
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.17
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.16
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.16
KOG0605	550	consensus NDR and related serine/threonine kinases	99.15
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.15
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.14
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.14
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.14
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.13
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.13
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.13
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.13
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.13
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.13
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.12
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.12
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.11
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.11
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.11
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.1
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.1
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.1
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.1
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.1
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.1
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.1
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.09
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.09
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.09
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.09
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.08
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.08
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.08
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.08
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.08
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.08
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.08
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.07
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.07
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.07
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.06
PTZ00267	478	NIMA-related protein kinase; Provisional	99.06
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.06
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.06
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.06
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.06
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.05
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.05
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.05
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.05
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.05
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.05
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.05
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.05
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.04
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.04
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.04
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.04
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.04
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.04
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.04
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.04
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.04
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.04
KOG0586	596	consensus Serine/threonine protein kinase [General	99.04
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.04
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.04
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.04
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.04
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.04
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.03
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.03
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.03
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.03
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.03
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.03
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.03
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.03
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.03
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.03
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.03
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.02
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.02
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.02
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.02
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.02
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.02
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.02
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.01
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.01
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.01
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.01
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.01
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.01
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.01
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.99
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.99
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.99
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.99
KOG0198	313	consensus MEKK and related serine/threonine protei	98.99
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.99
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.99
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.99
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.99
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.99
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.99
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.99
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.99
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.98
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.98
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.98
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.98
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.98
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.98
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.98
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.98
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.98
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.98
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.97
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.96
KOG0578	550	consensus p21-activated serine/threonine protein k	98.96
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.96
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.96
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.95
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.95
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.95
KOG0610	459	consensus Putative serine/threonine protein kinase	98.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.94
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.94
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.94
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.94
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.93
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.93
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.93
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.93
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.93
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.93
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.92
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.92
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.92
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.92
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.92
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.92
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.92
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.92
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.92
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.92
PLN00009	294	cyclin-dependent kinase A; Provisional	98.91
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.91
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.91
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.91
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.9
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.9
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.9
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.9
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.9
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.89
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.89
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.89
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.89
PRK09188	365	serine/threonine protein kinase; Provisional	98.89
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.89
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.88
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.88
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.88
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.87
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.87
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.87
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.87
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.87
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.87
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.86
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.86
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.86
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.86
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.86
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.86
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.86
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.86
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.86
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.85
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.85
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.85
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.85
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.84
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.84
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.84
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.84
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.84
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.84
PTZ00036	440	glycogen synthase kinase; Provisional	98.83
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.83
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.83
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.82
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.82
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.82
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.82
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.82
PHA03212	391	serine/threonine kinase US3; Provisional	98.82
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.82
PTZ00283	496	serine/threonine protein kinase; Provisional	98.82
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.82
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.82
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.82
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.81
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.81
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.81
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.81
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.81
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.81
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.81
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.8
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.8
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.8
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.8
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.79
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.79
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.79
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.78
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.78
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.78
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.78
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.77
KOG0589	426	consensus Serine/threonine protein kinase [General	98.77
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.77
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.77
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.77
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.76
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.76
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.76
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.75
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.75
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.75
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.74
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.74
PHA03211	461	serine/threonine kinase US3; Provisional	98.74
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.73
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.73
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.73
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.72
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.72
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.72
PHA03209	357	serine/threonine kinase US3; Provisional	98.72
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.71
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.71
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.7
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.69
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.69
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.68
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.68
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.68
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.67
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.67
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.66
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.66
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.65
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.64
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.64
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.63
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.62
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.61
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.6
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.6
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.6
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.6
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.58
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.58
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.56
PHA03207	392	serine/threonine kinase US3; Provisional	98.52
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.52
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.51
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.49
PTZ00284	467	protein kinase; Provisional	98.47
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.45
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.44
PRK10345	210	hypothetical protein; Provisional	98.44
KOG0584	632	consensus Serine/threonine protein kinase [General	98.43
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.41
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.41
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.41
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.4
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.39
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.36
PHA03210	501	serine/threonine kinase US3; Provisional	98.34
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.34
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.29
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.27
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.25
PRK14879	211	serine/threonine protein kinase; Provisional	98.25
KOG1152	772	consensus Signal transduction serine/threonine kin	98.25
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.22
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.22
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.21
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.17
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.07
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.07
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.0
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.98
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.91
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.9
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	97.86
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.86
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.83
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.82
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.77
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.76
PHA02882	294	putative serine/threonine kinase; Provisional	97.75
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.68
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.64
smart00090	237	RIO RIO-like kinase.	97.64
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.59
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.58
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	97.57
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.47
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.41
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.39
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.32
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.28
PRK12274	218	serine/threonine protein kinase; Provisional	97.24
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.21
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	97.19
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.07
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.04
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.04
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	96.89
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.66
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.58
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.31
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.09
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	96.07
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.89
KOG3839	351	consensus Lectin VIP36, involved in the transport	95.56
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	94.89
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	94.58
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	94.5
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.31
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	94.14
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	93.95
KOG1243	690	consensus Protein kinase [General function predict	93.94
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	93.49
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	93.36
PF15065	350	NCU-G1: Lysosomal transcription factor, NCU-G1	93.05
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.64
PF15102	146	TMEM154: TMEM154 protein family	92.29
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	92.03
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	91.62
PLN02876	822	acyl-CoA dehydrogenase	90.85
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	90.85
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	89.28
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	89.13
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	88.38
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	88.16
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	86.47
PRK10593	297	hypothetical protein; Provisional	86.05
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	85.65
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	84.97
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	83.44
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	83.39
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	83.39
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	82.3
PF01636	239	APH: Phosphotransferase enzyme family This family	81.07
PF12877	684	DUF3827: Domain of unknown function (DUF3827); Int	80.76
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	80.7

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=4.7e-21  Score=172.70  Aligned_cols=94  Identities=52%  Similarity=0.844  Sum_probs=84.5

Q ss_pred             CCCccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeE
Q 045713          180 GPQRFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY  257 (274)
Q Consensus       180 ~~~~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~  257 (274)
                      ..+.|+|+||..||++|+  ++||+|+||.||+|.+.+ |..||||++.....+..++|.+|+.++++++|+|||+|+||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            457799999999999999  799999999999999986 58999999876643215679999999999999999999999


Q ss_pred             EEeCC-eEEEEEeccCCC
Q 045713          258 CRRKQ-ELLLVYNYMHNK  274 (274)
Q Consensus       258 ~~~~~-~~~LV~Ey~~~G  274 (274)
                      |.+.+ +.+||||||+||
T Consensus       140 C~e~~~~~~LVYEym~nG  157 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNG  157 (361)
T ss_pred             EecCCceEEEEEEccCCC
Confidence            99998 599999999998

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=99.80  E-value=1.3e-19  Score=154.25  Aligned_cols=90  Identities=54%  Similarity=0.870  Sum_probs=80.0

Q ss_pred             CccccceecCCCCeeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc
Q 045713            2 DSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL   81 (274)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~   81 (274)
                      .|..+.||+..    .++|.+|+.++|||+||+.+++|+|+|.+.+..+|..|+|+..+||+.+|+++|||||||+||..
T Consensus       146 ~S~~~~~~~~~----~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~  221 (236)
T cd06899         146 VSVKAGYWDDD----GGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLL  221 (236)
T ss_pred             ccceeeccccc----cccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCC
Confidence            35566666542    34488999999999999999999999998877789999999999999999999999999999999


Q ss_pred             ccceeEeccccccc
Q 045713           82 TSNQYILGWSFSRI   95 (274)
Q Consensus        82 ~~~~~i~~WsF~s~   95 (274)
                      .+.|+|++|+|+++
T Consensus       222 ~~~h~i~sWsF~s~  235 (236)
T cd06899         222 TELHYILSWSFSSN  235 (236)
T ss_pred             cceEEEEEEEEEcC
Confidence            99999999999874

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=99.73  E-value=4.5e-18  Score=145.01  Aligned_cols=78  Identities=45%  Similarity=0.676  Sum_probs=71.0

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEeccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFS   93 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~   93 (274)
                      ....+|.+|+.++|||+||+.+++|+|+|.... .+|..|+++..+||+.+|+++||||||||||...+.|.|++|+|+
T Consensus       159 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~l~~~vdL~~~l~~~v~vGFsasTG~~~~~h~I~sW~F~  236 (236)
T PF00139_consen  159 SPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS-SKPSSPVLSVNVDLSAVLPEQVYVGFSASTGGSYQTHDILSWSFS  236 (236)
T ss_dssp             EEEHHHGTTSEEEEEEEEETTTTEEEEEEEETT-TTSEEEEEEEE--HHHHSCSEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred             cccccccCCcEEEEEEEEcCCccEEEEEEeccc-CCCcceeEEEEEchHHhcCCCcEEEEEeecCCCcceEEEEEEEeC
Confidence            357789999999999999999999999999874 588889999999999999999999999999999999999999995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.68  E-value=5.1e-17  Score=152.73  Aligned_cols=92  Identities=30%  Similarity=0.640  Sum_probs=81.8

Q ss_pred             ccChhhHHHhhcCcc-----------ceeeeccCceEEEEEEcCCC---ceEEEEEEccC-CHHhHHHHHHHHHHhcCCC
Q 045713          183 RFSYKDLYKATKGFK-----------ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALR  247 (274)
Q Consensus       183 ~~~~~el~~at~~f~-----------~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~  247 (274)
                      .++|+|...|-..|.           ++||.|.||.|++|.++..|   ..||||.|+.. ....+++|+.|..+|+++.
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            478888888777763           58999999999999996544   67999999987 5566889999999999999


Q ss_pred             CCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          248 HRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       248 H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||||++|.|+.....+.|||.|||+||
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENG  715 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENG  715 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCC
Confidence            999999999999999999999999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.63  E-value=2.2e-16  Score=150.02  Aligned_cols=86  Identities=31%  Similarity=0.540  Sum_probs=73.4

Q ss_pred             HHHhhcCccceeeeccCceEEEEEEcC-----CCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC
Q 045713          189 LYKATKGFKELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ  262 (274)
Q Consensus       189 l~~at~~f~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~  262 (274)
                      +.+....|.+.||+|+||+||+|...+     ..+.||||.++... .+.+++|.+|+++|.+++|+|||+|+|+|.+++
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            333333455789999999999998742     23679999999874 447899999999999999999999999999999


Q ss_pred             eEEEEEeccCCC
Q 045713          263 ELLLVYNYMHNK  274 (274)
Q Consensus       263 ~~~LV~Ey~~~G  274 (274)
                      ++++|+|||.+|
T Consensus       563 P~~MvFEYm~~G  574 (774)
T KOG1026|consen  563 PLCMVFEYMDHG  574 (774)
T ss_pred             eeEEEEEecccc
Confidence            999999999987

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.62  E-value=3.7e-16  Score=143.00  Aligned_cols=86  Identities=33%  Similarity=0.553  Sum_probs=75.0

Q ss_pred             hHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEE
Q 045713          188 DLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       188 el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~L  266 (274)
                      |..+...-|.+.||+|.||.|..+.... +..||||.++.+. ...+.+|.+|+++|.+|+|||||+|+|+|..++++++
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence            3333333455899999999999999974 6999999999874 4557899999999999999999999999999999999


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      |+|||+||
T Consensus       613 I~EYmEnG  620 (807)
T KOG1094|consen  613 ITEYMENG  620 (807)
T ss_pred             HHHHHhcC
Confidence            99999998

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.57  E-value=8.1e-15  Score=129.33  Aligned_cols=77  Identities=31%  Similarity=0.499  Sum_probs=70.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|.||.||+|.++..+..||||.+...  .....+-...|+.+|++++|+|||+|+.++..++.++||||||.+|
T Consensus        16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gG   94 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGG   94 (429)
T ss_pred             hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCC
Confidence            5699999999999999988999999999765  4555667899999999999999999999999999999999999987

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.49  E-value=2.8e-14  Score=127.99  Aligned_cols=74  Identities=32%  Similarity=0.472  Sum_probs=62.9

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhc--CCCCCCccceeeEEEeCC----eEEEEEe
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMG--ALRHRNLVQLHGYCRRKQ----ELLLVYN  269 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~--~l~H~Nlv~l~g~~~~~~----~~~LV~E  269 (274)
                      +.+++|+|+||.||||.+.  ++.||||++..   +..+.|++|-.+..  .|+|+||++++|.-....    +.+||+|
T Consensus       214 l~eli~~Grfg~V~KaqL~--~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLD--NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             hHHHhhcCccceeehhhcc--CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            3488999999999999997  58999999954   44667888877755  579999999999987665    8899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |.++|
T Consensus       289 fh~kG  293 (534)
T KOG3653|consen  289 FHPKG  293 (534)
T ss_pred             eccCC
Confidence            99987

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.49  E-value=7.8e-14  Score=125.55  Aligned_cols=75  Identities=40%  Similarity=0.640  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCce-EEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-eEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLP-IAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-ELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~-vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-~~~LV~Ey~~~  273 (274)
                      +.+|+|+||+||+|.++  |.. ||||++....  ....++|.+|+.+|.+++|||||+|+|.|.+.. .++||+|||++
T Consensus        47 ~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            55999999999999998  566 9999998652  223679999999999999999999999999887 79999999999


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       125 G  125 (362)
T KOG0192|consen  125 G  125 (362)
T ss_pred             C
Confidence            8

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.47  E-value=8.7e-14  Score=127.79  Aligned_cols=78  Identities=32%  Similarity=0.563  Sum_probs=69.2

Q ss_pred             cceeeeccCceEEEEEEcCCC----ceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g----~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      ..+||+|+||.||+|.+...+    ..||||..+..   ......+|++|.++|..++|+|||+|+|++....+++||||
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE  241 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME  241 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence            378999999999999986432    23899999852   46778999999999999999999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      +|.||
T Consensus       242 l~~gG  246 (474)
T KOG0194|consen  242 LCNGG  246 (474)
T ss_pred             ecCCC
Confidence            99998

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.47  E-value=4.2e-14  Score=128.43  Aligned_cols=76  Identities=33%  Similarity=0.550  Sum_probs=68.0

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|.||.|+.|.+++ ...||+|.++... ...++|.+|+.+|.+|+|+|||+|+|+|..+++++||+|||++|
T Consensus       211 ~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHhcCCccceEEEEEEcC-CCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            4689999999999999974 4689999998752 23568999999999999999999999999999999999999998

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.47  E-value=1.2e-13  Score=135.67  Aligned_cols=83  Identities=33%  Similarity=0.571  Sum_probs=72.3

Q ss_pred             hhcCccceeeeccCceEEEEEEcCCC-----ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEE
Q 045713          192 ATKGFKELIGKGGFGKVYKGVLSTSG-----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELL  265 (274)
Q Consensus       192 at~~f~~~lG~G~fG~Vy~g~~~~~g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~  265 (274)
                      ..-.+.+.||+|.||.||+|.+.+..     ..||||.++.. +.+...+|+.|..+|++++|||||+|+|.|...+..+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            33344578999999999999986432     35999999876 6777889999999999999999999999999999999


Q ss_pred             EEEeccCCC
Q 045713          266 LVYNYMHNK  274 (274)
Q Consensus       266 LV~Ey~~~G  274 (274)
                      |++|||++|
T Consensus       772 i~leyM~gG  780 (1025)
T KOG1095|consen  772 ILLEYMEGG  780 (1025)
T ss_pred             EEehhcccC
Confidence            999999987

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.46  E-value=2.8e-13  Score=137.14  Aligned_cols=86  Identities=33%  Similarity=0.558  Sum_probs=68.9

Q ss_pred             cChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe
Q 045713          184 FSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE  263 (274)
Q Consensus       184 ~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~  263 (274)
                      ++++++..... ..++||+|+||.||+|.....+..||||++......    ...|+..|.+++|||||+++|+|...+.
T Consensus       683 ~~~~~~~~~~~-~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~  757 (968)
T PLN00113        683 ITINDILSSLK-EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKG  757 (968)
T ss_pred             hhHHHHHhhCC-cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCC
Confidence            45555544322 227899999999999998777899999998654221    2345788999999999999999999999


Q ss_pred             EEEEEeccCCC
Q 045713          264 LLLVYNYMHNK  274 (274)
Q Consensus       264 ~~LV~Ey~~~G  274 (274)
                      .++|||||++|
T Consensus       758 ~~lv~Ey~~~g  768 (968)
T PLN00113        758 AYLIHEYIEGK  768 (968)
T ss_pred             CEEEEeCCCCC
Confidence            99999999986

>cd01951 lectin_L-type legume lectins

Probab=99.45  E-value=1.6e-13  Score=116.17  Aligned_cols=70  Identities=34%  Similarity=0.448  Sum_probs=64.8

Q ss_pred             CCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           23 GNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        23 g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      |+.++|||+||+.+++|+|+|.+...  |..|.++.++||+..++++|||||+||||...+.|.|++|+|..
T Consensus       154 g~~~~v~I~Y~~~~~~L~v~l~~~~~--~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~wsf~~  223 (223)
T cd01951         154 GNEHTVRITYDPTTNTLTVYLDNGST--LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSFTS  223 (223)
T ss_pred             CCEEEEEEEEeCCCCEEEEEECCCCc--cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEEecC
Confidence            89999999999999999999986543  67789999999999999999999999999999999999999963

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.42  E-value=8.3e-14  Score=128.70  Aligned_cols=77  Identities=34%  Similarity=0.631  Sum_probs=71.3

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .++||-|.+|.||.|.++.-...||||.|+.+.. ..++|+.|..+|..++|||||+|+|+|....++|||.|||.+|
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG  348 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG  348 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence            4789999999999999987789999999987644 3789999999999999999999999999999999999999987

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=1.6e-12  Score=115.09  Aligned_cols=77  Identities=22%  Similarity=0.400  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-----H--HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-----E--QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-----~--~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.|-.|.-+.+|..||||+++...     .  .......+|+++|.+|+|||||++.+++...+..|+||||
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~  257 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEY  257 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEE
Confidence            78999999999999998899999999997541     1  1123457999999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |++|
T Consensus       258 v~GG  261 (475)
T KOG0615|consen  258 VEGG  261 (475)
T ss_pred             ecCc
Confidence            9987

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.34  E-value=3.3e-13  Score=128.05  Aligned_cols=76  Identities=36%  Similarity=0.599  Sum_probs=66.0

Q ss_pred             ceeeeccCceEEEEEEcCCC----ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+||+|+||+||||.+-..|    .+||+|.+... +.+...+++.|+..|.+++|+||++|+|+|.... +.||.+|||
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP  780 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMP  780 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcc
Confidence            68999999999999873334    67999999765 5566789999999999999999999999998655 899999999


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      .|
T Consensus       781 ~G  782 (1177)
T KOG1025|consen  781 LG  782 (1177)
T ss_pred             cc
Confidence            87

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=2.1e-12  Score=116.84  Aligned_cols=76  Identities=33%  Similarity=0.555  Sum_probs=67.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~  273 (274)
                      +.||+|.||.||++.....|..||+|++..+.  ........+||.+|.+|+||||++|.+...+.  +.+|||+|||++
T Consensus       123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh  202 (560)
T KOG0600|consen  123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH  202 (560)
T ss_pred             HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc
Confidence            67999999999999998889999999998653  34456678999999999999999999998776  789999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.32  E-value=9.7e-13  Score=112.50  Aligned_cols=76  Identities=33%  Similarity=0.473  Sum_probs=68.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      .++|+|++|.|||+..++.|+.||||++...  +..-.+--++|+.+|.+++|+|||.|+-+|.....++||+|||++
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh   85 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH   85 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence            4689999999999999999999999999754  345567789999999999999999999999999999999999863

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.32  E-value=4.8e-12  Score=116.82  Aligned_cols=77  Identities=25%  Similarity=0.456  Sum_probs=70.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+|.+||++.....|..+|+|++...   ....++...+|+++.++|+|||||++++++++.+.+|||+|+|++|
T Consensus        24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~  103 (592)
T KOG0575|consen   24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRG  103 (592)
T ss_pred             eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCc
Confidence            7899999999999999778999999999764   3445677899999999999999999999999999999999999986

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=3.7e-12  Score=113.74  Aligned_cols=72  Identities=32%  Similarity=0.534  Sum_probs=61.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC--CCCCCccceeeEEEeCC----eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA--LRHRNLVQLHGYCRRKQ----ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~Nlv~l~g~~~~~~----~~~LV~Ey~  271 (274)
                      +.||+|.||.||+|.++  |..||||++...+   .+.+.+|.++.+.  |||+||+.+++.-....    ++|||.||.
T Consensus       217 e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH  291 (513)
T KOG2052|consen  217 EIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH  291 (513)
T ss_pred             EEecCccccceeecccc--CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence            78999999999999998  7899999996543   4567888888775  59999999999865543    689999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       292 e~G  294 (513)
T KOG2052|consen  292 EHG  294 (513)
T ss_pred             cCC
Confidence            998

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=1.3e-12  Score=108.26  Aligned_cols=77  Identities=29%  Similarity=0.446  Sum_probs=69.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|.||.||.|..+.++..||+|.+...   ..+..+++.+|+++-+.|+||||++++||+.+....||++||.++|
T Consensus        28 r~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~g  107 (281)
T KOG0580|consen   28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRG  107 (281)
T ss_pred             ccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCc
Confidence            7899999999999999988999999999654   2334568899999999999999999999999999999999999887

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.29  E-value=9.9e-12  Score=107.27  Aligned_cols=79  Identities=29%  Similarity=0.668  Sum_probs=68.2

Q ss_pred             ccceeeeccCceEEEEEEc---CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          196 FKELIGKGGFGKVYKGVLS---TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.+.||+|+||.||+|.+.   ..+..||+|.++.. +......|.+|+.++.+++|+||+++.|++...+..+|||||+
T Consensus         9 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   88 (266)
T cd05064           9 IERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYM   88 (266)
T ss_pred             EeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeC
Confidence            3478999999999999864   33578999999865 3444578999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        89 ~~~   91 (266)
T cd05064          89 SNG   91 (266)
T ss_pred             CCC
Confidence            876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.28  E-value=1.6e-11  Score=105.92  Aligned_cols=86  Identities=22%  Similarity=0.311  Sum_probs=75.5

Q ss_pred             HHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEE
Q 045713          189 LYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       189 l~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~L  266 (274)
                      ++.++.++.  ..||+|+||.||+|....++..|++|.+........+.+.+|+.++.+++|+||++++|+|...+..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            444566665  689999999999999887788999999987666667789999999999999999999999999999999


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      ++||+++|
T Consensus        83 v~e~~~~~   90 (268)
T cd06624          83 FMEQVPGG   90 (268)
T ss_pred             EEecCCCC
Confidence            99999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.27  E-value=1.6e-11  Score=105.82  Aligned_cols=78  Identities=38%  Similarity=0.661  Sum_probs=65.7

Q ss_pred             cceeeeccCceEEEEEEc----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          197 KELIGKGGFGKVYKGVLS----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .+.||+|.||.||+|.+.    ..+..|+||.++.. .....++|.+|+..+.+++|+||++++|+|...++.++|+||+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            368999999999999987    33578999999664 4455789999999999999999999999999888899999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        84 ~~g   86 (259)
T PF07714_consen   84 PGG   86 (259)
T ss_dssp             TTE
T ss_pred             ccc
Confidence            875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.24  E-value=8.5e-12  Score=104.98  Aligned_cols=75  Identities=31%  Similarity=0.522  Sum_probs=67.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.+|+|.||.||+|....+|+.||||+++...  ..-...-++|+..|++++|+||+.|+.++-..+.+-||+|||+
T Consensus         8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~   84 (318)
T KOG0659|consen    8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP   84 (318)
T ss_pred             hhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc
Confidence            67999999999999998889999999998652  2224567999999999999999999999999999999999997

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.23  E-value=4.4e-11  Score=104.76  Aligned_cols=87  Identities=23%  Similarity=0.314  Sum_probs=76.5

Q ss_pred             ccChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC
Q 045713          183 RFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK  261 (274)
Q Consensus       183 ~~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~  261 (274)
                      .++..||...     ..||+|..|.|||+.++.++..+|.|.+... ....+++..+|++++.+.+||+||.++|.|...
T Consensus        75 ~i~~~dle~~-----~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~  149 (364)
T KOG0581|consen   75 GISLSDLERL-----GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN  149 (364)
T ss_pred             ccCHHHhhhh-----hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC
Confidence            3556666543     6799999999999999999999999999655 556678999999999999999999999999998


Q ss_pred             C-eEEEEEeccCCC
Q 045713          262 Q-ELLLVYNYMHNK  274 (274)
Q Consensus       262 ~-~~~LV~Ey~~~G  274 (274)
                      + ++.|+||||.+|
T Consensus       150 ~~~isI~mEYMDgG  163 (364)
T KOG0581|consen  150 GEEISICMEYMDGG  163 (364)
T ss_pred             CceEEeehhhcCCC
Confidence            8 599999999987

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.23  E-value=4.7e-11  Score=108.74  Aligned_cols=77  Identities=18%  Similarity=0.256  Sum_probs=69.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+.+|+.++.+++|+||+++++++...+.++|||||+++|
T Consensus         7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg   86 (381)
T cd05626           7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG   86 (381)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence            7899999999999999888899999999753   2334567899999999999999999999999999999999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.22  E-value=3.3e-11  Score=110.62  Aligned_cols=77  Identities=27%  Similarity=0.466  Sum_probs=65.9

Q ss_pred             ceeeeccCceEEEEEEcCC-----CceEEEEEEccC-CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTS-----GLPIAVKKISHD-SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||+|.....     +..||||++... .....+.|.+|+.++.+++ ||||++++|+|...+.++|||||
T Consensus        43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey  122 (400)
T cd05105          43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY  122 (400)
T ss_pred             heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEe
Confidence            7899999999999986322     346999999754 3344568999999999996 99999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |++|
T Consensus       123 ~~~g  126 (400)
T cd05105         123 CFYG  126 (400)
T ss_pred             cCCC
Confidence            9886

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.21  E-value=8.8e-12  Score=114.39  Aligned_cols=76  Identities=30%  Similarity=0.497  Sum_probs=69.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|.||.||||+-+.+...||+|.+...  .....+...+|++++.+++|||||.++.|++...++|+|.||+.+
T Consensus         8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g   85 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG   85 (808)
T ss_pred             HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence            7899999999999999888899999999765  344567799999999999999999999999999999999999854

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.21  E-value=2e-11  Score=113.24  Aligned_cols=79  Identities=32%  Similarity=0.563  Sum_probs=66.9

Q ss_pred             CccceeeeccCceEEEEEEcCC----CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          195 GFKELIGKGGFGKVYKGVLSTS----GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       195 ~f~~~lG~G~fG~Vy~g~~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      ...++||+|.||.||+|.+.+.    ...||||..+.+ .....+.|++|..+|..++||||++|+|.|. ..+.|||||
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~WivmE  470 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPMWIVME  470 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccceeEEEe
Confidence            3347899999999999997432    356899999876 4555778999999999999999999999996 567899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      +++.|
T Consensus       471 L~~~G  475 (974)
T KOG4257|consen  471 LAPLG  475 (974)
T ss_pred             cccch
Confidence            99876

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.20  E-value=3.3e-11  Score=104.63  Aligned_cols=76  Identities=22%  Similarity=0.423  Sum_probs=64.5

Q ss_pred             eeeeccCceEEEEEEcCC------------------------CceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccce
Q 045713          199 LIGKGGFGKVYKGVLSTS------------------------GLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQL  254 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~~------------------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l  254 (274)
                      .||+|+||.||+|.+...                        ...|++|.+.........+|..|+.++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            589999999999986311                        14589999876544556789999999999999999999


Q ss_pred             eeEEEeCCeEEEEEeccCCC
Q 045713          255 HGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       255 ~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +|+|......+|||||+++|
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g  101 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHG  101 (274)
T ss_pred             EEEEEeCCceEEEEecCCCC
Confidence            99999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.20  E-value=6.8e-11  Score=104.01  Aligned_cols=78  Identities=29%  Similarity=0.524  Sum_probs=66.8

Q ss_pred             cceeeeccCceEEEEEEcC----------------CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEE
Q 045713          197 KELIGKGGFGKVYKGVLST----------------SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCR  259 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~----------------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~  259 (274)
                      .+.||+|+||.||++...+                .+..||+|.+... ......+|.+|+.++.+++|+||++++|+|.
T Consensus        10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   89 (304)
T cd05096          10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV   89 (304)
T ss_pred             eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence            3789999999999997632                2347999999765 3445678999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCC
Q 045713          260 RKQELLLVYNYMHNK  274 (274)
Q Consensus       260 ~~~~~~LV~Ey~~~G  274 (274)
                      ..+..+|||||+++|
T Consensus        90 ~~~~~~lv~e~~~~~  104 (304)
T cd05096          90 DEDPLCMITEYMENG  104 (304)
T ss_pred             cCCceEEEEecCCCC
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=7.6e-11  Score=106.45  Aligned_cols=77  Identities=21%  Similarity=0.291  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+...   .......+.+|+.+|.+++|+||+++++++...+..+|||||+++|
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g   86 (364)
T cd05599           7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGG   86 (364)
T ss_pred             EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCc
Confidence            7899999999999999888899999999753   2234556889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.20  E-value=7e-11  Score=106.41  Aligned_cols=77  Identities=25%  Similarity=0.394  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..||+|.+... .......+.+|+.++.+++|+||+++++++...+.+++||||+++|
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  157 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG  157 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence            6799999999999998877899999999654 3344678999999999999999999999999999999999999876

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=9.1e-11  Score=106.62  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..+|||||+++|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg   86 (377)
T cd05629           7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGG   86 (377)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCC
Confidence            7899999999999998888899999998653   2234567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.18  E-value=4e-11  Score=109.11  Aligned_cols=78  Identities=27%  Similarity=0.422  Sum_probs=66.5

Q ss_pred             cceeeeccCceEEEEEE-----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~-----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      .+.||+|+||.||++..     .+.+..||||.++.. .....+.+.+|+.++..+ +|+||++++|+|...+..++|||
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E  119 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE  119 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence            48999999999999974     233568999999754 234456789999999999 89999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus       120 ~~~~g  124 (375)
T cd05104         120 YCCYG  124 (375)
T ss_pred             hccCC
Confidence            99986

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.18  E-value=1.1e-10  Score=103.94  Aligned_cols=77  Identities=25%  Similarity=0.327  Sum_probs=67.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||.||++.....|..+|+|.++..   .......+.+|+.++.+++|+||+++.+++...+.++|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999999888899999999754   2334567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.18  E-value=1.1e-10  Score=106.22  Aligned_cols=77  Identities=18%  Similarity=0.236  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+.+|+.++.+++|+||+++++.+...+.++||||||++|
T Consensus         7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (382)
T cd05625           7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG   86 (382)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCC
Confidence            7899999999999998878899999999753   2334567889999999999999999999999999999999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.18  E-value=1e-10  Score=104.12  Aligned_cols=77  Identities=26%  Similarity=0.331  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.++..   .......+.+|+.++.+++|+||+++.+++...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3699999999999998878899999999754   2334567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=1.2e-10  Score=103.97  Aligned_cols=77  Identities=19%  Similarity=0.341  Sum_probs=68.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.++..   .....+.+.+|+.++..++|+||+++++++...+..+|||||+++|
T Consensus         7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~   86 (333)
T cd05600           7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGG   86 (333)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCC
Confidence            7899999999999999877899999999754   2234567899999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.18  E-value=1e-10  Score=104.42  Aligned_cols=77  Identities=17%  Similarity=0.276  Sum_probs=68.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  103 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGG  103 (329)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCC
Confidence            7899999999999999888899999999753   2234567899999999999999999999999999999999999876

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.18  E-value=1.1e-10  Score=104.42  Aligned_cols=77  Identities=21%  Similarity=0.249  Sum_probs=69.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+... .......+.+|+.++.+++|+||++++++|...+..+|||||+++|
T Consensus        11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   88 (333)
T cd06650          11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   88 (333)
T ss_pred             ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCC
Confidence            7899999999999999878899999998765 3344567999999999999999999999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA02988 hypothetical protein; Provisional

Probab=99.17  E-value=1.1e-10  Score=102.06  Aligned_cols=88  Identities=17%  Similarity=0.307  Sum_probs=70.7

Q ss_pred             CccChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCCH---HhHHHHHHHHHHhcCCCCCCccceeeEE
Q 045713          182 QRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---QWMKEFVSEIVSMGALRHRNLVQLHGYC  258 (274)
Q Consensus       182 ~~~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~Nlv~l~g~~  258 (274)
                      +.++++|+...+   ...+|+|++|.||+|.+.  |..||||.++....   ...+.|.+|+.+|.+++|+||++++|+|
T Consensus        13 ~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~   87 (283)
T PHA02988         13 KCIESDDIDKYT---SVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI   87 (283)
T ss_pred             eecCHHHcCCCC---CeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence            455666663332   157999999999999985  78999999976422   2256788999999999999999999999


Q ss_pred             Ee----CCeEEEEEeccCCC
Q 045713          259 RR----KQELLLVYNYMHNK  274 (274)
Q Consensus       259 ~~----~~~~~LV~Ey~~~G  274 (274)
                      ..    ...+++||||+++|
T Consensus        88 ~~~~~~~~~~~lv~Ey~~~g  107 (283)
T PHA02988         88 IDIVDDLPRLSLILEYCTRG  107 (283)
T ss_pred             EecccCCCceEEEEEeCCCC
Confidence            77    34689999999986

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.17  E-value=1.5e-10  Score=103.39  Aligned_cols=77  Identities=27%  Similarity=0.352  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+.+|+.++.+++|+||+++.+++...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999998878899999999754   2344567899999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.17  E-value=1.7e-10  Score=102.94  Aligned_cols=77  Identities=21%  Similarity=0.217  Sum_probs=69.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+... .......+.+|+.+|.+++|+||++++++|...+..++||||+++|
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   88 (331)
T cd06649          11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   88 (331)
T ss_pred             EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCC
Confidence            6899999999999999888899999999765 3444678999999999999999999999999999999999999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.16  E-value=1.1e-10  Score=99.57  Aligned_cols=77  Identities=31%  Similarity=0.586  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..+|+|.+... .......|.+|+.++.+++|+||++++++|...+..+||+||+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            3689999999999999877899999988654 3445678999999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.16  E-value=1.3e-10  Score=101.32  Aligned_cols=77  Identities=26%  Similarity=0.335  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..+|+|.+....   ......+.+|+.++.+++|+|++++.+++...+..++|+|||++|
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g   85 (285)
T cd05631           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGG   85 (285)
T ss_pred             EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCC
Confidence            78999999999999988788999999986542   233456889999999999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.15  E-value=9.3e-11  Score=107.01  Aligned_cols=81  Identities=22%  Similarity=0.325  Sum_probs=72.6

Q ss_pred             cCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEE
Q 045713          194 KGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       194 ~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      .+|.  .+||+|+||.||.++-++.|..+|+|+|+..   .....+...+|-.+|....+++||+|+-.+.+.+.+||||
T Consensus       141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM  220 (550)
T KOG0605|consen  141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM  220 (550)
T ss_pred             ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence            3455  7899999999999999999999999999876   3445667889999999999999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+|+|
T Consensus       221 EylPGG  226 (550)
T KOG0605|consen  221 EYLPGG  226 (550)
T ss_pred             EecCCc
Confidence            999998

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1.3e-10  Score=102.87  Aligned_cols=75  Identities=24%  Similarity=0.305  Sum_probs=66.6

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....+..+|+|.+...   .......+.+|+.++.+++|+||+++.++|...+..++||||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   78 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG   78 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence            69999999999999888899999999753   2344567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.14  E-value=1.4e-10  Score=101.01  Aligned_cols=77  Identities=26%  Similarity=0.486  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|++...  .....+.+.+|+.++.+++|+||+++.++|...+..++||||+++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   85 (287)
T cd07848           7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN   85 (287)
T ss_pred             EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCC
Confidence            7899999999999999888899999999754  2333567889999999999999999999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.14  E-value=2.1e-10  Score=104.19  Aligned_cols=77  Identities=19%  Similarity=0.229  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+....   ......+.+|+.+|.+++|+||+++++.+...+.++|||||+++|
T Consensus         7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g   86 (376)
T cd05598           7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG   86 (376)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCC
Confidence            78999999999999988888999999996431   223466889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.14  E-value=1.1e-10  Score=107.27  Aligned_cols=77  Identities=26%  Similarity=0.464  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++...+     .+..||+|.++.. .....+.+++|+.+|.++. |+||++++|+|...+..++|+||
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~  122 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEY  122 (401)
T ss_pred             hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEec
Confidence            789999999999998642     2468999999765 2333557999999999997 99999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       123 ~~~g  126 (401)
T cd05107         123 CRYG  126 (401)
T ss_pred             cCCC
Confidence            9986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.13  E-value=2.9e-10  Score=100.43  Aligned_cols=77  Identities=21%  Similarity=0.225  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+... ......++.+|+.++.+++|+||++++++|...+..+||+||+++|
T Consensus         7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~   84 (308)
T cd06615           7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   84 (308)
T ss_pred             eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence            7899999999999998877889999998755 3444567899999999999999999999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.13  E-value=2.5e-10  Score=103.28  Aligned_cols=77  Identities=18%  Similarity=0.248  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.++..   .......+.+|+.++.+++|+||+++++.+.....++||||||++|
T Consensus         7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (363)
T cd05628           7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGG   86 (363)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCC
Confidence            7899999999999998878899999999753   2233456888999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.13  E-value=3.7e-10  Score=98.08  Aligned_cols=77  Identities=22%  Similarity=0.302  Sum_probs=69.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||.||++.....+..+|+|.+... .....++|.+|+.++.+++|+|+++++++|...+..++|+||+++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   84 (279)
T cd06619           7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGG   84 (279)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCC
Confidence            7899999999999998777899999998755 3445678999999999999999999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=2.2e-10  Score=99.95  Aligned_cols=77  Identities=26%  Similarity=0.340  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||.||++.....+..||+|.+....   ......+.+|+.++.+++|+||+++.+++..++.+++||||+++|
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   85 (285)
T cd05605           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG   85 (285)
T ss_pred             EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCC
Confidence            68999999999999987778999999997542   223456789999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.13  E-value=2.8e-10  Score=101.27  Aligned_cols=77  Identities=25%  Similarity=0.320  Sum_probs=67.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+..|+.++.+++|+||+++.+++...+.++|||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999998877899999999754   2334567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.13  E-value=1.6e-10  Score=104.99  Aligned_cols=77  Identities=27%  Similarity=0.260  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+..|+.++..++|+||+++++++...+.++|||||+++|
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg  128 (370)
T cd05596          49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGG  128 (370)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCC
Confidence            7899999999999999888899999999643   2233456789999999999999999999999999999999999886

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=1.4e-10  Score=101.60  Aligned_cols=77  Identities=17%  Similarity=0.174  Sum_probs=67.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~   86 (291)
T cd05612           7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGG   86 (291)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCC
Confidence            7899999999999999877899999999643   2233567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.12  E-value=2.8e-10  Score=102.20  Aligned_cols=78  Identities=22%  Similarity=0.380  Sum_probs=66.6

Q ss_pred             cceeeeccCceEEEEEEcCCC-ceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSG-LPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g-~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||++.....+ ..||+|.+...   .......+.+|+.++..++||||+++++++...+..+|||||++
T Consensus        35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~  114 (340)
T PTZ00426         35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVI  114 (340)
T ss_pred             EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC
Confidence            378999999999999875443 68999998643   22345678899999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       115 ~g  116 (340)
T PTZ00426        115 GG  116 (340)
T ss_pred             CC
Confidence            76

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.11  E-value=2.4e-10  Score=103.79  Aligned_cols=77  Identities=26%  Similarity=0.224  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+..|+.++..++|+||+++++++...+.+++||||+++|
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg  128 (370)
T cd05621          49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG  128 (370)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCC
Confidence            7899999999999999888899999998642   2233456889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.11  E-value=1.9e-10  Score=100.07  Aligned_cols=77  Identities=19%  Similarity=0.232  Sum_probs=69.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+... .....+.+.+|+.++..++|+||+++++.|...+..+|||||+++|
T Consensus        11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (284)
T cd06620          11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCG   88 (284)
T ss_pred             HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCC
Confidence            6899999999999998877899999988754 3445678999999999999999999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.11  E-value=3.6e-10  Score=100.89  Aligned_cols=77  Identities=22%  Similarity=0.326  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..+|+|.++..   .......+..|..++.++ +|+||+++.++|...+.++|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3699999999999999888899999999754   223456688999999888 799999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (329)
T cd05588          81 G   81 (329)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.10  E-value=2.8e-10  Score=98.19  Aligned_cols=76  Identities=32%  Similarity=0.448  Sum_probs=64.9

Q ss_pred             eeeeccCceEEEEEEcC--CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVLST--SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||+|...+  .+..+|+|.++.. .......|.+|+.++.+++|+|+++++|+|......++||||+++|
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            58999999999998753  2357999998765 3344567999999999999999999999999989999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.10  E-value=1.5e-10  Score=101.34  Aligned_cols=77  Identities=25%  Similarity=0.418  Sum_probs=70.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||+||..+.++.++.+|+|.++..   .....+...+|..+|.+++||.||+|.-.+...+.+|||+||+.+|
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GG  110 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGG  110 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCc
Confidence            8999999999999999888999999999865   2344667889999999999999999999999999999999999998

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.10  E-value=5e-10  Score=96.35  Aligned_cols=77  Identities=25%  Similarity=0.360  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||+|....++..+|+|.+..........+.+|+.++.+++|+||+++.++|...+..++|+||+++|
T Consensus        15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~   91 (267)
T cd06646          15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGG   91 (267)
T ss_pred             heeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCC
Confidence            78999999999999987778999999997654444567889999999999999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.10  E-value=1.6e-10  Score=103.20  Aligned_cols=78  Identities=26%  Similarity=0.444  Sum_probs=64.3

Q ss_pred             cceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCC-eEEEEE
Q 045713          197 KELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQ-ELLLVY  268 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~-~~~LV~  268 (274)
                      .+.||+|+||.||++...     ..+..||+|.+... .....+.+.+|+.++.++ +|+||++++|+|...+ .++++|
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~   91 (338)
T cd05102          12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV   91 (338)
T ss_pred             eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence            378999999999999752     23467999999754 334456799999999999 8999999999987654 589999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus        92 ey~~~g   97 (338)
T cd05102          92 EFCKYG   97 (338)
T ss_pred             ecCCCC
Confidence            999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.10  E-value=4e-10  Score=97.02  Aligned_cols=78  Identities=28%  Similarity=0.611  Sum_probs=67.3

Q ss_pred             cceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|.....   ...||+|.++.. ......+|.+|+.++.+++|+||+++.+++...+..+++|||++
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   88 (266)
T cd05033           9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME   88 (266)
T ss_pred             eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCC
Confidence            37899999999999988533   357999998755 34456789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        89 ~~   90 (266)
T cd05033          89 NG   90 (266)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.10  E-value=5e-10  Score=100.01  Aligned_cols=77  Identities=22%  Similarity=0.337  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.++..   .......+..|+.++.++ +|+||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            3699999999999999888899999999754   233455678899888776 899999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (329)
T cd05618          81 G   81 (329)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.10  E-value=3.5e-10  Score=102.77  Aligned_cols=89  Identities=24%  Similarity=0.241  Sum_probs=73.9

Q ss_pred             hhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          186 YKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       186 ~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      ++++.....+|.  +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++..++|+||+++++++..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            344444455555  7899999999999999888899999998642   22334568889999999999999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      .+.+++||||+++|
T Consensus       115 ~~~~~lv~Ey~~gg  128 (371)
T cd05622         115 DRYLYMVMEYMPGG  128 (371)
T ss_pred             CCEEEEEEcCCCCC
Confidence            99999999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.09  E-value=2.9e-10  Score=98.96  Aligned_cols=75  Identities=27%  Similarity=0.369  Sum_probs=65.4

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....+..+|+|.+....   ....+.+..|+.++.+++|+|++++.+++......++|||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g   78 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG   78 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence            689999999999988778999999997542   223456788999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.09  E-value=3.6e-10  Score=98.23  Aligned_cols=79  Identities=32%  Similarity=0.528  Sum_probs=67.1

Q ss_pred             ccceeeeccCceEEEEEEc----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          196 FKELIGKGGFGKVYKGVLS----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.+.||+|+||.||+|...    ..+..+++|.+... ..+...+|.+|+.++.+++|+||+++++++...+..+++|||
T Consensus         9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   88 (283)
T cd05090           9 FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY   88 (283)
T ss_pred             eeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence            3478999999999999852    23578999999754 344557899999999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        89 ~~~~   92 (283)
T cd05090          89 LNQG   92 (283)
T ss_pred             CCCC
Confidence            9865

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=3.5e-10  Score=98.06  Aligned_cols=77  Identities=30%  Similarity=0.455  Sum_probs=70.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+........+.|.+|+.++.+++|+|++++++.+...+..++||||+++|
T Consensus        11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (280)
T cd06611          11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGG   87 (280)
T ss_pred             HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCC
Confidence            67999999999999987778999999998766666778999999999999999999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=5.6e-10  Score=99.71  Aligned_cols=77  Identities=23%  Similarity=0.278  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.|..|..++..++|+||+++.+++...+.+++||||+++|
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~   86 (331)
T cd05597           7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGG   86 (331)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCC
Confidence            7899999999999999888899999999642   2233556889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.08  E-value=4.6e-10  Score=99.97  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=67.5

Q ss_pred             cceeeec--cCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKG--GFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G--~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .++||+|  +|+.||++....+|..||+|++...  .....+.+.+|+.++..++|+||++++++|...+..++|+||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            3679999  7889999999888999999999754  23334567789999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        83 ~~   84 (327)
T cd08227          83 YG   84 (327)
T ss_pred             CC
Confidence            75

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.08  E-value=1.9e-10  Score=104.61  Aligned_cols=78  Identities=27%  Similarity=0.450  Sum_probs=66.0

Q ss_pred             cceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      .+.||+|+||.||++....     .+..||+|.++.. .......+.+|+.++..+ +|+||++++|+|...+..++|||
T Consensus        43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e  122 (374)
T cd05106          43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE  122 (374)
T ss_pred             hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence            3789999999999988532     2357999999765 334456789999999999 89999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus       123 y~~~g  127 (374)
T cd05106         123 YCCYG  127 (374)
T ss_pred             hccCC
Confidence            99876

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.08  E-value=7e-10  Score=96.93  Aligned_cols=77  Identities=27%  Similarity=0.432  Sum_probs=70.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+........+.+.+|+.++.+++|+|++++.+.|...+..++||||+++|
T Consensus        18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   94 (292)
T cd06644          18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGG   94 (292)
T ss_pred             heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCC
Confidence            67999999999999998888999999998776666788999999999999999999999999999999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.08  E-value=5.1e-10  Score=95.27  Aligned_cols=76  Identities=36%  Similarity=0.645  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||.||+|... ++..+|+|.+.... ......|.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            36899999999999976 47889999987653 344557999999999999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.08  E-value=9e-10  Score=95.52  Aligned_cols=77  Identities=25%  Similarity=0.457  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....++..+|+|.+... .......+.+|+.++.+++|+|++++++++...+..++||||+++|
T Consensus        10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   87 (277)
T cd06641          10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG   87 (277)
T ss_pred             eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence            6899999999999998777899999998644 3344567899999999999999999999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.08  E-value=6e-10  Score=98.02  Aligned_cols=76  Identities=33%  Similarity=0.522  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+.... ......+.+|+.++.+++|+||+++.+++......++||||+++
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   87 (303)
T cd07869          11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHT   87 (303)
T ss_pred             eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCc
Confidence            78999999999999998778999999997542 22244678899999999999999999999999999999999964

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.08  E-value=5.7e-10  Score=98.98  Aligned_cols=77  Identities=21%  Similarity=0.326  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEE---cCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVL---STSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~---~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++..   ...|..+|+|.+....  ......+..|+.++.+++|+||+++.+++...+.++|||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            4699999999998865   3457899999997542  2234567889999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        82 ~~   83 (318)
T cd05582          82 GG   83 (318)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.07  E-value=6.4e-10  Score=100.46  Aligned_cols=77  Identities=18%  Similarity=0.262  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.++..   .......+.+|+.++.+++|+||+++++++...+.++|||||+++|
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (360)
T cd05627           7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGG   86 (360)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCc
Confidence            7899999999999999888899999999743   2233567888999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.07  E-value=6.3e-10  Score=98.79  Aligned_cols=77  Identities=29%  Similarity=0.418  Sum_probs=64.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHH-HhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIV-SMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~-~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..+|+|.+...   .......+..|.. ++..++|+||+++.+++...+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999999888899999999653   1223445666665 57789999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (321)
T cd05603          81 G   81 (321)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.07  E-value=6.9e-10  Score=98.87  Aligned_cols=77  Identities=23%  Similarity=0.265  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.++..   .....+.+..|+.++..++|+||+++.+++...+..+|||||+++|
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (330)
T cd05601           7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGG   86 (330)
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCC
Confidence            7899999999999999888899999999754   2234567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.06  E-value=7.9e-10  Score=98.73  Aligned_cols=77  Identities=21%  Similarity=0.199  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+..|..++..++|+||+++.+++...+..+|||||+++|
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg   86 (331)
T cd05624           7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGG   86 (331)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCC
Confidence            7899999999999999878899999999653   2233456888999999999999999999999999999999999886

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.06  E-value=9.2e-10  Score=103.39  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCC-CceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTS-GLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++..... +..|++|.+..........+.+|+.++.+++|+|||+++++|...+..+|||||+++|
T Consensus        73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg  150 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGG  150 (478)
T ss_pred             EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCC
Confidence            7899999999999987655 6788999876655555567888999999999999999999999999999999999986

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.06  E-value=1.2e-10  Score=107.22  Aligned_cols=68  Identities=25%  Similarity=0.508  Sum_probs=60.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+-|.||.|.+.  +..||||+++...       ..++..|.+|+|+||+.+.|+|....-+|||||||+.|
T Consensus       130 eWlGSGaQGAVF~Grl~--netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLH--NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhccCcccceeeeecc--CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence            67999999999999997  6899999886532       24788899999999999999999999999999999987

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.06  E-value=6.3e-10  Score=98.84  Aligned_cols=77  Identities=26%  Similarity=0.407  Sum_probs=65.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||+|.....+..+|+|.++..   .......+..|..++..+ +|+||+++.+++...+.++|||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999999999877899999999754   223455678899888865 799999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (321)
T cd05591          81 G   81 (321)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.06  E-value=6e-10  Score=96.04  Aligned_cols=76  Identities=29%  Similarity=0.393  Sum_probs=64.0

Q ss_pred             eeeeccCceEEEEEEcC--CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVLST--SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||+|....  ....+++|.+... .......|.+|+.++..++|+||++++|+|...+..++||||+++|
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            58999999999997643  2357889987654 3444667999999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.06  E-value=5.6e-10  Score=96.24  Aligned_cols=79  Identities=30%  Similarity=0.632  Sum_probs=68.5

Q ss_pred             ccceeeeccCceEEEEEEcCCCc---eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGL---PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~---~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.+.||+|+||.||+|.....+.   .||+|.+... ......+|..|+.++.+++|+|++++.+++...+..++|+||+
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~   87 (269)
T cd05065           8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM   87 (269)
T ss_pred             EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence            34789999999999999865443   6999998765 4555678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        88 ~~~   90 (269)
T cd05065          88 ENG   90 (269)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.05  E-value=1.1e-09  Score=94.13  Aligned_cols=77  Identities=25%  Similarity=0.362  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......|.+|+.++.+++|+|++++++++...+..++++||+++|
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   87 (267)
T cd08228           8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAG   87 (267)
T ss_pred             eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCC
Confidence            7899999999999998777899999988642   3344567999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.05  E-value=8.7e-10  Score=93.97  Aligned_cols=78  Identities=26%  Similarity=0.319  Sum_probs=69.6

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.....+..+++|.+...  ......++.+|+.++.+++|+|+++++++|...+..++|+||+++|
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG   84 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence            37899999999999999888899999998643  4455678999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.05  E-value=9e-11  Score=110.16  Aligned_cols=76  Identities=33%  Similarity=0.545  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCC-C--ceEEEEEEccCCHH-hHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTS-G--LPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-g--~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|.||.|++|.+... |  ..||||+++.+... ...+|++|+.+|.+|+|+|+++|+|.... ..+++|+|+++.
T Consensus       116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELapl  194 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPL  194 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhccc
Confidence            7899999999999998532 3  56899999887543 68899999999999999999999999986 788999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       195 G  195 (1039)
T KOG0199|consen  195 G  195 (1039)
T ss_pred             c
Confidence            6

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.05  E-value=1e-09  Score=108.62  Aligned_cols=77  Identities=29%  Similarity=0.459  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....+..||+|+++..   .....+.|.+|+.++.+++|||+++++++|...+..+++|||+++|
T Consensus         8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGG   87 (932)
T PRK13184          8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGY   87 (932)
T ss_pred             EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCC
Confidence            7899999999999998877899999999754   2334567999999999999999999999999999999999999876

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.05  E-value=7.5e-10  Score=98.31  Aligned_cols=77  Identities=29%  Similarity=0.437  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+..|..++..+ +|+||+++.+++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999999877899999999754   223355678898888877 799999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (318)
T cd05570          81 G   81 (318)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.05  E-value=7.6e-10  Score=96.73  Aligned_cols=76  Identities=26%  Similarity=0.460  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.++... ......+.+|+.++.+++|+||+++.+++...+..++||||+++
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   87 (288)
T cd07871          11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS   87 (288)
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc
Confidence            78999999999999988788999999987542 22345678999999999999999999999988899999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=5.6e-10  Score=100.07  Aligned_cols=77  Identities=22%  Similarity=0.308  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...   .......+.+|+.++..++|+||+++++++...+..++||||+++|
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (350)
T cd05573           7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGG   86 (350)
T ss_pred             EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCC
Confidence            7899999999999999878899999999754   1234567899999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.05  E-value=7.6e-10  Score=97.64  Aligned_cols=76  Identities=28%  Similarity=0.479  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.++... ......+.+|+.++.+++|+||+++++++...+..++||||+++
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   88 (309)
T cd07872          12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK   88 (309)
T ss_pred             EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC
Confidence            68999999999999988778899999997542 22345678999999999999999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.04  E-value=6.5e-11  Score=111.12  Aligned_cols=77  Identities=32%  Similarity=0.474  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~Ey  270 (274)
                      +.||+|+||.||+|..+..|..||||.++.. ....++...+|+++|.+++|+|||++++.-....      ...|+|||
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy   98 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY   98 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence            6899999999999999889999999999765 3344667899999999999999999998865543      46899999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |.+|
T Consensus        99 C~gG  102 (732)
T KOG4250|consen   99 CSGG  102 (732)
T ss_pred             cCCC
Confidence            9987

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.04  E-value=5.9e-10  Score=101.28  Aligned_cols=77  Identities=25%  Similarity=0.354  Sum_probs=69.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH---HhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---QWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|.||.||++..+..|..+|+|.+.....   .....+.+|+.+|.++. |||+|++.+.+.....++||||++.+
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~G  120 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEG  120 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCC
Confidence            789999999999999998899999999976532   24568999999999998 99999999999999999999999997


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       121 G  121 (382)
T KOG0032|consen  121 G  121 (382)
T ss_pred             c
Confidence            6

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.04  E-value=8.4e-10  Score=98.19  Aligned_cols=77  Identities=23%  Similarity=0.374  Sum_probs=64.9

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccC----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHD----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++...   ..+..+|+|.++..    .......+.+|+.+|.+++|+||+++++++...+..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            47999999999999763   35788999999753    122345678899999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        82 ~~~~   85 (323)
T cd05584          82 LSGG   85 (323)
T ss_pred             CCCc
Confidence            9875

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.04  E-value=4.7e-10  Score=97.19  Aligned_cols=77  Identities=26%  Similarity=0.462  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....+..||+|.+... .....+.+.+|+.++.+++|+||++++++|...+..++|+||+++|
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGG   87 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCC
Confidence            5799999999999998777889999998754 3445668999999999999999999999999999999999999875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.04  E-value=1.1e-09  Score=97.45  Aligned_cols=77  Identities=29%  Similarity=0.413  Sum_probs=64.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHH-HhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIV-SMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~-~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....|..||+|.+...   .....++++.|.. ++..++|+||+++.+++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3699999999999999888999999999753   1223445666665 45789999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (323)
T cd05575          81 G   81 (323)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.04  E-value=1.2e-10  Score=103.34  Aligned_cols=77  Identities=31%  Similarity=0.479  Sum_probs=70.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|.+|+|-++.-...|+.||||.++.+   +.++.-...+|+++|+.|+||||++++-++++.+.+.|||||..+|
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~G  138 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGG  138 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCc
Confidence            6799999999999988778999999999876   4556667889999999999999999999999999999999999876

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.04  E-value=2.1e-11  Score=103.48  Aligned_cols=77  Identities=31%  Similarity=0.414  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeE-EEeCCe-EEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGY-CRRKQE-LLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~-~~~~~~-~~LV~Ey~~~  273 (274)
                      ++||+|.||.|||+....+|..+|.|.++-+  +...+++...|+.+|.+|+|||||+.+++ +.+..+ +.||||||..
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~  104 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDA  104 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcc
Confidence            6799999999999988777999999999854  56667889999999999999999999994 445555 8999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       105 G  105 (375)
T KOG0591|consen  105 G  105 (375)
T ss_pred             c
Confidence            7

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.04  E-value=7.5e-10  Score=98.03  Aligned_cols=76  Identities=29%  Similarity=0.543  Sum_probs=63.9

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+.    .||+|.++.. .....++|..|+.++..++|+||++++|+|... ..++++||++
T Consensus        13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~   91 (316)
T cd05108          13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP   91 (316)
T ss_pred             eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCC
Confidence            789999999999998754444    3899998754 345567899999999999999999999999764 5689999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        92 ~g   93 (316)
T cd05108          92 FG   93 (316)
T ss_pred             CC
Confidence            76

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.04  E-value=1.1e-09  Score=97.55  Aligned_cols=77  Identities=22%  Similarity=0.367  Sum_probs=63.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHH---hcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVS---MGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~---l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||+|.++..   .....+.+.+|+.+   +.+++|+||+++++++...+..++||||+
T Consensus         5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~   84 (324)
T cd05589           5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYA   84 (324)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCC
Confidence            6899999999999999878899999999753   12234456666554   46788999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        85 ~~~   87 (324)
T cd05589          85 AGG   87 (324)
T ss_pred             CCC
Confidence            876

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.04  E-value=4.4e-10  Score=96.29  Aligned_cols=76  Identities=24%  Similarity=0.517  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..+|+|.+.........++..|+.++.+++|+|++++++++...+..++||||+++|
T Consensus        12 ~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (261)
T cd05148          12 RKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKG   87 (261)
T ss_pred             hhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccC
Confidence            789999999999999986 7899999998765555678999999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.04  E-value=6.7e-10  Score=102.90  Aligned_cols=77  Identities=29%  Similarity=0.393  Sum_probs=69.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|.|+.|..+.....+..||+|.+.+.  .....+.+.+|+.+|..++|||||+|+.+.+....++|||||+.+|
T Consensus        62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~g  140 (596)
T KOG0586|consen   62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGG  140 (596)
T ss_pred             eeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCc
Confidence            6899999999999999888999999999866  3344456899999999999999999999999999999999999876

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.04  E-value=6e-10  Score=95.78  Aligned_cols=77  Identities=35%  Similarity=0.657  Sum_probs=68.6

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.....+..+|+|.+.... ....++.+|+.++.+++|+||++++++|...+..+++|||+++|
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (263)
T cd05052          11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   87 (263)
T ss_pred             eeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCC
Confidence            378999999999999998778999999987543 34568999999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.04  E-value=1.2e-09  Score=95.30  Aligned_cols=77  Identities=23%  Similarity=0.325  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+....   ......+.+|+.+|.+++|+|++++.+++...+..+++|||+++|
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (285)
T cd05632           6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG   85 (285)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence            68999999999999998788999999986542   223456788999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.04  E-value=1.1e-09  Score=95.04  Aligned_cols=77  Identities=27%  Similarity=0.447  Sum_probs=70.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||++.....+..+++|.+..........|.+|+.++..++|+|++++.++|...+..++|+||+++|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            57999999999999998778899999997666666778999999999999999999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.04  E-value=1.1e-09  Score=97.48  Aligned_cols=77  Identities=27%  Similarity=0.401  Sum_probs=64.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHH-HhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIV-SMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~-~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....|..+|+|.+...   ......++..|.. ++..++|+||+++.+++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3689999999999998878899999999653   2233456667765 46779999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (325)
T cd05604          81 G   81 (325)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.04  E-value=1e-09  Score=97.38  Aligned_cols=77  Identities=25%  Similarity=0.403  Sum_probs=64.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcC-CCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.++...   ......+..|..++.. ++|+||+++++++...+.++|||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999998888999999997541   2234566778888876 4899999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (316)
T cd05619          81 G   81 (316)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.03  E-value=8.3e-10  Score=98.16  Aligned_cols=77  Identities=27%  Similarity=0.382  Sum_probs=65.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....++..||+|.+...   .......+..|..++..+ +|+||+++++++...+.+++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999999888899999999753   223456678898888876 699999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (320)
T cd05590          81 G   81 (320)
T ss_pred             c
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.03  E-value=1.2e-09  Score=97.58  Aligned_cols=77  Identities=22%  Similarity=0.244  Sum_probs=67.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......|..|+.++..++|+||+++.+++...+.++|||||+++|
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g   86 (332)
T cd05623           7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGG   86 (332)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCC
Confidence            7899999999999999888899999999643   2223445888999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.03  E-value=7.7e-10  Score=96.14  Aligned_cols=75  Identities=27%  Similarity=0.313  Sum_probs=64.4

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....|..+|+|.+....   ....+.+..|+.++.+++|+||+++.+++......++||||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~   78 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG   78 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence            699999999999998889999999996431   122345667999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.03  E-value=9.4e-10  Score=94.79  Aligned_cols=78  Identities=32%  Similarity=0.663  Sum_probs=66.3

Q ss_pred             cceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|.....   +..+|+|.++.. .....+.|.+|+.++.+++|+||+++.+++...+..++||||++
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME   88 (267)
T ss_pred             eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence            37899999999999987432   347999998754 33446789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        89 ~~   90 (267)
T cd05066          89 NG   90 (267)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.03  E-value=8.1e-10  Score=94.53  Aligned_cols=75  Identities=32%  Similarity=0.537  Sum_probs=65.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..+|+|.+.... ....+|.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        10 ~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~   84 (256)
T cd05114          10 KELGSGQFGVVHLGKWRA-QIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENG   84 (256)
T ss_pred             eEecCCcCceEEEEEecc-CceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence            789999999999998864 5689999886542 23467899999999999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.03  E-value=9.3e-10  Score=94.72  Aligned_cols=77  Identities=31%  Similarity=0.695  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCC---ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+   ..+|+|.+... .....+++.+|+.++.+++|+|++++.+++...+..++||||+++
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (268)
T cd05063          11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMEN   90 (268)
T ss_pred             eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCC
Confidence            78999999999999986444   37999998755 344467899999999999999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        91 ~   91 (268)
T cd05063          91 G   91 (268)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.03  E-value=1.3e-10  Score=101.78  Aligned_cols=72  Identities=36%  Similarity=0.528  Sum_probs=59.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC---e--EEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ---E--LLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~---~--~~LV~Ey~~  272 (274)
                      +++|+|+||.||+|.+...+..||||+.-.+.+    ---+|+.+|.+++|||||+|+-++....   +  +.|||||||
T Consensus        30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP  105 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP  105 (364)
T ss_pred             EEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence            789999999999999988889999999865532    2246899999999999999998886542   2  368999998


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      .
T Consensus       106 ~  106 (364)
T KOG0658|consen  106 E  106 (364)
T ss_pred             H
Confidence            4

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.03  E-value=1.1e-09  Score=95.19  Aligned_cols=77  Identities=32%  Similarity=0.592  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEc----CCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLS----TSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++...    ..+..+|+|.+........+.|.+|+.++.+++|+|++++.++|...  ...++|+||+
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   89 (284)
T cd05081          10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYL   89 (284)
T ss_pred             eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEec
Confidence            78999999999999853    34688999999877666678899999999999999999999988643  4689999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        90 ~~~   92 (284)
T cd05081          90 PYG   92 (284)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.03  E-value=6.8e-10  Score=95.69  Aligned_cols=77  Identities=22%  Similarity=0.433  Sum_probs=64.7

Q ss_pred             ceeeeccCceEEEEEEcCC------------CceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEE
Q 045713          198 ELIGKGGFGKVYKGVLSTS------------GLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELL  265 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~  265 (274)
                      +.||+|+||.||+|.+...            ...|++|.+..........|..|+.++..++||||++++|+|......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            3689999999999986421            2358999887655555668899999999999999999999999988999


Q ss_pred             EEEeccCCC
Q 045713          266 LVYNYMHNK  274 (274)
Q Consensus       266 LV~Ey~~~G  274 (274)
                      ++|||+++|
T Consensus        81 lv~e~~~~~   89 (262)
T cd05077          81 MVEEFVEFG   89 (262)
T ss_pred             EEEecccCC
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.03  E-value=1.3e-09  Score=95.75  Aligned_cols=77  Identities=25%  Similarity=0.399  Sum_probs=69.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+........+.+.+|+.++..++|+|+++++++|...+..++||||+++|
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  101 (297)
T cd06656          25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG  101 (297)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCC
Confidence            78999999999999987778999999997654445567899999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.03  E-value=5.8e-10  Score=96.54  Aligned_cols=78  Identities=28%  Similarity=0.528  Sum_probs=67.4

Q ss_pred             cceeeeccCceEEEEEEcC-----CCceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      .+.||+|+||.||+|...+     .+..+|+|.++.... ...+.|.+|+.++.+++|+|++++.++|...+..++||||
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   89 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY   89 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence            3789999999999998743     247899999976533 3567899999999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        90 ~~~~   93 (280)
T cd05049          90 MEHG   93 (280)
T ss_pred             CCCC
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.02  E-value=9.6e-10  Score=95.25  Aligned_cols=77  Identities=26%  Similarity=0.447  Sum_probs=65.8

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|....     .+..+|+|.+... ......+|.+|+.++.+++|+|+++++++|......++|+||+
T Consensus        12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~   91 (277)
T cd05062          12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM   91 (277)
T ss_pred             eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecC
Confidence            789999999999997642     2467999998654 3344667999999999999999999999999899999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        92 ~~~   94 (277)
T cd05062          92 TRG   94 (277)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.02  E-value=7.9e-10  Score=96.33  Aligned_cols=77  Identities=29%  Similarity=0.510  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ..||+|+||.||++....     .+..+|+|.+... .....++|.+|+.++.+++|+|++++.++|...+..++++||+
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   90 (288)
T cd05050          11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYM   90 (288)
T ss_pred             ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecC
Confidence            689999999999998642     3578999998755 3455678999999999999999999999999988999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        91 ~~~   93 (288)
T cd05050          91 AYG   93 (288)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.02  E-value=8.6e-10  Score=95.64  Aligned_cols=77  Identities=30%  Similarity=0.529  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++....     .+..|++|.+... ......+|.+|+.++.+++|+||+++++++...+..++||||+
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   91 (277)
T cd05036          12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELM   91 (277)
T ss_pred             eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecC
Confidence            789999999999999865     5678999988755 3444567999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        92 ~g~   94 (277)
T cd05036          92 AGG   94 (277)
T ss_pred             CCC
Confidence            865

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.02  E-value=1.8e-09  Score=92.09  Aligned_cols=77  Identities=32%  Similarity=0.526  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-----HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-----EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+..+++|.+....     .+..+.+.+|+.++.+++|+|++++.+++...+..++++||++
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP   85 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence            68999999999999987678999999986532     3345789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      ++
T Consensus        86 ~~   87 (258)
T cd06632          86 GG   87 (258)
T ss_pred             CC
Confidence            64

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.02  E-value=1.7e-09  Score=94.49  Aligned_cols=77  Identities=26%  Similarity=0.343  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+.+|+.++.+++|+|++++.+.+...+..++||||+++|
T Consensus         6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~   85 (285)
T cd05630           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG   85 (285)
T ss_pred             EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence            6899999999999999888899999998654   2233456788999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.02  E-value=5.2e-10  Score=102.22  Aligned_cols=78  Identities=27%  Similarity=0.487  Sum_probs=69.5

Q ss_pred             cc-ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          196 FK-ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       196 f~-~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      |. ++||+|.||.||-|..+..|+.||||.+...  .........+|+.+|..++||.||.|...|+..+.+++|||-+.
T Consensus       567 f~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  567 FADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             hhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence            44 7999999999999999999999999999765  33445778999999999999999999999999999999999764


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus       647 G  647 (888)
T KOG4236|consen  647 G  647 (888)
T ss_pred             c
Confidence            3

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.02  E-value=1.6e-09  Score=93.91  Aligned_cols=77  Identities=25%  Similarity=0.452  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....+..+|+|.+... .......+.+|+.++.+++|+|++++++.|......++||||+++|
T Consensus        10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (277)
T cd06640          10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGG   87 (277)
T ss_pred             hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCC
Confidence            6799999999999998777899999998754 3455678999999999999999999999999999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.01  E-value=1.5e-10  Score=92.59  Aligned_cols=75  Identities=29%  Similarity=0.511  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ++||+|.+|+||++...+.++.||.|+++.+  +...-..-++|+.++.+++|+|||+|+...+....+-||+|||.
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd   84 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh
Confidence            6799999999999999888999999998755  33334578999999999999999999999999999999999985

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.01  E-value=1.7e-09  Score=92.83  Aligned_cols=78  Identities=26%  Similarity=0.353  Sum_probs=68.8

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      .+.||+|+||.||++.....|..+|+|.++..   .....+.+.+|+.++.+++|+|++++++++...+..+++|||+++
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA   86 (267)
T ss_pred             eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence            37899999999999999877899999988632   334467899999999999999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        87 ~   87 (267)
T cd08224          87 G   87 (267)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.01  E-value=1.6e-09  Score=96.62  Aligned_cols=77  Identities=22%  Similarity=0.322  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..+|+|.++..   .....+.+..|+.++.++ +|+||+++.+++...+.++|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3699999999999999888899999999754   223456688999999888 699999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (327)
T cd05617          81 G   81 (327)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.01  E-value=7.9e-10  Score=96.80  Aligned_cols=77  Identities=30%  Similarity=0.500  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEEcCC--------------CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC
Q 045713          198 ELIGKGGFGKVYKGVLSTS--------------GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ  262 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~--------------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~  262 (274)
                      +.||+|+||.||++...+.              ...||+|.++.. .......|.+|+.++.+++|+|+++++++|...+
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~   90 (295)
T cd05097          11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD   90 (295)
T ss_pred             hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC
Confidence            7899999999999876421              235899998765 3445667999999999999999999999999999


Q ss_pred             eEEEEEeccCCC
Q 045713          263 ELLLVYNYMHNK  274 (274)
Q Consensus       263 ~~~LV~Ey~~~G  274 (274)
                      ..++||||+++|
T Consensus        91 ~~~lv~e~~~~~  102 (295)
T cd05097          91 PLCMITEYMENG  102 (295)
T ss_pred             ccEEEEecCCCC
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.01  E-value=1.2e-09  Score=99.07  Aligned_cols=76  Identities=22%  Similarity=0.326  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-----eEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-----ELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-----~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..||+|.+...  .....+.+.+|+.++..++|+||+++++++...+     .+++|+||
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~   85 (372)
T cd07853           6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTEL   85 (372)
T ss_pred             ceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeec
Confidence            7899999999999998777899999998653  3344567899999999999999999999998776     78999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      +.+
T Consensus        86 ~~~   88 (372)
T cd07853          86 MQS   88 (372)
T ss_pred             ccc
Confidence            864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.01  E-value=1.5e-09  Score=96.41  Aligned_cols=77  Identities=25%  Similarity=0.382  Sum_probs=63.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcC-CCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..||+|.++..   .....+.+..|..++.. .+|+||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999999888899999999754   22334456667777665 4899999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (316)
T cd05592          81 G   81 (316)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.01  E-value=6.4e-10  Score=96.57  Aligned_cols=77  Identities=34%  Similarity=0.517  Sum_probs=67.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...+.+..+|+|.+...  .....+.+.+|+.++.+++|+|+++++++|...+..++|+||++++
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (286)
T cd07846           7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT   85 (286)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence            7899999999999999877899999988643  2234567889999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.00  E-value=1.8e-09  Score=94.71  Aligned_cols=77  Identities=23%  Similarity=0.394  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+..........+.+|+.++.+++|+|++++++.|......++||||+++|
T Consensus        26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~  102 (296)
T cd06654          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG  102 (296)
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCC
Confidence            67999999999999987778999999997665445677899999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.00  E-value=9.3e-10  Score=95.72  Aligned_cols=77  Identities=22%  Similarity=0.407  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+... .......+.+|+.++.+++|+||+++++.+...+..++|+||+++|
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (286)
T cd06622           7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAG   84 (286)
T ss_pred             hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCC
Confidence            6899999999999999877899999998754 3444578999999999999999999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.00  E-value=1.7e-09  Score=93.10  Aligned_cols=77  Identities=26%  Similarity=0.412  Sum_probs=69.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.++.........+.+|+.++..++|+||+++++.+...+..++++||+++|
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~   91 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGG   91 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCC
Confidence            67999999999999988778999999997665455567889999999999999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.00  E-value=1.6e-10  Score=99.83  Aligned_cols=87  Identities=26%  Similarity=0.443  Sum_probs=78.0

Q ss_pred             ChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCe
Q 045713          185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQE  263 (274)
Q Consensus       185 ~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~  263 (274)
                      +++|+...|.   ++||+|+++.|-.+..-.+|.++|||++.....+.+....+|++++... .|+||++|+.|+++...
T Consensus        74 ~F~d~YkLt~---e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~  150 (463)
T KOG0607|consen   74 KFEDMYKLTS---ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR  150 (463)
T ss_pred             hHHHHHHhHH---HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence            4778888774   8899999999999987667899999999888777788999999999887 69999999999999999


Q ss_pred             EEEEEeccCCC
Q 045713          264 LLLVYNYMHNK  274 (274)
Q Consensus       264 ~~LV~Ey~~~G  274 (274)
                      +|||||-|.+|
T Consensus       151 FYLVfEKm~GG  161 (463)
T KOG0607|consen  151 FYLVFEKMRGG  161 (463)
T ss_pred             EEEEEecccCc
Confidence            99999999887

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.00  E-value=1.3e-09  Score=95.11  Aligned_cols=77  Identities=29%  Similarity=0.440  Sum_probs=65.2

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|...+     .+..||+|.+... .......+.+|+.++.+++|+|++++++.+...+..++||||+
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   91 (288)
T cd05061          12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM   91 (288)
T ss_pred             eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCC
Confidence            789999999999997642     2457999998654 2334557899999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        92 ~~g   94 (288)
T cd05061          92 AHG   94 (288)
T ss_pred             CCC
Confidence            876

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.00  E-value=1.1e-09  Score=93.33  Aligned_cols=77  Identities=21%  Similarity=0.401  Sum_probs=67.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..+|+|.+...  .....+.+.+|+.++.+++|+|++++++.|...+..++++||++++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (257)
T cd08225           6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG   84 (257)
T ss_pred             EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence            7899999999999999888899999998654  2234567889999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.00  E-value=1.7e-09  Score=92.51  Aligned_cols=75  Identities=40%  Similarity=0.558  Sum_probs=67.2

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++...  |..||+|.+..... ..+++.+|+.++.+++|+|++++++++...+..++|+||+++|
T Consensus        11 ~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   85 (256)
T cd05039          11 GATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKG   85 (256)
T ss_pred             eeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCC
Confidence            478999999999999876  68999999976644 5678999999999999999999999999888999999999865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.00  E-value=1.2e-09  Score=96.23  Aligned_cols=78  Identities=29%  Similarity=0.583  Sum_probs=66.3

Q ss_pred             cceeeeccCceEEEEEEcCCCc--eEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGL--PIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||++.....+.  .+++|.++.. ......+|.+|+.++.++ +|+|++++.++|...+..++|+||++
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   91 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   91 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence            4789999999999999865554  4688887654 344567899999999999 89999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        92 ~~   93 (303)
T cd05088          92 HG   93 (303)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.00  E-value=1.2e-09  Score=93.84  Aligned_cols=77  Identities=30%  Similarity=0.534  Sum_probs=66.7

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.+.||+|++|.||++.... +..||+|.++... ...++|.+|+.++.+++|+|++++.++|...+..+++|||+++|
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (261)
T cd05068          10 LLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYG   86 (261)
T ss_pred             eEEEecccCCccEEEEEecC-CeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCC
Confidence            44899999999999999764 5789999997543 23567999999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.00  E-value=2.3e-09  Score=91.85  Aligned_cols=77  Identities=30%  Similarity=0.520  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-----HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-----EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|++|.||++.....+..+|+|.+....     ....+.+.+|+.++.+++|+||+++++++...+.+++++||++
T Consensus         8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   87 (263)
T cd06625           8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMP   87 (263)
T ss_pred             ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECC
Confidence            78999999999999987778999999986431     2234578999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        88 ~~   89 (263)
T cd06625          88 GG   89 (263)
T ss_pred             CC
Confidence            75

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.99  E-value=2.5e-09  Score=93.29  Aligned_cols=77  Identities=21%  Similarity=0.314  Sum_probs=66.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~G  274 (274)
                      +.||.|++|.||++.....+..+|+|.+... ......++.+|++++.+++|+||++++++|...  +.++|||||+++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~   86 (287)
T cd06621           7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG   86 (287)
T ss_pred             EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence            7899999999999999877899999999754 334567899999999999999999999998653  3689999999875

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.99  E-value=1.1e-09  Score=93.64  Aligned_cols=75  Identities=32%  Similarity=0.595  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCC----------ceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSG----------LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g----------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      +.||+|+||.||+|.....+          ..+++|.+...... ...|.+|+.++.+++|+|+++++|+|.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46899999999999987544          35888887654333 6789999999999999999999999988 778999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      +||+++|
T Consensus        79 ~e~~~~~   85 (259)
T cd05037          79 EEYVKFG   85 (259)
T ss_pred             EEcCCCC
Confidence            9999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.99  E-value=1.6e-09  Score=93.94  Aligned_cols=76  Identities=37%  Similarity=0.607  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|++|.||+|....+|..+|+|.++... ......+.+|+.++.+++|+|+++++++|...+..+|||||+++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (284)
T cd07836           6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK   82 (284)
T ss_pred             eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc
Confidence            78999999999999998788999999997653 22345678899999999999999999999999999999999975

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.99  E-value=1e-09  Score=98.50  Aligned_cols=78  Identities=22%  Similarity=0.405  Sum_probs=64.0

Q ss_pred             cceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeC-CeEEEEE
Q 045713          197 KELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK-QELLLVY  268 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~-~~~~LV~  268 (274)
                      .+.||+|+||.||++...     ..+..||||.++.. .......+.+|+.++.++ +|+|+++++++|... ...++++
T Consensus        12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~   91 (343)
T cd05103          12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV   91 (343)
T ss_pred             cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence            478999999999999742     24678999999764 334456789999999999 689999999988654 4679999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus        92 ey~~~g   97 (343)
T cd05103          92 EFCKFG   97 (343)
T ss_pred             eccCCC
Confidence            999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.99  E-value=8.9e-10  Score=97.00  Aligned_cols=77  Identities=27%  Similarity=0.456  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--eEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--ELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--~~~LV~Ey~~~G  274 (274)
                      +.||+|.||.||.+...++|...|||.+........+...+|+.+|.+++|+|||+..|.....+  .++|.|||+++|
T Consensus        23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G  101 (313)
T KOG0198|consen   23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG  101 (313)
T ss_pred             ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence            78999999999999998778999999987653333667899999999999999999999755444  689999999987

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.99  E-value=1.4e-09  Score=94.28  Aligned_cols=78  Identities=33%  Similarity=0.624  Sum_probs=67.0

Q ss_pred             cceeeeccCceEEEEEEcCCC-----ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVLSTSG-----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      .+.||+|+||.||+|.....+     ..+|+|.+... ......+|.+|+.++.+++|+||+++++++...+..+++|||
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~   89 (283)
T cd05048          10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY   89 (283)
T ss_pred             hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence            378999999999999875433     67999998754 344466799999999999999999999999998999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        90 ~~~~   93 (283)
T cd05048          90 LAHG   93 (283)
T ss_pred             CCCC
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.99  E-value=2.9e-09  Score=90.93  Aligned_cols=77  Identities=22%  Similarity=0.344  Sum_probs=68.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||.+.....+..+++|.+...  +....+++.+|+.++.+++|+|++++++++...+.++++|||+++|
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (256)
T cd08221           6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG   84 (256)
T ss_pred             eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence            7899999999999988777899999998654  3455678999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.99  E-value=3.8e-10  Score=96.87  Aligned_cols=77  Identities=26%  Similarity=0.499  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEEcCCC-------ceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSG-------LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||+|.....+       ..+++|.+........++|..|+.++..++|+|++++.++|...+..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            46899999999999875433       34888888665555567899999999999999999999999998999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        81 ~~~g   84 (258)
T cd05078          81 VKFG   84 (258)
T ss_pred             CCCC
Confidence            9876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.99  E-value=1.8e-09  Score=92.69  Aligned_cols=77  Identities=22%  Similarity=0.387  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|++|.||++....++..+|+|.+....      ....+.+.+|+.++.+++|+||++++++|...+..++|+||+
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~   85 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWM   85 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEecc
Confidence            68999999999999987778999999986432      123568999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        86 ~~~   88 (268)
T cd06630          86 AGG   88 (268)
T ss_pred             CCC
Confidence            865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.99  E-value=1.9e-09  Score=93.46  Aligned_cols=77  Identities=34%  Similarity=0.495  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||++....++..+|+|++...  .....+.+.+|+.++.+++|+|++++++++......++||||++++
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~   85 (286)
T cd07847           7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHT   85 (286)
T ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCcc
Confidence            6899999999999999877899999998644  2233457889999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.99  E-value=1.8e-09  Score=93.28  Aligned_cols=76  Identities=30%  Similarity=0.427  Sum_probs=63.2

Q ss_pred             eeeeccCceEEEEEEcCC--CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVLSTS--GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~~--g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||++.....  ...+++|.+... .....+.|.+|+.++..++|+||+++++.|......++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            589999999999976432  245677777654 3445678999999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.99  E-value=4.7e-10  Score=103.82  Aligned_cols=72  Identities=28%  Similarity=0.548  Sum_probs=63.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|.||+||+|.+-+   .||||.++..  ..+..+.|.+|+..+.+-||.||+=+.|||.+.+. .||..+|++
T Consensus       398 ~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeG  471 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEG  471 (678)
T ss_pred             ceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccC
Confidence            789999999999999963   5999999866  45668899999999999999999999999987666 899888875

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.99  E-value=2e-09  Score=94.00  Aligned_cols=80  Identities=33%  Similarity=0.551  Sum_probs=67.8

Q ss_pred             cCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          194 KGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       194 ~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      .+|.  +.||+|+||.||+|.....+..+|+|.+.... ......+.+|+.++.+++|+||+++.+++...+..++|+||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY   84 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence            3444  78999999999999988778999999987542 22234678899999999999999999999998999999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      +.+
T Consensus        85 ~~~   87 (291)
T cd07870          85 MHT   87 (291)
T ss_pred             ccC
Confidence            964

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.98  E-value=2.6e-09  Score=91.26  Aligned_cols=77  Identities=25%  Similarity=0.378  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.+|++....++..+|+|++...  .....+++.+|+.++++++|+|++++.+++...+..++|+||+++|
T Consensus         6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08218           6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG   84 (256)
T ss_pred             EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence            7899999999999998877899999998643  3344568999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.98  E-value=3.9e-09  Score=90.13  Aligned_cols=77  Identities=22%  Similarity=0.346  Sum_probs=68.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.++.. .....+.+..|+.++.+++|+|++++.+.+...+.++++|||+++|
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   83 (255)
T cd08219           6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG   83 (255)
T ss_pred             EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence            7899999999999998877899999998643 3344667889999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.98  E-value=2.2e-09  Score=95.61  Aligned_cols=76  Identities=26%  Similarity=0.461  Sum_probs=64.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-----eEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-----ELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-----~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..||+|++...  .......+.+|+.++.+++|+||+++.+++....     .+++||||
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~   85 (338)
T cd07859           6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFEL   85 (338)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEec
Confidence            7899999999999998878899999998743  2334567899999999999999999999886432     47999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      |++
T Consensus        86 ~~~   88 (338)
T cd07859          86 MES   88 (338)
T ss_pred             CCC
Confidence            964

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.98  E-value=9.4e-10  Score=95.60  Aligned_cols=90  Identities=27%  Similarity=0.395  Sum_probs=72.4

Q ss_pred             cChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEe
Q 045713          184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRR  260 (274)
Q Consensus       184 ~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~  260 (274)
                      +.++++..++++|.  +.||+|+||.||++.....+..+|+|.+.... ....++.+|+.++.++ +|+|+++++++|..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            44556666777776  78999999999999998778999999886532 2235688899999998 69999999998853


Q ss_pred             -----CCeEEEEEeccCCC
Q 045713          261 -----KQELLLVYNYMHNK  274 (274)
Q Consensus       261 -----~~~~~LV~Ey~~~G  274 (274)
                           .+..++||||+++|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~  105 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGG  105 (286)
T ss_pred             cccCCCCeEEEEEeecCCC
Confidence                 34689999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.98  E-value=1.9e-09  Score=92.57  Aligned_cols=75  Identities=27%  Similarity=0.473  Sum_probs=62.4

Q ss_pred             eeeeccCceEEEEEEc--CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVLS--TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~--~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||+|.+.  +.+..||+|.+... .....++|.+|+.++.+++|+||++++|+|. .+..++|+||+++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence            3899999999999764  34567999999765 3344567999999999999999999999985 45789999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.98  E-value=1.6e-09  Score=93.40  Aligned_cols=77  Identities=34%  Similarity=0.539  Sum_probs=65.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH----------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE----------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~----------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      +.||+|+||.||+|.....+..+|+|.++....          ...+.+.+|+.++.+++|+|+++++++|...+..++|
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   86 (272)
T cd06629           7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIF   86 (272)
T ss_pred             ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEE
Confidence            689999999999999877789999998853211          1234688899999999999999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      +||+++|
T Consensus        87 ~e~~~~~   93 (272)
T cd06629          87 LEYVPGG   93 (272)
T ss_pred             EecCCCC
Confidence            9999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.98  E-value=1.9e-09  Score=93.08  Aligned_cols=77  Identities=30%  Similarity=0.584  Sum_probs=65.7

Q ss_pred             ceeeeccCceEEEEEEcCCCc--eEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL--PIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++...+++.  .+++|.+... .......+.+|+.++.++ +|+|+++++++|...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999876554  4688988754 345567899999999999 799999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (270)
T cd05047          81 G   81 (270)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.98  E-value=4.6e-10  Score=97.44  Aligned_cols=76  Identities=21%  Similarity=0.375  Sum_probs=62.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-H-hHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-Q-WMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-~-~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      +.|++|.||.||+|....++..||.|+++-+.. . ---.-++|+.+|.+++|+|||.+.-+...  -+.+|||||||++
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh  161 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH  161 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence            679999999999999988899999999976521 1 12245899999999999999999877654  4679999999974

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.98  E-value=2.6e-09  Score=93.83  Aligned_cols=77  Identities=26%  Similarity=0.446  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||.|+||.||++....++..|++|.+........+.+.+|+.++..++|+|+++++++|...+..++|+||+++|
T Consensus        25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  101 (296)
T cd06655          25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGG  101 (296)
T ss_pred             EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCC
Confidence            68999999999999987778999999997654445677899999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.98  E-value=2.2e-09  Score=94.18  Aligned_cols=77  Identities=27%  Similarity=0.385  Sum_probs=69.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||++.....+..+|+|.+..........+.+|+.++.+++|+|++++++++...+..+++|||+++|
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            57999999999999998788999999987655555677999999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.97  E-value=2.6e-09  Score=94.05  Aligned_cols=78  Identities=28%  Similarity=0.451  Sum_probs=65.9

Q ss_pred             cceeeeccCceEEEEEE-----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~-----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      .+.||+|+||.||++..     ...+..+|+|.++.. .....+.+.+|+.++.++ +|+||++++++|...+..++++|
T Consensus        40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  119 (302)
T cd05055          40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE  119 (302)
T ss_pred             cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence            37899999999999975     223468999998755 334456799999999999 79999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus       120 ~~~~~  124 (302)
T cd05055         120 YCCYG  124 (302)
T ss_pred             cCCCC
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.97  E-value=2.2e-09  Score=92.35  Aligned_cols=78  Identities=31%  Similarity=0.574  Sum_probs=64.9

Q ss_pred             cceeeeccCceEEEEEEcCC---CceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe------EE
Q 045713          197 KELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE------LL  265 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~------~~  265 (274)
                      .+.||+|+||.||+|.....   +..+|+|.++..  .......+.+|+..+.+++|+|+++++|+|...+.      .+
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   83 (273)
T cd05035           4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM   83 (273)
T ss_pred             ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence            36899999999999987543   367999999754  33446789999999999999999999999876554      69


Q ss_pred             EEEeccCCC
Q 045713          266 LVYNYMHNK  274 (274)
Q Consensus       266 LV~Ey~~~G  274 (274)
                      +++||+++|
T Consensus        84 ~v~e~~~~~   92 (273)
T cd05035          84 VILPFMKHG   92 (273)
T ss_pred             EEEeccCCC
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.97  E-value=2.4e-09  Score=93.50  Aligned_cols=77  Identities=27%  Similarity=0.492  Sum_probs=65.5

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|....     ....+++|.+... ......++.+|+.++.+++|+||+++++.|...+..++++||+
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   85 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYA   85 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEec
Confidence            689999999999998642     2357899988755 3444678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        86 ~~~   88 (290)
T cd05045          86 KYG   88 (290)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.97  E-value=3.3e-09  Score=92.66  Aligned_cols=77  Identities=27%  Similarity=0.380  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus         7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   86 (290)
T cd05580           7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGG   86 (290)
T ss_pred             EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCC
Confidence            7899999999999999877899999998653   2234567899999999999999999999999999999999999765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.97  E-value=2.5e-09  Score=93.97  Aligned_cols=76  Identities=28%  Similarity=0.489  Sum_probs=66.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.+.... ......+.+|+.++.+++|+||+++++++...+..++|+||+++
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~   88 (301)
T cd07873          12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK   88 (301)
T ss_pred             eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc
Confidence            68999999999999988778999999987542 23345678899999999999999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.97  E-value=1.8e-09  Score=92.52  Aligned_cols=75  Identities=25%  Similarity=0.496  Sum_probs=65.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|...+ +..+|+|.+.... ...+.+.+|+.++.+++|+|++++++++...+..+++|||+++|
T Consensus        12 ~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (261)
T cd05072          12 KKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKG   86 (261)
T ss_pred             eecCCcCCceEEEEEecC-CceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCC
Confidence            789999999999999764 6789999986543 23568999999999999999999999999889999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.97  E-value=2.3e-09  Score=93.94  Aligned_cols=77  Identities=26%  Similarity=0.423  Sum_probs=68.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+........+.+.+|+.++.+++|+|++++.+.|...+..++|+||+++|
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~  101 (293)
T cd06647          25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGG  101 (293)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCC
Confidence            78999999999999887678899999987554445677899999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.96  E-value=1.5e-09  Score=92.81  Aligned_cols=77  Identities=23%  Similarity=0.314  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++.+++|+||+++++.+......++|+||+++|
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (258)
T cd05578           6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGG   85 (258)
T ss_pred             EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCC
Confidence            7899999999999998877899999999754   2245678999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.96  E-value=3.9e-09  Score=92.93  Aligned_cols=77  Identities=21%  Similarity=0.305  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..|++|.+....   ......+.+|+.++..++|+||+++++.+...+..+|||||+++|
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~   86 (305)
T cd05609           7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGG   86 (305)
T ss_pred             eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence            78999999999999998888999999987652   233567889999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=4.7e-10  Score=103.00  Aligned_cols=77  Identities=26%  Similarity=0.393  Sum_probs=69.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+.|.||.+.-...+..||||++.......++-.++|+.+|...+|+|||+++..+...+++|+|||||++|
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~gg  355 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGG  355 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCC
Confidence            67999999999999887778999999997765555566889999999999999999999988899999999999987

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=4.4e-09  Score=89.92  Aligned_cols=77  Identities=29%  Similarity=0.434  Sum_probs=69.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+........+.+.+|+.++.+++|+|+++++|++.....++++|||+++|
T Consensus         9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~   85 (262)
T cd06613           9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGG   85 (262)
T ss_pred             EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCC
Confidence            78999999999999987778899999998765556778999999999999999999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.96  E-value=2.2e-09  Score=92.09  Aligned_cols=76  Identities=34%  Similarity=0.514  Sum_probs=65.3

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||.+...+ +..+|+|.+.... ....+|.+|+.++.+++|+||++++++|...+..+++|||+++|
T Consensus         9 ~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05113           9 LKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG   84 (256)
T ss_pred             eeEecCcccceEEEEEecC-CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence            3789999999999998764 4579999987543 23467999999999999999999999999888999999999865

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.96  E-value=2.1e-09  Score=92.44  Aligned_cols=77  Identities=25%  Similarity=0.403  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..++||.+...   ......+|.+|+.++.+++|+||+++++++...+..+++|||+++|
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~   87 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG   87 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCC
Confidence            6899999999999998777899999988643   2334568999999999999999999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.96  E-value=2.9e-09  Score=94.47  Aligned_cols=77  Identities=25%  Similarity=0.362  Sum_probs=64.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcC-CCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....|..||+|.++...   ......+..|..++.. ++|+||+++++++...+.++|||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            36999999999999998888999999997541   2234556778887765 4899999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (316)
T cd05620          81 G   81 (316)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.96  E-value=2.1e-09  Score=93.78  Aligned_cols=77  Identities=30%  Similarity=0.546  Sum_probs=66.0

Q ss_pred             ceeeeccCceEEEEEEcCC-----CceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTS-----GLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....     ...+|+|.+... ......++.+|+.++.++ +|+|+++++++|...+..+++|||
T Consensus        18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~   97 (293)
T cd05053          18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEY   97 (293)
T ss_pred             eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEe
Confidence            7899999999999987532     367999998764 344456799999999999 899999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        98 ~~~~  101 (293)
T cd05053          98 AAHG  101 (293)
T ss_pred             CCCC
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.96  E-value=2.4e-09  Score=93.44  Aligned_cols=77  Identities=29%  Similarity=0.551  Sum_probs=67.2

Q ss_pred             ceeeeccCceEEEEEEc-----CCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++...     ..+..+|+|.+........+.+.+|+.++.+++|+||+++.++|...+..++||||++
T Consensus        11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   90 (288)
T cd05093          11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK   90 (288)
T ss_pred             cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence            78999999999999752     2346689999977666667789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        91 ~~   92 (288)
T cd05093          91 HG   92 (288)
T ss_pred             CC
Confidence            65

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.96  E-value=2.5e-09  Score=91.55  Aligned_cols=86  Identities=24%  Similarity=0.346  Sum_probs=73.8

Q ss_pred             cChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          184 FSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       184 ~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      ++++|...     ...||.|+||+|...+.+.+|...|+|+++...   ....+...+|..+|..+.||.+++|.+.|.+
T Consensus        41 ~~l~dfe~-----~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d  115 (355)
T KOG0616|consen   41 YSLQDFER-----LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD  115 (355)
T ss_pred             cchhhhhh-----eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence            56655432     268999999999999998889999999997663   2335567899999999999999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      .+.++|||||+++|
T Consensus       116 ~~~lymvmeyv~GG  129 (355)
T KOG0616|consen  116 NSNLYMVMEYVPGG  129 (355)
T ss_pred             CCeEEEEEeccCCc
Confidence            99999999999987

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.96  E-value=1.8e-09  Score=94.84  Aligned_cols=77  Identities=25%  Similarity=0.336  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||++....++..+|+|.+........+.+.+|+.++..++|+|++++++.|...+..++++||+++|
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~  103 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG  103 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence            46999999999999987778999999997654444667899999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.96  E-value=2.4e-09  Score=92.21  Aligned_cols=76  Identities=30%  Similarity=0.472  Sum_probs=64.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeC------CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK------QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~------~~~~LV~Ey  270 (274)
                      +.||+|+||.||+|.....+..+|+|.+.... ....++.+|+.++.++ +|+|++++.++|...      ...+++|||
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~   90 (272)
T cd06637          12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF   90 (272)
T ss_pred             HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence            68999999999999998888999999986543 3345788999999998 799999999998753      357999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        91 ~~~~   94 (272)
T cd06637          91 CGAG   94 (272)
T ss_pred             CCCC
Confidence            9875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.96  E-value=3.1e-09  Score=94.59  Aligned_cols=79  Identities=24%  Similarity=0.319  Sum_probs=66.0

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEecc
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      |...||+|+||.||++....++..||+|.+...   .....+.+..|..++..+. |++|+++.+++...+.++|||||+
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~   83 (323)
T cd05615           4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYV   83 (323)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCC
Confidence            447899999999999998888899999999754   2233456888999888875 577888999998889999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        84 ~~g   86 (323)
T cd05615          84 NGG   86 (323)
T ss_pred             CCC
Confidence            876

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.95  E-value=3.5e-09  Score=91.85  Aligned_cols=76  Identities=32%  Similarity=0.592  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....|.    .+|+|.+.... .....++.+|+.++.+++|+|+++++++|.. ...++|+||++
T Consensus        13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   91 (279)
T cd05057          13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMP   91 (279)
T ss_pred             ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCC
Confidence            789999999999999765443    58999887653 4456789999999999999999999999987 78899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        92 ~g   93 (279)
T cd05057          92 LG   93 (279)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.95  E-value=4.1e-09  Score=90.23  Aligned_cols=77  Identities=31%  Similarity=0.494  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..+++|.+.....  ...+++.+|+.++.+++|+||+++++.+...+..++|+||+++|
T Consensus         6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (264)
T cd06626           6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG   84 (264)
T ss_pred             eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence            689999999999999877789999999976533  46778999999999999999999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.95  E-value=4.9e-09  Score=90.15  Aligned_cols=77  Identities=29%  Similarity=0.464  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      +.||+|+||.||++...+.+..||+|.+...     .....+.+.+|+.++.+++|+||+++.+++...  ..+++++||
T Consensus         8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~   87 (265)
T cd06652           8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEH   87 (265)
T ss_pred             eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEe
Confidence            7899999999999998888899999988532     123456788999999999999999999988664  457899999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        88 ~~~~   91 (265)
T cd06652          88 MPGG   91 (265)
T ss_pred             cCCC
Confidence            9875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.95  E-value=1.5e-09  Score=94.15  Aligned_cols=76  Identities=34%  Similarity=0.543  Sum_probs=66.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+....  ......+.+|+.++.+++|+||+++++++...+..++||||+++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (284)
T cd07860           6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ   83 (284)
T ss_pred             eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecccc
Confidence            68999999999999988778999999987542  22345788999999999999999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.95  E-value=4.9e-09  Score=89.68  Aligned_cols=77  Identities=26%  Similarity=0.442  Sum_probs=69.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|++|.||++.....+..+++|++..... ...+++.+|+..+.+++|+|++++.+++...+..++|+||+++|
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (264)
T cd06623           7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGG   84 (264)
T ss_pred             eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCC
Confidence            789999999999999987789999999976533 45678999999999999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.95  E-value=4e-09  Score=93.88  Aligned_cols=77  Identities=29%  Similarity=0.382  Sum_probs=63.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHH-HhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIV-SMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+....   .....++..|.. ++..++|+||+++.+++...+.+++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36999999999999998778899999997531   222345555554 46778999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (325)
T cd05602          81 G   81 (325)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.95  E-value=1.3e-09  Score=96.87  Aligned_cols=77  Identities=23%  Similarity=0.254  Sum_probs=69.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||.|.-|+||.+.+.+.+...|+|.+...   ++......+.|-++|+.+.||-|..|++.+......||+||||++|
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG  162 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG  162 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence            6799999999999999988899999999866   3444566788899999999999999999999999999999999998

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.95  E-value=3.7e-09  Score=90.83  Aligned_cols=78  Identities=32%  Similarity=0.509  Sum_probs=66.6

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCH---------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEE
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      ...||+|+||.||+|.....+..+|+|.+.....         ...+.+.+|+.++.+++|+||+++++++...+..+++
T Consensus         5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (267)
T cd06628           5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF   84 (267)
T ss_pred             cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence            3689999999999999877789999998864321         1235688999999999999999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      +||+++|
T Consensus        85 ~e~~~~~   91 (267)
T cd06628          85 LEYVPGG   91 (267)
T ss_pred             EEecCCC
Confidence            9999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.94  E-value=4.3e-09  Score=93.58  Aligned_cols=77  Identities=23%  Similarity=0.318  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .......+..|..++..+ +|++++++.+++...+.++|||||+++
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   85 (323)
T cd05616           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNG   85 (323)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCC
Confidence            7899999999999999877899999999754   223345677788888777 588999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        86 g   86 (323)
T cd05616          86 G   86 (323)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.94  E-value=3.2e-09  Score=93.57  Aligned_cols=76  Identities=29%  Similarity=0.446  Sum_probs=67.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.+...   .....+++.+|+.++.+++|+|++++.++|...+..++|+||+++
T Consensus        21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g   99 (307)
T cd06607          21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG   99 (307)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC
Confidence            7899999999999998877899999998643   234456799999999999999999999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.94  E-value=4.3e-09  Score=93.65  Aligned_cols=78  Identities=23%  Similarity=0.296  Sum_probs=65.9

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCC-CccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHR-NLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~-Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||++.....+..+|+|.+...   .....+.+..|..++..++|+ +|+++.+++...+.+++||||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence            37899999999999999877889999999754   233456788999999999765 58889999988899999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        85 ~g   86 (324)
T cd05587          85 GG   86 (324)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.94  E-value=3.7e-09  Score=91.69  Aligned_cols=76  Identities=32%  Similarity=0.513  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|++|.||+|.....+..+|+|.++..  .......+.+|+.++.+++|+|++++++++..++..++|+||++.
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (285)
T cd07861           6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSM   83 (285)
T ss_pred             eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCCC
Confidence            6899999999999999877899999998643  223346788999999999999999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.94  E-value=3.5e-09  Score=92.32  Aligned_cols=76  Identities=30%  Similarity=0.517  Sum_probs=66.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|++|.||++.....+..+|+|.+.... ......+.+|+.++.+++|+||+++.+++...+..++||||+++
T Consensus        11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (291)
T cd07844          11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT   87 (291)
T ss_pred             EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC
Confidence            78999999999999988778999999987542 22234578899999999999999999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=3.6e-09  Score=91.39  Aligned_cols=77  Identities=26%  Similarity=0.436  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||.|+||.||++....++..+|+|.+.... ......+.+|+.++.+++|+|++++.+++.....+++|+||+++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGG   84 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCC
Confidence            67999999999999998788999999987552 444567899999999999999999999999999999999999865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.94  E-value=2.4e-09  Score=92.93  Aligned_cols=77  Identities=32%  Similarity=0.538  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...+.+..|++|.++..  .......+.+|+.++.+++|+|+++++++|...+..++++||++++
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~   85 (288)
T cd07833           7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERT   85 (288)
T ss_pred             EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCC
Confidence            7899999999999999877899999998653  2334567899999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.94  E-value=3.5e-09  Score=91.22  Aligned_cols=78  Identities=28%  Similarity=0.545  Sum_probs=64.2

Q ss_pred             cceeeeccCceEEEEEEcCCCc--eEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEE
Q 045713          197 KELIGKGGFGKVYKGVLSTSGL--PIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLL  266 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~--~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~L  266 (274)
                      .+.||+|+||.||+|.....+.  .+|+|.++..  +....+.|.+|+.++.+++|+||++++++|...      ...++
T Consensus         4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   83 (272)
T cd05075           4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV   83 (272)
T ss_pred             ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence            3689999999999999875554  6899988754  345567899999999999999999999998542      24689


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      ++|||++|
T Consensus        84 v~e~~~~~   91 (272)
T cd05075          84 ILPFMKHG   91 (272)
T ss_pred             EEEeCCCC
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.94  E-value=3.7e-09  Score=92.46  Aligned_cols=74  Identities=27%  Similarity=0.420  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-----HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-----QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|....++..||+|.+.....     .....+..|+.++.+++|+|++++++++...+.+++||||+
T Consensus         6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   84 (298)
T cd07841           6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM   84 (298)
T ss_pred             eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence            689999999999999887789999999975522     23456778999999999999999999999989999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.94  E-value=1.1e-09  Score=94.17  Aligned_cols=77  Identities=30%  Similarity=0.559  Sum_probs=65.2

Q ss_pred             ceeeeccCceEEEEEEcCCC------ceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSG------LPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g------~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||+|...+..      ..+|+|.+.... .....+|.+|+.++.+++|+||++++++|...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36899999999999875322      679999886542 34467899999999999999999999999998999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        81 ~~~~   84 (269)
T cd05044          81 MEGG   84 (269)
T ss_pred             cCCC
Confidence            9875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.94  E-value=4.1e-09  Score=95.07  Aligned_cols=77  Identities=26%  Similarity=0.424  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~E  269 (274)
                      +.||+|+||.||++.....|..+|+|.+...  .......+.+|+.++.+++|+||+++++++...+      ..++|||
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  106 (359)
T cd07876          27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME  106 (359)
T ss_pred             EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEe
Confidence            7899999999999998877899999999653  3344567889999999999999999999986543      4799999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |++++
T Consensus       107 ~~~~~  111 (359)
T cd07876         107 LMDAN  111 (359)
T ss_pred             CCCcC
Confidence            99764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.94  E-value=2.6e-09  Score=93.59  Aligned_cols=77  Identities=29%  Similarity=0.489  Sum_probs=65.3

Q ss_pred             ceeeeccCceEEEEEEc----------------CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          198 ELIGKGGFGKVYKGVLS----------------TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~----------------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      +.||+|+||.||++...                ..+..+|+|.+... ......+|.+|+.++.+++|+|++++++++..
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~   90 (296)
T cd05095          11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCIT   90 (296)
T ss_pred             eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence            78999999999998532                12357999999765 34456789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      .+..+++|||+++|
T Consensus        91 ~~~~~lv~e~~~~~  104 (296)
T cd05095          91 SDPLCMITEYMENG  104 (296)
T ss_pred             CCccEEEEEeCCCC
Confidence            99999999999865

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.93  E-value=1.8e-09  Score=103.64  Aligned_cols=77  Identities=26%  Similarity=0.407  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEE-Ee---C---CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYC-RR---K---QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~-~~---~---~~~~LV~E  269 (274)
                      +.|.+|||+.||.+.....|..+|+|++-..+....+...+|+.+|.+|+ |+|||.+++.+ ..   .   -+.+|+||
T Consensus        43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmE  122 (738)
T KOG1989|consen   43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLME  122 (738)
T ss_pred             EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehh
Confidence            68999999999999998767999999998778888899999999999996 99999999932 11   1   36899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus       123 yC~gg  127 (738)
T KOG1989|consen  123 YCKGG  127 (738)
T ss_pred             hccCC
Confidence            99965

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=2.5e-09  Score=96.97  Aligned_cols=77  Identities=25%  Similarity=0.384  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC----CH-HhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD----SE-QWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|.||+|+.|.....+..||+|.+...    .. ...+...+|+.++.+++ ||||+++..++.....+++||||+
T Consensus        23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~  102 (370)
T KOG0583|consen   23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYC  102 (370)
T ss_pred             eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEec
Confidence            7899999999999998877899999977653    11 22344557999999999 999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      .+|
T Consensus       103 ~gG  105 (370)
T KOG0583|consen  103 SGG  105 (370)
T ss_pred             CCc
Confidence            886

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.93  E-value=3.2e-09  Score=91.69  Aligned_cols=77  Identities=27%  Similarity=0.440  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCC-----CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTS-----GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....     +..+|+|.+... ......+|.+|+.++..++|+|+++++|++......++||||+
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   91 (277)
T cd05032          12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELM   91 (277)
T ss_pred             eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecC
Confidence            7899999999999987532     378999998755 3345668999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        92 ~~~   94 (277)
T cd05032          92 AKG   94 (277)
T ss_pred             CCC
Confidence            865

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.93  E-value=4e-09  Score=91.40  Aligned_cols=76  Identities=24%  Similarity=0.319  Sum_probs=63.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHH-hcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVS-MGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~-l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....+|..||+|+++.. ......++..|+.. +..++|+|+++++++|...+..++++|||++
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~   84 (283)
T cd06617           7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDT   84 (283)
T ss_pred             EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcc
Confidence            7899999999999999888999999999754 22334566677765 5556899999999999999999999999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.93  E-value=3.7e-09  Score=91.61  Aligned_cols=75  Identities=27%  Similarity=0.361  Sum_probs=64.8

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....|..+|+|.+....   ......+..|+.++.+++|+|++++.+++...+..++|+||+++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            689999999999988778999999986532   223456788999999999999999999999999999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.93  E-value=3.9e-09  Score=89.87  Aligned_cols=76  Identities=36%  Similarity=0.581  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...+ +..||+|.+.... ......|.+|+.++.+++|+||+++++++......++|+||+++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            368999999999999877 8999999987653 335678999999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.93  E-value=2.5e-09  Score=93.70  Aligned_cols=77  Identities=26%  Similarity=0.356  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||++.....+..+|+|.+........+.+.+|+..+.+++|+|++++++.|...+..++||||+++|
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~  104 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG  104 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence            56999999999999987778999999997655555677999999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=3.7e-09  Score=94.93  Aligned_cols=77  Identities=25%  Similarity=0.344  Sum_probs=69.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||.|..+.||+|.....+..||||++.-+. .....+..+|+..|+-++||||++....|..+.++|+||.||..|
T Consensus        32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~G  109 (516)
T KOG0582|consen   32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGG  109 (516)
T ss_pred             EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCC
Confidence            78999999999999987778999999998663 334688999999999999999999999999999999999999887

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.93  E-value=3.6e-09  Score=90.75  Aligned_cols=77  Identities=22%  Similarity=0.300  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+... .....+++.+|+.++.+++|+||+++.+.|...+..++++||++++
T Consensus         7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (265)
T cd06605           7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGG   84 (265)
T ss_pred             HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCC
Confidence            6799999999999999877899999999765 3455678999999999999999999999999999999999999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.93  E-value=6.4e-09  Score=88.59  Aligned_cols=77  Identities=18%  Similarity=0.281  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...  .....+.+.+|+.++.+++|+|++++.+.+...+..++|+||+++|
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08220           6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG   84 (256)
T ss_pred             EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence            7899999999999998777899999998754  3344678999999999999999999999999899999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.93  E-value=2.4e-09  Score=92.92  Aligned_cols=77  Identities=31%  Similarity=0.529  Sum_probs=65.5

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|....     .+..||+|.++... ......|..|+.++.+++|+||++++++|...+..++++||+
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~   90 (283)
T cd05091          11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYC   90 (283)
T ss_pred             HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcC
Confidence            679999999999998743     24789999997553 334567899999999999999999999999999999999998


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        91 ~~~   93 (283)
T cd05091          91 SHS   93 (283)
T ss_pred             CCC
Confidence            754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.93  E-value=3.7e-09  Score=90.32  Aligned_cols=76  Identities=34%  Similarity=0.558  Sum_probs=65.3

Q ss_pred             ceeeeccCceEEEEEEcC-CC--ceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST-SG--LPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-~g--~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|++|.||++.... .+  ..+|+|.+..... ...++|.+|+.++.+++|+||+++++.+.. ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998754 23  3699999987654 567889999999999999999999999988 889999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        80 ~   80 (257)
T cd05040          80 G   80 (257)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.92  E-value=4.5e-09  Score=90.93  Aligned_cols=78  Identities=32%  Similarity=0.568  Sum_probs=66.1

Q ss_pred             cceeeeccCceEEEEEEcC----CCceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVLST----SGLPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~E  269 (274)
                      .+.||+|+||.||++.+..    .+..+|+|.++.... ...++|.+|+.++.+++|+||+++.++|..  ....++++|
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   88 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME   88 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence            3789999999999998753    367899999976533 356789999999999999999999999987  557899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        89 ~~~~~   93 (284)
T cd05038          89 YLPSG   93 (284)
T ss_pred             cCCCC
Confidence            99865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.92  E-value=7.2e-09  Score=88.78  Aligned_cols=77  Identities=26%  Similarity=0.386  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+.... ....+.+.+|+..+..++|+|++++.+.+...+..++++||+++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~   84 (267)
T cd06610           7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGG   84 (267)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCC
Confidence            78999999999999987778899999997542 335678999999999999999999999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.92  E-value=4.3e-09  Score=91.44  Aligned_cols=78  Identities=31%  Similarity=0.561  Sum_probs=67.8

Q ss_pred             cceeeeccCceEEEEEEc-----CCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          197 KELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ...||+|+||.||++...     ..+..+|+|.+..........|.+|+.++.+++|+||+++++++...+..++++||+
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   89 (280)
T cd05092          10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM   89 (280)
T ss_pred             ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence            378999999999999642     235689999988766666788999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        90 ~~~   92 (280)
T cd05092          90 RHG   92 (280)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.92  E-value=4e-09  Score=89.97  Aligned_cols=78  Identities=32%  Similarity=0.469  Sum_probs=67.5

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHh--HHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW--MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.....+..+|+|.+.......  .....+|+..+.+++|+||+++++++......++||||+++|
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~   83 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG   83 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence            368999999999999999888899999998764332  234566999999999999999999999999999999999863

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=5.1e-09  Score=90.54  Aligned_cols=77  Identities=27%  Similarity=0.515  Sum_probs=67.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCC---CCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALR---HRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~---H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....+..+|+|.+... ......++.+|+.++.+++   |+|++++.++|......++||||+++
T Consensus         7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06917           7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG   86 (277)
T ss_pred             hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence            6799999999999998777899999998754 3344567889999998886   99999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        87 ~   87 (277)
T cd06917          87 G   87 (277)
T ss_pred             C
Confidence            5

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.92  E-value=3.9e-09  Score=92.60  Aligned_cols=78  Identities=28%  Similarity=0.560  Sum_probs=66.4

Q ss_pred             cceeeeccCceEEEEEEcCCCc--eEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGL--PIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||++.....+.  .+++|.++.. .....+.|.+|+.++.++ +|+||+++.++|...+..++++||++
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~   86 (297)
T cd05089           7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP   86 (297)
T ss_pred             eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence            3789999999999999876553  4789988753 344567899999999999 79999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        87 ~~   88 (297)
T cd05089          87 YG   88 (297)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=2.5e-10  Score=102.95  Aligned_cols=75  Identities=27%  Similarity=0.430  Sum_probs=64.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHH-hHHHHHHHHHHhcCCC-CCCccceeeEEEeCC-eEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQ-ELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~-~~~LV~Ey~~  272 (274)
                      +.||.|.||.||+|+-...|..||||+++..-.. ..-.=++|+..|.+|+ |+||++|..++++.+ .+++|||||+
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md   93 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD   93 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh
Confidence            6799999999999999888999999999765211 1222478999999998 999999999999888 8999999996

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.92  E-value=2.8e-09  Score=92.04  Aligned_cols=77  Identities=25%  Similarity=0.490  Sum_probs=65.6

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccCCHH-hHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ..||+|+||.||++....     ....+++|.+...... ...+|.+|+.++.+++|+||++++++|...+..++|+||+
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   90 (275)
T cd05046          11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT   90 (275)
T ss_pred             eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence            689999999999998642     2467999988655333 4678999999999999999999999999888999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        91 ~~~   93 (275)
T cd05046          91 DLG   93 (275)
T ss_pred             CCC
Confidence            865

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.92  E-value=4.5e-09  Score=91.75  Aligned_cols=77  Identities=29%  Similarity=0.476  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCC----------------CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTS----------------GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~----------------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      +.||+|+||.||++.....                +..||+|.+... ......+|.+|+.++.+++|+|+++++++|..
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   90 (296)
T cd05051          11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTV   90 (296)
T ss_pred             ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEec
Confidence            7899999999999887532                245899999765 34556789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      .+..++++||+++|
T Consensus        91 ~~~~~lv~e~~~~~  104 (296)
T cd05051          91 DPPLCMIMEYMENG  104 (296)
T ss_pred             CCCcEEEEecCCCC
Confidence            89999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.92  E-value=4.2e-09  Score=91.92  Aligned_cols=90  Identities=30%  Similarity=0.392  Sum_probs=73.7

Q ss_pred             cChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEe
Q 045713          184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRR  260 (274)
Q Consensus       184 ~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~  260 (274)
                      +.+.++..++.+|.  +.||+|+||.||++.....+..+|+|.+.... ....++.+|+.++.++ +|+|+++++++|..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            45567777788887  78999999999999998788999999986532 2245677899999988 89999999999975


Q ss_pred             C-----CeEEEEEeccCCC
Q 045713          261 K-----QELLLVYNYMHNK  274 (274)
Q Consensus       261 ~-----~~~~LV~Ey~~~G  274 (274)
                      .     +..++|+||+++|
T Consensus        91 ~~~~~~~~~~lv~ey~~~~  109 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGG  109 (291)
T ss_pred             ccccCCCeeEEEEEECCCC
Confidence            4     3589999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.92  E-value=4.6e-09  Score=92.50  Aligned_cols=76  Identities=28%  Similarity=0.486  Sum_probs=66.0

Q ss_pred             ceeeeccCceEEEEEEcC--CCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLST--SGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      ..||+|+||.||+|....  .+..+|+|.+....   ......+.+|+.++.+++|+|++++.++|...  ..+++||||
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   85 (316)
T cd07842           6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY   85 (316)
T ss_pred             EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence            679999999999999876  68999999997632   33346778899999999999999999999988  789999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      +++
T Consensus        86 ~~~   88 (316)
T cd07842          86 AEH   88 (316)
T ss_pred             CCc
Confidence            875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.92  E-value=3.2e-09  Score=92.94  Aligned_cols=76  Identities=36%  Similarity=0.578  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC----------eEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ----------ELL  265 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~----------~~~  265 (274)
                      +.||+|+||.||+|.....+..||+|.++...  ......+.+|+.++.+++|+|++++.+++....          .++
T Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   92 (302)
T cd07864          13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFY   92 (302)
T ss_pred             eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEE
Confidence            78999999999999998778999999997542  223456788999999999999999999997654          689


Q ss_pred             EEEeccCC
Q 045713          266 LVYNYMHN  273 (274)
Q Consensus       266 LV~Ey~~~  273 (274)
                      ||+||+++
T Consensus        93 lv~e~~~~  100 (302)
T cd07864          93 LVFEYMDH  100 (302)
T ss_pred             EEEcccCc
Confidence            99999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.92  E-value=7.3e-09  Score=88.96  Aligned_cols=76  Identities=30%  Similarity=0.580  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|... .+..+|+|.+....      ......+.+|+.++.+++|+||+++.++|...+..++++||+
T Consensus         6 ~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (265)
T cd06631           6 EVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV   84 (265)
T ss_pred             ceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence            67999999999999875 47889999986431      223456889999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        85 ~~~   87 (265)
T cd06631          85 PGG   87 (265)
T ss_pred             CCC
Confidence            875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.91  E-value=4.5e-09  Score=91.83  Aligned_cols=76  Identities=32%  Similarity=0.503  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|.+|.||+|....++..+|+|.+....  ......+.+|+.++.+++|+|++++.+++...+..++|+||++.
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   85 (294)
T PLN00009          8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL   85 (294)
T ss_pred             EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc
Confidence            78999999999999988778999999986542  23346788999999999999999999999999999999999864

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.91  E-value=5.8e-09  Score=88.77  Aligned_cols=78  Identities=37%  Similarity=0.698  Sum_probs=68.3

Q ss_pred             cceeeeccCceEEEEEEcCCC----ceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          197 KELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g----~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .+.||+|+||.||++.....+    ..+|+|.+..... ...+.+..|+..+.+++|+|++++++++...+..+++|||+
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~   83 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM   83 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence            378999999999999987655    8899999976533 25678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        84 ~~~   86 (258)
T smart00219       84 EGG   86 (258)
T ss_pred             CCC
Confidence            864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.91  E-value=5.7e-09  Score=91.20  Aligned_cols=77  Identities=27%  Similarity=0.522  Sum_probs=67.0

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++....     .+..+++|.+........+.+.+|+.++.+++|+||+++.++|...+..++||||++
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   90 (291)
T cd05094          11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK   90 (291)
T ss_pred             eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCC
Confidence            789999999999997532     245689999877666666789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        91 ~~   92 (291)
T cd05094          91 HG   92 (291)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.91  E-value=4.7e-09  Score=89.34  Aligned_cols=77  Identities=38%  Similarity=0.650  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCC---CceEEEEEEccCCHH-hHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTS---GLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....   +..+++|.+...... ..+.+.+|+..+.+++|+|++++++++......++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            3689999999999998755   789999999866332 467899999999999999999999999998999999999976


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 ~   81 (262)
T cd00192          81 G   81 (262)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.90  E-value=4.5e-09  Score=90.08  Aligned_cols=79  Identities=27%  Similarity=0.447  Sum_probs=65.3

Q ss_pred             hcCccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          193 TKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       193 t~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +-.+.+.||+|+||.||++...+ +..+|+|.+..... ...+|.+|+.++.+++|+|++++.+++ ..+..++++||++
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~   83 (260)
T cd05067           7 TLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME   83 (260)
T ss_pred             HceeeeeeccCccceEEeeecCC-CceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence            33445889999999999998764 68899999976432 346799999999999999999999886 4567899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        84 ~~   85 (260)
T cd05067          84 NG   85 (260)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=4.6e-10  Score=103.78  Aligned_cols=76  Identities=29%  Similarity=0.437  Sum_probs=67.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||.|+||.||-+....+...||||.++-.   +.....+.+.|+..|.+++|||++...||+......|||||||-+
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG  110 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG  110 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc
Confidence            5699999999999998777889999999755   344567899999999999999999999999999999999999854

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.90  E-value=8.4e-09  Score=91.41  Aligned_cols=76  Identities=26%  Similarity=0.428  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....++..+|+|.+...   ......++.+|+.++.+++|+|+++++++|......+|||||+++
T Consensus        31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g  109 (317)
T cd06635          31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG  109 (317)
T ss_pred             heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC
Confidence            6799999999999998777899999998743   233456789999999999999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.90  E-value=5e-09  Score=89.73  Aligned_cols=75  Identities=28%  Similarity=0.457  Sum_probs=62.6

Q ss_pred             eeeeccCceEEEEEE--cCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVL--STSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~--~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||+|.+  ...+..+|+|.++..  .....++|.+|+.++.+++|+||++++|+|. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999975  344688999998654  3345678999999999999999999999985 45679999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.90  E-value=5e-09  Score=89.25  Aligned_cols=75  Identities=24%  Similarity=0.490  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.++....  .+++.+|+.++.+++|+|++++.+++......++++||++++
T Consensus         9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   83 (256)
T cd06612           9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAG   83 (256)
T ss_pred             hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCC
Confidence            689999999999999987788999999875432  678999999999999999999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=4.6e-10  Score=100.31  Aligned_cols=77  Identities=26%  Similarity=0.468  Sum_probs=70.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|.||.||||.....+..||+|.+..+ ......+.++|+.++.+++|+||.+.+|.+..+..++++||||.+|
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gG   96 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGG   96 (467)
T ss_pred             hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCc
Confidence            6899999999999999888999999999865 4455778999999999999999999999999999999999999887

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.89  E-value=9.2e-09  Score=100.43  Aligned_cols=77  Identities=22%  Similarity=0.323  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.++..   .......+..|+.++..++|+||+++++++...+.++|||||+++|
T Consensus        10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~   89 (669)
T cd05610          10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGG   89 (669)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCC
Confidence            7899999999999999877899999999754   2334567899999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.89  E-value=5e-09  Score=90.32  Aligned_cols=77  Identities=26%  Similarity=0.431  Sum_probs=64.2

Q ss_pred             cceeeeccCceEEEEEEcCC---CceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTS---GLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|...+.   ...+++|...... ....+.|.+|+.++.+++|+|+++++++|.. +..++||||++
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~   89 (270)
T cd05056          11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAP   89 (270)
T ss_pred             eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCC
Confidence            47899999999999987532   3568999887653 5556789999999999999999999999864 56789999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        90 ~~   91 (270)
T cd05056          90 LG   91 (270)
T ss_pred             CC
Confidence            65

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.89  E-value=8e-09  Score=88.91  Aligned_cols=77  Identities=27%  Similarity=0.425  Sum_probs=64.6

Q ss_pred             ceeeeccCceEEEEEEcC-CCceEEEEEEccC----------CHHhHHHHHHHHHHhcC-CCCCCccceeeEEEeCCeEE
Q 045713          198 ELIGKGGFGKVYKGVLST-SGLPIAVKKISHD----------SEQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRRKQELL  265 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-~g~~vAvK~l~~~----------~~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~~~~~~  265 (274)
                      +.||+|+||.||++.... .+..+|+|.+...          ......++.+|+.++.+ ++|+|+++++++|...+..+
T Consensus         6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   85 (269)
T cd08528           6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLY   85 (269)
T ss_pred             hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEE
Confidence            679999999999999876 5688999988532          22335668889988875 79999999999999999999


Q ss_pred             EEEeccCCC
Q 045713          266 LVYNYMHNK  274 (274)
Q Consensus       266 LV~Ey~~~G  274 (274)
                      ++|||+++|
T Consensus        86 lv~e~~~~~   94 (269)
T cd08528          86 IVMDLIEGA   94 (269)
T ss_pred             EEEecCCCC
Confidence            999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.89  E-value=5.3e-09  Score=93.37  Aligned_cols=79  Identities=25%  Similarity=0.509  Sum_probs=65.8

Q ss_pred             ccceeeeccCceEEEEEEcC-------CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEE
Q 045713          196 FKELIGKGGFGKVYKGVLST-------SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~-------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~L  266 (274)
                      +.+.||+|+||.||++....       ....+|+|.++.. .....+++.+|+.++.++ +|+||++++++|...+.+++
T Consensus        16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   95 (334)
T cd05100          16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV   95 (334)
T ss_pred             ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence            34789999999999997532       1246899988754 344567899999999999 89999999999999999999


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      ++||+++|
T Consensus        96 v~e~~~~g  103 (334)
T cd05100          96 LVEYASKG  103 (334)
T ss_pred             EEecCCCC
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.89  E-value=8.4e-09  Score=93.11  Aligned_cols=74  Identities=16%  Similarity=0.141  Sum_probs=58.3

Q ss_pred             ceeeeccCceEEEEEEcC-CCceEEEEEEccC-----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-SGLPIAVKKISHD-----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|.... .+..+|||++...     .....+.|.+|+.+|.+++|+|+++.+..   .+..+|||||+
T Consensus        24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~~  100 (365)
T PRK09188         24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGWT  100 (365)
T ss_pred             cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEcc
Confidence            789999999999998764 5677899987533     22335679999999999999999964432   25679999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      +++
T Consensus       101 ~G~  103 (365)
T PRK09188        101 EGV  103 (365)
T ss_pred             CCC
Confidence            864

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.89  E-value=6.3e-09  Score=89.22  Aligned_cols=75  Identities=20%  Similarity=0.290  Sum_probs=66.0

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||.|+||.||++.....+..+++|.+....   ....+.+.+|+.++.+++|+|++++++.+......++++||+++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            689999999999998778999999987542   234567999999999999999999999999999999999999865

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.88  E-value=7.5e-09  Score=88.66  Aligned_cols=77  Identities=32%  Similarity=0.537  Sum_probs=62.7

Q ss_pred             ceeeeccCceEEEEEEcC---CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLST---SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~---~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|...+   ....+|+|.+... .....+.+..|+.++..++|+|+++++++|.. .+..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            368999999999998643   2357999998643 34556789999999999999999999998864 445799999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        81 ~~   82 (262)
T cd05058          81 HG   82 (262)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.88  E-value=6.7e-09  Score=103.49  Aligned_cols=77  Identities=25%  Similarity=0.343  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      ..||+|+||.||++.....+..+|+|.+...  .......|..|+.++.+|+|+|||++++++..  .+.++|||||+++
T Consensus        19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~g   98 (1021)
T PTZ00266         19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDA   98 (1021)
T ss_pred             EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCC
Confidence            7899999999999999877889999998754  34456789999999999999999999998854  3568999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        99 G   99 (1021)
T PTZ00266         99 G   99 (1021)
T ss_pred             C
Confidence            5

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.88  E-value=1.1e-08  Score=89.25  Aligned_cols=77  Identities=26%  Similarity=0.368  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|++|.||++.....+..+++|.+........+.+.+|+.++.+++|+|++++++++...+..++++||+++|
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            68999999999999987778999999987655555667899999999999999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.88  E-value=6.6e-09  Score=88.95  Aligned_cols=75  Identities=31%  Similarity=0.526  Sum_probs=65.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...+ +..+|+|.+.... ....++.+|+.++.+++|+|++++++++......+++|||+++|
T Consensus        12 ~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   86 (261)
T cd05034          12 RKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKG   86 (261)
T ss_pred             eeeccCcceEEEEEEEcC-CceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCC
Confidence            789999999999999764 5789999997543 23567999999999999999999999999888999999999865

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=2.8e-10  Score=105.91  Aligned_cols=77  Identities=27%  Similarity=0.413  Sum_probs=70.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||.|+||+||++..++.+...|.|.+...+.....+|+-|+++|+.+.||+||+|++.+.-.+.++|+.|||.+|
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG  114 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG  114 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence            46899999999999988777788899998777788899999999999999999999999888899999999999988

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.87  E-value=8.5e-09  Score=88.23  Aligned_cols=76  Identities=33%  Similarity=0.528  Sum_probs=63.1

Q ss_pred             ceeeeccCceEEEEEEcCCC---ceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....+   ..+|+|.+..... ...+++.+|+.++.+++|+|+++++++|. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            36899999999999874433   7899999976533 34678999999999999999999999886 5568999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        80 ~   80 (257)
T cd05060          80 G   80 (257)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.87  E-value=8.8e-09  Score=89.26  Aligned_cols=78  Identities=23%  Similarity=0.456  Sum_probs=65.5

Q ss_pred             cceeeeccCceEEEEEEcC----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVLST----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey  270 (274)
                      .++||+|+||.||+|....    .+..|++|.+... .......+.+|+.++.+++|+|+++++++|.. ....++++||
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~   90 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY   90 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence            3789999999999999864    2578999998755 34456779999999999999999999999877 4668999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        91 ~~~~   94 (280)
T cd05043          91 MNWG   94 (280)
T ss_pred             CCCC
Confidence            9865

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.87  E-value=4.3e-09  Score=95.16  Aligned_cols=77  Identities=26%  Similarity=0.334  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH---------H-----hHHHHHHHHHHhcCCCCCCccceeeEEEeC--
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---------Q-----WMKEFVSEIVSMGALRHRNLVQLHGYCRRK--  261 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---------~-----~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--  261 (274)
                      ..||+|.||.|-++.....+..+|||++.....         .     ..+...+|+.+|.+++|+|+|+|+-+-.+.  
T Consensus       103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s  182 (576)
T KOG0585|consen  103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPES  182 (576)
T ss_pred             hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCccc
Confidence            679999999999999888899999999964310         1     124788999999999999999999887653  


Q ss_pred             CeEEEEEeccCCC
Q 045713          262 QELLLVYNYMHNK  274 (274)
Q Consensus       262 ~~~~LV~Ey~~~G  274 (274)
                      +.+|||+|||..|
T Consensus       183 ~~~YlVley~s~G  195 (576)
T KOG0585|consen  183 DKLYLVLEYCSKG  195 (576)
T ss_pred             CceEEEEEeccCC
Confidence            5689999999876

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.87  E-value=5.3e-09  Score=89.32  Aligned_cols=75  Identities=23%  Similarity=0.338  Sum_probs=66.2

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCCH---HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....|..+++|.+.....   ...+.+.+|+.++.+++|+|++++.+.+......++++||+++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence            5899999999999987789999999975432   45667899999999999999999999999899999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.87  E-value=1.5e-08  Score=87.30  Aligned_cols=77  Identities=29%  Similarity=0.514  Sum_probs=64.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..+++|.+...     .......+.+|+.++.+++|+||+++.+++...  ..+++++||
T Consensus         8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~   87 (266)
T cd06651           8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEY   87 (266)
T ss_pred             ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeC
Confidence            7899999999999998877899999998643     123356788999999999999999999988753  567899999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        88 ~~~~   91 (266)
T cd06651          88 MPGG   91 (266)
T ss_pred             CCCC
Confidence            9864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.86  E-value=8.9e-09  Score=89.61  Aligned_cols=76  Identities=30%  Similarity=0.444  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+..... ..+.+.+|+.++.+++|+|++++++.|...+..++++||+++|
T Consensus        25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~  100 (286)
T cd06614          25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGG  100 (286)
T ss_pred             HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCC
Confidence            689999999999999987789999999976544 4677899999999999999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.86  E-value=1.1e-08  Score=88.59  Aligned_cols=74  Identities=27%  Similarity=0.393  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++....+|..+++|.+....  ......+.+|+.++.+++|+|++++++++......++|+||+
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            68999999999999988778999999997553  334568999999999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.86  E-value=1.7e-08  Score=89.40  Aligned_cols=76  Identities=28%  Similarity=0.455  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....+..+++|.+...   .....+.+.+|+.++.+++|+|++++.++|......++||||+.+
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  105 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG  105 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC
Confidence            6799999999999998877899999998743   233446788999999999999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.86  E-value=9.8e-09  Score=90.45  Aligned_cols=78  Identities=26%  Similarity=0.488  Sum_probs=65.7

Q ss_pred             cceeeeccCceEEEEEEcC-------CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEE
Q 045713          197 KELIGKGGFGKVYKGVLST-------SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~-------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      .+.||+|+||.||++....       .+..+|+|.+... ......++..|+.++.++ +|+||++++++|...+..++|
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv  102 (307)
T cd05098          23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI  102 (307)
T ss_pred             eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            3789999999999997532       2356999999764 344566789999999999 799999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      +||+++|
T Consensus       103 ~e~~~~~  109 (307)
T cd05098         103 VEYASKG  109 (307)
T ss_pred             EecCCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.86  E-value=8.3e-09  Score=89.53  Aligned_cols=90  Identities=26%  Similarity=0.399  Sum_probs=72.1

Q ss_pred             cChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEe
Q 045713          184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRR  260 (274)
Q Consensus       184 ~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~  260 (274)
                      .++.++..+...|.  +.||+|+||.||++.....+..+|+|.+.... ....++..|+.++.++ +|+|++++.+++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            34555555666665  78999999999999998778999999986543 3345788899999998 69999999999853


Q ss_pred             ------CCeEEEEEeccCCC
Q 045713          261 ------KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ------~~~~~LV~Ey~~~G  274 (274)
                            ....+++|||+++|
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~  104 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAG  104 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCC
Confidence                  35689999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.86  E-value=5.8e-09  Score=97.93  Aligned_cols=77  Identities=25%  Similarity=0.395  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      .+||+|.||+|+.+.++..+..+|||.++.+   .....+..+.|-.++.-. +||.|++|++++...+.++.||||+.+
T Consensus       374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~G  453 (694)
T KOG0694|consen  374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAG  453 (694)
T ss_pred             EEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCC
Confidence            7999999999999999988999999999876   345566777787776655 699999999999999999999999988


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       454 g  454 (694)
T KOG0694|consen  454 G  454 (694)
T ss_pred             C
Confidence            7

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.86  E-value=1.1e-08  Score=90.04  Aligned_cols=78  Identities=27%  Similarity=0.530  Sum_probs=65.6

Q ss_pred             cceeeeccCceEEEEEEc-------CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEE
Q 045713          197 KELIGKGGFGKVYKGVLS-------TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~-------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      .+.||+|+||.||++...       ..+..+|+|.+... .....+++.+|+.++..+ +|+||++++++|...+..+++
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv   99 (304)
T cd05101          20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI   99 (304)
T ss_pred             cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEE
Confidence            378999999999999752       12357999998754 344567899999999999 899999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      |||+++|
T Consensus       100 ~e~~~~~  106 (304)
T cd05101         100 VEYASKG  106 (304)
T ss_pred             EecCCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.86  E-value=4.8e-09  Score=101.22  Aligned_cols=79  Identities=29%  Similarity=0.531  Sum_probs=68.1

Q ss_pred             ccceeeeccCceEEEEEEcC-------CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEE
Q 045713          196 FKELIGKGGFGKVYKGVLST-------SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~-------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~L  266 (274)
                      +.+.||+|.||+|++|.+..       ....||||.++.. .....+.+..|+.+|..+ +|+|++.|+|+|..++.+++
T Consensus       300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~  379 (609)
T KOG0200|consen  300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV  379 (609)
T ss_pred             ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence            34699999999999998641       1467999999866 345678999999999998 69999999999999999999


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      |.||+++|
T Consensus       380 v~Ey~~~G  387 (609)
T KOG0200|consen  380 IVEYAEHG  387 (609)
T ss_pred             EEEeccCC
Confidence            99999987

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.86  E-value=9.2e-09  Score=89.49  Aligned_cols=77  Identities=25%  Similarity=0.478  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEEc----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLS----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      +.||+|+||.||.+.+.    ..+..+|+|.+... .......+.+|+.++.+++|+|++++.++|...  ...++||||
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (284)
T cd05079          10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF   89 (284)
T ss_pred             eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEc
Confidence            67999999999999752    34688999998755 344457899999999999999999999999875  568999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        90 ~~g~   93 (284)
T cd05079          90 LPSG   93 (284)
T ss_pred             cCCC
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=1.3e-08  Score=90.02  Aligned_cols=77  Identities=26%  Similarity=0.371  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+....   ....+.+..|+.++.+++|+||+++++.+...+..++||||+++|
T Consensus         7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (316)
T cd05574           7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG   86 (316)
T ss_pred             eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence            68999999999999998778999999997652   234567999999999999999999999999999999999999764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=2e-08  Score=85.22  Aligned_cols=77  Identities=34%  Similarity=0.575  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|++|.||++.....+..+++|.+.....  .....+.+|+.++.+++|+|++++.+++...+..++++||++++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (254)
T cd06627           6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG   84 (254)
T ss_pred             eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence            789999999999999887788999999976632  45678999999999999999999999999999999999999764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.85  E-value=1.2e-08  Score=92.34  Aligned_cols=77  Identities=25%  Similarity=0.361  Sum_probs=64.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..+|||.+...  .....+.+.+|+.++..++|+||+++++++...      ...++|||
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e  109 (364)
T cd07875          30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME  109 (364)
T ss_pred             EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEe
Confidence            7899999999999998777899999999754  334456788999999999999999999987543      35799999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |++++
T Consensus       110 ~~~~~  114 (364)
T cd07875         110 LMDAN  114 (364)
T ss_pred             CCCCC
Confidence            99764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.85  E-value=7.7e-09  Score=92.29  Aligned_cols=85  Identities=22%  Similarity=0.378  Sum_probs=69.3

Q ss_pred             hHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CC
Q 045713          188 DLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQ  262 (274)
Q Consensus       188 el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~  262 (274)
                      ++...+++|.  +.||+|+||.||++.....+..+|+|++...  .....+.+.+|+.++.+++|+|++++.++|.. ..
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3444566665  7899999999999998877899999988643  22345678899999999999999999998865 45


Q ss_pred             eEEEEEeccC
Q 045713          263 ELLLVYNYMH  272 (274)
Q Consensus       263 ~~~LV~Ey~~  272 (274)
                      ..++++||+.
T Consensus        84 ~~~lv~e~~~   93 (328)
T cd07856          84 DIYFVTELLG   93 (328)
T ss_pred             cEEEEeehhc
Confidence            7899999985

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=1.1e-08  Score=87.85  Aligned_cols=82  Identities=28%  Similarity=0.392  Sum_probs=68.0

Q ss_pred             hhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCC------
Q 045713          192 ATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQ------  262 (274)
Q Consensus       192 at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~------  262 (274)
                      ++++|.  +.||+|+||.||++.....+..+++|.+..... ...+|.+|+.++.++ +|+|+++++++|....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            344454  789999999999999987788999999876543 346789999999998 6999999999997654      


Q ss_pred             eEEEEEeccCCC
Q 045713          263 ELLLVYNYMHNK  274 (274)
Q Consensus       263 ~~~LV~Ey~~~G  274 (274)
                      .+++||||+++|
T Consensus        83 ~~~lv~e~~~~~   94 (275)
T cd06608          83 QLWLVMELCGGG   94 (275)
T ss_pred             EEEEEEEcCCCC
Confidence            389999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.84  E-value=1e-08  Score=88.72  Aligned_cols=76  Identities=33%  Similarity=0.563  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+....  ......+.+|+.++.+++|+|++++.+++...  +..++|+||+++
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~   84 (287)
T cd07840           5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH   84 (287)
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc
Confidence            67999999999999998778999999997652  33456788999999999999999999999887  789999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.84  E-value=4.8e-10  Score=96.17  Aligned_cols=75  Identities=27%  Similarity=0.458  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|.+|.||++..+.+|..+|+|.+..++  +.++.+.|+.+|++++.+.+|+.+|.+.....+|+|||||--|
T Consensus        39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG  113 (502)
T KOG0574|consen   39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG  113 (502)
T ss_pred             HHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence            68999999999999999999999999987653  4678999999999999999999999999999999999999654

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.84  E-value=9.7e-09  Score=87.89  Aligned_cols=76  Identities=33%  Similarity=0.529  Sum_probs=64.9

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.... +..+|+|.+.... ....+|.+|+.++.+++|+|++++.+++...+..++|+||+++|
T Consensus         9 ~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05059           9 LKELGSGQFGVVHLGKWRG-KIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG   84 (256)
T ss_pred             hhhhccCCCceEEEeEecC-CccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence            4789999999999998764 5689999986532 22457889999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.84  E-value=8.8e-09  Score=88.35  Aligned_cols=76  Identities=25%  Similarity=0.500  Sum_probs=64.3

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.+.||+|+||.||++.... +..+++|.+.... .....|.+|+.++.+++|+|++++.+.+.. ...+++|||+++|
T Consensus        10 ~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~   85 (260)
T cd05073          10 LEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKG   85 (260)
T ss_pred             EEeEecCccceEEEEEEecC-CccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCC
Confidence            34789999999999998754 5679999887543 335679999999999999999999999877 7789999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.84  E-value=2e-08  Score=86.30  Aligned_cols=77  Identities=31%  Similarity=0.535  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..+|+|.+...     ..+....+.+|+.++.+++|+||+++++++...  ..+++++||
T Consensus         8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~   87 (264)
T cd06653           8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEY   87 (264)
T ss_pred             eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEe
Confidence            7899999999999998877899999987532     233456889999999999999999999998764  457899999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        88 ~~~~   91 (264)
T cd06653          88 MPGG   91 (264)
T ss_pred             CCCC
Confidence            9864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.84  E-value=1.7e-08  Score=86.12  Aligned_cols=77  Identities=31%  Similarity=0.425  Sum_probs=65.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+...  .....+.+..|+.++.+++|+|++++++++..  ....+++|||+++
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~   85 (265)
T cd08217           6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG   85 (265)
T ss_pred             eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence            6799999999999998877899999998753  34456778999999999999999999998764  3457999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        86 ~   86 (265)
T cd08217          86 G   86 (265)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.83  E-value=1.3e-08  Score=94.57  Aligned_cols=72  Identities=28%  Similarity=0.484  Sum_probs=59.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--------~~~~LV~E  269 (274)
                      +.||+|+||.||+|.....+..||||.+....    ....+|+.+|.+++|+||+++.+++...        ..+++|||
T Consensus        72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE  147 (440)
T PTZ00036         72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVME  147 (440)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEe
Confidence            78999999999999998778999999986542    2235699999999999999999876432        23679999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+++
T Consensus       148 ~~~~  151 (440)
T PTZ00036        148 FIPQ  151 (440)
T ss_pred             cCCc
Confidence            9975

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.83  E-value=2.3e-08  Score=84.79  Aligned_cols=77  Identities=30%  Similarity=0.516  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~  273 (274)
                      +.||+|++|.||+|.....+..+++|.+....  ....+.+.+|+..+.+++|+||+++++.+...  ...++++||+++
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~   85 (260)
T cd06606           6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG   85 (260)
T ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence            68999999999999998778999999987653  34567899999999999999999999999988  889999999975


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      +
T Consensus        86 ~   86 (260)
T cd06606          86 G   86 (260)
T ss_pred             C
Confidence            4

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.83  E-value=1.3e-08  Score=89.96  Aligned_cols=78  Identities=23%  Similarity=0.523  Sum_probs=65.2

Q ss_pred             cceeeeccCceEEEEEEc-------CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEE
Q 045713          197 KELIGKGGFGKVYKGVLS-------TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~-------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      .+.||+|+||.||++...       .....+|+|.++.. ......++.+|+.++.++ +|+||++++++|...+..+++
T Consensus        17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv   96 (314)
T cd05099          17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVI   96 (314)
T ss_pred             eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEE
Confidence            478999999999999752       22457999998754 344466799999999999 699999999999988899999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      +||+++|
T Consensus        97 ~e~~~~g  103 (314)
T cd05099          97 VEYAAKG  103 (314)
T ss_pred             EecCCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.82  E-value=7.6e-09  Score=97.26  Aligned_cols=82  Identities=18%  Similarity=0.443  Sum_probs=59.2

Q ss_pred             hcCcc--ceeeeccCceEEEEEEc----------------CCCceEEEEEEccCCHHhHHHHH--------------HHH
Q 045713          193 TKGFK--ELIGKGGFGKVYKGVLS----------------TSGLPIAVKKISHDSEQWMKEFV--------------SEI  240 (274)
Q Consensus       193 t~~f~--~~lG~G~fG~Vy~g~~~----------------~~g~~vAvK~l~~~~~~~~~~f~--------------~E~  240 (274)
                      .++|.  ++||+|+||.||+|.+.                ..+..||||++........++|.              .|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            44565  79999999999999752                23467999999765433334444              466


Q ss_pred             HHhcCCCCCCc-----cceeeEEEe--------CCeEEEEEeccCCC
Q 045713          241 VSMGALRHRNL-----VQLHGYCRR--------KQELLLVYNYMHNK  274 (274)
Q Consensus       241 ~~l~~l~H~Nl-----v~l~g~~~~--------~~~~~LV~Ey~~~G  274 (274)
                      .++.+++|.|+     ++++|+|..        .++.+||||||++|
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~g  270 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDA  270 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCC
Confidence            67777776654     778888864        35689999999986

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.82  E-value=2.7e-08  Score=84.03  Aligned_cols=77  Identities=34%  Similarity=0.561  Sum_probs=69.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|++|.||++....++..+++|++........+++.+|+..+.+++|+|++++.+.+...+..++++||++++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   82 (253)
T cd05122           6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGG   82 (253)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCC
Confidence            68999999999999998778999999997765556778999999999999999999999999999999999999854

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.82  E-value=1.4e-08  Score=91.16  Aligned_cols=79  Identities=25%  Similarity=0.480  Sum_probs=64.5

Q ss_pred             cCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------e
Q 045713          194 KGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------E  263 (274)
Q Consensus       194 ~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~  263 (274)
                      .+|.  +.||+|+||.||+|.....|..+|+|.+...  .......+.+|+.++.+++|+||+++.++|....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            3454  7899999999999998777899999998653  2233456889999999999999999999987542      4


Q ss_pred             EEEEEeccC
Q 045713          264 LLLVYNYMH  272 (274)
Q Consensus       264 ~~LV~Ey~~  272 (274)
                      .++|+||+.
T Consensus        95 ~~lv~e~~~  103 (342)
T cd07879          95 FYLVMPYMQ  103 (342)
T ss_pred             EEEEecccc
Confidence            699999985

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.82  E-value=1.5e-08  Score=90.25  Aligned_cols=76  Identities=21%  Similarity=0.330  Sum_probs=65.0

Q ss_pred             eeeec--cCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKG--GFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G--~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|  +||.||++.....|..||+|.+...  .....+.+.+|+.++..++|+||++++++|..++..++|+||+++|
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            45666  8999999998777999999998754  3334567889999999999999999999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.82  E-value=1e-08  Score=91.41  Aligned_cols=76  Identities=24%  Similarity=0.297  Sum_probs=64.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHh--------------HHHHHHHHHHhcCCCCCCccceeeEEEeCCe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW--------------MKEFVSEIVSMGALRHRNLVQLHGYCRRKQE  263 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~  263 (274)
                      +.||+|+||.||++.....+..||+|.+.......              ...+.+|+.++.+++|+||+++++++...+.
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   94 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF   94 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence            67999999999999988778999999986532111              1257899999999999999999999999999


Q ss_pred             EEEEEeccCC
Q 045713          264 LLLVYNYMHN  273 (274)
Q Consensus       264 ~~LV~Ey~~~  273 (274)
                      .++||||+++
T Consensus        95 ~~lv~e~~~~  104 (335)
T PTZ00024         95 INLVMDIMAS  104 (335)
T ss_pred             EEEEEecccc
Confidence            9999999864

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.82  E-value=1.4e-08  Score=93.01  Aligned_cols=70  Identities=16%  Similarity=0.171  Sum_probs=62.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|...      ...+.+|+.++.+++|+||+++++++......++|+|++.+
T Consensus        98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~~  167 (391)
T PHA03212         98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKT  167 (391)
T ss_pred             EEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCCC
Confidence            78999999999999998888999999753      23578899999999999999999999999999999998753

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.82  E-value=1.1e-08  Score=92.06  Aligned_cols=77  Identities=26%  Similarity=0.378  Sum_probs=64.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..+|+|.+...  .......+.+|+.++..++|+||+++++++...      ...++|||
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  102 (355)
T cd07874          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME  102 (355)
T ss_pred             EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhh
Confidence            7899999999999998777899999999754  334456788999999999999999999988643      34699999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |++++
T Consensus       103 ~~~~~  107 (355)
T cd07874         103 LMDAN  107 (355)
T ss_pred             hhccc
Confidence            99753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.82  E-value=1.4e-08  Score=95.76  Aligned_cols=77  Identities=23%  Similarity=0.324  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--------eEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--------ELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--------~~~LV  267 (274)
                      +.||+|+||.||++.....+..||||.+...  +......+.+|+..+..++|+|++++...+...+        .+++|
T Consensus        38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV  117 (496)
T PTZ00283         38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALV  117 (496)
T ss_pred             EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEE
Confidence            7999999999999998777899999999754  4455677899999999999999999887765432        36899


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      |||+++|
T Consensus       118 ~Ey~~~g  124 (496)
T PTZ00283        118 LDYANAG  124 (496)
T ss_pred             EeCCCCC
Confidence            9999886

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.82  E-value=1.5e-08  Score=86.44  Aligned_cols=76  Identities=32%  Similarity=0.531  Sum_probs=65.4

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.... +..+|+|.+.... ....+|.+|+.++.+++|+|++++++++......++++||+++|
T Consensus         9 ~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHG   84 (256)
T ss_pred             EeeecCcccceEEEEEEeC-CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence            3789999999999998754 6789999886542 22457899999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.82  E-value=1.3e-08  Score=90.82  Aligned_cols=75  Identities=25%  Similarity=0.310  Sum_probs=61.6

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC---CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL---RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ||+|+||.||++.....+..+|+|.+...   .......+..|..++.++   +|+||+++.+++...+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999999878899999999643   122334566677776654   699999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        81 g   81 (330)
T cd05586          81 G   81 (330)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.82  E-value=2.3e-08  Score=89.14  Aligned_cols=77  Identities=21%  Similarity=0.326  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccC----CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHD----SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++...   ..+..+|+|.+...    .....+.+..|+.++.++ +|+||+++.+++...+.+++|||
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (332)
T cd05614           6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILD   85 (332)
T ss_pred             EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEe
Confidence            78999999999998763   35789999998643    122345688899999999 58999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        86 ~~~~g   90 (332)
T cd05614          86 YVSGG   90 (332)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.81  E-value=1.8e-08  Score=87.42  Aligned_cols=76  Identities=30%  Similarity=0.534  Sum_probs=63.7

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+.    .||+|.++.. .....+++.+|+.++..++|+|+++++|+|.. ...++++||++
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~   91 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMP   91 (279)
T ss_pred             eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCC
Confidence            789999999999998755554    4899998754 44456789999999999999999999999975 45689999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        92 ~g   93 (279)
T cd05109          92 YG   93 (279)
T ss_pred             CC
Confidence            76

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.81  E-value=1.6e-08  Score=87.82  Aligned_cols=78  Identities=28%  Similarity=0.478  Sum_probs=63.7

Q ss_pred             cceeeeccCceEEEEEE----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVL----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~E  269 (274)
                      .+.||+|+||.||.+..    ...+..||+|.+... .......|.+|+.++.+++|+||+++.++|...  ..++++||
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (283)
T cd05080           9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIME   88 (283)
T ss_pred             ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEec
Confidence            37899999999987653    234678999999765 334567889999999999999999999998764  35799999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        89 ~~~~~   93 (283)
T cd05080          89 YVPLG   93 (283)
T ss_pred             CCCCC
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.81  E-value=6.4e-09  Score=90.24  Aligned_cols=76  Identities=29%  Similarity=0.484  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....|..+|+|.++...  ......+.+|+.++.+++|+|++++++++......++++||+++
T Consensus         6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (284)
T cd07839           6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ   83 (284)
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC
Confidence            68999999999999998888999999986532  22235678899999999999999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.81  E-value=1.4e-08  Score=88.56  Aligned_cols=76  Identities=30%  Similarity=0.437  Sum_probs=64.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCe-----EEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQE-----LLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~-----~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||+|.+....  ......+.+|+.++.+++ |+|++++++++...+.     .++|||
T Consensus         7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e   86 (295)
T cd07837           7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFE   86 (295)
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEee
Confidence            78999999999999998788999999986542  223457889999999995 6999999999987665     899999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+++
T Consensus        87 ~~~~   90 (295)
T cd07837          87 YLDS   90 (295)
T ss_pred             ccCc
Confidence            9975

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.81  E-value=1.7e-08  Score=89.09  Aligned_cols=74  Identities=23%  Similarity=0.413  Sum_probs=60.9

Q ss_pred             ceeeeccCceEEEEEEcC--CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST--SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      ..||+|+||.||++...+  .+..+|+|.+....  ....+.+|+.++.+++|+||+++.++|..  ....++|+||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            579999999999999753  35789999986542  23467889999999999999999999854  4568999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.81  E-value=7.2e-09  Score=90.53  Aligned_cols=75  Identities=32%  Similarity=0.519  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--HhHHHHHHHHHHhcCCCCCC-ccceeeEEEeCC------eEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--QWMKEFVSEIVSMGALRHRN-LVQLHGYCRRKQ------ELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~N-lv~l~g~~~~~~------~~~LV~  268 (274)
                      +.||+|.||.||+|.....|..||+|+++....  ..-..-++|+.++.+++|+| ||+|.+++...+      .++||+
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf   96 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF   96 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence            669999999999999988899999999976532  22345689999999999999 999999998877      789999


Q ss_pred             eccC
Q 045713          269 NYMH  272 (274)
Q Consensus       269 Ey~~  272 (274)
                      ||+.
T Consensus        97 e~~d  100 (323)
T KOG0594|consen   97 EFLD  100 (323)
T ss_pred             Eeec
Confidence            9985

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.81  E-value=1.5e-08  Score=89.15  Aligned_cols=76  Identities=33%  Similarity=0.618  Sum_probs=62.5

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....+.    .+|+|.+... ......++.+|+.++.+++|+||++++|+|... ..++++||++
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~   91 (303)
T cd05110          13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMP   91 (303)
T ss_pred             cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcC
Confidence            679999999999998755454    5799988755 334455799999999999999999999999754 4678999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        92 ~g   93 (303)
T cd05110          92 HG   93 (303)
T ss_pred             CC
Confidence            76

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.80  E-value=1.3e-08  Score=88.18  Aligned_cols=75  Identities=32%  Similarity=0.510  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|++|.||++....+|..+|+|++....  ......+.+|+.++.+++|+|++++.++|...+..+++|||++
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence            68999999999999988778999999987542  2334678899999999999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.80  E-value=1e-08  Score=88.48  Aligned_cols=77  Identities=22%  Similarity=0.312  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....++..+|+|.+...   .....+.+..|..++.+++ |+||+++++++...+..++||||+++
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (280)
T cd05581           7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPN   86 (280)
T ss_pred             eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCC
Confidence            7899999999999999878899999998653   2344567889999999998 99999999999999999999999976


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        87 ~   87 (280)
T cd05581          87 G   87 (280)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.80  E-value=1.3e-08  Score=88.98  Aligned_cols=76  Identities=24%  Similarity=0.400  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+++|.++...  ......+.+|+.++.+++|+|++++.+++...  ...+||+||+++
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~   90 (293)
T cd07843          11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH   90 (293)
T ss_pred             hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc
Confidence            68999999999999998778999999997542  22234678899999999999999999999877  789999999863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.80  E-value=2.2e-08  Score=87.05  Aligned_cols=76  Identities=34%  Similarity=0.575  Sum_probs=61.7

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+.    .+++|.+... ......++..|+..+.+++|+||++++|+|. ....++++||++
T Consensus        13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~   91 (279)
T cd05111          13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSP   91 (279)
T ss_pred             cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCC
Confidence            689999999999999865454    4788887644 2334567888999999999999999999985 456788999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        92 ~g   93 (279)
T cd05111          92 LG   93 (279)
T ss_pred             CC
Confidence            76

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.79  E-value=3.4e-08  Score=83.84  Aligned_cols=77  Identities=29%  Similarity=0.422  Sum_probs=68.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..+++|++...  .....+++.+|++++.+++|+|++++.+.+...+..++++||++++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~   84 (258)
T cd08215           6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGG   84 (258)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCC
Confidence            6899999999999999877899999999765  2355678999999999999999999999999899999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.79  E-value=3.4e-08  Score=87.14  Aligned_cols=76  Identities=30%  Similarity=0.447  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....+..+|+|.+...   .....+++.+|+.++.+++|+|++++.++|......++|+||+.+
T Consensus        21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   99 (308)
T cd06634          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG   99 (308)
T ss_pred             HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCC
Confidence            6799999999999998877889999998642   334456788999999999999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.79  E-value=1.8e-08  Score=87.72  Aligned_cols=75  Identities=25%  Similarity=0.336  Sum_probs=66.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....+..+|+|.+... .......+.+|+.++.++. |+||++++|++...+..++++||++
T Consensus        10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~   86 (288)
T cd06616          10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD   86 (288)
T ss_pred             HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence            6799999999999999888899999998754 2345668899999999996 9999999999998889999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.78  E-value=1.9e-08  Score=86.15  Aligned_cols=75  Identities=29%  Similarity=0.476  Sum_probs=62.8

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.... +..+|+|.+..... ..++|.+|+.++.+++|+|++++++++. .+..+++|||+++|
T Consensus        11 ~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~   85 (260)
T cd05070          11 IKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKG   85 (260)
T ss_pred             hheeccccCceEEEEEecC-CceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCC
Confidence            3789999999999998764 57799999875432 2457999999999999999999999885 55689999999865

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.78  E-value=1.6e-08  Score=90.61  Aligned_cols=77  Identities=26%  Similarity=0.441  Sum_probs=62.8

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeC-CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK-QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~-~~~~LV~E  269 (274)
                      +.||+|+||.||++...+     .+..||+|.++.. .....+.+..|+.++.++ +|+||++++++|... ..+++++|
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~e   92 (337)
T cd05054          13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE   92 (337)
T ss_pred             cccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEe
Confidence            789999999999997532     2468999998754 233456788999999999 899999999998754 56789999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        93 y~~~~   97 (337)
T cd05054          93 YCKFG   97 (337)
T ss_pred             cCCCC
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.78  E-value=2.6e-08  Score=87.82  Aligned_cols=76  Identities=33%  Similarity=0.486  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....|..||+|.++...  ......+.+|+.++.+++|+|++++.+++...  +..++|+||+.+
T Consensus        13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   92 (309)
T cd07845          13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ   92 (309)
T ss_pred             eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC
Confidence            78999999999999998788999999987542  22234567899999999999999999998754  568999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.78  E-value=2.5e-08  Score=89.11  Aligned_cols=76  Identities=24%  Similarity=0.459  Sum_probs=64.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-----eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-----ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-----~~~LV~Ey~  271 (274)
                      +.||+|+||.||++....+|..||+|.+... .......+..|+.++.+++|+||+++.+++....     ..++++||+
T Consensus        11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~   90 (336)
T cd07849          11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELM   90 (336)
T ss_pred             EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhc
Confidence            7899999999999998877899999998643 2334567889999999999999999999876543     479999998


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      ++
T Consensus        91 ~~   92 (336)
T cd07849          91 ET   92 (336)
T ss_pred             cc
Confidence            64

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.77  E-value=1.6e-08  Score=86.91  Aligned_cols=76  Identities=28%  Similarity=0.490  Sum_probs=62.8

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.+.||+|+||.||++...++ ..||+|.++... ...++|.+|+.++.+++|+|++++.+.+. .+..++||||+++|
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~   85 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKG   85 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCC
Confidence            347899999999999988654 579999997532 23457899999999999999999999874 45679999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.77  E-value=7.5e-09  Score=93.97  Aligned_cols=77  Identities=21%  Similarity=0.327  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe-EEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE-LLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~-~~LV~Ey~~~G  274 (274)
                      +++|+|+||.++....+.++..+++|.+.-.  +...++.-++|+.++++++|||||.....+...+. ++|||+|+++|
T Consensus        10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg   89 (426)
T KOG0589|consen   10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGG   89 (426)
T ss_pred             hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCC
Confidence            7899999999998877777789999999754  34456678999999999999999999999988888 89999999998

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.77  E-value=2.7e-08  Score=87.22  Aligned_cols=76  Identities=30%  Similarity=0.532  Sum_probs=63.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--------eEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--------ELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--------~~~LV  267 (274)
                      ..||+|+||.||++.....+..+|+|.+....  ......+.+|+.++.+++|+||++++++|...+        ..++|
T Consensus        18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv   97 (310)
T cd07865          18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLV   97 (310)
T ss_pred             EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEE
Confidence            78999999999999998788999999986542  222345678999999999999999999987654        35999


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      |||+.+
T Consensus        98 ~e~~~~  103 (310)
T cd07865          98 FEFCEH  103 (310)
T ss_pred             EcCCCc
Confidence            999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.77  E-value=3.7e-08  Score=83.99  Aligned_cols=78  Identities=23%  Similarity=0.307  Sum_probs=65.6

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEeccCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNYMHN  273 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey~~~  273 (274)
                      .+.||+|++|.||++....++..+|+|.+...  .....+.+.+|+.++.+++|+|++++.+.+.. ...++++|||+++
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~   84 (257)
T cd08223           5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEG   84 (257)
T ss_pred             EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCC
Confidence            37899999999999998877889999999654  33456678999999999999999999988764 4467999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        85 ~   85 (257)
T cd08223          85 G   85 (257)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.77  E-value=3e-08  Score=85.76  Aligned_cols=77  Identities=25%  Similarity=0.305  Sum_probs=63.8

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeC--CeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRK--QELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~--~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||++.....+..+|+|.++.. .........+|+.++.++. |+|++++.++|...  +.+++|+||++
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~   83 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD   83 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence            36799999999999998877899999998754 2222334568999999885 99999999999887  88999999996


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus        84 ~   84 (282)
T cd07831          84 M   84 (282)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.76  E-value=1.3e-08  Score=88.21  Aligned_cols=76  Identities=30%  Similarity=0.460  Sum_probs=64.4

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|.....+..+++|++.... ........+|+..+.+++ |+|++++.++|...+..++||||+.
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYME   81 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCC
Confidence            368999999999999998778899999986542 222334567999999999 9999999999999999999999983

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.76  E-value=3.5e-08  Score=85.05  Aligned_cols=77  Identities=30%  Similarity=0.498  Sum_probs=62.7

Q ss_pred             ceeeeccCceEEEEEEcC---CCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEE
Q 045713          198 ELIGKGGFGKVYKGVLST---SGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLL  266 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~---~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~L  266 (274)
                      ++||+|+||.||++....   .+..+|+|.+...  .....+++.+|+.++.+++|+|++++++++....      ..++
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   84 (273)
T cd05074           5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMV   84 (273)
T ss_pred             hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEE
Confidence            689999999999998643   3578999998764  3445677999999999999999999999886532      2478


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      ++||+++|
T Consensus        85 ~~~~~~~~   92 (273)
T cd05074          85 ILPFMKHG   92 (273)
T ss_pred             EEecCCCC
Confidence            88998765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.76  E-value=2.4e-08  Score=88.20  Aligned_cols=74  Identities=23%  Similarity=0.417  Sum_probs=60.5

Q ss_pred             ceeeeccCceEEEEEEcC--CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST--SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      ..||+|+||.||++...+  .+..+|+|.+....  ....+.+|+.++.+++|+||+++.+++..  ....++++||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            689999999999998653  45789999986542  23457889999999999999999998854  3567999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.75  E-value=3.7e-08  Score=86.26  Aligned_cols=77  Identities=21%  Similarity=0.327  Sum_probs=65.5

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      .+.||+|+||.||++.....+..+|||.++.. ......++..|+.++.++. |+||++++|+|......+++|||+++
T Consensus        20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   98 (296)
T cd06618          20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST   98 (296)
T ss_pred             eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc
Confidence            37899999999999999877899999999754 2334567788888777775 99999999999999999999999863

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.75  E-value=2.6e-08  Score=84.75  Aligned_cols=77  Identities=23%  Similarity=0.344  Sum_probs=67.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+++|.+...  ......++..|+.++.+++|+||+++.+++......++|+||++++
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd08530           6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG   84 (256)
T ss_pred             eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence            7899999999999988777899999998754  3344667889999999999999999999999899999999999764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.75  E-value=6e-09  Score=98.19  Aligned_cols=77  Identities=23%  Similarity=0.390  Sum_probs=70.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      -+||+|.+|.||.|........+|||.+.....+..+-...|+.+.++|+|+|||+.+|.|.+.+.+.|.||-+|+|
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG  657 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG  657 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence            48999999999999988777889999998776666777889999999999999999999999999999999999987

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.74  E-value=4.3e-08  Score=85.40  Aligned_cols=76  Identities=28%  Similarity=0.479  Sum_probs=57.6

Q ss_pred             ceeeeccCceEEEEEEc-CCCceEEEEEEccCC--HHhHHHHHHHHHHhcCC---CCCCccceeeEEEe-----CCeEEE
Q 045713          198 ELIGKGGFGKVYKGVLS-TSGLPIAVKKISHDS--EQWMKEFVSEIVSMGAL---RHRNLVQLHGYCRR-----KQELLL  266 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~~-----~~~~~L  266 (274)
                      +.||+|+||.||++... ..+..||+|.++...  ......+.+|+.++..+   +|+||++++++|..     ...+++
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~l   86 (290)
T cd07862           7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   86 (290)
T ss_pred             eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEE
Confidence            78999999999999874 346889999987542  22234566677666554   79999999999863     345899


Q ss_pred             EEeccCC
Q 045713          267 VYNYMHN  273 (274)
Q Consensus       267 V~Ey~~~  273 (274)
                      |+||+++
T Consensus        87 v~e~~~~   93 (290)
T cd07862          87 VFEHVDQ   93 (290)
T ss_pred             EEccCCC
Confidence            9999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.74  E-value=1e-08  Score=96.14  Aligned_cols=77  Identities=30%  Similarity=0.363  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||.|+-|.|-.|+....|+.+|||.+...   +........+|+.+|.-+.|||+++|+.++.+..++|||+||+++|
T Consensus        18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gG   97 (786)
T KOG0588|consen   18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGG   97 (786)
T ss_pred             ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCc
Confidence            6799999999999999989999999999766   2223456788999999999999999999999999999999999988

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.74  E-value=3.1e-08  Score=92.57  Aligned_cols=69  Identities=17%  Similarity=0.062  Sum_probs=61.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ..||+|+||.||++.....+..||||....      ..+.+|+.+|.+++|+|||+++++|...+..+||||++.
T Consensus       175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~  243 (461)
T PHA03211        175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR  243 (461)
T ss_pred             EEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence            689999999999999988889999996432      346789999999999999999999999999999999875

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.73  E-value=3.5e-08  Score=84.67  Aligned_cols=75  Identities=25%  Similarity=0.448  Sum_probs=62.3

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++.... +..+|+|.+.... ...+.|.+|+.++.+++|+|++++.+++. .+..+++|||+++|
T Consensus        11 ~~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~   85 (260)
T cd05069          11 DVKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKG   85 (260)
T ss_pred             eeeecCcCCCeEEEEEEcC-CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCC
Confidence            3789999999999998865 4579999886543 23467899999999999999999999875 55689999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.73  E-value=5.1e-08  Score=83.31  Aligned_cols=74  Identities=42%  Similarity=0.568  Sum_probs=62.7

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++...  |..+|+|.++...  ..+.|.+|+.++.+++|+|+++++|++.. .+..++++||+++|
T Consensus        11 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~   85 (256)
T cd05082          11 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   85 (256)
T ss_pred             eeeecccCCCeEEEEEEc--CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence            378999999999999876  6789999986543  24578999999999999999999998754 45689999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.73  E-value=5.3e-08  Score=83.35  Aligned_cols=77  Identities=23%  Similarity=0.288  Sum_probs=61.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHh-cCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSM-GALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l-~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+....   ......+..|..++ ...+|+|+++++++|...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            35899999999999988778999999986542   22234455665554 455899999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        82 ~   82 (260)
T cd05611          82 G   82 (260)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.72  E-value=5.8e-08  Score=87.22  Aligned_cols=87  Identities=24%  Similarity=0.413  Sum_probs=69.8

Q ss_pred             ChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          185 SYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       185 ~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      ...++...+.+|.  +.||+|+||.||++.....+..||+|++...  .....+.+.+|+.++.+++|+||+++.+++..
T Consensus         8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~   87 (345)
T cd07877           8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP   87 (345)
T ss_pred             HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence            3456666777776  7899999999999998777899999999754  23335678899999999999999999998864


Q ss_pred             C------CeEEEEEecc
Q 045713          261 K------QELLLVYNYM  271 (274)
Q Consensus       261 ~------~~~~LV~Ey~  271 (274)
                      .      ...++++|++
T Consensus        88 ~~~~~~~~~~~lv~~~~  104 (345)
T cd07877          88 ARSLEEFNDVYLVTHLM  104 (345)
T ss_pred             cccccccccEEEEehhc
Confidence            3      3367888876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.72  E-value=2.7e-08  Score=84.40  Aligned_cols=75  Identities=25%  Similarity=0.372  Sum_probs=65.5

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....+..+++|.+....   ......+..|+.++.+++|+|++++++.+...+..+++|||+++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            689999999999998778999999987542   234568899999999999999999999999999999999999754

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.72  E-value=6.2e-08  Score=86.96  Aligned_cols=75  Identities=24%  Similarity=0.438  Sum_probs=63.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||+|++...  .......+.+|+.+|.+++|+||+++.+++....      ..++|||
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  100 (343)
T cd07880          21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMP  100 (343)
T ss_pred             EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEe
Confidence            7899999999999998877899999998643  3334567889999999999999999999987543      4589999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      |+.
T Consensus       101 ~~~  103 (343)
T cd07880         101 FMG  103 (343)
T ss_pred             cCC
Confidence            984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.72  E-value=3.7e-08  Score=88.97  Aligned_cols=70  Identities=11%  Similarity=0.161  Sum_probs=61.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.....      ....|+.++.+++|+||++++++|...+..++|+||+.+
T Consensus        72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  141 (357)
T PHA03209         72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS  141 (357)
T ss_pred             EEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC
Confidence            7899999999999999877889999975432      235689999999999999999999999999999999853

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.71  E-value=4.6e-08  Score=83.53  Aligned_cols=73  Identities=37%  Similarity=0.584  Sum_probs=61.7

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++...  +..+|+|.++...  ....|.+|+.++.+++|+|++++.+++.. +..+++|||+++|
T Consensus        11 ~~~lg~g~~g~v~~~~~~--~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~   83 (254)
T cd05083          11 GEIIGEGEFGAVLQGEYT--GQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKG   83 (254)
T ss_pred             eeeeccCCCCceEecccC--CCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCCC
Confidence            378999999999999764  6789999986542  24578999999999999999999999865 4579999999865

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.71  E-value=6.1e-08  Score=87.25  Aligned_cols=76  Identities=28%  Similarity=0.400  Sum_probs=64.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..+|+|.+...  ......++.+|+.++.+++|+|++++++++...      ...++|+|
T Consensus        22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  101 (353)
T cd07850          22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVME  101 (353)
T ss_pred             EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEe
Confidence            7899999999999998878899999998643  334456788999999999999999999988643      24699999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+.+
T Consensus       102 ~~~~  105 (353)
T cd07850         102 LMDA  105 (353)
T ss_pred             ccCC
Confidence            9864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.70  E-value=8.8e-08  Score=79.57  Aligned_cols=78  Identities=32%  Similarity=0.512  Sum_probs=69.1

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHH-hHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|++|.||++...+.+..+++|.+...... ..+.+.+|+..+.+++|+|++++++++......++++||+++|
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~   82 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG   82 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence            36899999999999999877889999999865443 5778999999999999999999999999889999999999864

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.69  E-value=3.6e-08  Score=88.05  Aligned_cols=76  Identities=28%  Similarity=0.482  Sum_probs=63.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeC--CeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK--QELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~--~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|....++..+|+|++...  .......+.+|+.++.++ +|+||++++++|...  ...++|+||++
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~   92 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME   92 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc
Confidence            7899999999999998877899999998543  233455688899999999 999999999998654  36899999986


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus        93 ~   93 (337)
T cd07852          93 T   93 (337)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.69  E-value=1.4e-08  Score=93.09  Aligned_cols=79  Identities=23%  Similarity=0.357  Sum_probs=68.5

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEecc
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      |.+.||+|+|.+|++++....+.++|||++...   .....+-..+|-.+|.+| .||.|++|+--+.+...+|.|+||+
T Consensus        77 Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A  156 (604)
T KOG0592|consen   77 FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYA  156 (604)
T ss_pred             hhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEec
Confidence            448999999999999999888999999999654   222334467788889999 8999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      +||
T Consensus       157 ~nG  159 (604)
T KOG0592|consen  157 PNG  159 (604)
T ss_pred             CCC
Confidence            998

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.68  E-value=7.8e-08  Score=83.64  Aligned_cols=76  Identities=21%  Similarity=0.295  Sum_probs=59.2

Q ss_pred             eeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHH---HhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          199 LIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIV---SMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~---~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +||+|+||.||++.....+..+|+|.+....   ......+.+|..   ++...+|+|++.+.+++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999988778999999986541   122233444443   3344579999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        81 ~~   82 (279)
T cd05633          81 GG   82 (279)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.68  E-value=4.7e-08  Score=87.56  Aligned_cols=75  Identities=25%  Similarity=0.341  Sum_probs=62.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||.+...  .....+.+.+|+.++.+++|+||+++++++...      ...++++|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~  100 (343)
T cd07878          21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTN  100 (343)
T ss_pred             eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEee
Confidence            6899999999999998777899999999754  223456788999999999999999999987543      34689999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      ++.
T Consensus       101 ~~~  103 (343)
T cd07878         101 LMG  103 (343)
T ss_pred             cCC
Confidence            874

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.68  E-value=8.7e-08  Score=83.52  Aligned_cols=77  Identities=22%  Similarity=0.340  Sum_probs=64.5

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccCC----HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHDS----EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||.+...   ..|..+|+|.+....    ....+.+.+|+.++.++ +|+||+++.+++......++|+|
T Consensus         6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (290)
T cd05613           6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILD   85 (290)
T ss_pred             eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEe
Confidence            68999999999999863   357899999997542    12346788899999999 59999999999998889999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        86 ~~~~~   90 (290)
T cd05613          86 YINGG   90 (290)
T ss_pred             cCCCC
Confidence            99875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.67  E-value=7.8e-09  Score=87.45  Aligned_cols=86  Identities=26%  Similarity=0.333  Sum_probs=71.9

Q ss_pred             CccChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhc-CCCCCCccceeeEEE
Q 045713          182 QRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMG-ALRHRNLVQLHGYCR  259 (274)
Q Consensus       182 ~~~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~-~l~H~Nlv~l~g~~~  259 (274)
                      ..|+-++|+..     ..||.|.||.|+|-..+.+|..+|||+++.. .....++++.|.++.. .-+.+|||+++|.+.
T Consensus        59 ~~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F  133 (361)
T KOG1006|consen   59 HTFTSDNLQDL-----GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF  133 (361)
T ss_pred             cccccchHHHH-----HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh
Confidence            45666666543     5699999999999999999999999999876 4456778999997654 457899999999999


Q ss_pred             eCCeEEEEEeccC
Q 045713          260 RKQELLLVYNYMH  272 (274)
Q Consensus       260 ~~~~~~LV~Ey~~  272 (274)
                      ..+.+|+.||+|.
T Consensus       134 ~EGdcWiCMELMd  146 (361)
T KOG1006|consen  134 SEGDCWICMELMD  146 (361)
T ss_pred             cCCceeeeHHHHh
Confidence            9999999999985

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.67  E-value=7.4e-08  Score=83.72  Aligned_cols=76  Identities=28%  Similarity=0.457  Sum_probs=59.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCC---CCCCccceeeEEEe-----CCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGAL---RHRNLVQLHGYCRR-----KQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~~-----~~~~~LV  267 (274)
                      +.||+|+||.||++.....+..+|+|.++...  ......+.+|+.++.++   +|+||++++++|..     ....+++
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv   85 (288)
T cd07863           6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV   85 (288)
T ss_pred             eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence            68999999999999998888999999987531  12233456677666654   79999999998864     2357999


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      +||+++
T Consensus        86 ~e~~~~   91 (288)
T cd07863          86 FEHVDQ   91 (288)
T ss_pred             Eccccc
Confidence            999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.66  E-value=6.3e-08  Score=86.82  Aligned_cols=76  Identities=29%  Similarity=0.364  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--------------Ce
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--------------QE  263 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--------------~~  263 (274)
                      +.||+|+||.||+|.....+..||+|.+........+.+.+|+.++.+++|+||+++++++...              ..
T Consensus        11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (342)
T cd07854          11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS   90 (342)
T ss_pred             EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccce
Confidence            7899999999999999888899999999766555567889999999999999999999776543              35


Q ss_pred             EEEEEeccCC
Q 045713          264 LLLVYNYMHN  273 (274)
Q Consensus       264 ~~LV~Ey~~~  273 (274)
                      .++|+||+++
T Consensus        91 ~~lv~e~~~~  100 (342)
T cd07854          91 VYIVQEYMET  100 (342)
T ss_pred             EEEEeecccc
Confidence            7899999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.66  E-value=4.7e-08  Score=87.24  Aligned_cols=75  Identities=27%  Similarity=0.477  Sum_probs=63.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||+|++...  .....+.+.+|+.++.+++|+||+++.+++..    ...+++|+||+
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~   90 (334)
T cd07855          11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM   90 (334)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehh
Confidence            7899999999999998888999999998754  22345678889999999999999999998763    34689999998


Q ss_pred             C
Q 045713          272 H  272 (274)
Q Consensus       272 ~  272 (274)
                      .
T Consensus        91 ~   91 (334)
T cd07855          91 E   91 (334)
T ss_pred             h
Confidence            5

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.65  E-value=6e-08  Score=86.73  Aligned_cols=76  Identities=25%  Similarity=0.413  Sum_probs=63.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey  270 (274)
                      ..||+|+||.||++.....+..||+|.+...  .......+.+|+.++.+++|+||+++.+++...     ...+|++||
T Consensus        11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~   90 (337)
T cd07858          11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYEL   90 (337)
T ss_pred             EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeC
Confidence            6899999999999998878899999998753  233455778899999999999999999988654     347999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      +..
T Consensus        91 ~~~   93 (337)
T cd07858          91 MDT   93 (337)
T ss_pred             CCC
Confidence            863

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.64  E-value=3.9e-08  Score=84.19  Aligned_cols=78  Identities=18%  Similarity=0.274  Sum_probs=62.7

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC-----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .+.||+|+||.||++.....+..+++|.++..     ......++..|+.++.+++|+|++++.+++......++||||+
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (260)
T cd08222           5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYC   84 (260)
T ss_pred             eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeC
Confidence            37899999999999988655555666665432     2233456778999999999999999999999888999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        85 ~~~   87 (260)
T cd08222          85 EGR   87 (260)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.64  E-value=3.5e-08  Score=86.51  Aligned_cols=75  Identities=29%  Similarity=0.466  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEcc--CCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-----CCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISH--DSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-----KQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~--~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-----~~~~~LV~Ey  270 (274)
                      +.||+|++|.|..+....+|..||||.+..  ......+.-.+|+.+|..++|+||+.+......     -..+|+|+|+
T Consensus        28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el  107 (359)
T KOG0660|consen   28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL  107 (359)
T ss_pred             ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence            679999999999999998899999999973  345556778999999999999999999998865     3568999999


Q ss_pred             cC
Q 045713          271 MH  272 (274)
Q Consensus       271 ~~  272 (274)
                      |+
T Consensus       108 Me  109 (359)
T KOG0660|consen  108 ME  109 (359)
T ss_pred             Hh
Confidence            85

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.63  E-value=1.2e-07  Score=82.51  Aligned_cols=77  Identities=23%  Similarity=0.346  Sum_probs=64.2

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccCC----HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHDS----EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++...   ..+..+|||.+....    ....+.+.+|+.++.++ +|+|++++.+++......++|||
T Consensus         6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e   85 (288)
T cd05583           6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILD   85 (288)
T ss_pred             EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEe
Confidence            78999999999998753   346789999986431    22345788999999999 59999999999988899999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        86 ~~~~~   90 (288)
T cd05583          86 YVNGG   90 (288)
T ss_pred             cCCCC
Confidence            99875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.62  E-value=1.3e-07  Score=91.24  Aligned_cols=90  Identities=26%  Similarity=0.405  Sum_probs=70.1

Q ss_pred             cChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEe
Q 045713          184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRR  260 (274)
Q Consensus       184 ~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~  260 (274)
                      ..++.+...+..|.  +++|.|.+|.||++.....++.+|+|++...... ..+...|..++... .|||++.++|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            34444555555554  8999999999999998888999999998765322 34556677777766 69999999999865


Q ss_pred             -----CCeEEEEEeccCCC
Q 045713          261 -----KQELLLVYNYMHNK  274 (274)
Q Consensus       261 -----~~~~~LV~Ey~~~G  274 (274)
                           ++++|||||||.+|
T Consensus        88 ~~~~~~DqLWLVMEfC~gG  106 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGG  106 (953)
T ss_pred             ecCCCCCeEEEEeeccCCc
Confidence                 46899999999887

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.61  E-value=1.8e-07  Score=81.33  Aligned_cols=76  Identities=21%  Similarity=0.275  Sum_probs=59.1

Q ss_pred             eeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHH---HHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          199 LIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEI---VSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~---~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +||+|+||.||++.....+..||+|.+....   ......+..|.   ..+....|+|++++.+++...+..++|+||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999987778999999986542   12222344443   34455689999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        81 g~   82 (278)
T cd05606          81 GG   82 (278)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.60  E-value=7e-08  Score=85.76  Aligned_cols=76  Identities=30%  Similarity=0.413  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-----eEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-----ELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-----~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..+|+|.+....  ....+.+.+|+.++..++|+||+++.+++...+     .++++|||
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~   85 (330)
T cd07834           6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTEL   85 (330)
T ss_pred             eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecc
Confidence            78999999999999988778999999987642  344578999999999999999999999998765     78999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      +++
T Consensus        86 ~~~   88 (330)
T cd07834          86 MET   88 (330)
T ss_pred             hhh
Confidence            874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.60  E-value=1.5e-09  Score=90.70  Aligned_cols=77  Identities=30%  Similarity=0.414  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|.|..||++.....|+..|+|.++..  +..+.++..+|+.+...|+|||||+|.....+....+||+|+|.+|
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~   95 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG   95 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccch
Confidence            7899999999999998888999999988644  3345678889999999999999999999998889999999999876

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.60  E-value=9.5e-08  Score=82.59  Aligned_cols=76  Identities=34%  Similarity=0.501  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|++|.||++....++..+++|.+....  ......+.+|+.++.+++|+|++++.+.+...+..++++||+++
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (283)
T cd05118           5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT   82 (283)
T ss_pred             eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence            67999999999999988778999999987542  23456788999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.60  E-value=9.2e-08  Score=83.90  Aligned_cols=76  Identities=29%  Similarity=0.464  Sum_probs=62.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--------eEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--------ELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--------~~~LV  267 (274)
                      +.||+|+||.||++.....+..+|+|.+....  ......+.+|+.++.+++|+||+++++++....        .+++|
T Consensus        14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv   93 (311)
T cd07866          14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMV   93 (311)
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEE
Confidence            78999999999999988778999999986542  222346788999999999999999999875433        46999


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      +||+..
T Consensus        94 ~~~~~~   99 (311)
T cd07866          94 TPYMDH   99 (311)
T ss_pred             EecCCc
Confidence            999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.58  E-value=7.2e-08  Score=83.29  Aligned_cols=76  Identities=33%  Similarity=0.503  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|.||.||+|.....+..+|+|.+....  ....+.+..|+.++.+++|+|++++.+++...+..++|+||+++
T Consensus         5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM   82 (282)
T ss_pred             hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc
Confidence            67999999999999998778999999997652  33356788999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.58  E-value=2e-07  Score=80.67  Aligned_cols=76  Identities=30%  Similarity=0.461  Sum_probs=61.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC---CCCCccceeeEEEeCCe-----EEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL---RHRNLVQLHGYCRRKQE-----LLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~~~~~-----~~LV  267 (274)
                      +.||+|+||.||++.....+..+|+|.+...  .......+.+|+.++.++   +|+|++++.++|...+.     .+++
T Consensus         5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~   84 (287)
T cd07838           5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV   84 (287)
T ss_pred             EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence            6899999999999999877899999999743  222244566787766554   69999999999988776     8999


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      |||+++
T Consensus        85 ~e~~~~   90 (287)
T cd07838          85 FEHVDQ   90 (287)
T ss_pred             ehhccc
Confidence            999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.56  E-value=2.4e-07  Score=81.63  Aligned_cols=73  Identities=25%  Similarity=0.200  Sum_probs=58.9

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +|.|+++.||++..  .+..+|+|+++..  .....+.+.+|+.++.+++|+||+++++++...+..+++|||+++|
T Consensus        10 ~~~~~~v~~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216          10 FEDLMIVHLAKHKP--TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hcCCceEEEEEecC--CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            34444545555544  5899999999754  3455678999999999999999999999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.52  E-value=2.7e-07  Score=84.45  Aligned_cols=71  Identities=20%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             ceeeeccCceEEEEEEcC--CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST--SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ..||+|+||.||++...+  .+..||+|.+...     +.+.+|+.++.+++|+||+++++++...+..+++||++.+
T Consensus        98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  170 (392)
T PHA03207         98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC  170 (392)
T ss_pred             EeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCC
Confidence            789999999999997643  3478999988643     2356799999999999999999999999999999999764

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.52  E-value=1.8e-07  Score=87.63  Aligned_cols=74  Identities=28%  Similarity=0.517  Sum_probs=63.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-C-----CCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-H-----RNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|.||+|-|+.....++.||||+++... .-..+-+.|+.+|..|+ |     -|+|+++.++..++.+|||+|.+
T Consensus       192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL  270 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL  270 (586)
T ss_pred             EEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence            79999999999999998889999999997753 33455677999998886 4     38999999999999999999986


Q ss_pred             C
Q 045713          272 H  272 (274)
Q Consensus       272 ~  272 (274)
                      .
T Consensus       271 ~  271 (586)
T KOG0667|consen  271 S  271 (586)
T ss_pred             h
Confidence            4

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.51  E-value=1.5e-07  Score=84.51  Aligned_cols=75  Identities=24%  Similarity=0.373  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe------EEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE------LLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~------~~LV~E  269 (274)
                      ..||+|+||.||++....++..+|+|.+...  .....+.+.+|+.++.+++|+|++++.+++...+.      .++|+|
T Consensus        21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  100 (343)
T cd07851          21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTH  100 (343)
T ss_pred             EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEe
Confidence            7899999999999999877899999998653  23345678899999999999999999998766554      899999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      |+.
T Consensus       101 ~~~  103 (343)
T cd07851         101 LMG  103 (343)
T ss_pred             cCC
Confidence            984

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.51  E-value=6.1e-07  Score=72.95  Aligned_cols=74  Identities=32%  Similarity=0.586  Sum_probs=65.4

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCCHH-hHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ||+|.+|.||++.....+..+++|.+...... ..+.+.+|+..+.+++|++++++++++......++++||+++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCC
Confidence            68999999999999877899999999766332 456799999999999999999999999998999999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.49  E-value=3.9e-07  Score=76.17  Aligned_cols=71  Identities=28%  Similarity=0.431  Sum_probs=62.8

Q ss_pred             cCceEEEEEEcCCCceEEEEEEccCCHHh-HHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          204 GFGKVYKGVLSTSGLPIAVKKISHDSEQW-MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       204 ~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +||.||++...+++..+++|.+....... .+.+.+|+..+.+++|+|++++.++|......++++||+++|
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   72 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGG   72 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCC
Confidence            58999999998778999999997664333 678999999999999999999999999999999999998864

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PTZ00284 protein kinase; Provisional

Probab=98.47  E-value=4.8e-07  Score=84.75  Aligned_cols=83  Identities=24%  Similarity=0.336  Sum_probs=60.0

Q ss_pred             HHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC------CCCccceeeEEEe
Q 045713          189 LYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR------HRNLVQLHGYCRR  260 (274)
Q Consensus       189 l~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~------H~Nlv~l~g~~~~  260 (274)
                      +...+.+|.  +.||+|+||.||++.....+..||||+++... ...+++..|+.++.+++      |.+++++..++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            333445555  78999999999999988778999999996532 22334555666665554      4568899998875


Q ss_pred             C-CeEEEEEeccC
Q 045713          261 K-QELLLVYNYMH  272 (274)
Q Consensus       261 ~-~~~~LV~Ey~~  272 (274)
                      . +..+||||++.
T Consensus       203 ~~~~~~iv~~~~g  215 (467)
T PTZ00284        203 ETGHMCIVMPKYG  215 (467)
T ss_pred             CCceEEEEEeccC
Confidence            4 46899999874

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.45  E-value=9.5e-07  Score=76.29  Aligned_cols=70  Identities=17%  Similarity=0.187  Sum_probs=54.3

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||+|+||.||++.....+..+|+|.+......   +.  |+.....+ +|+|++++++++...+..++||||+++|
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~   94 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDG   94 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCC
Confidence            69999999999998877899999998653211   11  22222112 6999999999999999999999999875

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.44  E-value=8e-08  Score=95.40  Aligned_cols=70  Identities=31%  Similarity=0.457  Sum_probs=57.4

Q ss_pred             hhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC
Q 045713          192 ATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK  261 (274)
Q Consensus       192 at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~  261 (274)
                      --.+|.  .+||+||||.||+.+-+-+|+.+|||+|... +........+|+.++++|+|||+|+.+..+.+.
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVES  549 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence            334565  6899999999999998888999999999765 334456678999999999999999988755443

>PRK10345 hypothetical protein; Provisional

Probab=98.44  E-value=6.6e-07  Score=74.89  Aligned_cols=70  Identities=16%  Similarity=0.210  Sum_probs=55.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-----CCCCccceeeEEEeCC---e-EEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-----RHRNLVQLHGYCRRKQ---E-LLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-----~H~Nlv~l~g~~~~~~---~-~~LV~  268 (274)
                      ..||+|+||.||.  .+..+.. +||.+........+++.+|+.++.++     .|+||++++|++....   . +.+|+
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             ceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            6899999999996  5444444 69988765444567899999999999     5799999999998763   3 34789


Q ss_pred             ec
Q 045713          269 NY  270 (274)
Q Consensus       269 Ey  270 (274)
                      ||
T Consensus        85 e~   86 (210)
T PRK10345         85 DF   86 (210)
T ss_pred             cC
Confidence            99

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.43  E-value=1e-07  Score=88.92  Aligned_cols=79  Identities=20%  Similarity=0.426  Sum_probs=65.9

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccC----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe--EEEEEe
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE--LLLVYN  269 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~--~~LV~E  269 (274)
                      |.++||+|+|-+||||.....|.+||.-.++..    +....+.|..|+.+|+.|+|+|||+++.++.....  +-+|.|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            457999999999999999888999987655432    44556889999999999999999999998776544  778999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      +|..|
T Consensus       124 L~TSG  128 (632)
T KOG0584|consen  124 LFTSG  128 (632)
T ss_pred             cccCC
Confidence            99876

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.41  E-value=1e-06  Score=78.62  Aligned_cols=76  Identities=22%  Similarity=0.288  Sum_probs=61.1

Q ss_pred             ceeeeccCceEEEEEEcCC--CceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeC----CeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTS--GLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK----QELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~--g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~----~~~~LV~  268 (274)
                      +.||+|+||.||++.....  +..+|+|.+...  .....+.+.+|+.++.++ .|+||+++++.+...    ...++++
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~   85 (332)
T cd07857           6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYE   85 (332)
T ss_pred             EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEE
Confidence            6899999999999998766  789999998753  223356788999999999 599999999986543    3468888


Q ss_pred             eccCC
Q 045713          269 NYMHN  273 (274)
Q Consensus       269 Ey~~~  273 (274)
                      ||+.+
T Consensus        86 e~~~~   90 (332)
T cd07857          86 ELMEA   90 (332)
T ss_pred             ecccC
Confidence            88753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.41  E-value=5.2e-08  Score=84.22  Aligned_cols=76  Identities=26%  Similarity=0.454  Sum_probs=61.7

Q ss_pred             ceeeeccCceEEEEEEcCCC----ceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g----~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey  270 (274)
                      ..||+|.+|.||++.-.+..    ..+|+|.++...  ..-...-++|+.++.+++|+|++.|.-++.+ ...++|++||
T Consensus        30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdY  109 (438)
T KOG0666|consen   30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDY  109 (438)
T ss_pred             ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehh
Confidence            56999999999999654322    378999997652  2234567899999999999999999999877 6788999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      .++
T Consensus       110 AEh  112 (438)
T KOG0666|consen  110 AEH  112 (438)
T ss_pred             hhh
Confidence            874

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.41  E-value=5.3e-08  Score=96.05  Aligned_cols=89  Identities=26%  Similarity=0.258  Sum_probs=74.9

Q ss_pred             hhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          186 YKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       186 ~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      ..++.-...+|.  .+||+|+||.|.....+..+..+|.|+++.+   .+....-|..|-.+|.--+.+.||+|.-.+.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            445555555666  7899999999999999888999999999875   23344567788889988889999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      ...+|+|||||++|
T Consensus       147 ~~~LYlVMdY~pGG  160 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGG  160 (1317)
T ss_pred             ccceEEEEecccCc
Confidence            99999999999998

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=1.9e-07  Score=81.29  Aligned_cols=77  Identities=23%  Similarity=0.333  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+||+|.||+|..+.-+..+..+|+|+++.+   .+.....-+.|-.+|...+||.|..|.-.+...+.+|.||||+.+|
T Consensus       174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGG  253 (516)
T KOG0690|consen  174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGG  253 (516)
T ss_pred             HHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCc
Confidence            7999999999999998888999999999876   3444555678999999999999999998889999999999999876

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=2.5e-07  Score=84.80  Aligned_cols=77  Identities=22%  Similarity=0.297  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|.|..|-.+..--.|..||||.+...  +.-.....++|+..|.-++|||||+|+-+...+..+|||+|+-.+|
T Consensus        24 kTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G  102 (864)
T KOG4717|consen   24 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG  102 (864)
T ss_pred             hhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence            6799999999998887777999999999766  3344567889999999999999999999999999999999986654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.36  E-value=5.9e-08  Score=91.12  Aligned_cols=77  Identities=27%  Similarity=0.397  Sum_probs=69.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..+|+|.+|.|||++....+...|+|.++-.........+.|+-++...+|+|||.++|-+...+.+++.||||.+|
T Consensus        21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycggg   97 (829)
T KOG0576|consen   21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGG   97 (829)
T ss_pred             eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCC
Confidence            67999999999999988888999999998775555667788999999999999999999999999999999999876

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.34  E-value=7.2e-07  Score=84.35  Aligned_cols=74  Identities=19%  Similarity=0.373  Sum_probs=55.2

Q ss_pred             ceeeeccCceEEEEEEcCCC-ceEEEE------------------EEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSG-LPIAVK------------------KISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC  258 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g-~~vAvK------------------~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~  258 (274)
                      +.||+|+||.||++..+... ...+.|                  .+.. .......+.+|+.+|.+++|+||+++++++
T Consensus       154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~  232 (501)
T PHA03210        154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENILKIEEIL  232 (501)
T ss_pred             eEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence            78999999999998764321 112222                  1111 122345688999999999999999999999


Q ss_pred             EeCCeEEEEEeccC
Q 045713          259 RRKQELLLVYNYMH  272 (274)
Q Consensus       259 ~~~~~~~LV~Ey~~  272 (274)
                      ...+..++++|++.
T Consensus       233 ~~~~~~~lv~e~~~  246 (501)
T PHA03210        233 RSEANTYMITQKYD  246 (501)
T ss_pred             EECCeeEEEEeccc
Confidence            99999999998764

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.34  E-value=6.3e-07  Score=73.89  Aligned_cols=74  Identities=15%  Similarity=0.114  Sum_probs=51.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--Hh-------HHH-----------------HHHHHHHhcCCCCCCc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--QW-------MKE-----------------FVSEIVSMGALRHRNL  251 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--~~-------~~~-----------------f~~E~~~l~~l~H~Nl  251 (274)
                      ..||+|+||.||+|... +|..||||.++....  ..       ...                 ...|+..|.++.|+++
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            57999999999999987 689999999975421  11       111                 2348899999988776


Q ss_pred             cceeeEEEeCCeEEEEEeccCCC
Q 045713          252 VQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       252 v~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .......  ....+|||||++++
T Consensus        82 ~~p~~~~--~~~~~iVmE~i~g~  102 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFIGDD  102 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEeCCC
Confidence            4433221  22338999999763

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.29  E-value=3.2e-06  Score=69.54  Aligned_cols=74  Identities=16%  Similarity=0.155  Sum_probs=54.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHH--------------------------hHHHHHHHHHHhcCCCCCCc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ--------------------------WMKEFVSEIVSMGALRHRNL  251 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~--------------------------~~~~f~~E~~~l~~l~H~Nl  251 (274)
                      ..||+|+||+||+|... +|..||||.++.....                          ....+..|...+.+++|+++
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           3 GCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             ceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            57999999999999987 6899999998754210                          01123578899999999987


Q ss_pred             cceeeEEEeCCeEEEEEeccCCC
Q 045713          252 VQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       252 v~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .....+...  ..+|||||++++
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~  102 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDD  102 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCC
Confidence            554444332  248999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.27  E-value=8.3e-08  Score=95.89  Aligned_cols=77  Identities=30%  Similarity=0.478  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||.|.||+||.+.-.+.|...|+|.+.-.  .....+....|+.++..|+|||+|+.+|.-..++..+|.||||++|
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence            5899999999999999888999999998754  2333456788999999999999999999999999999999999987

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.25  E-value=9.1e-07  Score=78.77  Aligned_cols=86  Identities=19%  Similarity=0.335  Sum_probs=64.9

Q ss_pred             hhHHHhhcCcc--ceeeeccCceEEEEEEcCC-----CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEE
Q 045713          187 KDLYKATKGFK--ELIGKGGFGKVYKGVLSTS-----GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYC  258 (274)
Q Consensus       187 ~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~-----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~  258 (274)
                      +||.....+|.  .++-+|.||+||+|.+++.     .+.|-||.++.. +.-....|+.|...+..+.|+||.+..|.|
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            34444444444  6889999999999977532     256778887665 444567899999999999999999999999


Q ss_pred             EeCC-eEEEEEeccC
Q 045713          259 RRKQ-ELLLVYNYMH  272 (274)
Q Consensus       259 ~~~~-~~~LV~Ey~~  272 (274)
                      .+.. ..+++|.++.
T Consensus       357 ie~~~~P~V~y~~~~  371 (563)
T KOG1024|consen  357 IEDYATPFVLYPATG  371 (563)
T ss_pred             eeccCcceEEEeccC
Confidence            8765 4577777764

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.25  E-value=2e-06  Score=71.50  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=60.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|++|.||+|...  |..+++|.......        .....+.+|+.++..++|+|+.....++...+..+|+||
T Consensus         2 ~~l~~G~~~~vy~~~~~--~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL--GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEeeC--CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            46899999999999874  67899998654311        123468899999999999999888888877888899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |++++
T Consensus        80 ~~~G~   84 (211)
T PRK14879         80 YIEGE   84 (211)
T ss_pred             EeCCc
Confidence            99864

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.25  E-value=6.2e-07  Score=83.21  Aligned_cols=73  Identities=21%  Similarity=0.359  Sum_probs=61.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--------HhHHHHHHHHHHhcCCC---CCCccceeeEEEeCCeEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--------QWMKEFVSEIVSMGALR---HRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~---H~Nlv~l~g~~~~~~~~~L  266 (274)
                      ..||+|+||+|+.+.++....+|.||.+....-        ......-.|+.+|..++   |+||++++.++++.+..+|
T Consensus       567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl  646 (772)
T KOG1152|consen  567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL  646 (772)
T ss_pred             eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence            689999999999999987788999999975421        11123457999999997   9999999999999999999


Q ss_pred             EEec
Q 045713          267 VYNY  270 (274)
Q Consensus       267 V~Ey  270 (274)
                      ++|=
T Consensus       647 ~te~  650 (772)
T KOG1152|consen  647 ETEV  650 (772)
T ss_pred             EecC
Confidence            9984

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.22  E-value=3.1e-06  Score=71.73  Aligned_cols=67  Identities=21%  Similarity=0.244  Sum_probs=55.9

Q ss_pred             ccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          203 GGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       203 G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      |.||.||++....++..+|+|.+...+     .+.+|...+....|+|++++.+++...+..++++||+++|
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            789999999998889999999997543     2334555555667999999999999999999999999876

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.22  E-value=2e-06  Score=70.90  Aligned_cols=74  Identities=22%  Similarity=0.239  Sum_probs=57.6

Q ss_pred             eeeeccCceEEEEEEcCCCceEEEEEEccCC--------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          199 LIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      .||+|+||.||+|.+.  +..+++|......        ......+.+|+.++..++|+++.....++...+..+|+|||
T Consensus         1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            4899999999999964  6789999865321        11235678999999999998877666667677778999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      ++++
T Consensus        79 ~~g~   82 (199)
T TIGR03724        79 IEGK   82 (199)
T ss_pred             ECCc
Confidence            9864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.21  E-value=6.4e-07  Score=80.87  Aligned_cols=76  Identities=29%  Similarity=0.414  Sum_probs=62.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---C----HHhHHHHHHHHHHhcCCCCCCccceeeEEE-eCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---S----EQWMKEFVSEIVSMGALRHRNLVQLHGYCR-RKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~-~~~~~~LV~E  269 (274)
                      ++||+|+|..||++..-...+.||||+-...   .    ....+..++|-.+...|.|+.||+++.++. +.+.+|-|+|
T Consensus       469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE  548 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE  548 (775)
T ss_pred             HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence            5899999999999987656789999986432   1    122456789999999999999999999985 4567899999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      ||++
T Consensus       549 YceG  552 (775)
T KOG1151|consen  549 YCEG  552 (775)
T ss_pred             ecCC
Confidence            9986

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.17  E-value=7.9e-07  Score=74.72  Aligned_cols=77  Identities=27%  Similarity=0.316  Sum_probs=67.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey~~  272 (274)
                      +.||+|||..||.++--..+..+|+|++...+.++.+..++|++..++++|+|+++++.++..+     .+.||++.|..
T Consensus        27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~  106 (302)
T KOG2345|consen   27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYK  106 (302)
T ss_pred             eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhc
Confidence            7899999999999986566789999999887777788999999999999999999999988543     35899999876


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      .|
T Consensus       107 ~G  108 (302)
T KOG2345|consen  107 RG  108 (302)
T ss_pred             cc
Confidence            65

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.07  E-value=1.1e-05  Score=76.89  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=57.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEE-ccC-C------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI-SHD-S------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l-~~~-~------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||+|.+..  ..+++|.. ... .      ....+.+.+|+.++.+++|+|++....++......+||||
T Consensus       339 ~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E  416 (535)
T PRK09605        339 HLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME  416 (535)
T ss_pred             ceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence            789999999999998864  33444432 111 1      1223568899999999999999998888888778899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus       417 ~~~g~  421 (535)
T PRK09605        417 YIGGK  421 (535)
T ss_pred             ecCCC
Confidence            99875

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.07  E-value=1.9e-06  Score=78.03  Aligned_cols=79  Identities=25%  Similarity=0.354  Sum_probs=69.1

Q ss_pred             cc--ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          196 FK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       196 f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      |.  ++||+|+||.||-++.+..|.-+|.|.+...   .+++..--++|-.++.+++.+.||.|--.++.++.+|||+..
T Consensus       187 F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtl  266 (591)
T KOG0986|consen  187 FRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTL  266 (591)
T ss_pred             eeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEe
Confidence            55  7999999999999999999999999988654   234455678899999999999999999889999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |.+|
T Consensus       267 MNGG  270 (591)
T KOG0986|consen  267 MNGG  270 (591)
T ss_pred             ecCC
Confidence            9887

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.00  E-value=6.3e-06  Score=77.56  Aligned_cols=93  Identities=19%  Similarity=0.223  Sum_probs=76.7

Q ss_pred             CccChhhHHHhhcCcc-----ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccc
Q 045713          182 QRFSYKDLYKATKGFK-----ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQ  253 (274)
Q Consensus       182 ~~~~~~el~~at~~f~-----~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~  253 (274)
                      +...|-.|.+|..+-+     ..||-|+||.|..+.-.+....+|.|.|+..+   +.......+|-.+|.+...+.+|+
T Consensus       614 KESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVr  693 (1034)
T KOG0608|consen  614 KESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVR  693 (1034)
T ss_pred             hhhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEE
Confidence            3456777888776533     67999999999998877777788999997652   333456778999999999999999


Q ss_pred             eeeEEEeCCeEEEEEeccCCC
Q 045713          254 LHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       254 l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      |+-.+.+++.+|.||||.++|
T Consensus       694 LyySFQDkdnLYFVMdYIPGG  714 (1034)
T KOG0608|consen  694 LYYSFQDKDNLYFVMDYIPGG  714 (1034)
T ss_pred             EEEEeccCCceEEEEeccCCc
Confidence            999999999999999999998

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.00  E-value=9.3e-07  Score=79.21  Aligned_cols=84  Identities=24%  Similarity=0.314  Sum_probs=65.9

Q ss_pred             HhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEE
Q 045713          191 KATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       191 ~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~L  266 (274)
                      .+.-+|..+||+|+||+|..+.-+.....+|||+++.+   ...+.+--+.|-.+|.-. +-|-|++|..++..-+.++.
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            33345668999999999999998877788999999876   122233345566666655 57899999999999999999


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      ||||+.+|
T Consensus       428 VMEyvnGG  435 (683)
T KOG0696|consen  428 VMEYVNGG  435 (683)
T ss_pred             EEEEecCc
Confidence            99999887

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.98  E-value=1.8e-05  Score=67.07  Aligned_cols=74  Identities=15%  Similarity=0.184  Sum_probs=57.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHH------HHHHHHHhcCCCCCCccceeeEEEeC-------
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKE------FVSEIVSMGALRHRNLVQLHGYCRRK-------  261 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~------f~~E~~~l~~l~H~Nlv~l~g~~~~~-------  261 (274)
                      +++|+|+||.||....  .+..+|+|.+....   ......      |.+|+..+.+++|++|..+..+....       
T Consensus        37 ~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~  114 (232)
T PRK10359         37 KVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY  114 (232)
T ss_pred             EEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence            7999999999998655  35689999997542   111122      67999999999999999998875532       


Q ss_pred             -CeEEEEEeccCC
Q 045713          262 -QELLLVYNYMHN  273 (274)
Q Consensus       262 -~~~~LV~Ey~~~  273 (274)
                       +..+|+|||+++
T Consensus       115 ~~~~~lvmEyi~G  127 (232)
T PRK10359        115 AHTYIMLIEYIEG  127 (232)
T ss_pred             cCCeEEEEEEECC
Confidence             357999999986

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.94  E-value=9.8e-08  Score=80.37  Aligned_cols=76  Identities=32%  Similarity=0.574  Sum_probs=61.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--------CeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--------QELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--------~~~~LV  267 (274)
                      .++|+|.||.||++...+.|..||+|++--+  ...--..-++|+.+|..|+|+|++.|+-.|...        ..++||
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV  102 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV  102 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence            5799999999999999888888998875322  222234568999999999999999999999652        348999


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      ++||++
T Consensus       103 f~~ceh  108 (376)
T KOG0669|consen  103 FDFCEH  108 (376)
T ss_pred             HHHhhh
Confidence            999874

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.91  E-value=5.7e-06  Score=74.07  Aligned_cols=74  Identities=26%  Similarity=0.432  Sum_probs=64.2

Q ss_pred             ceeeeccCceEEEEEEcC---CCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST---SGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|.|+.||++.+..   ....||+|.+...+.  .....+|+++|.++ .|.|++++.++....+..++|+||+++
T Consensus        42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H  119 (418)
T KOG1167|consen   42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEH  119 (418)
T ss_pred             ccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCc
Confidence            789999999999998865   568999999976532  23578999999998 589999999999999999999999875

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.90  E-value=8.6e-06  Score=69.60  Aligned_cols=83  Identities=22%  Similarity=0.322  Sum_probs=68.3

Q ss_pred             cChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeC
Q 045713          184 FSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRK  261 (274)
Q Consensus       184 ~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~  261 (274)
                      ....||+..     ..||+|..|.|++...+..|..+|||.+... ..+..+..+..+.++...+ .|.||+.+||+...
T Consensus        89 ~dindl~~l-----~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n  163 (391)
T KOG0983|consen   89 ADINDLENL-----GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN  163 (391)
T ss_pred             cChHHhhhH-----HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC
Confidence            344555432     5699999999999999988999999999876 4556777888888877664 89999999999999


Q ss_pred             CeEEEEEecc
Q 045713          262 QELLLVYNYM  271 (274)
Q Consensus       262 ~~~~LV~Ey~  271 (274)
                      ...++.||.|
T Consensus       164 ~dV~IcMelM  173 (391)
T KOG0983|consen  164 TDVFICMELM  173 (391)
T ss_pred             chHHHHHHHH
Confidence            8888888876

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=97.86  E-value=5.8e-06  Score=70.59  Aligned_cols=77  Identities=21%  Similarity=0.307  Sum_probs=65.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--------HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--------EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.||.|....|-++..+..|.+.|+|++....        ..-.++-.+|+.+|.++ .||+|++|...+.....+++|+
T Consensus        23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVF  102 (411)
T KOG0599|consen   23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVF  102 (411)
T ss_pred             HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhh
Confidence            68999999999999998889999999986431        12244567899999987 7999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      |.|+.|
T Consensus       103 dl~prG  108 (411)
T KOG0599|consen  103 DLMPRG  108 (411)
T ss_pred             hhcccc
Confidence            999987

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.86  E-value=3e-05  Score=59.88  Aligned_cols=73  Identities=11%  Similarity=0.061  Sum_probs=60.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCC--CCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRH--RNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|.++.||++...  +..+++|.......  ...+.+|+..+..++|  .++.++++++...+..++++||++++
T Consensus         4 ~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           4 KLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             eecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            56899999999999986  36899999865432  4678899999999976  48899998888778899999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.83  E-value=1.4e-05  Score=74.04  Aligned_cols=73  Identities=29%  Similarity=0.350  Sum_probs=62.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ..||+||..+||+....+ ...+|+|++...  +.+....|.+|+..|.+| .|.+|++|+.|-...+.+|+||||=
T Consensus       367 k~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G  442 (677)
T KOG0596|consen  367 KQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG  442 (677)
T ss_pred             HhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc
Confidence            579999999999998765 466777776533  567788999999999999 5999999999999999999999984

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.82  E-value=4.6e-05  Score=62.92  Aligned_cols=72  Identities=19%  Similarity=0.225  Sum_probs=52.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH----------------------HhHHHHHHHHHHhcCCCCCC--ccc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE----------------------QWMKEFVSEIVSMGALRHRN--LVQ  253 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~----------------------~~~~~f~~E~~~l~~l~H~N--lv~  253 (274)
                      +.||+|+||.||++... +|..||||++.....                      .....+..|...+.++.|.+  +.+
T Consensus        21 ~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~   99 (198)
T cd05144          21 NQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK   99 (198)
T ss_pred             CccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence            78999999999999886 589999998764310                      01123677888888887774  444


Q ss_pred             eeeEEEeCCeEEEEEeccCCC
Q 045713          254 LHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       254 l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .++.    ...++||||++++
T Consensus       100 ~~~~----~~~~lv~e~~~g~  116 (198)
T cd05144         100 PIDW----NRHAVVMEYIDGV  116 (198)
T ss_pred             eeec----CCceEEEEEeCCc
Confidence            4442    3458999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.77  E-value=5.7e-05  Score=72.52  Aligned_cols=78  Identities=21%  Similarity=0.326  Sum_probs=48.7

Q ss_pred             hcCcc--ceeeeccCceEEEEEEcCC----CceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeE------EEe
Q 045713          193 TKGFK--ELIGKGGFGKVYKGVLSTS----GLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY------CRR  260 (274)
Q Consensus       193 t~~f~--~~lG~G~fG~Vy~g~~~~~----g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~------~~~  260 (274)
                      .++|.  +.||+|+||.||+|.+...    +..||+|++.....  .+.+..|.  +.+..+.++..++..      +..
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~~  206 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRRACPNSCADFVYGFLEPVSSKK  206 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHhhchhhHHHHHHhhhccccccc
Confidence            34455  7999999999999999877    78999999865322  11122221  112222222222111      345


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      ..+.+|||||+++|
T Consensus       207 ~~~~~LV~ey~~~g  220 (566)
T PLN03225        207 EDEYWLVWRYEGES  220 (566)
T ss_pred             CCceEEEEEecCCC
Confidence            67889999999875

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.76  E-value=1.7e-05  Score=76.51  Aligned_cols=70  Identities=24%  Similarity=0.406  Sum_probs=57.0

Q ss_pred             ceeeeccCce-EEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGK-VYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~-Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +++|.|.-|. ||+|.+.  |+.||||++-.+   ...-..+|+..++.- .|+|||+.+|.-..++.+||..|.|.
T Consensus       515 eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             HHcccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            6889998886 8999997  789999998543   223446899998887 69999998877777788999999874

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.75  E-value=0.00016  Score=63.23  Aligned_cols=74  Identities=19%  Similarity=0.260  Sum_probs=49.4

Q ss_pred             ceeeeccCceEEEEEEcCC---CceEEEEEEccCCHHh-----------HHHHHHHHHHhcCCCCCCccceeeEEEeCC-
Q 045713          198 ELIGKGGFGKVYKGVLSTS---GLPIAVKKISHDSEQW-----------MKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-  262 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-  262 (274)
                      ++||+|+||.||+|...+.   +..+++|.........           ......+...+..+.|+|++++++++.... 
T Consensus        18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~   97 (294)
T PHA02882         18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRC   97 (294)
T ss_pred             eEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecC
Confidence            7899999999999998765   4567777543221110           112334445567789999999999876543 


Q ss_pred             ---eEEEEEecc
Q 045713          263 ---ELLLVYNYM  271 (274)
Q Consensus       263 ---~~~LV~Ey~  271 (274)
                         ..++++|++
T Consensus        98 ~~~~~~~~~~~~  109 (294)
T PHA02882         98 RMYYRFILLEKL  109 (294)
T ss_pred             CceEEEEEEehh
Confidence               236666654

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.68  E-value=4.3e-05  Score=62.93  Aligned_cols=75  Identities=24%  Similarity=0.297  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcC-CCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ..||+|++|.|-+-.+..+|...|+|++... ..+..+..+.|+.+..+ ...|.+|.++|.....+..++.||.|.
T Consensus        52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~  128 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD  128 (282)
T ss_pred             hhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh
Confidence            5699999999988888778999999999866 45667788999987655 479999999999888999999999884

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.64  E-value=0.00011  Score=59.69  Aligned_cols=30  Identities=33%  Similarity=0.432  Sum_probs=26.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD  228 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~  228 (274)
                      +.||+|+||.||++... ++..||||.+...
T Consensus         3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~   32 (187)
T cd05119           3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTG   32 (187)
T ss_pred             cccccccceeEEEEECC-CCCEEEEEEEecC
Confidence            57999999999999887 5889999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>smart00090 RIO RIO-like kinase

Probab=97.64  E-value=0.00015  Score=61.87  Aligned_cols=72  Identities=18%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             ceeeeccCceEEEEE-EcCCCceEEEEEEccCCHH------------------------hHHHHHHHHHHhcCCCCCC--
Q 045713          198 ELIGKGGFGKVYKGV-LSTSGLPIAVKKISHDSEQ------------------------WMKEFVSEIVSMGALRHRN--  250 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~-~~~~g~~vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~l~H~N--  250 (274)
                      +.||+|+||.||+|. ....|..||+|.++.....                        ....+..|...+.++.|..  
T Consensus        34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~  113 (237)
T smart00090       34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVP  113 (237)
T ss_pred             CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            789999999999998 4446899999998743110                        1123568999999887533  


Q ss_pred             ccceeeEEEeCCeEEEEEeccCC
Q 045713          251 LVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       251 lv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.+.+++    ...+|||||+++
T Consensus       114 ~p~~~~~----~~~~lV~E~~~g  132 (237)
T smart00090      114 VPKPIAW----RRNVLVMEFIGG  132 (237)
T ss_pred             CCeeeEe----cCceEEEEEecC
Confidence            3333433    234899999876

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.59  E-value=2.8e-05  Score=68.19  Aligned_cols=77  Identities=21%  Similarity=0.323  Sum_probs=65.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      .+||+|++.+|....+....+.+|+|.++..   ..++....+.|-.+.... +||.||.|..++.....++.|.||+++
T Consensus       256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~g  335 (593)
T KOG0695|consen  256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNG  335 (593)
T ss_pred             eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecC
Confidence            7999999999999999888899999998764   334455667777766654 799999999999999999999999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       336 g  336 (593)
T KOG0695|consen  336 G  336 (593)
T ss_pred             c
Confidence            7

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.58  E-value=2.2e-05  Score=65.62  Aligned_cols=73  Identities=22%  Similarity=0.418  Sum_probs=60.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCC--eEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQ--ELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~--~~~LV~Ey~~~  273 (274)
                      +.+|+|.+..|+.|..-.+...+.||.++.   ...+...+|+.+|..|+ |+||++|+....++.  ...|++||+.|
T Consensus        44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n  119 (338)
T KOG0668|consen   44 RKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNN  119 (338)
T ss_pred             HHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcc
Confidence            579999999999998655578899999965   33567889999999997 999999999887654  35899999876

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=97.57  E-value=0.00032  Score=59.03  Aligned_cols=65  Identities=28%  Similarity=0.251  Sum_probs=48.2

Q ss_pred             CCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEeccccc
Q 045713           23 GNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFS   93 (274)
Q Consensus        23 g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~   93 (274)
                      +.+++++|+|+  .+.|.|.+....   +.....-..++. ..+++..|+||||+||...+.|.|++|.+.
T Consensus       152 ~~~~~~~I~y~--~~~l~v~i~~~~---~~~~~~c~~~~~-~~l~~~~y~G~sA~tg~~~d~~dIls~~~~  216 (218)
T cd07308         152 NAPTTLRISYL--NNTLKVDITYSE---GNNWKECFTVED-VILPSQGYFGFSAQTGDLSDNHDILSVHTY  216 (218)
T ss_pred             CCCeEEEEEEE--CCEEEEEEeCCC---CCCccEEEEcCC-cccCCCCEEEEEeccCCCcCcEEEEEEEee
Confidence            57999999999  679999987432   112222222322 146789999999999999999999999764

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.47  E-value=2.4e-05  Score=67.63  Aligned_cols=72  Identities=21%  Similarity=0.246  Sum_probs=58.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEe----CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRR----KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~----~~~~~LV~Ey~~  272 (274)
                      ++||-|--|+|..+..+..+...|+|.|... .    .-.+|+++.-.. .|+|||+++.++.+    ..-+++|||+|+
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me  142 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-P----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME  142 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcC-H----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence            7899999999999999888999999998543 2    234577654443 69999999998865    345789999999


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       143 GG  144 (400)
T KOG0604|consen  143 GG  144 (400)
T ss_pred             ch
Confidence            87

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.41  E-value=0.00027  Score=65.74  Aligned_cols=30  Identities=20%  Similarity=0.303  Sum_probs=26.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD  228 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~  228 (274)
                      +.||+|++|+||+|++.+ |..||||..+..
T Consensus       123 ~plasaSigQVh~A~l~~-G~~VaVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVD-GKEVAVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEecC-CCEEEEEeeCCC
Confidence            579999999999999974 899999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.39  E-value=2e-05  Score=67.36  Aligned_cols=76  Identities=18%  Similarity=0.396  Sum_probs=63.3

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..+|.+...|..|+|.+.  |..+.+|++...  +....++|..|...+.-+.||||+.++|.|.....+.++..|||.|
T Consensus       195 ~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g  272 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG  272 (448)
T ss_pred             hhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence            356888889999999997  556677777543  4445678999999888889999999999999999999999999975

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.32  E-value=0.00015  Score=68.73  Aligned_cols=33  Identities=21%  Similarity=0.338  Sum_probs=28.8

Q ss_pred             cc-ceeeeccCceEEEEEEcCCCceEEEEEEccC
Q 045713          196 FK-ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD  228 (274)
Q Consensus       196 f~-~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~  228 (274)
                      |. +.||+|++|+||++.+.++|+.||||.++..
T Consensus       122 fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        122 FDIKPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             cChhhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            44 5799999999999999877899999999754

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.28  E-value=0.00011  Score=65.39  Aligned_cols=74  Identities=20%  Similarity=0.372  Sum_probs=61.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCC--C----CccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRH--R----NLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~----Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .++|+|.||+|-++.....+..||+|+++.- ...++.-+-|+.++.++.+  |    -+|++..|+.-.+..|||+|.|
T Consensus        95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell  173 (415)
T KOG0671|consen   95 DLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL  173 (415)
T ss_pred             hhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc
Confidence            7899999999999998877899999999653 2335567789999999832  2    3788889999999999999987


Q ss_pred             C
Q 045713          272 H  272 (274)
Q Consensus       272 ~  272 (274)
                      .
T Consensus       174 G  174 (415)
T KOG0671|consen  174 G  174 (415)
T ss_pred             C
Confidence            4

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.24  E-value=0.0011  Score=55.36  Aligned_cols=70  Identities=13%  Similarity=0.052  Sum_probs=52.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH---H-hHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---Q-WMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---~-~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ..|++|+||+||...-  .+..++.+.+.....   . ..+-|.+|+.+|.+|. |+++.+++++    +..+++|||++
T Consensus         8 ~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          8 EPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             eeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            6899999999995544  367788777765422   1 1235889999999995 5789999887    44699999987


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus        82 G   82 (218)
T PRK12274         82 G   82 (218)
T ss_pred             C
Confidence            5

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.21  E-value=2.4e-05  Score=66.84  Aligned_cols=74  Identities=30%  Similarity=0.408  Sum_probs=59.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey  270 (274)
                      +-||-|+||.||..+.+.+|+.||.|++..-  +-...+.+.+|+.+++-++|.|++.++..-...     +++|++.|+
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            6799999999999999888999999998643  334467899999999999999999988765443     245666665


Q ss_pred             c
Q 045713          271 M  271 (274)
Q Consensus       271 ~  271 (274)
                      |
T Consensus       139 m  139 (449)
T KOG0664|consen  139 M  139 (449)
T ss_pred             H
Confidence            5

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=97.19  E-value=0.0017  Score=54.96  Aligned_cols=68  Identities=22%  Similarity=0.250  Sum_probs=47.8

Q ss_pred             CCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCccc-ccccceeEeEEeeecCcccceeEecccccc
Q 045713           23 GNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQ-ILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        23 g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~-~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      ..+.++.|.|+.  +.|.|.+....  .+.......-+++.. .||+..|+||||+||...+.|.|++|.+.+
T Consensus       155 ~~p~~~rI~Y~~--~~l~V~~d~~~--~~~~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~~~s  223 (225)
T cd06902         155 PYPVRAKITYYQ--NVLTVSINNGF--TPNKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFLTFS  223 (225)
T ss_pred             CCCeEEEEEEEC--CeEEEEEeCCc--CCCCCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEEEec
Confidence            468999999998  46888885321  222221222223333 467789999999999999999999998864

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.07  E-value=0.0026  Score=54.52  Aligned_cols=74  Identities=28%  Similarity=0.508  Sum_probs=62.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH---HhHHHHHHHHHHhcCCCCC-CccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---QWMKEFVSEIVSMGALRHR-NLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~-Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ..||.|+||.||++...   ..+++|.+.....   .....|.+|+.++..+.|+ |++++...+......++++||+.+
T Consensus         6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   82 (384)
T COG0515           6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDG   82 (384)
T ss_pred             EeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCC
Confidence            67899999999999986   6789999876522   2477899999999999988 799999999777778999999886


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      +
T Consensus        83 ~   83 (384)
T COG0515          83 G   83 (384)
T ss_pred             C
Confidence            4

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.04  E-value=0.00066  Score=58.24  Aligned_cols=76  Identities=18%  Similarity=0.287  Sum_probs=61.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceee-EEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHG-YCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g-~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|.||.+..+..+.+.+.+++|.+... ....++|.+|..---.| .|.||+.-+. .+...+....++||+|.|
T Consensus        30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~g  107 (378)
T KOG1345|consen   30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRG  107 (378)
T ss_pred             HHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccc
Confidence            6899999999999999988899999998764 23367899998654455 5899998664 456667778999999976

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.04  E-value=0.00029  Score=66.40  Aligned_cols=73  Identities=27%  Similarity=0.297  Sum_probs=61.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..+|.|+|+.|-++.....+...+||++...    ..+-.+|+.++... +|+|++++.+.|....+.++|||++.+|
T Consensus       328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~  401 (612)
T KOG0603|consen  328 EELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGG  401 (612)
T ss_pred             cccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhcccc
Confidence            5699999999999999888899999999765    12334567665555 7999999999999999999999999875

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.95  E-value=0.00039  Score=64.42  Aligned_cols=98  Identities=21%  Similarity=0.340  Sum_probs=71.5

Q ss_pred             hccccccCCCccChhhHHHhhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-----
Q 045713          173 EDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-----  247 (274)
Q Consensus       173 ~~~~~~~~~~~~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----  247 (274)
                      +.|....|--++.+.|+...........|+|-|+.|.+|.....|..||||+|..+. .-.+.=+.|+++|.+|.     
T Consensus       413 DNWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~E  491 (752)
T KOG0670|consen  413 DNWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPE  491 (752)
T ss_pred             cCcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCch
Confidence            345444444445555665544433356899999999999988778999999997653 22345578999999884     


Q ss_pred             -CCCccceeeEEEeCCeEEEEEecc
Q 045713          248 -HRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       248 -H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                       --+.++|+-.|...+.+|||+|-+
T Consensus       492 dk~Hclrl~r~F~hknHLClVFE~L  516 (752)
T KOG0670|consen  492 DKFHCLRLFRHFKHKNHLCLVFEPL  516 (752)
T ss_pred             hhhHHHHHHHHhhhcceeEEEehhh
Confidence             236889998888999999999954

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.89  E-value=0.0021  Score=59.17  Aligned_cols=88  Identities=17%  Similarity=0.306  Sum_probs=65.6

Q ss_pred             ccChhhHHH-hhcCccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-----C---CCccc
Q 045713          183 RFSYKDLYK-ATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-----H---RNLVQ  253 (274)
Q Consensus       183 ~~~~~el~~-at~~f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~Nlv~  253 (274)
                      .....|... +.....++||=|.|.+||.+......+.||+|+.+.. .+..+.-+.|+.+|++++     |   ..+|+
T Consensus        68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            334444443 2222237899999999999998777799999998654 455667789999998773     3   36999


Q ss_pred             eeeEEEeC----CeEEEEEecc
Q 045713          254 LHGYCRRK----QELLLVYNYM  271 (274)
Q Consensus       254 l~g~~~~~----~~~~LV~Ey~  271 (274)
                      |+..|...    ..+|+|+|++
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvL  168 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVL  168 (590)
T ss_pred             eeccceecCCCCcEEEEEehhh
Confidence            99998654    4689999986

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.66  E-value=0.0059  Score=52.11  Aligned_cols=74  Identities=9%  Similarity=0.089  Sum_probs=55.1

Q ss_pred             ceee-eccCceEEEEEEcCCCceEEEEEEccCC-------------HHhHHHHHHHHHHhcCCCCCCc--cceeeEEEeC
Q 045713          198 ELIG-KGGFGKVYKGVLSTSGLPIAVKKISHDS-------------EQWMKEFVSEIVSMGALRHRNL--VQLHGYCRRK  261 (274)
Q Consensus       198 ~~lG-~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-------------~~~~~~f~~E~~~l~~l~H~Nl--v~l~g~~~~~  261 (274)
                      ..|| .|+.|.||.....  +..+++|++....             ......+.+|+.++.+|+|+++  .+.++++...
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            5788 8999999999886  6789999885321             1223567889999999998875  6777776543


Q ss_pred             Ce----EEEEEeccCC
Q 045713          262 QE----LLLVYNYMHN  273 (274)
Q Consensus       262 ~~----~~LV~Ey~~~  273 (274)
                      ..    .+||+||+++
T Consensus       115 ~~~~~~~~lV~e~l~G  130 (239)
T PRK01723        115 HGLFYRADILIERIEG  130 (239)
T ss_pred             cCcceeeeEEEEecCC
Confidence            22    2599999986

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.58  E-value=0.0022  Score=54.26  Aligned_cols=72  Identities=26%  Similarity=0.389  Sum_probs=54.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCC-CCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRH-RNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ..||+|+||.+|.|..-.+|.+||||.=+...  ...+..-|..+..-|+| ..|..+.-+..++..-.||||+.
T Consensus        21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL   93 (341)
T KOG1163|consen   21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL   93 (341)
T ss_pred             EeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence            78999999999999987789999999754432  22356677777777765 45666666666777778999875

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.31  E-value=0.0063  Score=50.41  Aligned_cols=75  Identities=11%  Similarity=0.142  Sum_probs=56.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCC--CccceeeEEEeCC---eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-QWMKEFVSEIVSMGALRHR--NLVQLHGYCRRKQ---ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~--Nlv~l~g~~~~~~---~~~LV~Ey~  271 (274)
                      +.|+.|..+.+|+....+ |..+++|....... .....+.+|..++..+++.  ++.++++++....   ..++||||+
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            458899999999998864 57899998754321 1345788899999988753  4577888876542   568999999


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      ++
T Consensus        83 ~G   84 (223)
T cd05154          83 DG   84 (223)
T ss_pred             CC
Confidence            75

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.09  E-value=0.0093  Score=53.13  Aligned_cols=74  Identities=20%  Similarity=0.203  Sum_probs=51.9

Q ss_pred             ceeeeccCceEEEEEEcCCC-ceEEEEEEccCCHHhHHHHHHHHHHhcCCCC----CCccceeeEE-EeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSG-LPIAVKKISHDSEQWMKEFVSEIVSMGALRH----RNLVQLHGYC-RRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H----~Nlv~l~g~~-~~~~~~~LV~Ey~  271 (274)
                      ..||+|+||.||.+.....+ ..+|+|.-..........+..|+.++..+.+    +++.+++... ......++||+.+
T Consensus        24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~  103 (322)
T KOG1164|consen   24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL  103 (322)
T ss_pred             eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc
Confidence            78999999999999976543 5788887765422222256677777777752    4666777666 3556679999865

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=96.07  E-value=0.00056  Score=63.26  Aligned_cols=77  Identities=19%  Similarity=0.228  Sum_probs=63.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||-|+||+|=...........|+|+++..   .....+...+|-.+|.+.+.+.||+|+--+.+...+|++||-|-+|
T Consensus       426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG  505 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG  505 (732)
T ss_pred             hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence            4799999999988888754455889988754   3344566788999999999999999999999999999999987665

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.89  E-value=0.013  Score=46.41  Aligned_cols=72  Identities=11%  Similarity=0.092  Sum_probs=50.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccc-eeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQ-LHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~-l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.++.|.++.||+....  +..+++|....... ....+..|...+..+.+.++++ ++++.  ...-++||||++++
T Consensus         4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~   76 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGS   76 (170)
T ss_pred             eecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCC
Confidence            45788999999999875  67899998755421 1234677888888876656553 44433  33357999999863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.56  E-value=0.064  Score=47.09  Aligned_cols=68  Identities=24%  Similarity=0.284  Sum_probs=45.1

Q ss_pred             eecCCC-cEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccc-cccceeEeEEeeecCcccceeEeccccc
Q 045713           19 DLQSGN-PMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQI-LLDTMHVGFSASTGILTSNQYILGWSFS   93 (274)
Q Consensus        19 ~l~~g~-~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~-l~~~~~vGfsastg~~~~~~~i~~WsF~   93 (274)
                      ++.+.. .-..-|.|+.  ++|++.....+   |.  ...--.++..+ ||.--|.|+||+||...+.|.+.+--+-
T Consensus       204 ~~rn~~~dt~~~iry~~--~~l~~~~dl~~---~~--~~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~kl~  273 (351)
T KOG3839|consen  204 NFRNLPHDTLVVIRYEK--KTLSISIDLEG---PN--EWIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSLKLF  273 (351)
T ss_pred             eeccCCCcceeEEEecC--CceEEEEecCC---Cc--eeeeeeeecceecccceEEeeeeccCccchhhHHHHhhhh
Confidence            344443 2456788887  66666664432   22  23444555554 6778999999999999999998776544

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=94.89  E-value=0.016  Score=58.39  Aligned_cols=73  Identities=23%  Similarity=0.299  Sum_probs=51.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC---CCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR---HRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..+|+|+||+||+|...+ |..||+|.-+...   ..+|.--.+++.||+   -+-++.+..+..-.+..+||.||.+.|
T Consensus       704 ~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~G  779 (974)
T KOG1166|consen  704 KEIGEGSYGSVYVATHSN-GKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYG  779 (974)
T ss_pred             eeeccccceEEEEeecCC-CcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccc
Confidence            689999999999999876 8999999875543   234554555666666   123344444444567778999998876

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=94.58  E-value=0.054  Score=42.32  Aligned_cols=9  Identities=22%  Similarity=0.224  Sum_probs=3.8

Q ss_pred             EEEehhhhh
Q 045713          139 IIIVFPIVA  147 (274)
Q Consensus       139 ~~i~~~~~~  147 (274)
                      ++|++++++
T Consensus        50 IVIGvVVGV   58 (154)
T PF04478_consen   50 IVIGVVVGV   58 (154)
T ss_pred             EEEEEEecc
Confidence            444444443

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=94.50  E-value=0.16  Score=42.60  Aligned_cols=60  Identities=23%  Similarity=0.313  Sum_probs=40.8

Q ss_pred             CCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeee-ecCcccccc-cceeEeEEeeecCcccceeEecccc
Q 045713           22 SGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLST-PLDLSQILL-DTMHVGFSASTGILTSNQYILGWSF   92 (274)
Q Consensus        22 ~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~-~~dl~~~l~-~~~~vGfsastg~~~~~~~i~~WsF   92 (274)
                      ++.+.++.|.|+...+.|.|.+..       +-.+.. .+.    || .-.|+||||+||...+.|.|++..+
T Consensus       150 ~~~p~~iri~Y~~~~~~l~v~vd~-------~~Cf~~~~v~----lP~~~y~fGiSAaTg~~~d~hdIl~~~~  211 (215)
T cd06903         150 SGVPSTIRLSYDALNSLFKVQVDN-------RLCFQTDKVQ----LPQGGYRFGITAANADNPESFEILKLKV  211 (215)
T ss_pred             CCCCEEEEEEEECCCCEEEEEECC-------CEEEecCCee----cCCCCCEEEEEEcCCCCCCcEEEEEEEE
Confidence            344788888888766778877631       112221 133    35 4567999999999999999987554

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.31  E-value=0.029  Score=33.48  Aligned_cols=16  Identities=19%  Similarity=0.281  Sum_probs=6.7

Q ss_pred             CcEEEehhhhhhhHHH
Q 045713          137 GPIIIVFPIVAVFAVA  152 (274)
Q Consensus       137 ~~~~i~~~~~~~~~~~  152 (274)
                      ....|+++++..++++
T Consensus         9 ~~vaIa~~VvVPV~vI   24 (40)
T PF08693_consen    9 NTVAIAVGVVVPVGVI   24 (40)
T ss_pred             ceEEEEEEEEechHHH
Confidence            3444444444433333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=94.14  E-value=0.22  Score=42.70  Aligned_cols=66  Identities=20%  Similarity=0.147  Sum_probs=43.6

Q ss_pred             CCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           23 GNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        23 g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      +.+.+++|.|...  .|.|.+...+... -..++...   .-.||...|+||||+||...+.|.|++-.+..
T Consensus       157 ~~~t~~rI~Y~~~--~l~v~vd~~~~~~-w~~Cf~~~---~v~LP~~~yfGiSA~Tg~~sd~hdIlsv~~~~  222 (248)
T cd06901         157 DHDTFVAIRYSKG--RLTVMTDIDGKNE-WKECFDVT---GVRLPTGYYFGASAATGDLSDNHDIISMKLYE  222 (248)
T ss_pred             CCCeEEEEEEECC--eEEEEEecCCCCc-eeeeEEeC---CeecCCCCEEEEEecCCCCCCcEEEEEEEEec
Confidence            3457899999964  5777765432111 01122211   12357779999999999999999998877765

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=93.95  E-value=0.067  Score=50.20  Aligned_cols=68  Identities=24%  Similarity=0.320  Sum_probs=50.3

Q ss_pred             ceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEeccCC
Q 045713          206 GKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYNYMHN  273 (274)
Q Consensus       206 G~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey~~~  273 (274)
                      -+-||+...-+|..+..|+++.+..+.......-++.+.++.|.|+|+|..++..    ...++|||+|.|+
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~  361 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS  361 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence            3579999887899999999954322222223345677889999999999988763    3468999999875

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=93.94  E-value=0.077  Score=51.02  Aligned_cols=62  Identities=18%  Similarity=0.241  Sum_probs=49.4

Q ss_pred             EEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          210 KGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       210 ~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .|..+..+..|.|...+...........+.+..|..+|||||++++......+.+|||.|-+
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV   91 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV   91 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc
Confidence            46666678899999887665433344566778899999999999999999999999999854

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=93.49  E-value=0.18  Score=42.69  Aligned_cols=68  Identities=26%  Similarity=0.324  Sum_probs=42.1

Q ss_pred             eeecC-CCcEEEEEEeeCCCcEEEEEEEeC--CCCCCCCCeeee-ecCcccccccceeEeEEeeecCcccceeEeccc
Q 045713           18 LDLQS-GNPMQIWIDYNGEEKLLNVTLAPI--RVSKPNRPLLST-PLDLSQILLDTMHVGFSASTGILTSNQYILGWS   91 (274)
Q Consensus        18 ~~l~~-g~~~~awi~y~~~~~~l~v~~~~~--~~~~~~~~~ls~-~~dl~~~l~~~~~vGfsastg~~~~~~~i~~Ws   91 (274)
                      +++++ +.+.++.|.|...  .|.|.+...  .....-...+.. .+    .||+.-|+||||+||...+.|.|++-.
T Consensus       153 ~~~rn~~~p~~~ri~Y~~~--~l~v~id~~~~~~~~~~~~Cf~~~~v----~LP~~~yfGvSA~Tg~~~d~hdi~s~~  224 (229)
T PF03388_consen  153 ADYRNSDVPTRIRISYSKN--TLTVSIDSNYLKNQDDWELCFTTDGV----DLPEGYYFGVSAATGELSDNHDILSVK  224 (229)
T ss_dssp             ---BTESSEEEEEEEEETT--EEEEEEETSCCSECCTTEEEEEESTE----EGGSSBEEEEEEEESSSGGEEEEEEEE
T ss_pred             eccCcCCCCEEEEEEEECC--eEEEEEecccccCCcCCcEEEEcCCe----ecCCCCEEEEEecCCCCCCcEEEEEEE
Confidence            34443 4567899999875  566666421  111112223332 23    357788999999999999999997643

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=93.36  E-value=0.018  Score=50.65  Aligned_cols=72  Identities=28%  Similarity=0.420  Sum_probs=50.6

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEecc
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYNYM  271 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~Ey~  271 (274)
                      +|.|.- .|--+...-.++.||+|.+...  .....+.-.+|..+|..+.|+|+++++.++....      +.++|||||
T Consensus        25 ~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m  103 (369)
T KOG0665|consen   25 IGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELM  103 (369)
T ss_pred             cCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhh
Confidence            444433 3443433334688999987643  2233456788999999999999999999886543      569999998


Q ss_pred             C
Q 045713          272 H  272 (274)
Q Consensus       272 ~  272 (274)
                      .
T Consensus       104 ~  104 (369)
T KOG0665|consen  104 D  104 (369)
T ss_pred             h
Confidence            5

>PF15065 NCU-G1: Lysosomal transcription factor, NCU-G1

Probab=93.05  E-value=0.049  Score=48.89  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=25.8

Q ss_pred             ccccceeEeEEeeecCcccceeEecccccc
Q 045713           65 ILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        65 ~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      +.-..+.|-|.++++..+..+.+++|++..
T Consensus       276 ~~~~~~nvSFG~~gDgfY~~t~ylsWt~~~  305 (350)
T PF15065_consen  276 LNLQGLNVSFGTSGDGFYWATNYLSWTFLI  305 (350)
T ss_pred             cceEEEEEEeccCCCCcccccceEEEEEec
Confidence            344459999999999999999999999976

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.64  E-value=0.042  Score=41.62  Aligned_cols=32  Identities=25%  Similarity=0.347  Sum_probs=27.9

Q ss_pred             cc-ceeeeccCceEEEEEEcCCCceEEEEEEccC
Q 045713          196 FK-ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD  228 (274)
Q Consensus       196 f~-~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~  228 (274)
                      |. +-|+.|+.|+||+|.+.+ |+.||||..+.+
T Consensus        14 fd~~PlasASiaQVh~a~l~~-g~~VaVKV~rP~   46 (119)
T PF03109_consen   14 FDPEPLASASIAQVHRARLKD-GEEVAVKVQRPG   46 (119)
T ss_pred             CCcchhhheehhhheeeeecc-cchhhhhhcchH
Confidence            44 679999999999999976 899999998765

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF15102 TMEM154: TMEM154 protein family

Probab=92.29  E-value=0.14  Score=39.85  Aligned_cols=30  Identities=23%  Similarity=0.461  Sum_probs=14.6

Q ss_pred             cEEEehhhhhhhHHHHHhhhheeeeeehhh
Q 045713          138 PIIIVFPIVAVFAVALITISGAIYIVQKKK  167 (274)
Q Consensus       138 ~~~i~~~~~~~~~~~~~~~~~~~~~~rr~~  167 (274)
                      .+.|+++++++++++++++++++++||+|.
T Consensus        58 iLmIlIP~VLLvlLLl~vV~lv~~~kRkr~   87 (146)
T PF15102_consen   58 ILMILIPLVLLVLLLLSVVCLVIYYKRKRT   87 (146)
T ss_pred             EEEEeHHHHHHHHHHHHHHHheeEEeeccc
Confidence            566666644444444444444444444443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=92.03  E-value=0.12  Score=45.99  Aligned_cols=72  Identities=21%  Similarity=0.287  Sum_probs=44.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .+||+|.||..+.|+---.+..||||.=...+  ..-+...|-....-| ..++|.+.+-+-.++..-.||+|++
T Consensus        34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            68999999999999865558999999643321  112233344443333 3466666554444444456777764

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=91.62  E-value=0.38  Score=39.19  Aligned_cols=68  Identities=22%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccc-eeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQ-LHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~-l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ..|++|.+|.||.|.+.  |..+|+|.-+.++.  +..+..|.+++..+.--++.+ ++.|    ++-.+.|||..+
T Consensus        28 ~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G   96 (201)
T COG2112          28 KELAKGTTSVVYLGEWR--GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDG   96 (201)
T ss_pred             hhhhcccccEEEEeecc--CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcC
Confidence            57999999999999997  66899998776543  567888998888777655543 3333    223455888754

>PLN02876 acyl-CoA dehydrogenase

Probab=90.85  E-value=0.66  Score=46.90  Aligned_cols=76  Identities=14%  Similarity=0.230  Sum_probs=53.5

Q ss_pred             ceeeeccCceEEEEEEcCCC--ceEEEEEEccCC-HHhHHHHHHHHHHhcCCC-CCCc--cceeeEEEeC---CeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSG--LPIAVKKISHDS-EQWMKEFVSEIVSMGALR-HRNL--VQLHGYCRRK---QELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g--~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~Nl--v~l~g~~~~~---~~~~LV~  268 (274)
                      ..++.|.+..+|+-.....+  ..+.+|+..... ......+.+|..+|..+. |.++  .+.+++|...   +..++||
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            56888999999987765422  356667654332 123456889999999885 6665  7788888764   4568999


Q ss_pred             eccCC
Q 045713          269 NYMHN  273 (274)
Q Consensus       269 Ey~~~  273 (274)
                      ||+++
T Consensus       124 E~v~G  128 (822)
T PLN02876        124 EYLEG  128 (822)
T ss_pred             EecCC
Confidence            99875

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=90.85  E-value=1  Score=40.58  Aligned_cols=63  Identities=24%  Similarity=0.387  Sum_probs=44.8

Q ss_pred             cEEEEEEeeCCCcEEEEEEEeCCCCCCC-CCeeeeecCcccccccceeEeEEeeecCcccceeEecccc
Q 045713           25 PMQIWIDYNGEEKLLNVTLAPIRVSKPN-RPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSF   92 (274)
Q Consensus        25 ~~~awi~y~~~~~~l~v~~~~~~~~~~~-~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF   92 (274)
                      ++.|.|+|-.  ++|.|.+.. ++ .|. .+-+-..++ .-.||..-|.|.||+||.....|.++++.-
T Consensus       189 PvRarItY~~--nvLtv~inn-Gm-tp~d~yE~C~rve-~~~lp~nGyFGvSAATGgLADDHDVl~Flt  252 (497)
T KOG3838|consen  189 PVRARITYYG--NVLTVMINN-GM-TPSDDYEFCVRVE-NLLLPPNGYFGVSAATGGLADDHDVLSFLT  252 (497)
T ss_pred             CceEEEEEec--cEEEEEEcC-CC-CCCCCcceeEecc-ceeccCCCeeeeeecccccccccceeeeEE
Confidence            5789999975  689998853 33 233 223333332 125688999999999999999999987653

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=89.28  E-value=0.092  Score=49.00  Aligned_cols=63  Identities=22%  Similarity=0.381  Sum_probs=51.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      .++|.|+||.|+.+....++...|||+|... ........++|+..++++-|++++++.-.+..
T Consensus        55 ~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   55 QCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             ccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            7899999999999988776778999999755 34456678899999999999999987654443

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=89.13  E-value=0.067  Score=36.99  Aligned_cols=15  Identities=27%  Similarity=0.556  Sum_probs=11.4

Q ss_pred             cChhhHHHhhcCccc
Q 045713          184 FSYKDLYKATKGFKE  198 (274)
Q Consensus       184 ~~~~el~~at~~f~~  198 (274)
                      ++|+|...|-..|.+
T Consensus        57 ~TYEDP~qAV~eFAk   71 (75)
T PF14575_consen   57 HTYEDPNQAVREFAK   71 (75)
T ss_dssp             GGSSSHHHHHHHCSS
T ss_pred             ccccCHHHHHHHHHh
Confidence            578888888877764

...

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=88.38  E-value=0.75  Score=38.25  Aligned_cols=64  Identities=30%  Similarity=0.483  Sum_probs=47.4

Q ss_pred             cCccceeeeccC-ceEEEEEEcCCCceEEEEEEccC------------C---H------HhHHHHHHHHHHhcCCC---C
Q 045713          194 KGFKELIGKGGF-GKVYKGVLSTSGLPIAVKKISHD------------S---E------QWMKEFVSEIVSMGALR---H  248 (274)
Q Consensus       194 ~~f~~~lG~G~f-G~Vy~g~~~~~g~~vAvK~l~~~------------~---~------~~~~~f~~E~~~l~~l~---H  248 (274)
                      ..|-+.||.|.- |.||+..+.  |..+|+|.+...            .   .      .....|..|+...++|+   +
T Consensus        39 I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   39 IEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             EeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            345588999999 999999997  679999994321            0   0      12346889999888874   4


Q ss_pred             CCc--cceeeEEE
Q 045713          249 RNL--VQLHGYCR  259 (274)
Q Consensus       249 ~Nl--v~l~g~~~  259 (274)
                      .++  |++.||..
T Consensus       117 e~~~Avkc~Gyl~  129 (207)
T PF13095_consen  117 EGLWAVKCHGYLL  129 (207)
T ss_pred             cCceEEEeeEEEE
Confidence            466  99999973

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=88.16  E-value=0.09  Score=39.84  Aligned_cols=17  Identities=18%  Similarity=-0.007  Sum_probs=6.3

Q ss_pred             HHHhhhheeeeeehhhh
Q 045713          152 ALITISGAIYIVQKKKY  168 (274)
Q Consensus       152 ~~~~~~~~~~~~rr~~~  168 (274)
                      +++++++++++||++|+
T Consensus        78 Ig~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   78 IGIILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            33344444444444443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=86.47  E-value=0.28  Score=37.66  Aligned_cols=6  Identities=33%  Similarity=1.071  Sum_probs=2.3

Q ss_pred             Eehhhh
Q 045713          141 IVFPIV  146 (274)
Q Consensus       141 i~~~~~  146 (274)
                      ++++++
T Consensus         3 ~l~~ii    8 (130)
T PF12273_consen    3 VLFAII    8 (130)
T ss_pred             eeHHHH
Confidence            333333

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PRK10593 hypothetical protein; Provisional

Probab=86.05  E-value=2.6  Score=37.14  Aligned_cols=72  Identities=13%  Similarity=0.024  Sum_probs=50.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCC---CCccceeeEEEe---CCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRH---RNLVQLHGYCRR---KQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H---~Nlv~l~g~~~~---~~~~~LV~Ey~  271 (274)
                      +.||.|..+.||+-...+ + .+.+|..+...  ....|.+|...|..|.-   -.+.+.+++|..   .+..+||||++
T Consensus        20 ~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i   95 (297)
T PRK10593         20 ECISEQPYAALWALYDSQ-G-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL   95 (297)
T ss_pred             eecCCccceeEEEEEcCC-C-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence            579999999999987653 3 45666643311  13478889888877743   357788888854   35689999998


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      ++
T Consensus        96 ~G   97 (297)
T PRK10593         96 RG   97 (297)
T ss_pred             CC
Confidence            75

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=85.65  E-value=2  Score=36.15  Aligned_cols=70  Identities=14%  Similarity=0.110  Sum_probs=49.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCc--cceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNL--VQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nl--v~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ..+|+|..+.||+..    +....+|......  ...+..+|...+..+..-.+  .+.++++...+...+|||++++
T Consensus         7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEec----CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            578999999999831    3456677765432  12345778888877754444  5667777777778899999875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=84.97  E-value=0.18  Score=46.93  Aligned_cols=10  Identities=10%  Similarity=0.813  Sum_probs=6.4

Q ss_pred             EecccccccC
Q 045713           87 ILGWSFSRIG   96 (274)
Q Consensus        87 i~~WsF~s~~   96 (274)
                      +..|.....+
T Consensus       294 v~aW~yt~vS  303 (439)
T PF02480_consen  294 VEAWTYTLVS  303 (439)
T ss_dssp             EEEEEEEEEE
T ss_pred             eeeeEEEEEE
Confidence            6677776543

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=83.44  E-value=2.8  Score=36.82  Aligned_cols=50  Identities=26%  Similarity=0.361  Sum_probs=39.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALR  247 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~  247 (274)
                      +.||.|+++.||.++..+.++.+|+|.....   .....+++.+|...+..+.
T Consensus        18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~   70 (288)
T PF14531_consen   18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFP   70 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGST
T ss_pred             cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhc
Confidence            7899999999999999988999999987543   2334677777776665543

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=83.39  E-value=1.1  Score=32.54  Aligned_cols=10  Identities=0%  Similarity=0.006  Sum_probs=4.0

Q ss_pred             hhheeeeeeh
Q 045713          156 ISGAIYIVQK  165 (274)
Q Consensus       156 ~~~~~~~~rr  165 (274)
                      ++.+|+++||
T Consensus        85 ~l~w~f~~r~   94 (96)
T PTZ00382         85 FLCWWFVCRG   94 (96)
T ss_pred             HHhheeEEee
Confidence            3334444443

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=83.39  E-value=0.25  Score=29.01  Aligned_cols=27  Identities=22%  Similarity=0.265  Sum_probs=11.9

Q ss_pred             EEEehhhhhhhHHHHHhhhheeeeeeh
Q 045713          139 IIIVFPIVAVFAVALITISGAIYIVQK  165 (274)
Q Consensus       139 ~~i~~~~~~~~~~~~~~~~~~~~~~rr  165 (274)
                      +.++++++++++++++.++.+.+++||
T Consensus         6 IaIIv~V~vg~~iiii~~~~YaCcykk   32 (38)
T PF02439_consen    6 IAIIVAVVVGMAIIIICMFYYACCYKK   32 (38)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            344444444444444444444444333

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=82.30  E-value=3.9  Score=33.84  Aligned_cols=72  Identities=13%  Similarity=0.083  Sum_probs=46.4

Q ss_pred             ceeeeccCceEEEEEEcC------CCceEEEEEEccCC-----H-----------------HhHHHHH----HHHHHhcC
Q 045713          198 ELIGKGGFGKVYKGVLST------SGLPIAVKKISHDS-----E-----------------QWMKEFV----SEIVSMGA  245 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~------~g~~vAvK~l~~~~-----~-----------------~~~~~f~----~E~~~l~~  245 (274)
                      ..||.|.=+.||.|.-.+      .+..+|||..+...     .                 ..++.+.    +|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            368888889999997543      24789999864210     0                 0122223    78888888


Q ss_pred             CCC--CCccceeeEEEeCCeEEEEEeccCC
Q 045713          246 LRH--RNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       246 l~H--~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +..  -++.+++++    ..-+|||||+.+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~  108 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGD  108 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCC
Confidence            753  355555543    445899999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=81.07  E-value=5.7  Score=32.52  Aligned_cols=72  Identities=11%  Similarity=0.107  Sum_probs=49.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCC--CccceeeEEEeC---CeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHR--NLVQLHGYCRRK---QELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~--Nlv~l~g~~~~~---~~~~LV~Ey~~  272 (274)
                      +.++.|..+.||+....+  ..+++|.....  .......+|..++..+...  .+.++++++...   ...+++|++++
T Consensus         3 ~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             ccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            468899999999999874  48899987554  3456677888887776433  345677655433   34688999876


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus        79 g   79 (239)
T PF01636_consen   79 G   79 (239)
T ss_dssp             S
T ss_pred             c
Confidence            4

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]

Probab=80.76  E-value=1.1  Score=43.05  Aligned_cols=16  Identities=13%  Similarity=0.196  Sum_probs=7.9

Q ss_pred             CcEEEehhhhhhhHHH
Q 045713          137 GPIIIVFPIVAVFAVA  152 (274)
Q Consensus       137 ~~~~i~~~~~~~~~~~  152 (274)
                      ..+||++++++.++++
T Consensus       267 ~NlWII~gVlvPv~vV  282 (684)
T PF12877_consen  267 NNLWIIAGVLVPVLVV  282 (684)
T ss_pred             CCeEEEehHhHHHHHH
Confidence            4455555555444433

In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=80.70  E-value=1  Score=42.74  Aligned_cols=84  Identities=21%  Similarity=0.163  Sum_probs=60.3

Q ss_pred             HHHhhcCccceeee--ccCceEEEEEE--cCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeC
Q 045713          189 LYKATKGFKELIGK--GGFGKVYKGVL--STSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK  261 (274)
Q Consensus       189 l~~at~~f~~~lG~--G~fG~Vy~g~~--~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~  261 (274)
                      .....-++...+|+  |.+|.||.+..  +.++..+|+|.-+.-  .......=.+|.....++ .|.|.++....+..+
T Consensus       111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~  190 (524)
T KOG0601|consen  111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS  190 (524)
T ss_pred             hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC
Confidence            33333344567899  99999999988  667888999984432  222233345566666666 499999988888889


Q ss_pred             CeEEEEEeccC
Q 045713          262 QELLLVYNYMH  272 (274)
Q Consensus       262 ~~~~LV~Ey~~  272 (274)
                      +.+++-.|++.
T Consensus       191 ~~lfiqtE~~~  201 (524)
T KOG0601|consen  191 GILFIQTELCG  201 (524)
T ss_pred             Ccceeeecccc
Confidence            99999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	274
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-05
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		4e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		7e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		7e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		7e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		7e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		7e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		8e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		8e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		8e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		8e-04
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		8e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		8e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		8e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		8e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 164 QKKKYEELYEDWESEYGPQ-------RFSYKDLYKATKGF--KELIXXXXXXXXXXXXLS 214
           ++KK ++ + D  +E  P+       RFS ++L  A+  F  K ++            L+
Sbjct: 1   RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 215 TSGLPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
              L +AVK++  +  Q  + +F +E+  +    HRNL++L G+C    E LLVY YM N
Sbjct: 61  DGTL-VAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 119

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 173 EDWESEYGP-QRFSYKDLYKATKGF--KELIXXXXXXXXXXXXLSTSGLPIAVKKISHDS 229
           ED E   G  +RFS ++L  A+  F  K ++            L+  G  +AVK++  + 
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLA-DGXLVAVKRLKEER 66
Query: 230 EQWMK-EFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            Q  + +F +E+  +    HRNL++L G+C    E LLVY YM N
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 111

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 41  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 99

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 42  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 100

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 39  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 97

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 67  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 43  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 101

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 39  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 97

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 37  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 95

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 40  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 98

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 36  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 35  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 93

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 36  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 36  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 34  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 92

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 54  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 112

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ Y
Sbjct: 54  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 112

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 40  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 92

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 37  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 89

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 40  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 92

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 246 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 44  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 96

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 44  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 44  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 39  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 91

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 44  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 37  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 89

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 39  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 91

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 44  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 37  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 89

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 43  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 95

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 41  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 93

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 39  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 39  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 41  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 93

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 39  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
           + +S DL +G   +I I YN    LL  +L  +  S+    +LS  +D++  L + + VG
Sbjct: 150 ATVSWDLANGENAEILITYNAATSLLVASL--VHPSRRTSYILSERVDITNELPEYVSVG 207
Query: 74  FSASTGILTSNQYI-----LGWSFS 93
           FSA+TG+  S  YI     L WSF+
Sbjct: 208 FSATTGL--SEGYIETHDVLSWSFA 230

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 52  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 104

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 39  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 41  LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 93

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 218 LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           L +AVK +  D+ + ++EF+ E   M  ++H NLVQL G C R+    ++  +M
Sbjct: 285 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 337

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 214 STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC----RRKQELLLVY 268
             +G  +AVKK+ H +E+ +++F  EI  + +L+H N+V+  G C    RR  +L++ +
Sbjct: 39  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEF 97

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	274
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-38
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-37
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-33
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	4e-25
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	6e-24
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	2e-23
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	8e-23
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	1e-22
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	1e-22
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	3e-22
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	6e-22
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	7e-22
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	7e-22
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	1e-21
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	1e-21
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	1e-21
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	2e-21
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	4e-21
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	4e-21
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	5e-21
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	7e-21
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	1e-20
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	2e-20
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-20
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-19
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	3e-19
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	9e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-18
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	1e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-16
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-15
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-15
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	4e-15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-15
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-15
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-14
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-14
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-14
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-14
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-14
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-14
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	8e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-13
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-13
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-13
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-13
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-13
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-13
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-12
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-12
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-12
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-12
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-12
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	9e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-11
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-11
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-10
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-10
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-09
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	1e-09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-09
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	7e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-08
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-08
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-07
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-07
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	8e-07
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	9e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-07
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-06
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	1e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-05
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  134 bits (340), Expect = 8e-38
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 182 QRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSE 239
            R    DL +AT  F    LIG G FGKVYKGVL   G  +A+K+ + +S Q ++EF +E
Sbjct: 27  YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETE 85

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           I ++   RH +LV L G+C  + E++L+Y YM N
Sbjct: 86  IETLSFCRHPHLVSLIGFCDERNEMILIYKYMEN 119

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  134 bits (339), Expect = 1e-37
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 173 EDWESEYG-PQRFSYKDLYKATKGFKE--LIGKGGFGKVYKGVLSTSGLPIAVKKISHDS 229
           ED E   G  +RFS ++L  A+  F    ++G+GGFGKVYKG L+  G  +AVK++  + 
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEER 66

Query: 230 EQ-WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK 274
            Q    +F +E+  +    HRNL++L G+C    E LLVY YM N 
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 112

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  123 bits (311), Expect = 1e-33
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 14/107 (13%)

Query: 180 GPQRFSYKDLYKATKGFKE--------LIGKGGFGKVYKGVLSTSGLPIAVKKISH---- 227
               FS+ +L   T  F E         +G+GGFG VYKG ++     +AVKK++     
Sbjct: 11  RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDI 68

Query: 228 DSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK 274
            +E+  ++F  EI  M   +H NLV+L G+     +L LVY YM N 
Sbjct: 69  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score = 99.5 bits (247), Expect = 4e-25
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 17  SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSA 76
             D+ SG      I Y+G  ++L V L+       +  +LS  +D+ Q L +++ VG SA
Sbjct: 162 DSDIFSGKIATARISYDGSAEILTVVLSY---PDGSDYILSHSVDMRQNLPESVRVGISA 218

Query: 77  STGILTS-NQYILGWSFSRIGEAQNLDISKLPILP 110
           STG       YIL W FS   ++ ++  +  P + 
Sbjct: 219 STGNNQFLTVYILSWRFSSNLQSTSVKAAMEPEIT 253

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score = 96.4 bits (239), Expect = 6e-24
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
              S DL +    ++ I Y+    LL  +L     S+    +LS  +DL   L + + +G
Sbjct: 150 KTTSWDLANNKVAKVLITYDASTSLLVASLVY--PSQRTSNILSDVVDLKTSLPEWVRIG 207

Query: 74  FSASTGILTSNQ--YILGWSFSRIGEAQNLDISKLPI 108
           FSA+TG+    +   +L WSF+      + +I  L +
Sbjct: 208 FSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDL 244

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score = 92.1 bits (228), Expect = 2e-23
 Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 13/100 (13%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
               D Q+G      I YN   K L+VT      +      LS  ++L  +L + + VG 
Sbjct: 36  TAKWDWQNGKIATAHISYNSVSKRLSVTSYY---AGSKPATLSYDIELHTVLPEWVRVGL 92

Query: 75  SASTGILTSNQYILGWSFSRIGEAQNLDISKLPILPPPPS 114
           SASTG       +  WSF+          S L        
Sbjct: 93  SASTGQDKERNTVHSWSFT----------SSLWTNVAKKE 122

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score = 92.9 bits (230), Expect = 8e-23
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
            +   L +G    + I Y+   K+L+V L     S      ++  +DL Q+L ++++VGF
Sbjct: 150 TVPFTLDNGGIANVVIKYDASTKILHVVLVF--PSLGTIYTIADIVDLKQVLPESVNVGF 207

Query: 75  SASTG-------ILTSNQYILGWSFSRIGEAQN 100
           SA+TG         T    IL WSFS      N
Sbjct: 208 SAATGDPSGKQRNATETHDILSWSFSASLPGTN 240

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score = 92.5 bits (229), Expect = 1e-22
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
                D  +G   ++ I Y+    LL  +L     S+    ++S  +DL  +L + + VG
Sbjct: 149 KTTRWDFVNGENAEVLITYDSSTNLLVASLVY--PSQKTSFIVSDTVDLKSVLPEWVSVG 206

Query: 74  FSASTGILTSN---QYILGWSFS----RIGEAQNLDISKLPI 108
           FSA+TGI   N     +L WSF+        ++ L+++ L +
Sbjct: 207 FSATTGINKGNVETNDVLSWSFASKLSDETTSEGLNLANLVL 248

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score = 92.2 bits (228), Expect = 1e-22
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
                L +G    + I Y+   K+L+V L     S      ++  +D+ Q+L D + VG 
Sbjct: 155 TQPFQLDNGQVANVVIKYDAPSKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGL 212

Query: 75  SASTGI---LTSNQYILGWSFS 93
           S +TG          +  WSF 
Sbjct: 213 SGATGAQRDAAETHDVYSWSFQ 234

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score = 91.4 bits (226), Expect = 3e-22
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
            +  +  +G    ++I Y    K L  +L     S     ++   +D+  +L + +  GF
Sbjct: 153 TVPWNWTNGEVANVFISYEASTKSLTASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGF 210

Query: 75  SASTGI---LTSNQYILGWSFSRIGEA 98
           SA+TGI         +L WSF      
Sbjct: 211 SATTGIDKGYVQTNDVLSWSFESNLPG 237

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score = 91.0 bits (225), Expect = 6e-22
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 5/95 (5%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
            +   L +G   ++ I YN   KLL  +L     S     +L+  +DLS +L + + VGF
Sbjct: 155 TVKWSLANGEAAKVLITYNSAVKLLVASLVY--PSSKTSFILADIVDLSSVLPEWVRVGF 212

Query: 75  SASTGI---LTSNQYILGWSFSRIGEAQNLDISKL 106
           SA+TG          +  WSF+          S  
Sbjct: 213 SAATGASGGKIETHDVFSWSFASKLAGXXTKDSSF 247

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score = 90.7 bits (224), Expect = 7e-22
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
               D Q+G      I YN   K L+V  +       +  ++S  ++L+ +  B + VGF
Sbjct: 156 ASKWDWQNGKTATAHISYNSASKRLSVVSSY---PNSSPVVVSFDVELNNVBPBWVRVGF 212

Query: 75  SASTGILTSNQYILGWSFSRIGEAQNLD 102
           SA+TG  T    IL WSF         +
Sbjct: 213 SATTGQYTQTNNILAWSFRSSLMGYQAN 240

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score = 91.0 bits (225), Expect = 7e-22
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +  + + G  + + + YN   + ++V           R  LS  +DL+ IL + + VG
Sbjct: 167 KVVRWERREGKTLNVLVTYNPSTRTIDVVAT---YPDGQRYQLSHVVDLTTILPEWVRVG 223

Query: 74  FSASTGILTSNQYILGWSFS 93
           FSA++G       +  WSF+
Sbjct: 224 FSAASGEQFQTHNLESWSFT 243

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score = 89.8 bits (222), Expect = 1e-21
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
                D+  G    I I Y    K L  +L            +S  +DL  IL + + VG
Sbjct: 149 KTTPFDMVYGEKANIVITYQASTKALAASLVF--PVSQTSYAVSARVDLRDILPEYVRVG 206

Query: 74  FSASTGI---LTSNQYILGWSFS 93
           FSA+TG+   +     I+ WSF+
Sbjct: 207 FSATTGLNAGVVETHDIVSWSFA 229

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score = 89.9 bits (222), Expect = 1e-21
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAP---IRVSKPNRPLLSTPLDLSQILLDTM 70
           +  S  LQ+G    + I +N    +L V+L         +     LS  + L  ++ + +
Sbjct: 148 NTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWV 207

Query: 71  HVGFSASTGILTSNQYILGWSFS 93
            +GFSA+TG   +   +L WSF 
Sbjct: 208 RIGFSATTGAEYAAHEVLSWSFH 230

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score = 89.4 bits (221), Expect = 1e-21
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +  +  SG  +++ + Y+   K L+V +        +   ++  +DL   L + +  G
Sbjct: 149 KTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTN---DNGDITTIAQVVDLKAKLPERVKFG 205

Query: 74  FSASTGIL-TSNQYILGWSFS 93
           FSAS  +       I  WSF+
Sbjct: 206 FSASGSLGGRQIHLIRSWSFT 226

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score = 89.5 bits (221), Expect = 2e-21
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 10  SDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDT 69
                N      +G    + I Y+     L V L         +  +S  + L + + + 
Sbjct: 140 PYVNENCDFHKYNGEKTDVQITYDSSNNDLRVFLHF--TVSQVKCSVSATVHLEKEVDEW 197

Query: 70  MHVGFSASTGI---LTSNQYILGWSFSRIGEAQNLDI 103
           + VGFS ++G+    T    +L WSFS     +  +I
Sbjct: 198 VSVGFSPTSGLTEDTTETHDVLSWSFSSKFRNKLSNI 234

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score = 88.2 bits (218), Expect = 4e-21
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 15/101 (14%)

Query: 17  SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSA 76
            +    G   ++ I YN   K+ +V+L+    S      +ST ++L + + D + VGFSA
Sbjct: 124 DVHDYDGQNAEVRITYNSSTKVFSVSLSNP--STGKSNNVSTTVELEKEVYDWVSVGFSA 181

Query: 77  STGILTSN---QYILGWSFSRIGEAQNLDISKLPILPPPPS 114
           ++G    +     +L WSFS          SK   L    S
Sbjct: 182 TSGAYQWSYETHDVLSWSFS----------SKFINLKDQKS 212

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score = 87.9 bits (217), Expect = 4e-21
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 8   YFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILL 67
                  + +    +G   ++ I Y+  +  L V+L     S   +  +S  + L + + 
Sbjct: 136 IRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLLY--PSSEEKCHVSATVPLEKEVE 193

Query: 68  DTMHVGFSASTGI---LTSNQYILGWSFS 93
           D + VGFSA++G     T    +L WSFS
Sbjct: 194 DWVSVGFSATSGSKKETTETHNVLSWSFS 222

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score = 88.3 bits (218), Expect = 5e-21
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 9/102 (8%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
              S  L +G   +I I YN    LL  +L     S+    ++S  +D++  L + + +G
Sbjct: 150 RTASWGLANGQNAEILITYNAATSLLVASLVH--PSRRTSYIVSERVDITNELPEYVSIG 207

Query: 74  FSASTGI---LTSNQYILGWSFS----RIGEAQNLDISKLPI 108
           FSA+TG+    T    +L WSF+         + LDI+   +
Sbjct: 208 FSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLV 249

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score = 87.5 bits (216), Expect = 7e-21
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
            ++ +  SG+  +  I Y+ + K+L V +            +S  +DL  +L + + VGF
Sbjct: 148 AVNWNRVSGSLEKATIIYDSDTKILTVVMTH---QNGQITTISQEIDLKTVLPEKVSVGF 204

Query: 75  SAST-GILTSNQYILGWSFSRIGEA 98
           SA+T         I  WSF+   + 
Sbjct: 205 SATTWNPERERHDIYSWSFTSTLKE 229

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score = 87.2 bits (215), Expect = 1e-20
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +  D ++G    + I Y    K L V L+    S     +++  +DL  IL + + VG
Sbjct: 156 KTVKWDWRNGEVADVVITYRAPTKSLTVCLSY--PSDGTSNIITASVDLKAILPEWVSVG 213

Query: 74  FSASTGILTSNQ--YILGWSFSRIGEAQN 100
           FS   G     +   +L W F+   EA N
Sbjct: 214 FSGGVGNAAEFETHDVLSWYFTSNLEANN 242

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score = 86.4 bits (213), Expect = 2e-20
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDT--MH 71
             +   L++G    + I Y+   K+LNV LA    S      LS  +DL Q   ++  ++
Sbjct: 149 KTLHFQLENGGVANVVIKYDSPTKILNVVLAF--HSVGTVYTLSNIVDLKQEFPNSEWVN 206

Query: 72  VGFSASTGI---LTSNQYILGWSFSRIGEAQN 100
           VG SA+TG          I+ WSF+   +  N
Sbjct: 207 VGLSATTGYQKNAVETHEIISWSFTSSLQETN 238

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 87.1 bits (216), Expect = 3e-20
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEI 240
              ++LY  +   +  E+  +G FG V+K  L      +AVK      +Q W  E+  E+
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEY--EV 69

Query: 241 VSMGALRHRNLVQLHGYCRR----KQELLLVYNYMHNK 274
            S+  ++H N++Q  G  +R      +L L+  +    
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 84.7 bits (210), Expect = 3e-19
 Identities = 19/78 (24%), Positives = 38/78 (48%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             E++GKG FG+  K     +G  + +K++    E+  + F+ E+  M  L H N+++  
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73

Query: 256 GYCRRKQELLLVYNYMHN 273
           G   + + L  +  Y+  
Sbjct: 74  GVLYKDKRLNFITEYIKG 91

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 83.4 bits (205), Expect = 3e-19
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
                ++Q+G      I YN  +K L+  ++       +   +S  +DL  +L + + VG
Sbjct: 36  KTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSY---PNADSATVSYDVDLDNVLPEWVRVG 92

Query: 74  FSASTGILTSNQYILGWSFSR 94
            SASTG+      IL WSF+ 
Sbjct: 93  LSASTGLYKETNTILSWSFTS 113

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score = 82.1 bits (202), Expect = 9e-19
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 17  SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSA 76
           + D    +     I Y+   K+L V L+          +LS  +DL+++L   + +GFSA
Sbjct: 163 NDDAYGSSIATAHITYDARSKILTVLLSY---EHGRDYILSHVVDLAKVLPQKVRIGFSA 219

Query: 77  STGILTSNQYILGWSFS 93
             G      YIL W F 
Sbjct: 220 GVG-YDEVTYILSWHFF 235

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 81.0 bits (200), Expect = 7e-18
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEI 240
            +  +        K  ELIG+G +G VYKG L     P+AVK  S  + Q ++ E    I
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINE--KNI 58

Query: 241 VSMGALRHRNLVQLHGYCRR-----KQELLLVYNYMHN 273
             +  + H N+ +      R     + E LLV  Y  N
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPN 96

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score = 79.0 bits (194), Expect = 1e-17
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 8   YFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILL 67
             S      +      N   + I Y    K L  +L     S      +++ +DL +IL 
Sbjct: 150 VKSINAERWNKRYGLNNVANVEIIYEASSKTLTASLTY--PSDQTSISVTSIVDLKEILP 207

Query: 68  DTMHVGFSASTGI-LTSNQYILGWSFS 93
           + + VGFS ST I   +   +L W F+
Sbjct: 208 EWVSVGFSGSTYIGRQATHEVLNWYFT 234

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKI----SHDSEQWMKEFVSEIVSMGALRHRNL 251
            +E+IG GGFGKVY+      G  +AVK        D  Q ++    E      L+H N+
Sbjct: 11  LEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           + L G C ++  L LV  +   
Sbjct: 69  IALRGVCLKEPNLCLVMEFARG 90

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 16/104 (15%)

Query: 172 YEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDS 229
            +D +         + DL       KE IG G FG V++      G  +AVK +      
Sbjct: 29  GDDMD-------IPWCDLN-----IKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFH 74

Query: 230 EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            + + EF+ E+  M  LRH N+V   G   +   L +V  Y+  
Sbjct: 75  AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 23/114 (20%)

Query: 177 SEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ----- 231
            +      +  ++      +++ IGKGGFG V+KG L      +A+K +     +     
Sbjct: 9   PKSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63

Query: 232 --WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLV---------YNYMHNK 274
               +EF  E+  M  L H N+V+L+G         +V         Y+ + +K
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDK 115

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVL----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNL 251
           F + +GKG FG V           +G  +AVKK+ H +E+ +++F  EI  + +L+H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73

Query: 252 VQLHGYCRRKQE--LLLVYNYMHN 273
           V+  G C       L L+  Y+  
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPY 97

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 17/112 (15%)

Query: 164 QKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVK 223
           +  +     ++W+         ++ L        ELIGKG FG+VY G        +A++
Sbjct: 17  KASQTSIFLQEWD-------IPFEQLE-----IGELIGKGRFGQVYHGRWHG---EVAIR 61

Query: 224 KI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            I    D+E  +K F  E+++    RH N+V   G C     L ++ +    
Sbjct: 62  LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKG 113

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKI-SHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
             E IG+G FG+V+ G L      +AVK            +F+ E   +    H N+V+L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 255 HGYCRRKQELLLVYNYMHN 273
            G C +KQ + +V   +  
Sbjct: 178 IGVCTQKQPIYIVMELVQG 196

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG-------LPIAVKKISHDSEQWMKEFVSEIVSMGALRH 248
           F E +G+G F K++KGV    G         + +K +      + + F      M  L H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71

Query: 249 RNLVQLHGYCRRKQELLLVYNYMHN 273
           ++LV  +G C    E +LV  ++  
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKF 96

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score = 72.1 bits (176), Expect = 4e-15
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 19  DLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSAST 78
           D  +G      I Y    K L  +L     S      ++  +DL +IL + + VGFSA+T
Sbjct: 162 DWINGGVAFATITYLAPNKTLIASLVY--PSNQTTFSVAASVDLKEILPEWVRVGFSAAT 219

Query: 79  GILT--SNQYILGWSFS 93
           G  T      +L WSF+
Sbjct: 220 GYPTEVETHDVLSWSFT 236

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 72.7 bits (179), Expect = 4e-15
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            K  +G G +G+VY+GV     L +AVK +  D+ + ++EF+ E   M  ++H NLVQL 
Sbjct: 17  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C R+    ++  +M  
Sbjct: 76  GVCTREPPFYIITEFMTY 93

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 73.2 bits (180), Expect = 4e-15
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVL----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNL 251
           F + +GKG FG V           +G  +AVKK+ H +E+ +++F  EI  + +L+H N+
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104

Query: 252 VQLHGYCRRKQE--LLLVYNYMHN 273
           V+  G C       L L+  Y+  
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPY 128

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 72.8 bits (179), Expect = 4e-15
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNL 251
           +   +GKG FG V        G      +AVK++ H      ++F  EI  + AL    +
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86

Query: 252 VQLHGYCRRKQE--LLLVYNYMHN 273
           V+  G         L LV  Y+ +
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPS 110

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 72.4 bits (178), Expect = 5e-15
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            +E++G+G FG V K         +A+K+I  +SE   K F+ E+  +  + H N+V+L+
Sbjct: 12  VEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLY 67

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C     + LV  Y   
Sbjct: 68  GACLNP--VCLVMEYAEG 83

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 182 QRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI-SHDSEQWMKEFVSEI 240
           QR   +D+        E +GKG +G+V++G     G  +AVK   S D + W +E   E+
Sbjct: 3   QRTVARDIT-----LLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRET--EL 53

Query: 241 VSMGALRHRNLVQLHGYCRRKQ----ELLLVYNYMHN 273
            +   LRH N++         +    +L L+ +Y   
Sbjct: 54  YNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 173 EDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW 232
           E+ + E     + Y +  +       ++GKG +G VY G   ++ + IA+K+I     ++
Sbjct: 6   EEGDCESDLLEYDY-EYDENGDR--VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY 62

Query: 233 MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            +    EI     L+H+N+VQ  G       + +    +  
Sbjct: 63  SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
            +++IG G  G+V  G L   G   +P+A+K +    +E+  ++F+SE   MG   H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           ++L G   R +  ++V  YM N
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMEN 134

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 71.7 bits (176), Expect = 2e-14
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            K  +G G +G+VY+GV     L +AVK +  D+ + ++EF+ E   M  ++H NLVQL 
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 282

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C R+    ++  +M  
Sbjct: 283 GVCTREPPFYIITEFMTY 300

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN 250
            K  +G+G FGKV+         +   + +AVK +   +    K+F  E   +  L+H +
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +V+ +G C     L++V+ YM +
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKH 101

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 70.6 bits (173), Expect = 3e-14
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKI-SHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
            +E IGKG FG+V++G     G  +AVK   S +   W +E  +EI     LRH N++  
Sbjct: 46  LQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF 101

Query: 255 HGYCRRKQ----ELLLVYNYMHN 273
                +      +L LV +Y  +
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEH 124

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 69.6 bits (171), Expect = 4e-14
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQ 253
           F   + +   G+++KG     G  I VK +     S +  ++F  E   +    H N++ 
Sbjct: 14  FLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71

Query: 254 LHGYCRR--KQELLLVYNYMHN 273
           + G C+        L+ ++M  
Sbjct: 72  VLGACQSPPAPHPTLITHWMPY 93

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN 250
            K  +G+G FGKV+             + +AVK +   SE   ++F  E   +  L+H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +V+  G C   + LL+V+ YM +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRH 127

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 70.1 bits (172), Expect = 5e-14
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKI-SHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
             + IGKG +G+V+ G     G  +AVK   + +   W +E  +EI     +RH N++  
Sbjct: 41  MVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGF 96

Query: 255 HGYCRR----KQELLLVYNYMHN 273
                +      +L L+ +Y  N
Sbjct: 97  IAADIKGTGSWTQLYLITDYHEN 119

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           F + +G G FG V  G        +A+K I   S     EF+ E   M  L H  LVQL+
Sbjct: 28  FLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLY 85

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C +++ + ++  YM N
Sbjct: 86  GVCTKQRPIFIITEYMAN 103

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 69.6 bits (171), Expect = 5e-14
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRN 250
             +++G G FG VYKG+    G    +P+A+K++    S +  KE + E   M ++ + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           + +L G C     + L+   M  
Sbjct: 79  VCRLLGIC-LTSTVQLITQLMPF 100

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 68.8 bits (169), Expect = 8e-14
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           F + IG G FG V+ G        +A+K I   +    ++F+ E   M  L H  LVQL+
Sbjct: 12  FVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLY 69

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C  +  + LV  +M +
Sbjct: 70  GVCLEQAPICLVTEFMEH 87

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
             +++G G FG+V  G L       + +A+K +    +E+  ++F+ E   MG   H N+
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           ++L G   + + +++V  YM N
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMEN 130

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             + +G G FG V  G        +AVK I   S     EF  E  +M  L H  LV+ +
Sbjct: 12  LLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFY 69

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C ++  + +V  Y+ N
Sbjct: 70  GVCSKEYPIYIVTEYISN 87

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRN 250
            +++IG G FG+VYKG+L TS     +P+A+K +    +E+   +F+ E   MG   H N
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +++L G   + + ++++  YM N
Sbjct: 108 IIRLEGVISKYKPMMIITEYMEN 130

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG-----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHR 249
           F E +G+  FGKVYKG L           +A+K +         +EF  E +    L+H 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           N+V L G   + Q L ++++Y  +
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSH 96

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             + IGKG FG V  G     G  +AVK I +D+    + F++E   M  LRH NLVQL 
Sbjct: 25  LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLL 80

Query: 256 GYC-RRKQELLLVYNYMHN 273
           G     K  L +V  YM  
Sbjct: 81  GVIVEEKGGLYIVTEYMAK 99

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQ 253
             + IG G FG VYKG        +AVK +  +  + Q ++ F +E+  +   RH N++ 
Sbjct: 28  VGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84

Query: 254 LHGYCRRKQELLLVYNYMHN 273
             GY     +L +V  +   
Sbjct: 85  FMGYS-TAPQLAIVTQWCEG 103

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKI-SHDSEQWMKEFVSEIVSMGALRHRN 250
               +G+G FGKV        G      +AVK +        + +   EI  +  L H N
Sbjct: 25  RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 84

Query: 251 LVQLHGYCRRKQE--LLLVYNYMHN 273
           +V+  G C       + L+  ++ +
Sbjct: 85  IVKYKGICTEDGGNGIKLIMEFLPS 109

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHR 249
               +G G FG+VY+G +       S L +AVK +    SEQ   +F+ E + +    H+
Sbjct: 34  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           N+V+  G   +     ++   M  
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAG 117

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 200 IGKGGFGKVYKGVLSTSG--LPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           +G G FG V KG          +AVK  K   +      E ++E   M  L +  +V++ 
Sbjct: 25  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C   +  +LV      
Sbjct: 85  GIC-EAESWMLVMEMAEL 101

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 68.0 bits (166), Expect = 4e-13
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 197 KELIGKGGFGKVYKGVLSTSG--LPIAVKKISHDSEQWMK-EFVSEIVSMGALRHRNLVQ 253
              +G G FG V +GV       + +A+K +   +E+    E + E   M  L +  +V+
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400

Query: 254 LHGYCRRKQELLLVYNYMHN 273
           L G C+ +  L+LV      
Sbjct: 401 LIGVCQAEA-LMLVMEMAGG 419

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 197 KELIGKGGFGKVYKGVLSTSG--LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQ 253
              +G G FG V +GV       + +A+K +     +   +E + E   M  L +  +V+
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 254 LHGYCRRKQELLLVYNYMHN 273
           L G C+ +  L+LV      
Sbjct: 75  LIGVCQAEA-LMLVMEMAGG 93

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 4/109 (3%)

Query: 169 EELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPI--AVKKIS 226
           ++ +     +  P    Y  L      F+++IG+G FG+V K  +   GL +  A+K++ 
Sbjct: 2   KKHHHHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK 61

Query: 227 HD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN 273
              S+   ++F  E+  +  L  H N++ L G C  +  L L   Y  +
Sbjct: 62  EYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 67.0 bits (164), Expect = 5e-13
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 196 FKELIGKGGFGKVYKGVL----STSGLPIAVKKI-SHDSEQWMKEFVSEIVSMGALRHRN 250
               +G+G FGKV           +G  +AVK + +    Q    +  EI  +  L H +
Sbjct: 35  KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH 94

Query: 251 LVQLHGYC--RRKQELLLVYNYMHN 273
           +++  G C       L LV  Y+  
Sbjct: 95  IIKYKGCCEDAGAASLQLVMEYVPL 119

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 66.5 bits (163), Expect = 5e-13
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD---SEQWMKEFVSEIVSMGALRHR 249
             E +G G FG V +G         + +AVK +  D     + M +F+ E+ +M +L HR
Sbjct: 22  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           NL++L+G       + +V      
Sbjct: 82  NLIRLYGVV-LTPPMKMVTELAPL 104

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 67.0 bits (164), Expect = 5e-13
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHR 249
               +G G FG+VY+G +       S L +AVK +    SEQ   +F+ E + +    H+
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           N+V+  G   +     ++   M  
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAG 158

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 66.6 bits (163), Expect = 6e-13
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRN 250
             +++G G FG V+KGV    G    +P+ +K I   S  Q  +     ++++G+L H +
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +V+L G C     L LV  Y+  
Sbjct: 77  IVRLLGLC-PGSSLQLVTQYLPL 98

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 66.1 bits (162), Expect = 7e-13
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
           F E+IG+G FG VY G L  +    +  AVK ++       + +F++E + M    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88

Query: 252 VQLHGYCRRKQE-LLLVYNYMHN 273
           + L G C R +   L+V  YM +
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKH 111

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 66.6 bits (163), Expect = 8e-13
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRN 250
             +++G G FG VYKG+    G    +P+A+K++   +  +  KE + E   M ++ + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           + +L G C     + L+   M  
Sbjct: 79  VCRLLGIC-LTSTVQLITQLMPF 100

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 66.2 bits (162), Expect = 9e-13
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 14/111 (12%)

Query: 177 SEYGPQRFSYKDLYKATK--------GFKELIGKGGFGKVYKGVL-----STSGLPIAVK 223
           +   P+ FS  D+Y   +             +G+G FG VY+GV            +A+K
Sbjct: 2   ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61

Query: 224 KISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            ++   S +   EF++E   M      ++V+L G   + Q  L++   M  
Sbjct: 62  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 112

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 11/89 (12%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRN 250
              ++GKG FG V +  L       + +AVK  K    +   ++EF+ E   M    H +
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86

Query: 251 LVQLHGYCRRKQ------ELLLVYNYMHN 273
           + +L G   R +        +++  +M +
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKH 115

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             + IGKG FG V  G     G  +AVK I +D+    + F++E   M  LRH NLVQL 
Sbjct: 197 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLL 252

Query: 256 GYC-RRKQELLLVYNYMHN 273
           G     K  L +V  YM  
Sbjct: 253 GVIVEEKGGLYIVTEYMAK 271

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVK--KISHDSEQWMKEFVSEIVSMGALRHRN 250
             +++G+G FG V +G L       L +AVK  K+ + S++ ++EF+SE   M    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 251 LVQLHGYCRRKQ-----ELLLVYNYMHN 273
           +++L G C         + +++  +M  
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKY 125

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 65.3 bits (160), Expect = 2e-12
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)

Query: 170 ELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVL-----STSGLPIAVKK 224
           ++ ED + E+  +               + +G+G FGKV K              +AVK 
Sbjct: 11  KILEDPKWEFPRKNLV----------LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60

Query: 225 ISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +  + S   +++ +SE   +  + H ++++L+G C +   LLL+  Y   
Sbjct: 61  LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
               IG+G FG V++G+  +     L +A+K   +  S+   ++F+ E ++M    H ++
Sbjct: 19  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           V+L G    +  + ++      
Sbjct: 79  VKLIGVI-TENPVWIIMELCTL 99

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 64.5 bits (158), Expect = 2e-12
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
              ++G+G FG+VY+GV +      + +AVK    D +    ++F+SE V M  L H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           V+L G    ++   ++      
Sbjct: 76  VKLIGII-EEEPTWIIMELYPY 96

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
           F E+IG+G FG VY G L  +    +  AVK ++       + +F++E + M    H N+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152

Query: 252 VQLHGYCRRKQE-LLLVYNYMHN 273
           + L G C R +   L+V  YM +
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKH 175

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
              +IGKG FG VY G         +  A+K +S     Q ++ F+ E + M  L H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 252 VQLHGYCRRKQE-LLLVYNYMHN 273
           + L G     +    ++  YM +
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCH 107

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHR 249
           +   IG+G FG+V++              +AVK +  + S     +F  E   M    + 
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           N+V+L G C   + + L++ YM  
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAY 134

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 181 PQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEI 240
           P  + Y++        +  +G+G FG+V++     +G   AVKK+  +  +     V E+
Sbjct: 48  PVDYEYREEVHWMTH-QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEEL 101

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           V+   L    +V L+G  R    + +    +  
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 64.4 bits (157), Expect = 5e-12
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 166 KKYEELYEDWESEYGPQRFSYK-----DLYKATKGFKELIGKGGFGKVYKGVLSTSGLPI 220
             Y++ YED   +Y PQ    K     D Y       E +G G FG V++ V   +G   
Sbjct: 24  NDYDKFYEDIWKKYVPQPVEVKQGSVYDYYD----ILEELGSGAFGVVHRCVEKATGRVF 79

Query: 221 AVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
             K I+           +EI  M  L H  L+ LH     K E++L+  ++
Sbjct: 80  VAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 63.4 bits (155), Expect = 5e-12
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             E +G G FG+V+ G  +     +AVK +   S      F++E   M  L+H+ LV+L+
Sbjct: 17  LVERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLY 74

Query: 256 GYCRRKQELLLVYNYMHN 273
                ++ + ++  YM N
Sbjct: 75  AVV-TQEPIYIITEYMEN 91

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQ 253
           F   IG+G F  VYKG+ + + + +A  ++     ++   + F  E   +  L+H N+V+
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89

Query: 254 LHGY----CRRKQELLLVYNYMHN 273
            +       + K+ ++LV   M +
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTS 113

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 64.1 bits (156), Expect = 9e-12
 Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNL 251
               IG+G FG V++G+  +     + +A+K   +  S+   ++F+ E ++M    H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           V+L G    +  + ++      
Sbjct: 454 VKLIGVI-TENPVWIIMELCTL 474

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            ++ +G G FG+V+    +     +AVK +   S   ++ F++E   M  L+H  LV+LH
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHT-KVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLH 249

Query: 256 GYCRRKQELLLVYNYMHN 273
                K+ + ++  +M  
Sbjct: 250 AVV-TKEPIYIITEFMAK 266

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 21/74 (28%), Positives = 36/74 (48%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
             +G G FGKVYK     +G   A K I   SE+ +++++ EI  +    H  +V+L G 
Sbjct: 25  GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84

Query: 258 CRRKQELLLVYNYM 271
                +L ++  + 
Sbjct: 85  YYHDGKLWIMIEFC 98

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            +  +G+G FG+V+ G  + +   +A+K +   +    + F+ E   M  LRH  LVQL+
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLY 245

Query: 256 GYCRRKQELLLVYNYMHN 273
                ++ + +V  YM  
Sbjct: 246 AVV-SEEPIYIVTEYMSK 262

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 164 QKKKYEELYEDWESEYGPQRFSYK-----DLYKATKGFKELIGKGGFGKVYKGVLSTSGL 218
               Y+    D   +Y PQ    K     D Y       E +G G FG V++     +G 
Sbjct: 128 VSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYD----IHEELGTGAFGVVHRVTERATGN 183

Query: 219 PIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
             A K +    E   +    EI +M  LRH  LV LH       E++++Y +M
Sbjct: 184 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            +  +G+G FG+V+ G  + +   +A+K +   +    + F+ E   M  LRH  LVQL+
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLY 328

Query: 256 GYCRRKQELLLVYNYMHN 273
                ++ + +V  YM  
Sbjct: 329 AVV-SEEPIYIVTEYMSK 345

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 196 FKELIGKGGFGKVYKGVL-------STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL- 246
             + +G+G FG+V                + +AVK +  D +E+ + + VSE+  M  + 
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98

Query: 247 RHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +H+N++ L G C +   L ++  Y   
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASK 125

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 21/129 (16%)

Query: 153 LITISGAIYIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGV 212
           +   S   Y     +  E    WE       F  ++L      F +++G G FGKV    
Sbjct: 18  VTGSSDNEYFYVDFREYEYDLKWE-------FPRENLE-----FGKVLGSGAFGKVMNAT 65

Query: 213 L-----STSGLPIAVK--KISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQEL 264
                 +   + +AVK  K   DS +  +  +SE+  M  L  H N+V L G C     +
Sbjct: 66  AYGISKTGVSIQVAVKMLKEKADSSE-REALMSELKMMTQLGSHENIVNLLGACTLSGPI 124

Query: 265 LLVYNYMHN 273
            L++ Y   
Sbjct: 125 YLIFEYCCY 133

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 61.1 bits (149), Expect = 5e-11
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 17/112 (15%)

Query: 169 EELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVL-----STSGLPIAVK 223
            +L  D + E+   R S          F + +G G FGKV +        S + + +AVK
Sbjct: 10  TQLPYDHKWEFPRNRLS----------FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK 59

Query: 224 KISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN 273
            +         +  +SE+  +  L  H N+V L G C      L++  Y   
Sbjct: 60  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 111

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 196 FKELIGKGGFGKVYKGVL-------STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL- 246
             + +G+G FG+V                + +AVK +  D +E+ + + VSE+  M  + 
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144

Query: 247 RHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +H+N++ L G C +   L ++  Y   
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASK 171

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 196 FKELIGKGGFGKVYKGVL-------STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL- 246
             + +G+G FG+V                  +AVK +  D +E+ + + +SE+  M  + 
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132

Query: 247 RHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +H+N++ L G C +   L ++  Y   
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASK 159

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 60.8 bits (148), Expect = 6e-11
 Identities = 18/74 (24%), Positives = 37/74 (50%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           E IG+G  G VY  +   +G  +A+++++   +   +  ++EI+ M   ++ N+V     
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 258 CRRKQELLLVYNYM 271
                EL +V  Y+
Sbjct: 86  YLVGDELWVVMEYL 99

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 19/74 (25%), Positives = 36/74 (48%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
             IG+G  G V       SG  +AVK +    +Q  +   +E+V M   +H N+V+++  
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110

Query: 258 CRRKQELLLVYNYM 271
               +EL ++  ++
Sbjct: 111 YLVGEELWVLMEFL 124

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 60.4 bits (147), Expect = 9e-11
 Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 21/132 (15%)

Query: 161 YIVQKKKYEELYEDWESEYGPQR--FSYKDLYKATK--------GFKELIGKGGFGKVYK 210
              QK KY+  ++  ES  G          L    K         F + +G G FGKV +
Sbjct: 5   KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64

Query: 211 GVL-----STSGLPIAVKKI---SHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRK 261
                     + L +AVK +   +H  E   +  +SE+  M  L +H N+V L G C   
Sbjct: 65  ATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHG 122

Query: 262 QELLLVYNYMHN 273
             +L++  Y   
Sbjct: 123 GPVLVITEYCCY 134

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL 246
              Y  T    E++G G FG+V+K   + +GL +A K I     +  +E  +EI  M  L
Sbjct: 86  NSFY--TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143

Query: 247 RHRNLVQLHGYCRRKQELLLVYNYM 271
            H NL+QL+     K +++LV  Y+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYV 168

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKI-SHDSEQWMKEFVSEIVSMGAL-RH 248
             + +G+G FG+V +        + +   +AVK +    +    +  +SE+  +  +  H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90

Query: 249 RNLVQLHGYC-RRKQELLLVYNYMHN 273
            N+V L G C +    L+++  +   
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKF 116

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW---MKEFVSEIVSMGALRHRNLVQL 254
             IG G FG VY      +   +A+KK+S+  +Q     ++ + E+  +  LRH N +Q 
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119

Query: 255 HGYCRRKQELLLVYNYM 271
            G   R+    LV  Y 
Sbjct: 120 RGCYLREHTAWLVMEYC 136

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 186 YKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA 245
           Y   ++       ++G+G FG+V K   +      A+KKI H  E+ +   +SE++ + +
Sbjct: 4   YASDFE----EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLAS 58

Query: 246 LRHRNLVQLHG 256
           L H+ +V+ + 
Sbjct: 59  LNHQYVVRYYA 69

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 57.3 bits (139), Expect = 8e-10
 Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNL--VQ 253
           + IG GG  KV++ +     +  A+K ++ +    Q +  + +EI  +  L+  +   ++
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92

Query: 254 LHGYCRRKQELLLV 267
           L+ Y    Q + +V
Sbjct: 93  LYDYEITDQYIYMV 106

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 57.4 bits (139), Expect = 9e-10
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           E +G+G +G VYK +   +G  +A+K++    E  ++E + EI  M      ++V+ +G 
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVKYYGS 92

Query: 258 CRRKQELLLVYNYM 271
             +  +L +V  Y 
Sbjct: 93  YFKNTDLWIVMEYC 106

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 57.5 bits (139), Expect = 9e-10
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNL--VQ 253
           + IG GG  KV++ VL+      A+K ++ +    Q +  + +EI  +  L+  +   ++
Sbjct: 62  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120

Query: 254 LHGYCRRKQELLLV 267
           L+ Y    Q + +V
Sbjct: 121 LYDYEITDQYIYMV 134

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNL--VQ 253
           + IG GG  KV++ +     +  A+K ++ +    Q +  + +EI  +  L+  +   ++
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73

Query: 254 LHGYCRRKQELLLV 267
           L+ Y    Q + +V
Sbjct: 74  LYDYEITDQYIYMV 87

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 13/79 (16%)

Query: 182 QRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDSEQWMKEF 236
            + +   L+       +++G+G    V++G    +G   A+K           +  M+EF
Sbjct: 3   SQSTSNHLWL----LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF 58

Query: 237 VSEIVSMGALRHRNLVQLH 255
             E+  +  L H+N+V+L 
Sbjct: 59  --EV--LKKLNHKNIVKLF 73

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 13/79 (16%)

Query: 182 QRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDSEQWMKEF 236
            + +   L+       +++G+G    V++G    +G   A+K           +  M+EF
Sbjct: 3   SQSTSNHLWL----LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF 58

Query: 237 VSEIVSMGALRHRNLVQLH 255
             E+  +  L H+N+V+L 
Sbjct: 59  --EV--LKKLNHKNIVKLF 73

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 51.8 bits (124), Expect = 1e-09
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 56 LSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFS 93
          LS  + L  ++ + + +GFSA+TG   +   +L WSF 
Sbjct: 6  LSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFH 43

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV-SEIVSMGA 245
            + Y       E +G+G FG V++ V ++S      K +        +  V  EI  +  
Sbjct: 4   YEKYM----IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--QVLVKKEISILNI 57

Query: 246 LRHRNLVQLHGYCRRKQELLLVYNYM 271
            RHRN++ LH      +EL++++ ++
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFI 83

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHG 256
           E IGKG FG+V+KG+ + +   +A+K I  +  +  +++   EI  +       + + +G
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87

Query: 257 YCRRKQELLLVYNYM 271
              +  +L ++  Y+
Sbjct: 88  SYLKDTKLWIIMEYL 102

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           E+IG G    V     +     +A+K+I+ +  +  M E + EI +M    H N+V  + 
Sbjct: 21  EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80

Query: 257 YCRRKQELLLVYNYM 271
               K EL LV   +
Sbjct: 81  SFVVKDELWLVMKLL 95

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
            L+G+G +G V K     +G  +A+KK     +    + V      EI  +  LRH NLV
Sbjct: 31  GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD---DKMVKKIAMREIKLLKQLRHENLV 87

Query: 253 QLHGYCRRKQELLLVYNYMH 272
            L   C++K+   LV+ ++ 
Sbjct: 88  NLLEVCKKKKRWYLVFEFVD 107

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS------HDSEQWMKEFVSEI 240
           +D Y       E +G G F  V K    ++GL  A K I              +E   E+
Sbjct: 11  EDFYD----IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLV 267
             +  + H N++ LH     + +++L+
Sbjct: 67  SILRQVLHPNIITLHDVYENRTDVVLI 93

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 55.5 bits (133), Expect = 6e-09
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV-SEIVSMGALRHRNLVQL 254
            KE +G GGFG V + +   +G  +A+K+   +     +E    EI  M  L H N+V  
Sbjct: 18  MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77

Query: 255 H 255
            
Sbjct: 78  R 78

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 54.5 bits (132), Expect = 6e-09
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI------SHDSEQWMKEFVSEI 240
           +D Y+      E +G G F  V K     +G   A K I      S       +E   E+
Sbjct: 4   EDHYE----MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 59

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLV 267
             +  +RH N++ LH     K +++L+
Sbjct: 60  NILREIRHPNIITLHDIFENKTDVVLI 86

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 54.5 bits (132), Expect = 7e-09
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
             IG+G +G V+K     +G  +A+KK     +      +      EI  +  L+H NLV
Sbjct: 9   GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED---DPVIKKIALREIRMLKQLKHPNLV 65

Query: 253 QLHGYCRRKQELLLVYNYM 271
            L    RRK+ L LV+ Y 
Sbjct: 66  NLLEVFRRKRRLHLVFEYC 84

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI------SHDSEQWMKEFVSEI 240
            D Y       E +G G F  V K    ++GL  A K I      S       ++   E+
Sbjct: 10  DDYYD----TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLV 267
             +  ++H N++ LH     K +++L+
Sbjct: 66  SILKEIQHPNVITLHEVYENKTDVILI 92

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 54.1 bits (131), Expect = 9e-09
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKE-FVSEIVSMGALRHRNLVQL 254
             +GKGGF K ++   + +    A K +      +   +E    EI    +L H+++V  
Sbjct: 21  RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80

Query: 255 HGY 257
           HG+
Sbjct: 81  HGF 83

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQL 254
             +GKGGF K ++   + +    A K +           ++   EI    +L H+++V  
Sbjct: 47  RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106

Query: 255 HGY 257
           HG+
Sbjct: 107 HGF 109

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDSEQWMKEFV-SEI 240
           +D Y       E +G G F  V K    ++GL  A K     +         +E +  E+
Sbjct: 11  EDFYD----IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
             +  + H N++ LH     + +++L+   +
Sbjct: 67  SILRQVLHHNVITLHDVYENRTDVVLILELV 97

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 54.3 bits (130), Expect = 1e-08
 Identities = 10/87 (11%), Positives = 21/87 (24%), Gaps = 11/87 (12%)

Query: 176 ESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI---SHDSEQW 232
           +S         K          E +  G    V+           A+K     + +S   
Sbjct: 54  DSLLSQGERKLK--------LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSE 105

Query: 233 MKEFVSEIVSMGALRHRNLVQLHGYCR 259
           ++       +   L   +  +     R
Sbjct: 106 LERLHEATFAAARLLGESPEEARDRRR 132

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           ELIG GGFG+V+K      G    +K++ +++E+  +    E+ ++  L H N+V  +G 
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNGC 72

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           F + +G+GGF  V        G   A+K+I    +Q  +E   E        H N+++L 
Sbjct: 33  FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92

Query: 256 GYCRR----KQELLLV 267
            YC R    K E  L+
Sbjct: 93  AYCLRERGAKHEAWLL 108

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV-SEIVSMGA 245
            DL+     FK  +G G FG V+     +SGL   +K I+ D  Q   E + +EI  + +
Sbjct: 21  DDLFI----FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76

Query: 246 LRHRNLVQLHGYCRRKQELLLV 267
           L H N++++         + +V
Sbjct: 77  LDHPNIIKIFEVFEDYHNMYIV 98

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL 246
           +  +     F E++G G F +V+      +G   A+K I            +EI  +  +
Sbjct: 8   RKTFI----FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI 63

Query: 247 RHRNLVQLHGYCRRKQELLLV 267
           +H N+V L           LV
Sbjct: 64  KHENIVTLEDIYESTTHYYLV 84

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 198 ELIGKG--GFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQ 253
            +IGKG      V       +G  + V++I+    S + +     E+       H N+V 
Sbjct: 31  TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP 90

Query: 254 LHGYCRRKQELLLVYNYM 271
                    EL +V ++M
Sbjct: 91  YRATFIADNELWVVTSFM 108

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE-FVSEIVSMGALRHRNLVQLHG 256
           + +G+GGFG V++          A+K+I   + +  +E  + E+ ++  L H  +V+   
Sbjct: 11  QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70

Query: 257 Y 257
            
Sbjct: 71  A 71

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHG 256
           EL+G G +G+VYKG    +G   A+K +    ++  +E   EI  +     HRN+   +G
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYG 88

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDSEQWMKEFVSEIV 241
           +  Y      K  IG+G +G V   + + +    A+K     KI   + + ++   +E+ 
Sbjct: 25  QKKYH----LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80

Query: 242 SMGALRHRNLVQLHGYCRRKQELLLVYNYMH 272
            M  L H N+ +L+     +Q + LV    H
Sbjct: 81  LMKKLHHPNIARLYEVYEDEQYICLVMELCH 111

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI---SHDSEQWMKEFVSEIVSMGALRHRNLVQL 254
           + IG+G F +VY+      G+P+A+KK+        +   + + EI  +  L H N+++ 
Sbjct: 38  KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97

Query: 255 HGYCRRKQELLLVYNY 270
           +       EL +V   
Sbjct: 98  YASFIEDNELNIVLEL 113

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS---HDSEQWMKEFVSEIV 241
            + D YK     + ++GKG FG+V       +G   AVK IS      +   +  + E+ 
Sbjct: 23  IFSDRYK----GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78

Query: 242 SMGALRHRNLVQLHGYCRRKQELLLV 267
            +  L H N+++L+ +   K    LV
Sbjct: 79  LLKQLDHPNIMKLYEFFEDKGYFYLV 104

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 52.6 bits (126), Expect = 4e-08
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKI-SHDSEQWMKEFVSEIVSMGAL-RH 248
             + +G+G FG+V +        + +   +AVK +    +    +  +SE+  +  +  H
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85

Query: 249 RNLVQLHGYC-RRKQELLLVYNYMHN 273
            N+V L G C +    L+++  +   
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKF 111

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 199 LIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLH 255
           L+GKG F  VY+     +GL +A+K I          ++   +E+     L+H ++++L+
Sbjct: 18  LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77

Query: 256 GY 257
            Y
Sbjct: 78  NY 79

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 165 KKKYEELYEDWESEYGPQRF------SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGL 218
               E LY   + +  P  F         ++Y+      + +G G +G+V       + +
Sbjct: 8   SSGRENLYFQGDLQATPGMFITSKKGHLSEMYQ----RVKKLGSGAYGEVLLCRDKVTHV 63

Query: 219 PIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLV 267
             A+K I  +  S     + + E+  +  L H N+++L+ +   K+   LV
Sbjct: 64  ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 51.8 bits (125), Expect = 5e-08
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMG 244
            D Y      KE +GKG F  V + V  T+GL  A K I     S +  ++   E     
Sbjct: 5   SDNYD----VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60

Query: 245 ALRHRNLVQLHGYCRRKQELLLV 267
            L+H N+V+LH   + +    LV
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLV 83

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 51.8 bits (125), Expect = 5e-08
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL 246
              Y      +  IG+G +G+V   V   + +  A KKI     + +  F  EI  M +L
Sbjct: 8   NQYYT----LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL 63

Query: 247 RHRNLVQLHGYCRRKQELLLV 267
            H N+++L+       ++ LV
Sbjct: 64  DHPNIIRLYETFEDNTDIYLV 84

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS----HDSEQWMKEFV-SEIV 241
           +D+Y+      E+IGKG F  V + +   +G   AVK +       S     E +  E  
Sbjct: 23  EDVYE----LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78

Query: 242 SMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
               L+H ++V+L         L +V+ +M
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFM 108

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 20/105 (19%)

Query: 174 DWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWM 233
             +    PQ  SY D         ++IG G FG VY+  L  SG  +A+KK+  D     
Sbjct: 44  PGQGPDRPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----- 90

Query: 234 KEFVS-EIVSMGALRHRNLVQLHGYCRRKQE------LLLVYNYM 271
           K F + E+  M  L H N+V+L  +     E      L LV +Y+
Sbjct: 91  KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLH 255
           + IG+G FGK      +  G    +K+I+    S +  +E   E+  +  ++H N+VQ  
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89

Query: 256 GYCRRKQELLLVYNY 270
                   L +V +Y
Sbjct: 90  ESFEENGSLYIVMDY 104

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
             +G+G +G+VYK + + +   +A+K+I  + E   +E V      E+  +  L+HRN++
Sbjct: 40  TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE---EEGVPGTAIREVSLLKELQHRNII 96

Query: 253 QLHGYCRRKQELLLVYNYMH 272
           +L         L L++ Y  
Sbjct: 97  ELKSVIHHNHRLHLIFEYAE 116

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 51.8 bits (125), Expect = 7e-08
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           E IG+G +G VYK     +G  +A+KKI  D+E    E V      EI  +  L H N+V
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TEGVPSTAIREISLLKELNHPNIV 65

Query: 253 QLHGYCRRKQELLLVYNYMH 272
           +L      + +L LV+ ++H
Sbjct: 66  KLLDVIHTENKLYLVFEFLH 85

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 51.4 bits (124), Expect = 7e-08
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           E IG+G +G V+K     +   +A+K++  D +    E V      EI  +  L+H+N+V
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIV 64

Query: 253 QLHGYCRRKQELLLVYNYMH 272
           +LH      ++L LV+ +  
Sbjct: 65  RLHDVLHSDKKLTLVFEFCD 84

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 51.6 bits (124), Expect = 7e-08
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEI-VSMGALRHRNLVQLH 255
             IG+G +G V K V   SG  +AVK+I     E+  K+ + ++ V M +     +VQ +
Sbjct: 28  GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87

Query: 256 GYCRRKQELLLVYNYM 271
           G   R+ +  +    M
Sbjct: 88  GALFREGDCWICMELM 103

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMG 244
            + Y        ++GKG FG+V K     +    AVK I  +    +     + E+  + 
Sbjct: 21  AERYN----IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 245 ALRHRNLVQLHGYCRRKQELLLV 267
            L H N+++L           +V
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIV 99

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMG 244
            + Y        ++GKG FG+V K     +    AVK I+      +     + E+  + 
Sbjct: 21  AERYN----IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 245 ALRHRNLVQLHGYCRRKQELLLV 267
            L H N+++L           +V
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIV 99

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 12/116 (10%), Positives = 31/116 (26%), Gaps = 15/116 (12%)

Query: 161 YIVQKKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGV-----LST 215
               + K   +    E + G +                L+G+G F +VY+        + 
Sbjct: 44  TFEWQCKLPAIKPKTEFQLGSKLVY----------VHHLLGEGAFAQVYEATQGDLNDAK 93

Query: 216 SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
           +     +K     +          +  +        ++ +     +   +LV    
Sbjct: 94  NKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELY 149

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEI-VSMGALRHRNLVQLH 255
             +G+G +G V K     SG  +AVK+I      Q  K  + ++ +SM  +     V  +
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72

Query: 256 GYCRRKQELLLVYNYM 271
           G   R+ ++ +    M
Sbjct: 73  GALFREGDVWICMELM 88

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           + +G+G F  VYK     +   +A+KKI        K+ ++     EI  +  L H N++
Sbjct: 16  DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75

Query: 253 QLHGYCRRKQELLLVYNYMH 272
            L      K  + LV+++M 
Sbjct: 76  GLLDAFGHKSNISLVFDFME 95

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMG 244
            D Y      KE +GKG F  V + V  T+GL  A K I     S +  ++   E     
Sbjct: 28  SDNYD----VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 83

Query: 245 ALRHRNLVQLHGYCRRKQELLLVYNYM 271
            L+H N+V+LH   + +    LV++ +
Sbjct: 84  KLQHPNIVRLHDSIQEESFHYLVFDLV 110

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 180 GPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDSEQWMK 234
           G ++   +  Y+       L+G GGFG VY G+  +  LP+A+K     +IS   E    
Sbjct: 35  GKEKEPLESQYQ----VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 90

Query: 235 EFVS-EIVSMGALRHR--NLVQLHGYCRRKQELLLVYNY 270
             V  E+V +  +      +++L  +  R    +L+   
Sbjct: 91  TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 129

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 180 GPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSE 239
           G  R +  D ++     +  +G+G    VY+     +  P A+K +    ++  K   +E
Sbjct: 45  GSNRDALSDFFE----VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTE 98

Query: 240 IVSMGALRHRNLVQLHGYCRRKQELLLV 267
           I  +  L H N+++L        E+ LV
Sbjct: 99  IGVLLRLSHPNIIKLKEIFETPTEISLV 126

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMG 244
            + Y+      E +GKG F  V + V   +G   A   I     S +  ++   E     
Sbjct: 10  TEEYQ----LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 245 ALRHRNLVQLHGYCRRKQELLLV 267
            L+H N+V+LH     +    L+
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLI 88

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMG 244
            + Y  T    + +G+G F  V + +  ++G   A K +      +    E + EI  + 
Sbjct: 27  NNFYILTS---KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLE 83

Query: 245 ALRHR-NLVQLHGYCRRKQELLLVYNYM 271
             +    ++ LH       E++L+  Y 
Sbjct: 84  LAKSCPRVINLHEVYENTSEIILILEYA 111

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 49.8 bits (120), Expect = 3e-07
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           E IG+G +G VYK   +  G   A+KKI  + E    E +      EI  +  L+H N+V
Sbjct: 8   EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIV 63

Query: 253 QLHGYCRRKQELLLVYNYMH 272
           +L+     K+ L+LV+ ++ 
Sbjct: 64  KLYDVIHTKKRLVLVFEHLD 83

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLH 255
           + ++ +GGF  VY+     SG   A+K++  + E+  +  + E+  M  L  H N+VQ  
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92

Query: 256 GYCRRKQE 263
                 +E
Sbjct: 93  SAASIGKE 100

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMG 244
            ++D+Y+  +   +++G+G   +V   +   +    AVK I             E+  + 
Sbjct: 9   RFEDVYQLQE---DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLY 65

Query: 245 ALR-HRNLVQLHGYCRRKQELLLVYNYM 271
             + HRN+++L  +   +    LV+  M
Sbjct: 66  QCQGHRNVLELIEFFEEEDRFYLVFEKM 93

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 21/98 (21%)

Query: 181 PQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-E 239
            +  +Y +         ++IG G FG V++  L  S   +A+KK+  D     K F + E
Sbjct: 37  QREIAYTNC--------KVIGNGSFGVVFQAKLVESD-EVAIKKVLQD-----KRFKNRE 82

Query: 240 IVSMGALRHRNLVQLH------GYCRRKQELLLVYNYM 271
           +  M  ++H N+V L       G  + +  L LV  Y+
Sbjct: 83  LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 17/94 (18%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS-------------HDSEQWM 233
            + Y         +G G +G+V            A+K I               + E++ 
Sbjct: 35  GESYF----KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90

Query: 234 KEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLV 267
           +E  +EI  + +L H N+++L      K+   LV
Sbjct: 91  EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLV 124

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 9/80 (11%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           E +G+G +G VYK    + G  +A+K+I  D+E    E +      EI  +  L H N+V
Sbjct: 27  EKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAE---DEGIPSTAIREISLLKELHHPNIV 82

Query: 253 QLHGYCRRKQELLLVYNYMH 272
            L      ++ L LV+ +M 
Sbjct: 83  SLIDVIHSERCLTLVFEFME 102

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 15/107 (14%), Positives = 36/107 (33%), Gaps = 13/107 (12%)

Query: 160 IYIVQKKKYEELYEDWESEYGPQRF-SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGL 218
           I +   +    ++ D   +       + +D Y       + +G G  G+V       +  
Sbjct: 106 IALSLSRNKVFVFFDLTVDDQSVYPKALRDEYI----MSKTLGSGACGEVKLAFERKTCK 161

Query: 219 PIAVKKIS--------HDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
            +A++ IS                   +EI  +  L H  ++++  +
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 49.1 bits (117), Expect = 5e-07
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISH-DSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
           + +G+GGFG V++          A+K+I   + E   ++ + E+ ++  L H  +V+   
Sbjct: 12  QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 48.7 bits (117), Expect = 6e-07
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 199 LIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFV-SEIVSMGALRHRNLVQLH 255
            +GKG FG VY      S   +A+K +  +   +  ++  +  E+     LRH N+++L+
Sbjct: 16  PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75

Query: 256 GYCRRKQELLLVYNYMHN 273
           GY      + L+  Y   
Sbjct: 76  GYFHDATRVYLILEYAPL 93

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEI-VSMGALRHRNLVQLH 255
             +G G  G+V+K     +G  IAVK++     ++  K  + ++ V + +     +VQ  
Sbjct: 31  GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90

Query: 256 GYCRRKQELLLVYNYM 271
           G      ++ +    M
Sbjct: 91  GTFITNTDVFIAMELM 106

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-EIVSMGALRHRNLVQLHG 256
           + +G+G +G+V   V   +   +AVK +         E +  EI     L H N+V+ +G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 257 YCRRKQELLLVYNY 270
           + R      L   Y
Sbjct: 73  HRREGNIQYLFLEY 86

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           E +G G +  VYKG+  T+G+ +A+K++  DSE    E        EI  M  L+H N+V
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE----EGTPSTAIREISLMKELKHENIV 66

Query: 253 QLHGYCRRKQELLLVYNYMH 272
           +L+     + +L LV+ +M 
Sbjct: 67  RLYDVIHTENKLTLVFEFMD 86

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLV 252
           + +G+G +  VYKG    +   +A+K+I  + E    E        E+  +  L+H N+V
Sbjct: 8   DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIV 63

Query: 253 QLHGYCRRKQELLLVYNYMH 272
            LH     ++ L LV+ Y+ 
Sbjct: 64  TLHDIIHTEKSLTLVFEYLD 83

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTL 43
           +  S  LQ+G    + I +N    +L V+L
Sbjct: 148 NTKSWKLQNGEEANVVIAFNAATNVLTVSL 177

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMG 244
            +   Y      K L G+G F    K V   S    AVK IS   E   ++   EI ++ 
Sbjct: 5   PFYQHYDLDLKDKPL-GEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALK 60

Query: 245 ALR-HRNLVQLHGYCRRKQELLLVYNYM 271
               H N+V+LH     +    LV   +
Sbjct: 61  LCEGHPNIVKLHEVFHDQLHTFLVMELL 88

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 13/90 (14%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS--------HDSEQWMKEFVS 238
              Y      K++IG+G    V + V   +G   AVK +            E+  +    
Sbjct: 93  YQKYD----PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148

Query: 239 EIVSMGALR-HRNLVQLHGYCRRKQELLLV 267
           E   +  +  H +++ L         + LV
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLV 178

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 177 SEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEF 236
            +       + D Y+     KE IG G +    + +   + +  AVK I        +E 
Sbjct: 11  QQLHRNSIQFTDGYE----VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE- 65

Query: 237 VSEIVSMGALRHRNLVQLHGYCRRKQELLLV 267
             EI+     +H N++ L       + + +V
Sbjct: 66  -IEILLR-YGQHPNIITLKDVYDDGKYVYVV 94

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGAL-RHRNLVQL 254
           E IG G FG V+K V    G   A+K+           +  + E+ +   L +H ++V+ 
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76

Query: 255 HG 256
             
Sbjct: 77  FS 78

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 3/73 (4%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQL 254
             +G G +G+V+K      G   AVK+        +     ++E+ S   + +H   V+L
Sbjct: 63  SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122

Query: 255 HGYCRRKQELLLV 267
                    L L 
Sbjct: 123 EQAWEEGGILYLQ 135

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-EIVSMGALRHRNLVQLHG 256
           + +G+G +G+V   V   +   +AVK +         E +  EI     L H N+V+ +G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 257 YCRRKQELLLVYNY 270
           + R      L   Y
Sbjct: 73  HRREGNIQYLFLEY 86

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLH 255
             IG G +G+  K    + G  +  K++ +   +E   +  VSE+  +  L+H N+V+ +
Sbjct: 12  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71

Query: 256 G--YCRRKQELLLVYNY 270
                R    L +V  Y
Sbjct: 72  DRIIDRTNTTLYIVMEY 88

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-EIVSMGALRHRNLVQLH 255
           + IG G FG         +   +AVK I  +    + E V  EI++  +LRH N+V+  
Sbjct: 26  KDIGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFK 82

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS-------HDSEQWMKEFV 237
           + +D Y       + +G G  G+V       +   +A+K IS          E      V
Sbjct: 7   ALRDEYI----MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV 62

Query: 238 -SEIVSMGALRHRNLVQLHGY 257
            +EI  +  L H  ++++  +
Sbjct: 63  ETEIEILKKLNHPCIIKIKNF 83

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 199 LIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFV-SEIVSMGALRHRNLVQLH 255
            +GKG FG VY      +   +A+K +  S   ++ ++  +  EI     LRH N+++++
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 256 GYCRRKQELLLVYNY 270
            Y   ++ + L+  +
Sbjct: 81  NYFHDRKRIYLMLEF 95

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 10/80 (12%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDSEQWMKEFV-SEIVSMGALR---- 247
            L+GKGGFG V+ G   T  L +A+K     ++   S          E+  +  +     
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96

Query: 248 HRNLVQLHGYCRRKQELLLV 267
           H  +++L  +   ++  +LV
Sbjct: 97  HPGVIRLLDWFETQEGFMLV 116

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
            + G+G FG V  G   ++G+ +A+KK+  D     +E +  +  +  L H N+VQL  Y
Sbjct: 29  RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSY 87

Query: 258 CRRKQE-------LLLVYNYM 271
                E       L +V  Y+
Sbjct: 88  FYTLGERDRRDIYLNVVMEYV 108

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 181 PQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEI 240
           P++++  D Y+ +K   +++G G  GKV +     +G   A+K +  DS +  +E   + 
Sbjct: 21  PKKYAVTDDYQLSK---QVLGLGVNGKVLECFHRRTGQKCALKLLY-DSPKARQEV--DH 74

Query: 241 VSMGALRHRNLVQLHGYC----RRKQELLLVYNYM 271
               A    ++V +          K+ LL++   M
Sbjct: 75  HWQ-ASGGPHIVCILDVYENMHHGKRCLLIIMECM 108

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHG 256
             +G G  G V+K     SGL +A K I  +       + + E+  +       +V  +G
Sbjct: 39  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98

Query: 257 YCRRKQELLLVYNYM 271
                 E+ +   +M
Sbjct: 99  AFYSDGEISICMEHM 113

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS----EIVSMGALRHRNLVQ 253
           +L+G+G +GKV + + S +    AVK +     + +    +    EI  +  LRH+N++Q
Sbjct: 11  DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70

Query: 254 LH 255
           L 
Sbjct: 71  LV 72

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           IGKG F KV       +G  +A+K I     +   +++   E+  M  L H N+V+L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82

Query: 258 CRRKQELLLVYNY 270
              ++ L L+  Y
Sbjct: 83  IETEKTLYLIMEY 95

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKIS---------HDSEQWMKEFV 237
            + Y+     KE++G+G    V + +   +    AVK I           + ++  +  +
Sbjct: 16  YENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71

Query: 238 SEIVSMGAL-RHRNLVQLHGYCRRKQELLLV 267
            E+  +  +  H N++QL           LV
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVS-EIVSMGALRHRNLVQL 254
           + +G G FGKV  G    +G  +AVK ++        +   +  EI ++   RH ++++L
Sbjct: 17  DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

Query: 255 H 255
           +
Sbjct: 77  Y 77

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVS-EIVSMGALRHRNLVQL 254
           E +G+G FGKV       +   +A+K IS     +  M   V  EI  +  LRH ++++L
Sbjct: 15  ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74

Query: 255 HGYCRRKQELLLVYNY 270
           +       ++++V  Y
Sbjct: 75  YDVITTPTDIVMVIEY 90

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVS-EIVSMGALRHRNLVQL 254
           + +G G FGKV  G    +G  +AVK ++        +   +  EI ++   RH ++++L
Sbjct: 22  DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

Query: 255 HGYCRRKQELLLVYNY 270
           +       ++ +V  Y
Sbjct: 82  YQVISTPSDIFMVMEY 97

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 16/85 (18%)

Query: 200 IGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALRHRNLVQL 254
           IG+G FG+V+K     +G  +A+KK+  ++E   KE        EI  +  L+H N+V L
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKHENVVNL 81

Query: 255 HG--------YCRRKQELLLVYNYM 271
                     Y R K  + LV+++ 
Sbjct: 82  IEICRTKASPYNRCKGSIYLVFDFC 106

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVK-----KISHDS---EQWMKEFVSEIVSMGALRHR 249
             +G G FG V+  V       + VK     K+  D    +  + +   EI  +  + H 
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89

Query: 250 NLVQLHGYCRRKQELLLV 267
           N++++      +    LV
Sbjct: 90  NIIKVLDIFENQGFFQLV 107

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             +++G G  GKV +     +    A+K +  D  +  +E   E+    A +  ++V++ 
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARRE--VELHWR-ASQCPHIVRIV 77

Query: 256 GYC----RRKQELLLV 267
                    ++ LL+V
Sbjct: 78  DVYENLYAGRKCLLIV 93

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 12/101 (11%)

Query: 176 ESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQW 232
           ESE G +  +             ++G+       +     +G    V             
Sbjct: 65  ESELGERPRTLV--------RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNA 116

Query: 233 MKEFVSEIVSMGALRH-RNLVQLHGYCRRKQELLLVYNYMH 272
           +K+   E++ +  LR  +N  Q   + R      LV +   
Sbjct: 117 IKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 9/84 (10%)

Query: 185 SYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMG 244
           S K+L       ++++G G  G V        G P+AVK++  D        + EI  + 
Sbjct: 12  SLKNLVV----SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF---CDIALMEIKLLT 63

Query: 245 AL-RHRNLVQLHGYCRRKQELLLV 267
               H N+++ +      + L + 
Sbjct: 64  ESDDHPNVIRYYCSETTDRFLYIA 87

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-EIVSMGALRHRNLVQL 254
           + +G G FG V +     SG   A+KK+  D       + + E+  M  L H N+++L
Sbjct: 13  KTLGTGSFGIVCEVFDIESGKRFALKKVLQD-----PRYKNRELDIMKVLDHVNIIKL 65

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS----EIVSMGAL-RHRN 250
            K+++G G  G +    +      +AVK+I         E  S    E+  +     H N
Sbjct: 28  PKDVLGHGAEGTIVYRGMFD-NRDVAVKRIL-------PECFSFADREVQLLRESDEHPN 79

Query: 251 LVQLHGYCRRKQELLLV 267
           +++     + +Q   + 
Sbjct: 80  VIRYFCTEKDRQFQYIA 96

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 169 EELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGV--LSTSGLPIAVKKIS 226
           +++  D++ +   +R   +DL++  +G K  +G+G +G VYK            A+K+I 
Sbjct: 1   DKMDYDFKVKLSSERERVEDLFE-YEGCK--VGRGTYGHVYKAKRKDGKDDKDYALKQIE 57

Query: 227 HDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE--LLLVYNYM 271
                       EI  +  L+H N++ L        +  + L+++Y 
Sbjct: 58  GTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 102

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 42.9 bits (100), Expect = 6e-05
 Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 28/121 (23%)

Query: 177 SEYGPQRFSYKDLYKATKGFKEL--IGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---- 230
           S+ GP  FS+      T+  +    IG+G FG+V++ +      P+A+K I+ +      
Sbjct: 6   SQKGPVPFSH---CLPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVN 60

Query: 231 ----QWMKEFVSEIVSMGAL---------RHRNLVQLHGYC----RRKQELLLVYNYMHN 273
               +  +E + EI+    L         R    + L+            LL  +++ ++
Sbjct: 61  GSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNS 120

Query: 274 K 274
            
Sbjct: 121 T 121

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             +++G G  GKV +     +    A+K +  D  +  +E   E+    A +  ++V++ 
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARRE--VELHWR-ASQCPHIVRIV 121

Query: 256 GYC----RRKQELLLVYNYM 271
                    ++ LL+V   +
Sbjct: 122 DVYENLYAGRKCLLIVMECL 141

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           + +G GG G V+  V +     +A+KKI     Q +K  + EI  +  L H N+V++ 
Sbjct: 17  KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVF 74

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVS-----EIVSMGALR---HR 249
             IG G +G VYK     SG  +A+K +   +       +      E+  +  L    H 
Sbjct: 15  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74

Query: 250 NLVQLH-----GYCRRKQELLLVYNYMH 272
           N+V+L          R+ ++ LV+ ++ 
Sbjct: 75  NVVRLMDVCATSRTDREIKVTLVFEHVD 102

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 198 ELIGKGGFGKVYKGV-LSTSGLPIAVKKISHDSEQWMKE-FVSEIVSMGALRHRNLVQLH 255
             I  GG G +Y  +  + +G P+ +K + H  +   +   ++E   +  + H ++VQ+ 
Sbjct: 86  GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145

Query: 256 GY 257
            +
Sbjct: 146 NF 147

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRH-RNLVQ 253
            ++G+       +     +G    V             +K+   E++ +  LR  +N  Q
Sbjct: 84  TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 143

Query: 254 LHGYCRRKQELLLVYNYMH 272
              + R      LV +   
Sbjct: 144 AKVHLRFIFPFDLVKDPQK 162

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWM--KEFVSEIVSMGALRHRNLVQL 254
           + LIG G +G V +         +A+KKI    E  +  K  + EI  +  L H ++V++
Sbjct: 58  RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117

Query: 255 H-----GYCRRKQELLLVYNYM 271
                     +  EL +V    
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIA 139

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 15/89 (16%)

Query: 200 IGKGGFGKVY---------------KGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMG 244
           + +G F K+                K +L                +    +F +E+  + 
Sbjct: 39  LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98

Query: 245 ALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            +++   +   G      E+ ++Y YM N
Sbjct: 99  DIKNEYCLTCEGIITNYDEVYIIYEYMEN 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	274
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	99.9
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.85
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	99.85
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	99.84
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	99.84
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	99.84
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	99.83
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	99.83
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	99.83
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	99.83
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	99.83
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	99.83
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	99.83
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	99.83
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	99.82
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	99.82
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	99.82
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	99.82
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	99.82
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	99.81
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	99.81
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	99.81
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	99.8
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	99.8
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	99.8
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.74
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.72
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.72
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.68
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.62
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.61
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.61
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.6
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.6
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.58
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.57
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.56
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.52
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.51
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.51
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.47
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.47
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.46
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.44
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.39
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.39
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.38
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.38
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.36
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	99.35
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.35
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.34
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	99.33
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.33
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.33
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.33
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.32
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.31
3uqc_A	286	Probable conserved transmembrane protein; structur	99.31
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.31
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.3
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.3
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.3
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.3
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.29
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.29
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.29
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.28
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.28
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.28
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.28
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.28
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.27
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.27
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.27
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.27
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.27
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.27
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.27
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.26
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.26
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.26
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.26
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.26
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.25
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.25
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.25
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.25
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.25
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.24
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.24
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.24
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.24
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.24
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.23
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.23
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.23
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.23
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.23
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.22
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.22
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.22
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.22
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.22
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.21
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.21
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.21
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.21
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.21
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.21
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.21
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.21
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.21
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.21
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.21
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.21
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.21
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.21
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.21
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.2
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.2
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.2
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.2
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.19
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.19
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.19
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.19
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.19
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.19
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.19
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.19
3bhy_A	283	Death-associated protein kinase 3; death associate	99.18
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.18
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.18
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.18
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.18
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.18
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.18
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.18
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.18
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.18
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.17
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.17
3niz_A	311	Rhodanese family protein; structural genomics, str	99.17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.17
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.17
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.17
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.16
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.16
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.16
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.16
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.16
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.15
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.15
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.15
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.15
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.14
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.14
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.14
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.14
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.14
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.14
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.14
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.14
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.13
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.13
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.13
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.12
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.12
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.1
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.1
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.1
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.09
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.07
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.07
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.05
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.04
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.03
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.03
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.02
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.02
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.02
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.02
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.01
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.01
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.01
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.99
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.98
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.95
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.94
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.91
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.9
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.89
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.89
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.89
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.88
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.88
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.87
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.86
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.86
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.86
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.85
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.83
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.83
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.83
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.82
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.8
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.79
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.77
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.75
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.74
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.71
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.71
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.71
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.69
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.69
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.68
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	98.62
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.57
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.39
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.15
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.91
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.57
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	97.34
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.15
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.76
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.45
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	94.72
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	94.12
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	93.87
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.29
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.41
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	92.24
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	91.68
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	90.13
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	88.77
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	88.52
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	86.98
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	85.71
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	84.97
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	82.6

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.90  E-value=3.2e-24  Score=163.72  Aligned_cols=79  Identities=32%  Similarity=0.371  Sum_probs=72.7

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      +.+|+|.+|+.|+|||+||+.+++|+|+|++.+. +  .|+|+..+||+++|+|+|||||||+||...+.|+|++|+|++
T Consensus        36 s~~~~l~sG~~~~v~I~Yd~~~~~L~V~l~~~~~-~--~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s  112 (133)
T 1qmo_E           36 TAKWDWQNGKIATAHISYNSVSKRLSVTSYYAGS-K--PATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTS  112 (133)
T ss_dssp             EEECCCCTTSCEEEEEEEETTTTEEEEEEECSSS-C--CEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEE
T ss_pred             eeeeEEcCCCEEEEEEEEeCCCcEEEEEEccCCC-c--cceEEEeechHHhccccEEEEEEeccCCCcceeEEEEEEEEe
Confidence            4567789999999999999999999999998764 2  799999999999999999999999999999999999999987


Q ss_pred             cC
Q 045713           95 IG   96 (274)
Q Consensus        95 ~~   96 (274)
                      ..
T Consensus       113 ~l  114 (133)
T 1qmo_E          113 SL  114 (133)
T ss_dssp             EE
T ss_pred             eC
Confidence            53

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.85  E-value=1.2e-21  Score=164.56  Aligned_cols=80  Identities=29%  Similarity=0.431  Sum_probs=73.4

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      +.+|+|.+|+.|+|||+||+.+++|+|+|++.+.   .+|+|++.+||+++|+|+|||||||+||...+.|+|++|+|++
T Consensus        37 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s  113 (237)
T 1nls_A           37 TAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNA---DSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS  113 (237)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEE
T ss_pred             cccccccCCCEEEEEEEEeCCCCEEEEEEecCCC---CcceEEEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEe
Confidence            4567788999999999999999999999998753   6789999999999999999999999999999999999999998


Q ss_pred             cCC
Q 045713           95 IGE   97 (274)
Q Consensus        95 ~~~   97 (274)
                      ...
T Consensus       114 ~~~  116 (237)
T 1nls_A          114 KLK  116 (237)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            643

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=99.85  E-value=8.2e-22  Score=166.79  Aligned_cols=79  Identities=30%  Similarity=0.492  Sum_probs=73.4

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~Ws   91 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|++.+||+++|+|+|||||||+||..   .+.|+|++|+
T Consensus       155 t~~~~l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~e~h~IlsWs  232 (251)
T 3ipv_A          155 TVKWSLANGEAAKVLITYNSAVKLLVASLVYPSS--KTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWS  232 (251)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cceeEecCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCcEEEEEEEecCCCccccceeEEEEEE
Confidence            4568899999999999999999999999998764  5688999999999999999999999999998   8999999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |++.
T Consensus       233 F~s~  236 (251)
T 3ipv_A          233 FASK  236 (251)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9985

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=99.84  E-value=1.1e-21  Score=167.12  Aligned_cols=88  Identities=31%  Similarity=0.440  Sum_probs=68.6

Q ss_pred             ecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeec-CcccceeEecccccccCCc
Q 045713           20 LQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTG-ILTSNQYILGWSFSRIGEA   98 (274)
Q Consensus        20 l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg-~~~~~~~i~~WsF~s~~~~   98 (274)
                      |.+|+.++|||+||+.+++|+|+|++.+.   ..|+|++.+||+.+|+|+|||||||+|| ...+.|+|++|+|++++..
T Consensus       165 l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~~~vGFSAsTG~~~~~~H~IlsWsF~s~~~~  241 (257)
T 1hql_A          165 IFSGKIATARISYDGSAEILTVVLSYPDG---SDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSNLQS  241 (257)
T ss_dssp             HTSCSCEEEEEEEETTTTEEEEEEEETTT---EEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEEEC--
T ss_pred             ccCCceEEEEEEEeCCCCEEEEEEecCCC---CceeeEEeechHHhcCCceEEEEEeccCCCccceeEEEEEEeEecCCC
Confidence            33499999999999999999999998754   4689999999999999999999999999 8999999999999998877


Q ss_pred             cCCCCCCCCCCC
Q 045713           99 QNLDISKLPILP  110 (274)
Q Consensus        99 ~~~~~~~~p~~~  110 (274)
                      +..+.+.+|..|
T Consensus       242 ~~~~~~~~p~~~  253 (257)
T 1hql_A          242 TSVKAAMEPEIT  253 (257)
T ss_dssp             ------------
T ss_pred             CCcccccCCCCC
Confidence            777766666554

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=99.84  E-value=2.7e-21  Score=165.53  Aligned_cols=81  Identities=28%  Similarity=0.489  Sum_probs=73.5

Q ss_pred             CeeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC---cccceeEecc
Q 045713           14 SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI---LTSNQYILGW   90 (274)
Q Consensus        14 ~~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~---~~~~~~i~~W   90 (274)
                      ++.+|++.+|+.++|||+||+.+++|+|+|++.+.  |.+|+|++.+||+++|+|+|||||||+||.   ..+.|+|++|
T Consensus       173 ~t~~~~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~~~~~~e~H~IlsW  250 (281)
T 3ujo_A          173 KTTSWDFANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLSW  250 (281)
T ss_dssp             CEEECCCCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSEEEEEEEEEECSSTTSCCCCEEEEE
T ss_pred             ccccccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCcEEEEEEeecCCCCcccceeEEEEE
Confidence            35678899999999999999999999999998764  558899999999999999999999999996   5899999999


Q ss_pred             cccccC
Q 045713           91 SFSRIG   96 (274)
Q Consensus        91 sF~s~~   96 (274)
                      +|+++.
T Consensus       251 SFss~l  256 (281)
T 3ujo_A          251 SFASKL  256 (281)
T ss_dssp             EEEEEE
T ss_pred             EEEEEc
Confidence            999853

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=99.84  E-value=2.8e-21  Score=164.13  Aligned_cols=79  Identities=25%  Similarity=0.413  Sum_probs=72.7

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      +.+|++.+|+.++|||+||+.+++|+|+|++.+.   .+|+|++.+||+++|+|+|||||||+||...+.|+|++|+|++
T Consensus       168 s~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~e~h~IlsWsF~s  244 (261)
T 3zyr_A          168 VVRWERREGKTLNVLVTYNPSTRTIDVVATYPDG---QRYQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFTS  244 (261)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEECTTC---CEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEEEE
T ss_pred             cccccccCCceEEEEEEEcCCCCEEEEEEEcCCC---CCeEEEEEechHHhCcCcEEEEEEecCCCccceEEEEEEEEEE
Confidence            4567889999999999999999999999998752   3889999999999999999999999999999999999999998


Q ss_pred             cC
Q 045713           95 IG   96 (274)
Q Consensus        95 ~~   96 (274)
                      ..
T Consensus       245 ~l  246 (261)
T 3zyr_A          245 TL  246 (261)
T ss_dssp             EE
T ss_pred             Ec
Confidence            53

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=99.83  E-value=4.4e-21  Score=161.61  Aligned_cols=81  Identities=28%  Similarity=0.430  Sum_probs=72.9

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCC---CCCCCeeeeecCcccccccceeEeEEeeecCcccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVS---KPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~---~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~Ws   91 (274)
                      ..+|+|.+|+.++|||+||+.+++|+|+|.+.+..   +|..|+|+..+||+.+|||+|||||||+||...+.|+|++|+
T Consensus       149 s~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~p~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWs  228 (234)
T 2bqp_A          149 TKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWS  228 (234)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEEECC------CEEEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEE
T ss_pred             eEeeEEcCCCEEEEEEEEeCCCCEEEEEEecCCCCcccCCCcceEEEEechHHhCCCceEEEEEeccCCCcccEEEEEEE
Confidence            35677889999999999999999999999988765   677899999999999999999999999999999999999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       229 F~s~  232 (234)
T 2bqp_A          229 FHSE  232 (234)
T ss_dssp             EEEE
T ss_pred             EEee
Confidence            9874

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=99.83  E-value=2.6e-21  Score=163.24  Aligned_cols=79  Identities=28%  Similarity=0.386  Sum_probs=72.5

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc--ccceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL--TSNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~--~~~~~i~~WsF   92 (274)
                      +.+|+|.+|+.|+|||+||+.+++|+|+|++.+.  |..|+|++.+||+++|+|+|||||||+||..  .+.|+|++|+|
T Consensus       158 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF  235 (239)
T 1dbn_A          158 TVQWDWINGGVAFATITYLAPNKTLIASLVYPSN--QTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSF  235 (239)
T ss_dssp             EEECCCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEEE
T ss_pred             eEcccccCCCEEEEEEEEeCCCcEEEEEEccCCC--CCcceEEEEechHHhCCccEEEEEEeccCCCccceeeEEEEEEe
Confidence            4567799999999999999999999999998753  5678999999999999999999999999999  99999999999


Q ss_pred             ccc
Q 045713           93 SRI   95 (274)
Q Consensus        93 ~s~   95 (274)
                      +++
T Consensus       236 ~s~  238 (239)
T 1dbn_A          236 TST  238 (239)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            863

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=99.83  E-value=3e-21  Score=162.50  Aligned_cols=79  Identities=24%  Similarity=0.455  Sum_probs=72.7

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~Ws   91 (274)
                      +.+|+|.+|+.|+|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+||..   .+.|+|++|+
T Consensus       153 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWs  230 (237)
T 1fny_A          153 TVPWNWTNGEVANVFISYEASTKSLTASLVYPSL--ETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWS  230 (237)
T ss_dssp             EEECCCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cccccccCCCEEEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCcEEEEEEEeeCCCCcccceeEEEEEE
Confidence            4567799999999999999999999999998753  5678999999999999999999999999999   9999999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       231 F~s~  234 (237)
T 1fny_A          231 FESN  234 (237)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9875

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=99.83  E-value=4e-21  Score=162.26  Aligned_cols=80  Identities=25%  Similarity=0.400  Sum_probs=73.3

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc--ccceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL--TSNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~--~~~~~i~~WsF   92 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|++.+||+.+|+|+|||||||+||..  .+.|+|++|+|
T Consensus       157 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF  234 (242)
T 1qnw_A          157 TVKWDWRNGEVADVVITYRAPTKSLTVCLSYPSD--GTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF  234 (242)
T ss_dssp             EEECCCCTTCCEEEEEEEEGGGTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEE
T ss_pred             eecccccCCCEEEEEEEEeCCCcEEEEEEecCCC--CcceeEEEeechHHhcCCceEEEEEeccCCCccceEEEEEEEEe
Confidence            4567799999999999999999999999998753  5679999999999999999999999999999  99999999999


Q ss_pred             cccC
Q 045713           93 SRIG   96 (274)
Q Consensus        93 ~s~~   96 (274)
                      +++.
T Consensus       235 ~s~l  238 (242)
T 1qnw_A          235 TSNL  238 (242)
T ss_dssp             EEEC
T ss_pred             Eeec
Confidence            8763

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=99.83  E-value=6.2e-21  Score=160.89  Aligned_cols=79  Identities=25%  Similarity=0.419  Sum_probs=72.0

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC---cccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI---LTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~---~~~~~~i~~Ws   91 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|++.+||+++|+|+|||||||+||.   ..+.|+|++|+
T Consensus       155 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWs  232 (239)
T 1gzc_A          155 TQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSS--GAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWS  232 (239)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cccccccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEE
Confidence            4567799999999999999999999999998753  567999999999999999999999999998   48999999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       233 F~s~  236 (239)
T 1gzc_A          233 FQAS  236 (239)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            9875

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=99.83  E-value=7.1e-21  Score=159.81  Aligned_cols=78  Identities=27%  Similarity=0.422  Sum_probs=71.9

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeee--cCcccceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSAST--GILTSNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsast--g~~~~~~~i~~WsF   92 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++ +  .|..|+|+..+||+++|+|+|||||||+|  |.. +.|+|++|+|
T Consensus       148 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF  223 (234)
T 2eig_A          148 AVNWNRVSGSLEKATIIYDSDTKILTVVMTH-Q--NGQITTISQEIDLKTVLPEKVSVGFSATTWNPER-ERHDIYSWSF  223 (234)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEE-T--TSCEEEEEEECCHHHHSCSEEEEEEEEEECSSCC-EEEEEEEEEE
T ss_pred             eecccccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEeEeechHHhcCCceEEEEEeeecCCCc-ceeEEEEEEE
Confidence            4567799999999999999999999999998 4  46789999999999999999999999999  999 9999999999


Q ss_pred             cccC
Q 045713           93 SRIG   96 (274)
Q Consensus        93 ~s~~   96 (274)
                      +++.
T Consensus       224 ~s~l  227 (234)
T 2eig_A          224 TSTL  227 (234)
T ss_dssp             EEEC
T ss_pred             EecC
Confidence            9864

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=99.83  E-value=7.5e-21  Score=160.56  Aligned_cols=79  Identities=27%  Similarity=0.349  Sum_probs=72.3

Q ss_pred             eeeeeecCC--CcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeee--cCcccceeEecc
Q 045713           15 NISLDLQSG--NPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSAST--GILTSNQYILGW   90 (274)
Q Consensus        15 ~~~~~l~~g--~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsast--g~~~~~~~i~~W   90 (274)
                      +.+|+|.+|  +.++|||+||+.+++|+|+|++.+.  |..|+|++.+||+++|+|+|||||||+|  |.. +.|+|++|
T Consensus       155 ~~~~~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsW  231 (242)
T 1fx5_A          155 AERWNKRYGLNNVANVEIIYEASSKTLTASLTYPSD--QTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQ-ATHEVLNW  231 (242)
T ss_dssp             EEECCCCCSGGGCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEEETTSC-EEEEEEEE
T ss_pred             eecccccCCCceeEEEEEEEeCCCCEEEEEEecCCC--CccceeeEEechHHhCCccEEEEEEecccCCCc-ceeEEEEE
Confidence            456778899  9999999999999999999998754  5678999999999999999999999999  999 99999999


Q ss_pred             cccccC
Q 045713           91 SFSRIG   96 (274)
Q Consensus        91 sF~s~~   96 (274)
                      +|+++.
T Consensus       232 sF~s~l  237 (242)
T 1fx5_A          232 YFTSTF  237 (242)
T ss_dssp             EEEEES
T ss_pred             EeEeec
Confidence            999864

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=99.83  E-value=8.3e-21  Score=158.17  Aligned_cols=78  Identities=28%  Similarity=0.430  Sum_probs=70.3

Q ss_pred             eeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEecccccc
Q 045713           18 LDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWSFSR   94 (274)
Q Consensus        18 ~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~WsF~s   94 (274)
                      ++|.+|+.++|||+||+.+++|+|+|++.+.  +.+|+|+..+||+++|||+|||||||+||..   .+.|+|++|+|++
T Consensus       125 ~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s  202 (223)
T 1dhk_B          125 VHDYDGQNAEVRITYNSSTKVFSVSLSNPST--GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSS  202 (223)
T ss_dssp             GGGTTTSCEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEEEE
T ss_pred             ccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEEEEe
Confidence            3455999999999999999999999998754  3479999999999999999999999999999   9999999999998


Q ss_pred             cCC
Q 045713           95 IGE   97 (274)
Q Consensus        95 ~~~   97 (274)
                      ++.
T Consensus       203 ~~~  205 (223)
T 1dhk_B          203 KFI  205 (223)
T ss_dssp             EC-
T ss_pred             ccc
Confidence            643

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=99.82  E-value=1.1e-20  Score=158.84  Aligned_cols=79  Identities=30%  Similarity=0.453  Sum_probs=72.2

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~Ws   91 (274)
                      ..+|+|.+|+.++|||+||+.+++|+|+|++.+.  +..|+|+..+||+.+|+|+|||||||+||..   .+.|+|++|+
T Consensus       150 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~~~~h~IlsWs  227 (233)
T 1n47_A          150 TTPFDMVYGEKANIVITYQASTKALAASLVFPVS--QTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWS  227 (233)
T ss_dssp             EEECCCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cccccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccccceeEEEEEE
Confidence            4567899999999999999999999999998754  3578999999999999999999999999999   9999999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       228 F~s~  231 (233)
T 1n47_A          228 FAVS  231 (233)
T ss_dssp             EEEE
T ss_pred             EEee
Confidence            9864

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=99.82  E-value=1e-20  Score=160.69  Aligned_cols=80  Identities=29%  Similarity=0.431  Sum_probs=73.2

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc--ccceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL--TSNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~--~~~~~i~~WsF   92 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+.+|+|+|||||||+||..  .+.|+|++|+|
T Consensus       151 t~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~H~IlsWsF  228 (253)
T 1sbf_A          151 TTSWDLANNKVAKVLITYDASTSLLVASLVYPSQ--RTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSF  228 (253)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSSCCCEEEEEEEEE
T ss_pred             eecccccCCCeeEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccceeeEEEEEEe
Confidence            4567799999999999999999999999998753  5678999999999999999999999999999  99999999999


Q ss_pred             cccC
Q 045713           93 SRIG   96 (274)
Q Consensus        93 ~s~~   96 (274)
                      ++..
T Consensus       229 ~s~l  232 (253)
T 1sbf_A          229 ASNL  232 (253)
T ss_dssp             EEEE
T ss_pred             Eeec
Confidence            9863

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=99.82  E-value=1.2e-20  Score=159.12  Aligned_cols=76  Identities=25%  Similarity=0.352  Sum_probs=69.7

Q ss_pred             eecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccccccc
Q 045713           19 DLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWSFSRI   95 (274)
Q Consensus        19 ~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~WsF~s~   95 (274)
                      .|.+|+.++|||+||+.+++|+|+|++.+.  +.+|+|+..+||+++|+|+|||||||+||..   .+.|+|++|+|++.
T Consensus       149 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~H~IlsWsF~s~  226 (240)
T 1ioa_A          149 HKYNGEKTDVQITYDSSNNDLRVFLHFTVS--QVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSSK  226 (240)
T ss_dssp             HHHCSSCEEEEEEEETTTTEEEEEEEETTT--CCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceeEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEEEEee
Confidence            345999999999999999999999998764  3479999999999999999999999999999   99999999999986


Q ss_pred             C
Q 045713           96 G   96 (274)
Q Consensus        96 ~   96 (274)
                      +
T Consensus       227 ~  227 (240)
T 1ioa_A          227 F  227 (240)
T ss_dssp             E
T ss_pred             C
Confidence            4

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=99.82  E-value=1.3e-20  Score=160.04  Aligned_cols=80  Identities=30%  Similarity=0.471  Sum_probs=73.2

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~Ws   91 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|+..+||+.+|+|+|||||||+||..   .+.|+|++|+
T Consensus       151 t~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWs  228 (253)
T 1g7y_A          151 TASWGLANGQNAEILITYNAATSLLVASLVHPSR--RTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWS  228 (253)
T ss_dssp             EEECCCCTTSEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEE
T ss_pred             eeccccCCCCeEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeCcCCCCcccceeEEEEEE
Confidence            4567799999999999999999999999998753  5678999999999999999999999999999   9999999999


Q ss_pred             ccccC
Q 045713           92 FSRIG   96 (274)
Q Consensus        92 F~s~~   96 (274)
                      |++..
T Consensus       229 F~s~l  233 (253)
T 1g7y_A          229 FASKL  233 (253)
T ss_dssp             EEEEE
T ss_pred             EEeeC
Confidence            99863

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=99.82  E-value=1.6e-20  Score=158.61  Aligned_cols=80  Identities=33%  Similarity=0.505  Sum_probs=73.0

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeee----cCc---ccceeE
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSAST----GIL---TSNQYI   87 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsast----g~~---~~~~~i   87 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+.+|+|+|||||||+|    |..   .+.|+|
T Consensus       150 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTg~~~G~~~~~~~~h~I  227 (242)
T 1wbf_A          150 TVPFTLDNGGIANVVIKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDI  227 (242)
T ss_dssp             EEECCCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEE
T ss_pred             eeeeEecCCCEEEEEEEEeCCCCEEEEEEccCCC--CCcceEEEEechHHhcCCceEEEEEEeecCcCCccccccceEEE
Confidence            4567799999999999999999999999998754  5578999999999999999999999999    888   899999


Q ss_pred             ecccccccC
Q 045713           88 LGWSFSRIG   96 (274)
Q Consensus        88 ~~WsF~s~~   96 (274)
                      ++|+|+++.
T Consensus       228 lsWsF~s~l  236 (242)
T 1wbf_A          228 LSWSFSASL  236 (242)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEeEecC
Confidence            999998863

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=99.81  E-value=1.8e-20  Score=158.09  Aligned_cols=80  Identities=33%  Similarity=0.466  Sum_probs=73.2

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCccccccc--ceeEeEEeeecCc---ccceeEec
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLD--TMHVGFSASTGIL---TSNQYILG   89 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~--~~~vGfsastg~~---~~~~~i~~   89 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|+..+||+.+|+|  +|||||||+||..   .+.|+|++
T Consensus       150 s~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~~~vGFSAsTG~~~~~~~~h~Ils  227 (238)
T 1f9k_A          150 TLHFQLENGGVANVVIKYDSPTKILNVVLAFHSV--GTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIIS  227 (238)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEE
T ss_pred             eEeecccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCceeEEEEechHHhCCCCceEEEEEEeCcCCCCcccceEEEEE
Confidence            4567799999999999999999999999998753  567899999999999999  9999999999999   99999999


Q ss_pred             ccccccC
Q 045713           90 WSFSRIG   96 (274)
Q Consensus        90 WsF~s~~   96 (274)
                      |+|+++.
T Consensus       228 WsF~s~~  234 (238)
T 1f9k_A          228 WSFTSSL  234 (238)
T ss_dssp             EEEEEEC
T ss_pred             eEeEeec
Confidence            9998763

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=99.81  E-value=9.5e-21  Score=158.46  Aligned_cols=75  Identities=28%  Similarity=0.427  Sum_probs=68.7

Q ss_pred             eecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccccccc
Q 045713           19 DLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWSFSRI   95 (274)
Q Consensus        19 ~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~WsF~s~   95 (274)
                      .|.+|+.++|||+||+.+++|+|+|++.+..  .+|+|+..+||+++|+|+|||||||+||..   .+.|+|++|+|+++
T Consensus       147 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~h~IlsWsF~s~  224 (226)
T 1avb_A          147 GHNNGEKAEVRITYDSPKNDLRVSLLYPSSE--EKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN  224 (226)
T ss_dssp             GGGTTCEEEEEEEEEGGGTEEEEEEEETTTT--EEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEEEE
T ss_pred             cccCCCeEEEEEEEeCCCcEEEEEEeecCCC--ccceEEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEEEEee
Confidence            4559999999999999999999999987543  378999999999999999999999999999   99999999999864

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=99.81  E-value=1.7e-20  Score=159.32  Aligned_cols=80  Identities=29%  Similarity=0.462  Sum_probs=73.2

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~Ws   91 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|+..+||+.+|||+|||||||+||..   .+.|+|++|+
T Consensus       150 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWs  227 (252)
T 1fat_A          150 TTRWDFVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWS  227 (252)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEE
T ss_pred             eecccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCCcccceEEEEEEE
Confidence            4567799999999999999999999999998753  5678999999999999999999999999999   9999999999


Q ss_pred             ccccC
Q 045713           92 FSRIG   96 (274)
Q Consensus        92 F~s~~   96 (274)
                      |++..
T Consensus       228 F~s~l  232 (252)
T 1fat_A          228 FASKL  232 (252)
T ss_dssp             EEEEE
T ss_pred             EEeeC
Confidence            99863

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=99.80  E-value=3.7e-20  Score=155.40  Aligned_cols=77  Identities=22%  Similarity=0.396  Sum_probs=70.8

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC--cccceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI--LTSNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~--~~~~~~i~~WsF   92 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++ +  +|..|+|++.+||+++|+|+|||||| +||.  ..+.|+|++|+|
T Consensus       150 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFS-sTG~~~~~~~h~IlsWsF  225 (232)
T 1v6i_A          150 TVPWNSVSGAVVKVTVIYDSSTKTLSVAVTN-D--NGDITTIAQVVDLKAKLPERVKFGFS-ASGSLGGRQIHLIRSWSF  225 (232)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEEC-T--TSCEEEEEEECCHHHHSCSEEEEEEE-EECCSSBCCEEEEEEEEE
T ss_pred             cccccccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEEEEechHHhCCccEEEEEE-ecCCCccccEEEEEEEEE
Confidence            3566799999999999999999999999998 4  46789999999999999999999999 9999  689999999999


Q ss_pred             ccc
Q 045713           93 SRI   95 (274)
Q Consensus        93 ~s~   95 (274)
                      +++
T Consensus       226 ~s~  228 (232)
T 1v6i_A          226 TST  228 (232)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            875

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=99.80  E-value=6.6e-20  Score=154.88  Aligned_cols=79  Identities=30%  Similarity=0.416  Sum_probs=72.3

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      +.+|+|.+|+.++|||+||+.+++|+|+|++.+.   ..|+|+..+||+.+|||+|||||||+||...+.|+|++|+|++
T Consensus       156 s~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s  232 (240)
T 2fmd_A          156 ASKWDWQNGKTATAHISYNSASKRLSVVSSYPNS---SPVVVSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRS  232 (240)
T ss_dssp             EEECCCCSSCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECCSSCBCCEEEEEEEEE
T ss_pred             eeEEEeeCCCEEEEEEEEeCCCCEEEEEEecCCC---CceEEEEEechHHhCCCceEEEEEeccCCccccEEEEEEEeEe
Confidence            3466788999999999999999999999998754   4789999999999999999999999999999999999999987


Q ss_pred             cC
Q 045713           95 IG   96 (274)
Q Consensus        95 ~~   96 (274)
                      +.
T Consensus       233 ~~  234 (240)
T 2fmd_A          233 SL  234 (240)
T ss_dssp             EE
T ss_pred             cC
Confidence            53

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=99.80  E-value=3.9e-20  Score=156.34  Aligned_cols=77  Identities=27%  Similarity=0.437  Sum_probs=70.2

Q ss_pred             eeeeecC---CCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccc
Q 045713           16 ISLDLQS---GNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSF   92 (274)
Q Consensus        16 ~~~~l~~---g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF   92 (274)
                      .+|+|.+   |+.++|||+||+.+++|+|+|++.+.   ..|+|+..+||+.+|+|+|||||||+|| ..+.|+|++|+|
T Consensus       159 ~~~~l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~~vGFSAsTG-~~~~h~IlsWsF  234 (243)
T 1gsl_A          159 TRWENDDAYGSSIATAHITYDARSKILTVLLSYEHG---RDYILSHVVDLAKVLPQKVRIGFSAGVG-YDEVTYILSWHF  234 (243)
T ss_dssp             EECCHHHHTSCCEEEEEEEEETTTTEEEEEEEETTS---CEEEEEEECCHHHHSCSEEEEEEEEEEC-BSEEEEEEEEEE
T ss_pred             eeeEEeccCCCcEEEEEEEEeCCCCEEEEEEecCCC---CceeEEEEechHHhCCCceEEEEEeccC-CcceeEEEEEEE
Confidence            4556777   99999999999999999999998754   4689999999999999999999999999 999999999999


Q ss_pred             cccC
Q 045713           93 SRIG   96 (274)
Q Consensus        93 ~s~~   96 (274)
                      +++.
T Consensus       235 ~s~l  238 (243)
T 1gsl_A          235 FSTL  238 (243)
T ss_dssp             EEEC
T ss_pred             Eeec
Confidence            8763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.74  E-value=1.2e-18  Score=153.10  Aligned_cols=92  Identities=28%  Similarity=0.457  Sum_probs=75.6

Q ss_pred             ccChhhHHHhhcCccceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceee
Q 045713          183 RFSYKDLYKATKGFKELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHG  256 (274)
Q Consensus       183 ~~~~~el~~at~~f~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g  256 (274)
                      +..++|+...+..|.+.||+|+||.||+|.+..     .+..||||+++.. .....++|.+|+.+|.+++|||||+|+|
T Consensus        17 ~~~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g   96 (308)
T 4gt4_A           17 QAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG   96 (308)
T ss_dssp             --CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCCcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcce
Confidence            345556666666778999999999999999742     3578999999755 3344678999999999999999999999


Q ss_pred             EEEeCCeEEEEEeccCCC
Q 045713          257 YCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       257 ~~~~~~~~~LV~Ey~~~G  274 (274)
                      +|...+.++||||||++|
T Consensus        97 ~~~~~~~~~lV~Ey~~~G  114 (308)
T 4gt4_A           97 VVTKDQPLSMIFSYCSHG  114 (308)
T ss_dssp             EECSSSSCEEEEECCSSC
T ss_pred             EEEECCEEEEEEEcCCCC
Confidence            999999999999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.72  E-value=1.8e-17  Score=146.80  Aligned_cols=78  Identities=31%  Similarity=0.569  Sum_probs=71.1

Q ss_pred             cceeeeccCceEEEEEEcC-----CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          197 KELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .+.||+|+||.||+|.+..     ++..||||+++..+....++|.+|+.+|++++|||||+++|+|.+.+.++||||||
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~  125 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM  125 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            3789999999999998752     46889999998877777889999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       126 ~~G  128 (329)
T 4aoj_A          126 RHG  128 (329)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.72  E-value=9.7e-18  Score=146.68  Aligned_cols=78  Identities=29%  Similarity=0.560  Sum_probs=69.0

Q ss_pred             cceeeeccCceEEEEEEcC-----CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          197 KELIGKGGFGKVYKGVLST-----SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      .+.||+|+||.||+|.+..     .+..||||+++..+....++|.+|+.+|++++|||||+++|+|.+.+.++||||||
T Consensus        18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~   97 (299)
T 4asz_A           18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM   97 (299)
T ss_dssp             EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence            4789999999999998742     46789999998877777889999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        98 ~~G  100 (299)
T 4asz_A           98 KHG  100 (299)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            987

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.68  E-value=5.5e-17  Score=147.89  Aligned_cols=77  Identities=27%  Similarity=0.384  Sum_probs=70.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....|..||||++........+.+.+|+.+|.+++|||||++++++...+.+|||||||++|
T Consensus       157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG  233 (423)
T 4fie_A          157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  233 (423)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCC
Confidence            78999999999999998889999999997664444567899999999999999999999999999999999999986

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.62  E-value=1.4e-15  Score=135.42  Aligned_cols=77  Identities=25%  Similarity=0.383  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|+.||||.+...  .....+.|.+|+.+|.+|+|||||++++++.+.+.+|||||||++|
T Consensus        30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg  108 (350)
T 4b9d_A           30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG  108 (350)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            7899999999999999888999999999754  4455778999999999999999999999999999999999999987

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.61  E-value=2.1e-15  Score=131.17  Aligned_cols=78  Identities=24%  Similarity=0.383  Sum_probs=68.4

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey  270 (274)
                      .+.||+|+||.||+|.....+..||+|.+...  .....+.|.+|+.+|.+++|||||+++++|..    .+.++|||||
T Consensus        31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy  110 (290)
T 3fpq_A           31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL  110 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence            46799999999999999888999999999754  45556789999999999999999999999865    2457999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |++|
T Consensus       111 ~~gg  114 (290)
T 3fpq_A          111 MTSG  114 (290)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9987

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.61  E-value=7.7e-16  Score=136.97  Aligned_cols=77  Identities=27%  Similarity=0.384  Sum_probs=70.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....+|..||||+++.......+.+.+|+.+|.+++|||||++++++...+.+|||||||++|
T Consensus        80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg  156 (346)
T 4fih_A           80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  156 (346)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            78999999999999998889999999997554344567899999999999999999999999999999999999986

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.60  E-value=2.3e-16  Score=100.06  Aligned_cols=44  Identities=30%  Similarity=0.457  Sum_probs=41.5

Q ss_pred             CCeeeeecCcccccccceeEeEEeeecCcccceeEecccccccC
Q 045713           53 RPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIG   96 (274)
Q Consensus        53 ~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s~~   96 (274)
                      +|+|+..+||+++|+|+|||||||+||...+.|+|++|+|++++
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~   46 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL   46 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEE
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeec
Confidence            47899999999999999999999999999999999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=133.47  Aligned_cols=75  Identities=29%  Similarity=0.507  Sum_probs=65.3

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      |.+.||+|+||.||+|.+.   ..||||.++..  +.+..++|.+|+.+|++++|||||+++|+|. .+.++||||||++
T Consensus        40 l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~g  115 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEG  115 (307)
T ss_dssp             EEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSS
T ss_pred             EeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCC
Confidence            4588999999999999975   35999999744  4566788999999999999999999999986 4678999999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       116 G  116 (307)
T 3omv_A          116 S  116 (307)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.58  E-value=5.7e-15  Score=129.32  Aligned_cols=75  Identities=33%  Similarity=0.460  Sum_probs=60.7

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC----eEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ----ELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~----~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|.+.  |..||||+++..... ...+.+|+..+.+++|||||+++|+|...+    .++||||||+
T Consensus         8 ~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~   84 (303)
T 3hmm_A            8 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE   84 (303)
T ss_dssp             EEEEEECSSSEEEEEEET--TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred             EEEEeeCCCeEEEEEEEC--CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC
Confidence            378999999999999985  789999999654321 223345666677899999999999998754    5799999999


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        85 ~g   86 (303)
T 3hmm_A           85 HG   86 (303)
T ss_dssp             TC
T ss_pred             CC
Confidence            87

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.57  E-value=4.7e-15  Score=130.02  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=69.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||+||++....+|..||+|.++..   .....+.+.+|+.+|.+++|||||++++++.+.+.++||||||++|
T Consensus        38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG  117 (311)
T 4aw0_A           38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG  117 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence            7899999999999999888999999999753   1233567999999999999999999999999999999999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.56  E-value=1.1e-14  Score=127.17  Aligned_cols=77  Identities=21%  Similarity=0.365  Sum_probs=65.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------------eE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------------EL  264 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------------~~  264 (274)
                      +.||+|+||.||++....+|..||||.++.. .....+.+.+|+.+|.+++|||||++++++...+            .+
T Consensus        11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l   90 (299)
T 4g31_A           11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYL   90 (299)
T ss_dssp             EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEE
Confidence            7899999999999999888999999999754 4445678999999999999999999999987644            37


Q ss_pred             EEEEeccCCC
Q 045713          265 LLVYNYMHNK  274 (274)
Q Consensus       265 ~LV~Ey~~~G  274 (274)
                      +||||||++|
T Consensus        91 ~ivmE~~~gg  100 (299)
T 4g31_A           91 YIQMQLCRKE  100 (299)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEecCCCC
Confidence            9999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.52  E-value=2.7e-14  Score=126.52  Aligned_cols=72  Identities=25%  Similarity=0.358  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||||.++....     +.+|+.+|.+++|||||++++++.+.+.++||||||++|
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg  135 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG  135 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            679999999999999988899999999976421     246999999999999999999999999999999999987

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.51  E-value=3.2e-14  Score=122.76  Aligned_cols=75  Identities=28%  Similarity=0.481  Sum_probs=63.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++....+|+.||+|.++..   .......+.+|+.+|.+++|||||++++++...+.++||||||.
T Consensus        19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   96 (275)
T 3hyh_A           19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG   96 (275)
T ss_dssp             EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence            7899999999999999888999999999754   22335679999999999999999999999999999999999995

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.51  E-value=2e-14  Score=128.35  Aligned_cols=78  Identities=22%  Similarity=0.377  Sum_probs=66.1

Q ss_pred             cceeeeccCceEEEEEEcCC-----CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCC-CCccceeeEEEeC-CeEEEEE
Q 045713          197 KELIGKGGFGKVYKGVLSTS-----GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRH-RNLVQLHGYCRRK-QELLLVY  268 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~-----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H-~Nlv~l~g~~~~~-~~~~LV~  268 (274)
                      .+.||+|+||.||+|.....     +..||||.++.. .....++|.+|+.+|.+++| ||||+++|+|.+. +.++|||
T Consensus        69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~  148 (353)
T 4ase_A           69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV  148 (353)
T ss_dssp             EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred             eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence            37899999999999987542     257999999865 44556789999999999965 8999999999765 5689999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      |||++|
T Consensus       149 Ey~~~G  154 (353)
T 4ase_A          149 EFCKFG  154 (353)
T ss_dssp             ECCTTE
T ss_pred             EcCCCC
Confidence            999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.47  E-value=2.1e-14  Score=125.68  Aligned_cols=77  Identities=19%  Similarity=0.262  Sum_probs=61.1

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++...   ..+..||+|.++..  .......+.+|+.+|.+++|||||++++++...+.++||||||+
T Consensus        30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~  109 (304)
T 3ubd_A           30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR  109 (304)
T ss_dssp             EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCT
T ss_pred             EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCC
Confidence            78999999999999863   34688999999754  22234468899999999999999999999999999999999999


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       110 gg  111 (304)
T 3ubd_A          110 GG  111 (304)
T ss_dssp             TC
T ss_pred             CC
Confidence            87

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.47  E-value=2.7e-13  Score=119.14  Aligned_cols=94  Identities=21%  Similarity=0.266  Sum_probs=80.8

Q ss_pred             CCccChhhHHHhhcC----------cc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCC
Q 045713          181 PQRFSYKDLYKATKG----------FK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRH  248 (274)
Q Consensus       181 ~~~~~~~el~~at~~----------f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H  248 (274)
                      +..++++++..+++.          |.  +.||+|+||.||++....+|..||||.+........+.+.+|+.++.+++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            356888888888764          22  589999999999999987799999999986655556789999999999999


Q ss_pred             CCccceeeEEEeCCeEEEEEeccCCC
Q 045713          249 RNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       249 ~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +||++++++|...+..+|||||+++|
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~  127 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGG  127 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCC
Confidence            99999999999999999999999876

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.46  E-value=2.2e-13  Score=129.06  Aligned_cols=77  Identities=30%  Similarity=0.462  Sum_probs=72.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.+........+.+.+|+.+|.+++|||||+|++++...+.++||||||++|
T Consensus       163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg  239 (573)
T 3uto_A          163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG  239 (573)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence            78999999999999998889999999998776666778999999999999999999999999999999999999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.44  E-value=2e-13  Score=123.81  Aligned_cols=76  Identities=24%  Similarity=0.418  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||+|....+|..||||+++..  .....+.+++|+.+|.+++|||||++++++...      +.+|||||
T Consensus        60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE  139 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD  139 (398)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence            7899999999999999888999999999754  345567899999999999999999999998643      56899999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      ||++
T Consensus       140 ~~~g  143 (398)
T 4b99_A          140 LMES  143 (398)
T ss_dssp             CCSE
T ss_pred             CCCC
Confidence            9964

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.39  E-value=1e-13  Score=127.29  Aligned_cols=91  Identities=21%  Similarity=0.223  Sum_probs=76.8

Q ss_pred             cChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCH---HhHHHHHHHHHHhcCCCCCCccceeeEE
Q 045713          184 FSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE---QWMKEFVSEIVSMGALRHRNLVQLHGYC  258 (274)
Q Consensus       184 ~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~Nlv~l~g~~  258 (274)
                      +.++++...+.+|.  ++||+|+||.||++.....+..||+|+++....   .....+.+|..++.+++|+||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            44566666777777  899999999999999988889999999965311   1123488999999999999999999999


Q ss_pred             EeCCeEEEEEeccCCC
Q 045713          259 RRKQELLLVYNYMHNK  274 (274)
Q Consensus       259 ~~~~~~~LV~Ey~~~G  274 (274)
                      ...+.++||||||++|
T Consensus       144 ~~~~~~~lV~Ey~~gg  159 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGG  159 (437)
T ss_dssp             ECSSEEEEEECCCTTC
T ss_pred             eeCCEEEEEEecCCCC
Confidence            9999999999999886

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.39  E-value=2.1e-12  Score=112.40  Aligned_cols=77  Identities=25%  Similarity=0.457  Sum_probs=72.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+........+.|.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~   92 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG   92 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCC
Confidence            78999999999999998889999999997777777889999999999999999999999999999999999999876

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.38  E-value=2.7e-13  Score=118.80  Aligned_cols=92  Identities=45%  Similarity=0.761  Sum_probs=78.8

Q ss_pred             CccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEE
Q 045713          182 QRFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCR  259 (274)
Q Consensus       182 ~~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~  259 (274)
                      .++++.++..++.+|.  +.||+|+||.||+|... ++..||+|.+........+.+.+|+.++.+++|+||++++++|.
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  105 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD  105 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            3455667777788887  78999999999999975 47899999988766566788999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCC
Q 045713          260 RKQELLLVYNYMHNK  274 (274)
Q Consensus       260 ~~~~~~LV~Ey~~~G  274 (274)
                      ..+..++||||+++|
T Consensus       106 ~~~~~~lv~e~~~~~  120 (321)
T 2qkw_B          106 ERNEMILIYKYMENG  120 (321)
T ss_dssp             CTTCCEEEEECCTTC
T ss_pred             CCCeEEEEEEcCCCC
Confidence            999999999999875

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.38  E-value=1.8e-12  Score=116.42  Aligned_cols=77  Identities=34%  Similarity=0.496  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.++.......++|.+|+.+|.+++|+||++++++|...+.++|||||+++|
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            67999999999999998889999999998776667788999999999999999999999999999999999999876

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.36  E-value=6.4e-13  Score=116.48  Aligned_cols=93  Identities=41%  Similarity=0.751  Sum_probs=80.0

Q ss_pred             CCccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeE
Q 045713          181 PQRFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGY  257 (274)
Q Consensus       181 ~~~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~  257 (274)
                      ...++++++...+.+|.  +.||+|+||.||++... ++..||||++.... ......|.+|+.++.+++|+||++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            46789999999999998  89999999999999865 47899999997653 2223468999999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCC
Q 045713          258 CRRKQELLLVYNYMHNK  274 (274)
Q Consensus       258 ~~~~~~~~LV~Ey~~~G  274 (274)
                      |...+..++||||+++|
T Consensus        96 ~~~~~~~~lv~e~~~~~  112 (326)
T 3uim_A           96 CMTPTERLLVYPYMANG  112 (326)
T ss_dssp             ECCSSCCEEEEECCTTC
T ss_pred             EecCCceEEEEEeccCC
Confidence            99999999999999876

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=99.35  E-value=1.7e-12  Score=110.55  Aligned_cols=71  Identities=18%  Similarity=0.196  Sum_probs=56.8

Q ss_pred             eec-CCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEeccccccc
Q 045713           19 DLQ-SGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRI   95 (274)
Q Consensus        19 ~l~-~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s~   95 (274)
                      ++. +|++++|||+||+.  +|+|+|.+.+.. +.+++++  ++ ...||+++||||||+||...+.|+|++|+|.+.
T Consensus       157 ~~~n~g~~~~v~I~Y~~~--~L~V~l~~~~~~-~~~~~~~--~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ilswsf~sl  228 (253)
T 2dur_A          157 DFRNRDHDTFLAVRYSRG--RLTVMTDLEDKN-EWKNCID--IT-GVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL  228 (253)
T ss_dssp             CCBTCSSCEEEEEEEETT--EEEEEEECSSSS-CCEEEEE--EC-CEECCSSBEEEEEEEESSSCCEEEEEEEEEEEC
T ss_pred             hhccCCCCeEEEEEEECC--EEEEEEeCCCCC-CceEEEE--eC-CcccCCCcEEEEEeccCCCcceEEEEEEEEEec
Confidence            453 48899999999976  899999976542 3344443  34 345899999999999999999999999999874

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.35  E-value=2.6e-12  Score=111.51  Aligned_cols=92  Identities=39%  Similarity=0.665  Sum_probs=80.8

Q ss_pred             CCccChhhHHHhhcCcc--------ceeeeccCceEEEEEEcCCCceEEEEEEccC----CHHhHHHHHHHHHHhcCCCC
Q 045713          181 PQRFSYKDLYKATKGFK--------ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD----SEQWMKEFVSEIVSMGALRH  248 (274)
Q Consensus       181 ~~~~~~~el~~at~~f~--------~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l~H  248 (274)
                      ...|++.++..++.+|.        +.||+|+||.||+|...  +..||+|.+...    .....+.|.+|+.++.+++|
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            46789999999999997        46999999999999874  789999999653    23446789999999999999


Q ss_pred             CCccceeeEEEeCCeEEEEEeccCCC
Q 045713          249 RNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       249 ~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +||++++++|...+..++||||+++|
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~  115 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNG  115 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCC
Confidence            99999999999999999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.34  E-value=1.7e-12  Score=116.64  Aligned_cols=77  Identities=30%  Similarity=0.546  Sum_probs=69.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....+..||||.++.. ......+|.+|+.+|.+++|+||++++|+|...+.++||||||++|
T Consensus       120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g  197 (377)
T 3cbl_A          120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG  197 (377)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence            7899999999999999877899999999765 3445568999999999999999999999999889999999999876

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=99.33  E-value=3.3e-12  Score=109.12  Aligned_cols=75  Identities=20%  Similarity=0.279  Sum_probs=60.5

Q ss_pred             eeec-CCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEeccccccc
Q 045713           18 LDLQ-SGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRI   95 (274)
Q Consensus        18 ~~l~-~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s~   95 (274)
                      +++. +|.+++|||+||+.  +|+|++.+...+......++..+| +..||+++||||||+||...+.|+|++|+|...
T Consensus       176 ~~~~n~g~~~~~~I~Y~~~--~L~V~l~~~~~~~~~~~~~~~~vd-~~~LP~~~~vGfSAaTG~~~e~hdIlsw~~~~l  251 (260)
T 1gv9_A          176 RDFRNKPYPVRAKITYYQK--TLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFLTFQL  251 (260)
T ss_dssp             CCCBSCSSCEEEEEEEETT--EEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEEEEEE
T ss_pred             hhhccCCCcEEEEEEEECC--EEEEEEeeccCCCCCcceEEEEEc-ccccCCCcEEEEEEeCCCCcceEEEEEEEEEEe
Confidence            3443 48999999999987  899999874211122346788888 678999999999999999999999999999863

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.33  E-value=1.9e-12  Score=116.31  Aligned_cols=78  Identities=28%  Similarity=0.618  Sum_probs=68.3

Q ss_pred             cceeeeccCceEEEEEEc---CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLS---TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|...   ..+..||||.++.. .....++|.+|+.+|.+++|+||++++|+|...+..+|||||++
T Consensus        50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  129 (373)
T 2qol_A           50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME  129 (373)
T ss_dssp             CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence            379999999999999875   34678999999765 45567789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       130 ~~  131 (373)
T 2qol_A          130 NG  131 (373)
T ss_dssp             TC
T ss_pred             CC
Confidence            76

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.33  E-value=3.8e-12  Score=110.52  Aligned_cols=77  Identities=23%  Similarity=0.394  Sum_probs=69.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+........+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  102 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG  102 (297)
T ss_dssp             EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCC
Confidence            78999999999999987788999999997654444667899999999999999999999999999999999999876

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.33  E-value=3.9e-12  Score=112.29  Aligned_cols=77  Identities=27%  Similarity=0.420  Sum_probs=70.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||||.+...  .....+.+.+|+.+|.+++|+||+++++++...+.+++|||||++|
T Consensus        21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~   99 (328)
T 3fe3_A           21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG   99 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence            7899999999999999878999999999754  4455678999999999999999999999999999999999999876

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.32  E-value=6.8e-12  Score=109.66  Aligned_cols=65  Identities=22%  Similarity=0.386  Sum_probs=56.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ  262 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~  262 (274)
                      +.||+|+||.||++....+|..||||+++.. .....+.+.+|+.+|.+++||||++++++|.+.+
T Consensus        12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            7899999999999999878999999999754 3345678999999999999999999999986654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.31  E-value=7e-12  Score=108.46  Aligned_cols=77  Identities=8%  Similarity=0.142  Sum_probs=69.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...   .....+.|.+|+..+.+++|+||+++++++...+..+|||||+++|
T Consensus        37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~  116 (286)
T 3uqc_A           37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG  116 (286)
T ss_dssp             EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred             EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence            7899999999999999877899999999765   2445678999999999999999999999999999999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.31  E-value=4.3e-12  Score=111.94  Aligned_cols=84  Identities=21%  Similarity=0.327  Sum_probs=71.6

Q ss_pred             HhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC-----CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe
Q 045713          191 KATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-----SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE  263 (274)
Q Consensus       191 ~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~  263 (274)
                      ....+|.  +.||+|+||.||++.....+..||+|.+...     .....+.+.+|+.++.+++|+||++++++|...+.
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            3333444  8999999999999999888899999998643     23446789999999999999999999999999999


Q ss_pred             EEEEEeccCCC
Q 045713          264 LLLVYNYMHNK  274 (274)
Q Consensus       264 ~~LV~Ey~~~G  274 (274)
                      .+|||||+++|
T Consensus       103 ~~lv~e~~~gg  113 (345)
T 3hko_A          103 ICLVMELCHGG  113 (345)
T ss_dssp             EEEEEECCCSC
T ss_pred             EEEEEeCCCCC
Confidence            99999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.30  E-value=5.9e-12  Score=112.75  Aligned_cols=80  Identities=20%  Similarity=0.363  Sum_probs=66.8

Q ss_pred             hcCcc--ceeeeccCceEEEEEEc---CCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEE
Q 045713          193 TKGFK--ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLL  266 (274)
Q Consensus       193 t~~f~--~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~L  266 (274)
                      .+.|.  +.||+|+||.||+|..+   ..+..||+|.+....  ....+.+|+.+|..+ +|+|||++++++...+.++|
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l   97 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI   97 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence            33454  79999999999999763   346789999996543  234678999999988 69999999999999999999


Q ss_pred             EEeccCCC
Q 045713          267 VYNYMHNK  274 (274)
Q Consensus       267 V~Ey~~~G  274 (274)
                      |||||++|
T Consensus        98 vmE~~~g~  105 (361)
T 4f9c_A           98 AMPYLEHE  105 (361)
T ss_dssp             EEECCCCC
T ss_pred             EEeCCCcc
Confidence            99999976

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.30  E-value=7.3e-12  Score=110.15  Aligned_cols=77  Identities=34%  Similarity=0.636  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCC---ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....+   ..||||.++.. .....+.|.+|+.++.+++|+||++++++|...+..+|||||+++
T Consensus        55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  134 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN  134 (325)
T ss_dssp             EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTT
T ss_pred             eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCC
Confidence            78999999999999986444   45999999865 455677899999999999999999999999988999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       135 ~  135 (325)
T 3kul_A          135 G  135 (325)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.30  E-value=1.4e-11  Score=111.27  Aligned_cols=77  Identities=27%  Similarity=0.380  Sum_probs=71.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+..........+.+|+.+|.+++|+||++++++|...+.++|||||+++|
T Consensus        57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg  133 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG  133 (387)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCC
Confidence            78999999999999998888999999998766666678999999999999999999999999999999999999876

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.30  E-value=1.2e-11  Score=106.75  Aligned_cols=76  Identities=29%  Similarity=0.508  Sum_probs=68.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.+...  .......+.+|+.++.+++|+||+++++++...+..+|||||+++
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   85 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence            7899999999999999888899999999754  334457889999999999999999999999999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.29  E-value=1.1e-11  Score=118.45  Aligned_cols=77  Identities=19%  Similarity=0.264  Sum_probs=65.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC------CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD------SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~------~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ++||+|+||.||++....+|..||+|.++..      ..........++.++..++|||||+|++++...+.+|||||||
T Consensus       195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~  274 (689)
T 3v5w_A          195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM  274 (689)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecC
Confidence            7899999999999999988999999999643      1122223344577888999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       275 ~GG  277 (689)
T 3v5w_A          275 NGG  277 (689)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.29  E-value=2e-11  Score=105.76  Aligned_cols=77  Identities=25%  Similarity=0.401  Sum_probs=69.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...   .....+.|.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~   96 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP   96 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence            7899999999999998878899999998543   3455678999999999999999999999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.29  E-value=2.9e-12  Score=110.16  Aligned_cols=78  Identities=27%  Similarity=0.483  Sum_probs=69.3

Q ss_pred             cceeeeccCceEEEEEEcCCC-------ceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVLSTSG-------LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      .+.||+|+||.||++.....+       ..||+|.+........+.|.+|+.++.+++|+||++++++|...+..++|||
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   92 (289)
T 4fvq_A           13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE   92 (289)
T ss_dssp             EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred             eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence            378999999999999886544       4699999977666667889999999999999999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        93 ~~~~~   97 (289)
T 4fvq_A           93 FVKFG   97 (289)
T ss_dssp             CCTTC
T ss_pred             CCCCC
Confidence            99875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.28  E-value=2e-12  Score=117.79  Aligned_cols=89  Identities=24%  Similarity=0.241  Sum_probs=73.9

Q ss_pred             hhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          186 YKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       186 ~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      ++++.....+|.  ++||+|+||.||++.....+..+|+|.++...   ......+.+|+.++..++|||||+++++|..
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            345555556666  79999999999999998888999999996531   1123357899999999999999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      .+.++||||||++|
T Consensus       141 ~~~~~lV~E~~~gg  154 (410)
T 3v8s_A          141 DRYLYMVMEYMPGG  154 (410)
T ss_dssp             SSEEEEEECCCTTE
T ss_pred             CCEEEEEEeCCCCC
Confidence            99999999999876

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.28  E-value=1.4e-11  Score=110.22  Aligned_cols=77  Identities=30%  Similarity=0.414  Sum_probs=70.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...  .....+.+.+|+.++.+++||||++++++|...+..++||||+++|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg  113 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG  113 (362)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence            7899999999999999888899999999754  3455678999999999999999999999999999999999999876

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.28  E-value=5.4e-12  Score=110.20  Aligned_cols=76  Identities=21%  Similarity=0.210  Sum_probs=64.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|....++..||||++...  .......+..|+..+.++ +|+||++++++|...+.++|||||+.+
T Consensus        63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~  141 (311)
T 3p1a_A           63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGP  141 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred             heeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEeccCC
Confidence            7899999999999999878999999998654  344455677777766665 899999999999999999999999953

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.28  E-value=1.3e-11  Score=105.50  Aligned_cols=77  Identities=26%  Similarity=0.355  Sum_probs=70.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+........+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   91 (277)
T 3f3z_A           15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG   91 (277)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCC
Confidence            78999999999999998888899999997654445678999999999999999999999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.28  E-value=1.4e-11  Score=106.00  Aligned_cols=77  Identities=25%  Similarity=0.411  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+||+|+||.||++.....+..||+|.+........+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            58999999999999988778999999998765555678999999999999999999999999999999999999764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.27  E-value=1.9e-11  Score=109.40  Aligned_cols=77  Identities=23%  Similarity=0.369  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++....+|..+|+|.+.....      ...+.+.+|+.+|.+++||||+++++++...+.++|||||+
T Consensus        18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~   97 (361)
T 2yab_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV   97 (361)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcC
Confidence            789999999999999988899999999975421      13568999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        98 ~gg  100 (361)
T 2yab_A           98 SGG  100 (361)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            876

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.27  E-value=6.3e-12  Score=109.87  Aligned_cols=75  Identities=32%  Similarity=0.525  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...  +..||||.+...  .....++|.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        43 ~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  119 (309)
T 3p86_A           43 EKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG  119 (309)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred             eEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence            78999999999999875  789999999765  3455678999999999999999999999999999999999999876

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.27  E-value=9.8e-12  Score=110.56  Aligned_cols=77  Identities=25%  Similarity=0.370  Sum_probs=68.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-----HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-----EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....+..||+|.+....     ....+.+.+|+.++.+++|+||++++++|...+.++||||||+
T Consensus        30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~  109 (351)
T 3c0i_A           30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD  109 (351)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence            78999999999999998889999999986421     1235679999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       110 g~  111 (351)
T 3c0i_A          110 GA  111 (351)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.27  E-value=9.4e-12  Score=109.43  Aligned_cols=77  Identities=23%  Similarity=0.329  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+.... ....+.+.+|+.++.+++|+||++++++|...+..+|||||+++|
T Consensus        13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~   90 (323)
T 3tki_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   90 (323)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence            78999999999999998788999999997542 233467889999999999999999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.27  E-value=7.9e-12  Score=110.06  Aligned_cols=77  Identities=27%  Similarity=0.488  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++....     .+..||+|.++.. .....+.|.+|+.++.+++|+||++++++|...+..+|||||+
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  132 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM  132 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecC
Confidence            789999999999999863     3478999999765 4455678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       133 ~~~  135 (343)
T 1luf_A          133 AYG  135 (343)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.27  E-value=3.4e-12  Score=116.25  Aligned_cols=92  Identities=22%  Similarity=0.238  Sum_probs=77.0

Q ss_pred             ccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeE
Q 045713          183 RFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGY  257 (274)
Q Consensus       183 ~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~  257 (274)
                      .+.++++.....+|.  ++||+|+||.||++.....|..||+|+++...   ......+.+|..++.+++|+||++++++
T Consensus        50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            345566666667776  79999999999999998889999999997532   1223458899999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCC
Q 045713          258 CRRKQELLLVYNYMHNK  274 (274)
Q Consensus       258 ~~~~~~~~LV~Ey~~~G  274 (274)
                      |...+.++||||||++|
T Consensus       130 ~~~~~~~~lVmE~~~gg  146 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGG  146 (412)
T ss_dssp             EECSSEEEEEECCCCSC
T ss_pred             EeeCCEEEEEEcCCCCC
Confidence            99999999999999886

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.27  E-value=1.8e-11  Score=105.41  Aligned_cols=77  Identities=25%  Similarity=0.378  Sum_probs=69.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+... .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  105 (285)
T 3is5_A           28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG  105 (285)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred             ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence            7899999999999999888899999999765 2334678999999999999999999999999999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.26  E-value=2.3e-12  Score=120.01  Aligned_cols=76  Identities=34%  Similarity=0.647  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....+..||||.++.... ..++|.+|+.+|.+++|+||++++|+|...+.++||||||++|
T Consensus       226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g  301 (495)
T 1opk_A          226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG  301 (495)
T ss_dssp             EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence            789999999999999987789999999976532 3678999999999999999999999999999999999999876

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.26  E-value=2.1e-11  Score=109.63  Aligned_cols=77  Identities=22%  Similarity=0.317  Sum_probs=70.1

Q ss_pred             ceeeec--cCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKG--GFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G--~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|  +||.||++.....+..||||++...  .....+.+.+|+.++.+++|+|||+++++|...+.++||||||++
T Consensus        31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  110 (389)
T 3gni_B           31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY  110 (389)
T ss_dssp             EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence            789999  9999999999888999999999754  345567788999999999999999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       111 ~  111 (389)
T 3gni_B          111 G  111 (389)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.26  E-value=6.1e-12  Score=111.57  Aligned_cols=88  Identities=20%  Similarity=0.374  Sum_probs=70.9

Q ss_pred             hhHHHhhcCcc--ceeeeccCceEEEEEE-----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeE
Q 045713          187 KDLYKATKGFK--ELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGY  257 (274)
Q Consensus       187 ~el~~at~~f~--~~lG~G~fG~Vy~g~~-----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~  257 (274)
                      .+......+|.  +.||+|+||.||++..     ...+..||||+++.. .....+.|.+|+.++.++ +|+||++++++
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~   94 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   94 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence            33334444554  7899999999999984     334588999999865 445567899999999999 79999999999


Q ss_pred             EEeCCe-EEEEEeccCCC
Q 045713          258 CRRKQE-LLLVYNYMHNK  274 (274)
Q Consensus       258 ~~~~~~-~~LV~Ey~~~G  274 (274)
                      |...+. +++||||+++|
T Consensus        95 ~~~~~~~~~iv~e~~~~g  112 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFG  112 (359)
T ss_dssp             ECSTTSCCEEEEECCTTE
T ss_pred             eecCCCceEEEEEecCCC
Confidence            987654 89999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.26  E-value=1.3e-11  Score=109.51  Aligned_cols=77  Identities=26%  Similarity=0.331  Sum_probs=68.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.++..   .......+.+|+.++.+++||||+++++++...+.++|||||+++|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg   90 (337)
T 1o6l_A           11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   90 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            7899999999999999888999999999753   1233567899999999999999999999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.26  E-value=2.4e-11  Score=108.06  Aligned_cols=77  Identities=21%  Similarity=0.253  Sum_probs=70.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+... .....+.+.+|+.++.+++|+||++++++|...+..+|||||+++|
T Consensus        39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  116 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG  116 (360)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence            7899999999999999888899999999865 4555678999999999999999999999999999999999999875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.25  E-value=2.7e-11  Score=106.40  Aligned_cols=76  Identities=25%  Similarity=0.383  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..+|+|.+.... .....+.+|+.++.+++||||+++++++...+.+++||||+++|
T Consensus        11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~   86 (321)
T 1tki_A           11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence            78999999999999998888999999997543 34567899999999999999999999999999999999999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.25  E-value=2.3e-11  Score=105.69  Aligned_cols=77  Identities=34%  Similarity=0.484  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.+...  .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (311)
T 4agu_A            9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT   87 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence            7899999999999999888999999998654  3344677899999999999999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.25  E-value=2.9e-11  Score=103.63  Aligned_cols=77  Identities=30%  Similarity=0.414  Sum_probs=69.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...  .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   90 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG   90 (284)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence            7899999999999999888999999999754  4455678899999999999999999999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.25  E-value=1.1e-11  Score=106.94  Aligned_cols=78  Identities=32%  Similarity=0.593  Sum_probs=68.3

Q ss_pred             cceeeeccCceEEEEEE----cCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVL----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~----~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      .+.||+|+||.||++.+    ...+..||||++........+.|.+|+.++.+++|+||++++++|...  ..+++||||
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   94 (295)
T 3ugc_A           15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY   94 (295)
T ss_dssp             EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred             hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence            37899999999999984    345789999999877777778899999999999999999999999654  458999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        95 ~~~~   98 (295)
T 3ugc_A           95 LPYG   98 (295)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9876

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.25  E-value=2.2e-11  Score=105.33  Aligned_cols=77  Identities=23%  Similarity=0.330  Sum_probs=63.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--------------------------HhHHHHHHHHHHhcCCCCCCc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--------------------------QWMKEFVSEIVSMGALRHRNL  251 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--------------------------~~~~~f~~E~~~l~~l~H~Nl  251 (274)
                      +.||+|+||.||++.....+..||+|.+.....                          ...+.+.+|+.++.+++|+||
T Consensus        19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   98 (298)
T 2zv2_A           19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV   98 (298)
T ss_dssp             EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence            789999999999999988889999999965421                          113568999999999999999


Q ss_pred             cceeeEEEe--CCeEEEEEeccCCC
Q 045713          252 VQLHGYCRR--KQELLLVYNYMHNK  274 (274)
Q Consensus       252 v~l~g~~~~--~~~~~LV~Ey~~~G  274 (274)
                      +++++++..  .+..++||||+++|
T Consensus        99 v~~~~~~~~~~~~~~~lv~e~~~~~  123 (298)
T 2zv2_A           99 VKLVEVLDDPNEDHLYMVFELVNQG  123 (298)
T ss_dssp             CCEEEEEECSSSSEEEEEEECCTTC
T ss_pred             CeEEEEEEcCCCCEEEEEEecCCCC
Confidence            999999986  56789999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.24  E-value=1.7e-11  Score=105.98  Aligned_cols=77  Identities=27%  Similarity=0.447  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+........+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  101 (302)
T 2j7t_A           25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG  101 (302)
T ss_dssp             EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTE
T ss_pred             ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCC
Confidence            78999999999999998888999999997665556778999999999999999999999999999999999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.24  E-value=2.1e-11  Score=106.63  Aligned_cols=77  Identities=19%  Similarity=0.339  Sum_probs=67.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--eEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--ELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+.... ....+.+.+|+.++.+++|+||+++++++...+  ..+|||||+++|
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~   94 (319)
T 4euu_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (319)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence            78999999999999998888999999997542 234567889999999999999999999998765  779999999875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.24  E-value=1.6e-11  Score=106.94  Aligned_cols=77  Identities=19%  Similarity=0.336  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC-CCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+..........+.+|+.++.+ ++|+||+++++++...+..++||||+++|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   96 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG   96 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCC
Confidence            579999999999999877789999999976654556789999999988 47999999999999999999999999875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.24  E-value=8.9e-12  Score=111.55  Aligned_cols=78  Identities=29%  Similarity=0.462  Sum_probs=67.8

Q ss_pred             cceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      .+.||+|+||.||+|...     ..+..||||.++.. ......++.+|+.++.+++|+||++++++|...+..+|||||
T Consensus        76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~  155 (367)
T 3l9p_A           76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL  155 (367)
T ss_dssp             EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence            378999999999999954     34578999999755 455667899999999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       156 ~~~g  159 (367)
T 3l9p_A          156 MAGG  159 (367)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.24  E-value=1.6e-11  Score=104.12  Aligned_cols=75  Identities=21%  Similarity=0.361  Sum_probs=67.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++...  +..+|+|.+...  .....+.|.+|+.++.+++|+||++++++|...  +..++||||+++
T Consensus        16 ~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   93 (271)
T 3kmu_A           16 TKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY   93 (271)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred             HHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence            78999999999999986  789999999765  445567899999999999999999999999876  678999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        94 ~   94 (271)
T 3kmu_A           94 G   94 (271)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.23  E-value=2.6e-11  Score=106.62  Aligned_cols=77  Identities=23%  Similarity=0.372  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....|..||+|.+.....      ...+.+.+|+.++.+++||||++++++|...+..++||||+
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   96 (326)
T 2y0a_A           17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELV   96 (326)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcC
Confidence            789999999999999988899999999975421      13578999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        97 ~~~   99 (326)
T 2y0a_A           97 AGG   99 (326)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.23  E-value=2.5e-11  Score=111.61  Aligned_cols=73  Identities=41%  Similarity=0.587  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-eEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-ELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|...  +..||||.++...  ..+.|.+|+.+|.+++|+||++++|+|...+ .++||||||++|
T Consensus       199 ~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g  272 (450)
T 1k9a_A          199 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  272 (450)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred             eeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence            78999999999999986  6799999997653  3568999999999999999999999998765 789999999886

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.23  E-value=3.2e-11  Score=104.61  Aligned_cols=77  Identities=22%  Similarity=0.349  Sum_probs=66.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.+..........+.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   91 (304)
T 2jam_A           15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG   91 (304)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCc
Confidence            78999999999999998788999999998664444567899999999999999999999999999999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.23  E-value=2.2e-11  Score=107.04  Aligned_cols=77  Identities=17%  Similarity=0.336  Sum_probs=68.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||+|.++...   ....+.+.+|..++..++||||+++++++...+.+++||||+++|
T Consensus        12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg   91 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG   91 (318)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence            78999999999999998889999999997541   123567889999999999999999999999999999999999876

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.23  E-value=5.7e-11  Score=102.45  Aligned_cols=77  Identities=21%  Similarity=0.372  Sum_probs=69.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  100 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR  100 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence            7899999999999999888899999998654   3455678999999999999999999999999999999999999865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.22  E-value=2.5e-11  Score=107.90  Aligned_cols=76  Identities=30%  Similarity=0.447  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||||++...   .....+++.+|+.++.+++|+||++++++|...+..+|||||+++
T Consensus        60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g  138 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG  138 (348)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC
Confidence            6899999999999998777899999999754   233456899999999999999999999999999999999999963

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.22  E-value=2e-11  Score=108.58  Aligned_cols=75  Identities=23%  Similarity=0.284  Sum_probs=61.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+....  ..+.+.+|+.++.+++|+||++++++|...+..+|||||+++|
T Consensus        59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  133 (349)
T 2w4o_A           59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG  133 (349)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCC
Confidence            78999999999999998878999999997642  3457889999999999999999999999999999999999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.22  E-value=3.5e-11  Score=106.91  Aligned_cols=77  Identities=22%  Similarity=0.341  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|..++.++ +||||+++++++...+.++|||||+++
T Consensus        15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g   94 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   94 (345)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence            7899999999999999888899999999754   344566788999999887 899999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        95 g   95 (345)
T 3a8x_A           95 G   95 (345)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.22  E-value=1.3e-11  Score=110.60  Aligned_cols=77  Identities=27%  Similarity=0.546  Sum_probs=67.2

Q ss_pred             ceeeeccCceEEEEEEc-------CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLS-------TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~-------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.||+|+||.||++...       ..+..||||.++.. .....+++.+|+.+|.++ +|+||++++++|...+.+++||
T Consensus        87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~  166 (370)
T 2psq_A           87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  166 (370)
T ss_dssp             EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEE
Confidence            78999999999999863       23467999999765 345567899999999999 8999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus       167 e~~~~g  172 (370)
T 2psq_A          167 EYASKG  172 (370)
T ss_dssp             ECCTTC
T ss_pred             EcCCCC
Confidence            999876

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.22  E-value=2e-11  Score=106.91  Aligned_cols=76  Identities=36%  Similarity=0.590  Sum_probs=60.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.++... ....+.+.+|+.++.+++|+||+++++++...+..+|||||+++
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   87 (317)
T 2pmi_A           11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN   87 (317)
T ss_dssp             --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCC
T ss_pred             eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCC
Confidence            78999999999999988788999999997553 23346788999999999999999999999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.21  E-value=3.2e-11  Score=107.39  Aligned_cols=77  Identities=22%  Similarity=0.304  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.+....   ....+.+.+|+.++.+++||||+++++++...+.++|||||+++|
T Consensus        47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg  126 (350)
T 1rdq_E           47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG  126 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCC
Confidence            78999999999999998889999999996542   223567899999999999999999999999999999999999876

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.21  E-value=1.9e-11  Score=110.26  Aligned_cols=77  Identities=23%  Similarity=0.331  Sum_probs=68.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+....   ....+.+.+|+.+|.+++|||||+++++|...+.+++||||+++|
T Consensus        21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg  100 (384)
T 4fr4_A           21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG  100 (384)
T ss_dssp             EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence            78999999999999998888999999996531   233567899999999999999999999999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.21  E-value=3.8e-11  Score=104.28  Aligned_cols=77  Identities=27%  Similarity=0.497  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++...     ..+..||+|.+... .....+.+.+|+.++.+++|+||++++++|...+..++||||+
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  108 (314)
T 2ivs_A           29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYA  108 (314)
T ss_dssp             EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeec
Confidence            78999999999999872     34578999999765 4555678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       109 ~~~  111 (314)
T 2ivs_A          109 KYG  111 (314)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.21  E-value=2.9e-11  Score=103.48  Aligned_cols=77  Identities=26%  Similarity=0.409  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+....   ......+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   94 (279)
T 3fdn_A           15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG   94 (279)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence            78999999999999998888999999996532   223567899999999999999999999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.21  E-value=3.5e-11  Score=111.81  Aligned_cols=77  Identities=21%  Similarity=0.339  Sum_probs=65.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+....  ......+.+|+.++.+++||||++++++|...+..+||||||++|
T Consensus        43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g  121 (494)
T 3lij_A           43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG  121 (494)
T ss_dssp             EEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence            78999999999999998888999999997542  333567899999999999999999999999999999999999876

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.21  E-value=3.1e-11  Score=110.96  Aligned_cols=77  Identities=23%  Similarity=0.324  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..+|+|.+....  ....+.+.+|+.++.+++||||+++++++...+..+||||||++|
T Consensus        17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg   95 (444)
T 3soa_A           17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG   95 (444)
T ss_dssp             EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence            78999999999999998889999999997652  344667999999999999999999999999999999999999876

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.21  E-value=5.9e-11  Score=101.38  Aligned_cols=77  Identities=23%  Similarity=0.372  Sum_probs=69.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...  ......++.+|+..+.++ +|+||++++++|...+..++||||+++|
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   96 (289)
T 1x8b_A           17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG   96 (289)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCC
Confidence            7899999999999999877899999999764  334567889999999998 9999999999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.21  E-value=1.6e-11  Score=112.60  Aligned_cols=77  Identities=25%  Similarity=0.320  Sum_probs=60.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.+...   .......+.+|+.++.+++|+||++++++|...+.++||||||++|
T Consensus       154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~  233 (446)
T 4ejn_A          154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG  233 (446)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSC
T ss_pred             EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCC
Confidence            7899999999999999888999999999753   3334567889999999999999999999999999999999999876

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.21  E-value=6.7e-11  Score=104.26  Aligned_cols=77  Identities=21%  Similarity=0.372  Sum_probs=69.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  126 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR  126 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence            7899999999999999888899999998754   3455678999999999999999999999999999999999999865

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.21  E-value=4.3e-11  Score=101.88  Aligned_cols=75  Identities=32%  Similarity=0.490  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..||+|.+..... ..+++.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        16 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   90 (269)
T 4hcu_A           16 QEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   90 (269)
T ss_dssp             EEEEECSSCEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             heecCCCccEEEEEEecC-CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence            789999999999999864 67899999976532 2467999999999999999999999999999999999999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.21  E-value=1.8e-11  Score=112.71  Aligned_cols=74  Identities=27%  Similarity=0.501  Sum_probs=65.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.... +..||||.++... ...++|.+|+.+|.+++|+||++++++|. .+.++||||||++|
T Consensus       194 ~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g  267 (454)
T 1qcf_A          194 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKG  267 (454)
T ss_dssp             EEEECCSSEEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             EEcccCCceEEEEEEECC-ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence            789999999999999864 6889999997653 34678999999999999999999999986 67789999999886

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.21  E-value=8.1e-11  Score=101.26  Aligned_cols=77  Identities=25%  Similarity=0.386  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey~  271 (274)
                      ..||+|+||.||+|.....+..||+|.+...  .....+.+.+|+.++.+++|+||++++++|..    ...+++||||+
T Consensus        32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~  111 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM  111 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred             eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence            5799999999999999888899999999754  45567789999999999999999999999875    34589999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       112 ~~~  114 (290)
T 1t4h_A          112 TSG  114 (290)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.21  E-value=8.3e-11  Score=102.17  Aligned_cols=77  Identities=25%  Similarity=0.403  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||+|.+...   .......+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  117 (310)
T 2wqm_A           38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG  117 (310)
T ss_dssp             EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSC
T ss_pred             EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCC
Confidence            7899999999999998777899999999753   3455678999999999999999999999999999999999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.21  E-value=1.7e-11  Score=107.14  Aligned_cols=87  Identities=25%  Similarity=0.404  Sum_probs=71.8

Q ss_pred             hHHHhhcCcc--ceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEE
Q 045713          188 DLYKATKGFK--ELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCR  259 (274)
Q Consensus       188 el~~at~~f~--~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~  259 (274)
                      +......+|.  +.||+|+||.||+|...     ..+..||+|.+... .......|.+|+.++.+++|+||++++++|.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   98 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   98 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence            3334444454  78999999999999865     23578999999765 4455678999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCC
Q 045713          260 RKQELLLVYNYMHNK  274 (274)
Q Consensus       260 ~~~~~~LV~Ey~~~G  274 (274)
                      ..+..++||||+++|
T Consensus        99 ~~~~~~lv~e~~~~~  113 (322)
T 1p4o_A           99 QGQPTLVIMELMTRG  113 (322)
T ss_dssp             SSSSCEEEEECCTTC
T ss_pred             cCCccEEEEEeCCCC
Confidence            989999999999875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.21  E-value=3e-11  Score=107.92  Aligned_cols=76  Identities=24%  Similarity=0.298  Sum_probs=68.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+..... ..+.+.+|+.++.+++|+||+++++++...+.++|||||+++|
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~  101 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG  101 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCC
Confidence            789999999999999988899999999976432 2356889999999999999999999999999999999999876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.20  E-value=1.4e-11  Score=105.76  Aligned_cols=76  Identities=34%  Similarity=0.652  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+.... ...+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   94 (288)
T 3kfa_A           19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   94 (288)
T ss_dssp             EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred             eecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCC
Confidence            78999999999999998778999999997643 34678999999999999999999999999999999999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.20  E-value=3.6e-11  Score=107.25  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=67.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.++..   .....+.+.+|..++..+ +|+||+++++++...+.++||||||++
T Consensus        29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g  108 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG  108 (353)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence            7899999999999999888999999999754   223356688999999887 799999999999999999999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       109 g  109 (353)
T 3txo_A          109 G  109 (353)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.20  E-value=8.2e-11  Score=100.24  Aligned_cols=77  Identities=23%  Similarity=0.334  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+... .....+.+.+|+.++.+++|+||+++++++...+..++|+||+++|
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   90 (276)
T 2yex_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   90 (276)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence            7899999999999999877899999999754 3344678999999999999999999999999999999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.20  E-value=5.2e-11  Score=103.74  Aligned_cols=77  Identities=27%  Similarity=0.346  Sum_probs=67.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.+........+.+.+|+.++.+++|+||++++++|..    ....++|+||+++
T Consensus        35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  114 (317)
T 2buj_A           35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR  114 (317)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred             EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence            789999999999999877789999999977766777889999999999999999999999973    3468999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       115 ~  115 (317)
T 2buj_A          115 G  115 (317)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.19  E-value=6.6e-11  Score=110.25  Aligned_cols=77  Identities=22%  Similarity=0.347  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-------------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-------------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQEL  264 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~  264 (274)
                      +.||+|+||.||++.....+..+|+|.+.....             ...+.+.+|+.+|.+++||||++++++|...+..
T Consensus        42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  121 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF  121 (504)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            789999999999999988889999999975421             2356799999999999999999999999999999


Q ss_pred             EEEEeccCCC
Q 045713          265 LLVYNYMHNK  274 (274)
Q Consensus       265 ~LV~Ey~~~G  274 (274)
                      +||||||++|
T Consensus       122 ~lv~e~~~gg  131 (504)
T 3q5i_A          122 YLVTEFYEGG  131 (504)
T ss_dssp             EEEEECCTTC
T ss_pred             EEEEecCCCC
Confidence            9999999876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.19  E-value=9.9e-11  Score=101.97  Aligned_cols=77  Identities=21%  Similarity=0.396  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...   .....+.+.+|+.++.+++|+||+++++++...+..++|+||+++|
T Consensus        40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  119 (309)
T 2h34_A           40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV  119 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred             EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence            7899999999999999877899999999754   3344578999999999999999999999999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.19  E-value=4.8e-11  Score=104.93  Aligned_cols=74  Identities=27%  Similarity=0.349  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+...   ....+.+|+.++.+++ |+||++++++|...+..+|||||+++|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            6799999999999999888899999999653   3457788999999996 999999999999999999999999876

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.19  E-value=8.2e-11  Score=100.48  Aligned_cols=77  Identities=23%  Similarity=0.327  Sum_probs=67.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....++..||+|.+...  .....+.+.+|+.++.+++|+||++++++|..  .+..++||||+++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   91 (279)
T 2w5a_A           12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG   91 (279)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred             hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence            7899999999999999888899999999754  44556789999999999999999999998864  5678999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        92 ~   92 (279)
T 2w5a_A           92 G   92 (279)
T ss_dssp             E
T ss_pred             C
Confidence            4

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.19  E-value=3.1e-11  Score=105.23  Aligned_cols=77  Identities=22%  Similarity=0.300  Sum_probs=66.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe----EEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE----LLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~----~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..||+|.+...   .......|.+|+.++.+++|+||+++++++.....    .+|||||
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~   97 (311)
T 3ork_A           18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY   97 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence            7899999999999998778899999999765   33445689999999999999999999999876543    4999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        98 ~~g~  101 (311)
T 3ork_A           98 VDGV  101 (311)
T ss_dssp             CCEE
T ss_pred             CCCC
Confidence            9864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.19  E-value=4e-11  Score=105.41  Aligned_cols=77  Identities=31%  Similarity=0.524  Sum_probs=68.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...  .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  109 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT  109 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence            6899999999999999888899999998654  3444667889999999999999999999999999999999999753

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=5.8e-11  Score=104.66  Aligned_cols=77  Identities=35%  Similarity=0.716  Sum_probs=66.3

Q ss_pred             ceeeeccCceEEEEEEcCCC----ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+    ..||+|.+... ......+|.+|+.++.+++|+||++++++|...+..+|||||++
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  129 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME  129 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence            78999999999999875432    45999999765 44556789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       130 ~~  131 (333)
T 1mqb_A          130 NG  131 (333)
T ss_dssp             TE
T ss_pred             CC
Confidence            75

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.19  E-value=4e-11  Score=108.33  Aligned_cols=77  Identities=19%  Similarity=0.339  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--eEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--ELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+.... ....+.+.+|+.++.+++|+||+++++++...+  ..+|||||+++|
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g   94 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence            78999999999999998888999999997542 233567889999999999999999999998765  679999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.19  E-value=9e-11  Score=102.89  Aligned_cols=77  Identities=30%  Similarity=0.470  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEE----cCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVL----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~----~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.+    ...+..||||++........+.+.+|+.++.+++|+||+++++++..  .+..+|||||+
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~  108 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL  108 (327)
T ss_dssp             EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECC
T ss_pred             hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeec
Confidence            7899999999999985    44578999999988777777889999999999999999999999874  45689999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       109 ~~~  111 (327)
T 3lxl_A          109 PSG  111 (327)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.18  E-value=7.6e-11  Score=100.90  Aligned_cols=77  Identities=25%  Similarity=0.346  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..+|+|.+.....      ...+.+.+|+.++.+++|+||++++++|...+..++||||+
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   90 (283)
T 3bhy_A           11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELV   90 (283)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeec
Confidence            789999999999999987889999999975421      13678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        91 ~~~   93 (283)
T 3bhy_A           91 SGG   93 (283)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            865

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.18  E-value=4.5e-11  Score=102.16  Aligned_cols=77  Identities=27%  Similarity=0.489  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+....   ....+.+.+|+.++.+++|+||+++++++...+..++|+||+++|
T Consensus        17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   96 (278)
T 3cok_A           17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG   96 (278)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence            78999999999999987778999999996532   122467899999999999999999999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.18  E-value=7.6e-11  Score=102.09  Aligned_cols=77  Identities=25%  Similarity=0.457  Sum_probs=69.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....+..||+|.+... .....+.+.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  105 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG  105 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence            7899999999999998877899999999755 2344678999999999999999999999999999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.18  E-value=4.5e-11  Score=105.16  Aligned_cols=76  Identities=26%  Similarity=0.541  Sum_probs=64.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.++...  ....+.+.+|+.++.+++|+||+++++++...+..+|||||+++
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  117 (329)
T 3gbz_A           40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN  117 (329)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC
Confidence            78999999999999988889999999997553  23356788999999999999999999999999999999999873

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.18  E-value=3.2e-11  Score=105.41  Aligned_cols=83  Identities=25%  Similarity=0.475  Sum_probs=61.0

Q ss_pred             hhcCcc--ceeeeccCceEEEEEEcCCCc---eEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeE
Q 045713          192 ATKGFK--ELIGKGGFGKVYKGVLSTSGL---PIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQEL  264 (274)
Q Consensus       192 at~~f~--~~lG~G~fG~Vy~g~~~~~g~---~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~  264 (274)
                      ...+|.  +.||+|+||.||++.....+.   .||||.++..  .....+.|.+|+.++.+++|+||+++++++...+..
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            334454  799999999999999865443   7999999764  344567899999999999999999999999877655


Q ss_pred             ------EEEEeccCCC
Q 045713          265 ------LLVYNYMHNK  274 (274)
Q Consensus       265 ------~LV~Ey~~~G  274 (274)
                            ++|+||+++|
T Consensus       101 ~~~~~~~~v~e~~~~~  116 (323)
T 3qup_A          101 GRLPIPMVILPFMKHG  116 (323)
T ss_dssp             ----CEEEEEECCTTC
T ss_pred             cCCCccEEEEEeccCC
Confidence                  9999999876

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.18  E-value=4.8e-11  Score=113.99  Aligned_cols=75  Identities=27%  Similarity=0.454  Sum_probs=64.9

Q ss_pred             eeeeccCceEEEEEEc--CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVLS--TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~--~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||+|.+.  ..+..||||.++.. .....++|.+|+.+|.+++|+|||+++|+|.. +.++||||||++|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g  420 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG  420 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence            7999999999999875  33567999999765 33457789999999999999999999999975 6689999999986

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.18  E-value=6.1e-11  Score=103.95  Aligned_cols=74  Identities=26%  Similarity=0.376  Sum_probs=63.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC----eEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ----ELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~----~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|...  +..||||++.... .....+.+|+.++.+++|+||++++++|....    .++|||||+++
T Consensus        30 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~  106 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK  106 (322)
T ss_dssp             EEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             heecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence            78999999999999886  6899999997543 33455677999999999999999999998754    47999999988


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       107 g  107 (322)
T 3soc_A          107 G  107 (322)
T ss_dssp             C
T ss_pred             C
Confidence            6

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.18  E-value=3e-11  Score=109.46  Aligned_cols=77  Identities=21%  Similarity=0.339  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..+|+|.++..   .......+.+|..++.++ +||||+++++++...+.++|||||+++
T Consensus        58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~g  137 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG  137 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCC
Confidence            7999999999999999888899999999754   223345678899998876 899999999999999999999999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       138 g  138 (396)
T 4dc2_A          138 G  138 (396)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.18  E-value=4e-11  Score=106.24  Aligned_cols=75  Identities=25%  Similarity=0.380  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....+..||+|.+....   ......+.+|+.++..++||||++++++|...+..++||||+.
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~   92 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG   92 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECCC
Confidence            78999999999999998788999999996431   1223578999999999999999999999999999999999984

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.18  E-value=7.3e-11  Score=103.30  Aligned_cols=77  Identities=23%  Similarity=0.361  Sum_probs=68.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....|..||+|.+.....      ...+++.+|+.++.+++|+||+++++++...+..++||||+
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   97 (321)
T 2a2a_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV   97 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcC
Confidence            789999999999999988889999999975421      13678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        98 ~~~  100 (321)
T 2a2a_A           98 SGG  100 (321)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.17  E-value=3.5e-11  Score=102.33  Aligned_cols=75  Identities=32%  Similarity=0.484  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..||+|.+..... ..+++.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        14 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (268)
T 3sxs_A           14 KELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG   88 (268)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             eeeccCCCceEEEEEecC-ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCC
Confidence            789999999999998874 67899999976532 3467999999999999999999999999999999999999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.17  E-value=4.7e-11  Score=105.07  Aligned_cols=77  Identities=22%  Similarity=0.345  Sum_probs=61.4

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccCC----HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHDS----EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++...   ..+..+|+|.++...    ......+.+|+.+|.+++|+||+++++++...+.++|||||
T Consensus        23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  102 (327)
T 3a62_A           23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY  102 (327)
T ss_dssp             EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence            78999999999999874   467899999997642    23345688999999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       103 ~~~~  106 (327)
T 3a62_A          103 LSGG  106 (327)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9865

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.17  E-value=4.5e-11  Score=104.38  Aligned_cols=75  Identities=33%  Similarity=0.503  Sum_probs=64.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.... +..||+|++...  .......+.+|+.++.+++|+||+++++++...+..+|||||+++
T Consensus        27 ~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  103 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK  103 (311)
T ss_dssp             EEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE
T ss_pred             hhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC
Confidence            789999999999999864 899999999754  223356789999999999999999999999999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.17  E-value=8.1e-11  Score=108.97  Aligned_cols=77  Identities=26%  Similarity=0.346  Sum_probs=69.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+....   ......+.+|+.++.+++||||++++++|...+..++|+||+++|
T Consensus        32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~  111 (484)
T 3nyv_A           32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG  111 (484)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence            78999999999999998889999999996541   334678999999999999999999999999999999999999876

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.17  E-value=4e-11  Score=105.23  Aligned_cols=77  Identities=30%  Similarity=0.490  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEEcCCC-----ceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSG-----LPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+     ..||+|.+... .....+.+.+|+.++.++ +|+||++++++|...+..++||||
T Consensus        52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~  131 (333)
T 2i1m_A           52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY  131 (333)
T ss_dssp             EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEec
Confidence            78999999999999986444     47999999765 345567899999999999 899999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       132 ~~~g  135 (333)
T 2i1m_A          132 CCYG  135 (333)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9875

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.17  E-value=4.2e-11  Score=106.47  Aligned_cols=81  Identities=22%  Similarity=0.407  Sum_probs=68.9

Q ss_pred             cCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEE
Q 045713          194 KGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       194 ~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      .+|.  +.||+|+||.||++.....+..||+|.++...   ......+..|..++..+ +||||+++++++...+.++||
T Consensus        17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv   96 (345)
T 1xjd_A           17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   96 (345)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence            3444  79999999999999998889999999997531   22345678899888876 899999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      |||+++|
T Consensus        97 ~E~~~gg  103 (345)
T 1xjd_A           97 MEYLNGG  103 (345)
T ss_dssp             EECCTTC
T ss_pred             EeCCCCC
Confidence            9999886

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.17  E-value=5.5e-11  Score=110.25  Aligned_cols=77  Identities=23%  Similarity=0.427  Sum_probs=68.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.....|..||||.+....   ......+.+|+.++..++|+||+++++++...+.++|||||+++|
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg  101 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG  101 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            78999999999999998789999999996542   123467899999999999999999999999999999999999875

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.17  E-value=1.1e-10  Score=100.75  Aligned_cols=77  Identities=21%  Similarity=0.324  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---------HHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---------EQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      +.||+|+||.||++.....+..||+|.+....         ....+.+.+|+.++.+++ |+||+++++++...+..++|
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv  102 (298)
T 1phk_A           23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV  102 (298)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence            78999999999999998888999999997542         123567889999999995 99999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      |||+++|
T Consensus       103 ~e~~~~~  109 (298)
T 1phk_A          103 FDLMKKG  109 (298)
T ss_dssp             EECCTTC
T ss_pred             EeccCCC
Confidence            9999875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.16  E-value=2.3e-11  Score=106.71  Aligned_cols=77  Identities=29%  Similarity=0.469  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEE-----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~-----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++..     ...+..||||.+... ......++.+|+.++.+++|+||+++++++...+..+|||||+
T Consensus        36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  115 (327)
T 2yfx_A           36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM  115 (327)
T ss_dssp             EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecC
Confidence            7899999999999984     335678999999754 4556678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       116 ~~~  118 (327)
T 2yfx_A          116 AGG  118 (327)
T ss_dssp             TTE
T ss_pred             CCC
Confidence            864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.16  E-value=9.2e-11  Score=100.01  Aligned_cols=77  Identities=23%  Similarity=0.421  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+....   ....+.+.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   96 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG   96 (276)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence            78999999999999998778999999996542   123567899999999999999999999999999999999999865

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.16  E-value=5.1e-11  Score=110.45  Aligned_cols=77  Identities=22%  Similarity=0.303  Sum_probs=68.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||||.+...  .......+.+|+.++.+++||||++++++|...+.+++|+||+++|
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~  106 (486)
T 3mwu_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG  106 (486)
T ss_dssp             EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence            7899999999999999878899999999643  2233568999999999999999999999999999999999999876

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.16  E-value=1.2e-10  Score=100.17  Aligned_cols=77  Identities=22%  Similarity=0.303  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...  .......+.+|+.++.+++|+||+++++++...+..++|+||+++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  106 (287)
T 2wei_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG  106 (287)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence            7899999999999999877899999999654  2334678999999999999999999999999999999999999865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.16  E-value=4.8e-11  Score=112.85  Aligned_cols=77  Identities=26%  Similarity=0.340  Sum_probs=68.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||.||++.....|..||+|.+....   ......+.+|+.+|.+++|+|||++++++...+.++||||||++|
T Consensus       190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg  269 (576)
T 2acx_A          190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG  269 (576)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence            78999999999999998889999999996531   223567889999999999999999999999999999999999886

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.16  E-value=6.9e-11  Score=107.69  Aligned_cols=76  Identities=17%  Similarity=0.308  Sum_probs=63.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||.+....        ......+.+|+.+|.+++|+||+++++++. .+..+||||
T Consensus       141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e  219 (419)
T 3i6u_A          141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLE  219 (419)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEE
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEE
Confidence            78999999999999998888999999996431        112235889999999999999999999985 566899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus       220 ~~~~g  224 (419)
T 3i6u_A          220 LMEGG  224 (419)
T ss_dssp             CCTTC
T ss_pred             cCCCC
Confidence            99876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.16  E-value=5.7e-11  Score=113.87  Aligned_cols=76  Identities=25%  Similarity=0.416  Sum_probs=64.6

Q ss_pred             ceeeeccCceEEEEEEc--CCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLS--TSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~--~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.+.  ..+..||||+++..  .....++|.+|+.+|.+++|+|||+++++|. .+..+||||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            47999999999999663  34578999999764  3345688999999999999999999999996 5568999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       454 g  454 (635)
T 4fl3_A          454 G  454 (635)
T ss_dssp             E
T ss_pred             C
Confidence            5

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.16  E-value=6.8e-11  Score=101.81  Aligned_cols=75  Identities=33%  Similarity=0.508  Sum_probs=65.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++... .+..+|+|.+.....  ...+.+.+|+.++.+++|+||+++++++...+..++||||+++
T Consensus         8 ~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (288)
T 1ob3_A            8 EKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ   84 (288)
T ss_dssp             EEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred             hhcccCCCEEEEEEEcC-CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence            78999999999999984 578999999975432  2346788999999999999999999999999999999999863

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.15  E-value=6.6e-11  Score=101.39  Aligned_cols=75  Identities=33%  Similarity=0.531  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..||+|.+..... ..+++.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        30 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  104 (283)
T 3gen_A           30 KELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG  104 (283)
T ss_dssp             EECC---CEEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTC
T ss_pred             hhcCCCCCceEEEEEEcC-CCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCC
Confidence            789999999999998874 67899999976532 2467999999999999999999999999999999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.15  E-value=4.9e-11  Score=103.51  Aligned_cols=77  Identities=27%  Similarity=0.433  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEE-----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVL-----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~-----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++..     ...+..||+|.+... .....+.+.+|+.++.++ +|+||++++++|...+..++||||
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~  108 (313)
T 1t46_A           29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY  108 (313)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEec
Confidence            7899999999999985     234688999999765 344567899999999999 999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       109 ~~~~  112 (313)
T 1t46_A          109 CCYG  112 (313)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.15  E-value=6e-11  Score=100.90  Aligned_cols=75  Identities=36%  Similarity=0.639  Sum_probs=61.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC----HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS----EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++...  +..+|||.+....    ....+.+.+|+.++.+++|+||++++++|...+..++||||+++
T Consensus        13 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG   90 (271)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred             eeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence            78999999999999986  7899999986542    23356799999999999999999999999999999999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        91 ~   91 (271)
T 3dtc_A           91 G   91 (271)
T ss_dssp             E
T ss_pred             C
Confidence            4

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.15  E-value=1.1e-10  Score=100.75  Aligned_cols=77  Identities=25%  Similarity=0.478  Sum_probs=63.8

Q ss_pred             ceeeeccCceEEEEEE----cCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVL----STSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~----~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.+    ...+..||+|.+... .....+.+.+|+.++.+++|+||++++++|...  ..+++||||
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~  106 (302)
T 4e5w_A           27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF  106 (302)
T ss_dssp             EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEEC
T ss_pred             hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEe
Confidence            7899999999999984    345789999999754 333457899999999999999999999999876  568999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       107 ~~~~  110 (302)
T 4e5w_A          107 LPSG  110 (302)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9875

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.15  E-value=7.3e-11  Score=101.27  Aligned_cols=77  Identities=23%  Similarity=0.413  Sum_probs=67.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+....   ....+.+.+|+.++.+++|+||+++++++...+..++|+||+++|
T Consensus        20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   99 (284)
T 2vgo_A           20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG   99 (284)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCC
Confidence            78999999999999998778999999996531   122467899999999999999999999999999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.15  E-value=1.8e-11  Score=108.26  Aligned_cols=77  Identities=19%  Similarity=0.288  Sum_probs=67.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH--------HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE--------QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||.+.....        .....+.+|+.++.+++|+||++++++|...+..++|||
T Consensus        30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e  109 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME  109 (335)
T ss_dssp             EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEE
Confidence            689999999999999888899999999976421        123467889999999999999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+.+|
T Consensus       110 ~~~~g  114 (335)
T 3dls_A          110 KHGSG  114 (335)
T ss_dssp             CCTTS
T ss_pred             eCCCC
Confidence            98765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.14  E-value=7.7e-11  Score=103.71  Aligned_cols=77  Identities=27%  Similarity=0.557  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEc-------CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLS-------TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~-------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.||+|+||.||++...       ..+..||+|.+... .....+.+.+|+.++.++ +|+||++++++|...+..++||
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  120 (334)
T 2pvf_A           41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  120 (334)
T ss_dssp             EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEE
T ss_pred             eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEE
Confidence            78999999999999874       24578999999765 445567899999999999 8999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus       121 e~~~~~  126 (334)
T 2pvf_A          121 EYASKG  126 (334)
T ss_dssp             ECCTTC
T ss_pred             ECCCCC
Confidence            999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.14  E-value=1.1e-10  Score=102.46  Aligned_cols=78  Identities=29%  Similarity=0.582  Sum_probs=65.4

Q ss_pred             cceeeeccCceEEEEEEcCCCce--EEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLP--IAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~--vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||++.....+..  +|+|.+... .....+.+.+|+.++.++ +|+||+++++++...+..+|||||++
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~  109 (327)
T 1fvr_A           30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP  109 (327)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence            37899999999999998766664  499999754 344466799999999999 89999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       110 ~~  111 (327)
T 1fvr_A          110 HG  111 (327)
T ss_dssp             TC
T ss_pred             CC
Confidence            75

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.14  E-value=6.7e-11  Score=106.29  Aligned_cols=77  Identities=26%  Similarity=0.507  Sum_probs=67.2

Q ss_pred             ceeeeccCceEEEEEEcC-------CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLST-------SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.||+|+||.||++....       .+..||||++... .....+.+.+|+.++.++ +|+||++++++|...+..+|||
T Consensus        75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~  154 (382)
T 3tt0_A           75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  154 (382)
T ss_dssp             EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEE
Confidence            789999999999998642       2357999999765 455567899999999999 9999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus       155 e~~~~g  160 (382)
T 3tt0_A          155 EYASKG  160 (382)
T ss_dssp             ECCTTC
T ss_pred             EecCCC
Confidence            999876

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.14  E-value=3.4e-11  Score=103.90  Aligned_cols=77  Identities=27%  Similarity=0.364  Sum_probs=52.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+.... ....+++.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   98 (303)
T 2vwi_A           21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG   98 (303)
T ss_dssp             EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred             heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence            78999999999999987678999999986542 334567899999999999999999999999999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.14  E-value=7.4e-11  Score=105.98  Aligned_cols=77  Identities=29%  Similarity=0.399  Sum_probs=58.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHH-hcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVS-MGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~-l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..+|+|.++..   .......+.+|..+ +..++|+||+++++++...+.++|||||+++
T Consensus        44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g  123 (373)
T 2r5t_A           44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING  123 (373)
T ss_dssp             EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCC
Confidence            7899999999999999888899999999754   22334567778776 5678999999999999999999999999988


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       124 g  124 (373)
T 2r5t_A          124 G  124 (373)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.14  E-value=1e-10  Score=101.20  Aligned_cols=77  Identities=29%  Similarity=0.372  Sum_probs=64.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC----HHhHHHHHHHHHHhcCCCCCCccceeeEEE--eCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS----EQWMKEFVSEIVSMGALRHRNLVQLHGYCR--RKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~--~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..+|+|.+....    ......+.+|+.++.+++|+||+++++++.  ..+..++||||+
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~   90 (305)
T 2wtk_C           11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC   90 (305)
T ss_dssp             CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence            78999999999999998788999999997542    234578999999999999999999999984  345789999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        91 ~~~   93 (305)
T 2wtk_C           91 VCG   93 (305)
T ss_dssp             SEE
T ss_pred             cCC
Confidence            864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.14  E-value=6.9e-11  Score=111.21  Aligned_cols=77  Identities=25%  Similarity=0.396  Sum_probs=68.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ++||+|+||.||++.....|..||+|.+....   ......+.+|+.++.+++|+||+++++++...+.++|||||+++|
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg  270 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG  270 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence            68999999999999998889999999996542   123567899999999999999999999999999999999999876

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.14  E-value=6.3e-11  Score=109.01  Aligned_cols=74  Identities=28%  Similarity=0.473  Sum_probs=64.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.... +..||||.++... ...++|.+|+.+|.+++|+||++++|+|.. +..+||||||++|
T Consensus       190 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~g  263 (452)
T 1fmk_A          190 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  263 (452)
T ss_dssp             EEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             eeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCC
Confidence            789999999999999975 5779999997653 235689999999999999999999999965 7789999999876

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.14  E-value=1.6e-10  Score=99.63  Aligned_cols=75  Identities=35%  Similarity=0.547  Sum_probs=64.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....+..||+|.+....  ......+.+|+.++.+++|+||+++++++...+..++||||++
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (299)
T 2r3i_A            9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   85 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence            78999999999999998788999999986542  2234678899999999999999999999999999999999986

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.14  E-value=1.5e-10  Score=99.75  Aligned_cols=77  Identities=31%  Similarity=0.473  Sum_probs=65.5

Q ss_pred             ceeeeccCceEEEEEEcCCC---ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeE-EEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQEL-LLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~-~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+   ..+|+|.+... .....+.|.+|+.++.+++|+||++++++|...+.. ++|+||+.
T Consensus        27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~  106 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMC  106 (298)
T ss_dssp             EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCT
T ss_pred             ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEeccc
Confidence            78999999999999875433   37999999765 445567899999999999999999999999876665 99999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       107 ~~  108 (298)
T 3pls_A          107 HG  108 (298)
T ss_dssp             TC
T ss_pred             CC
Confidence            75

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.13  E-value=2.1e-10  Score=98.73  Aligned_cols=76  Identities=28%  Similarity=0.458  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-------------CCeE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-------------KQEL  264 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-------------~~~~  264 (274)
                      +.||+|+||.||++....++..||+|.+... ....+.+.+|+.++.+++|+||++++++|..             .+..
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (303)
T 1zy4_A           12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL   90 (303)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred             heeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence            7899999999999998877899999999653 3446789999999999999999999999865             3467


Q ss_pred             EEEEeccCCC
Q 045713          265 LLVYNYMHNK  274 (274)
Q Consensus       265 ~LV~Ey~~~G  274 (274)
                      ++||||+++|
T Consensus        91 ~lv~e~~~~~  100 (303)
T 1zy4_A           91 FIQMEYCENG  100 (303)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEecCCCC
Confidence            9999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.13  E-value=5.5e-11  Score=104.82  Aligned_cols=77  Identities=27%  Similarity=0.501  Sum_probs=64.7

Q ss_pred             ceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++...     ..+..||+|.+... .....+.+.+|+.++.++ +||||++++++|...+..+|||||
T Consensus        51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  130 (344)
T 1rjb_A           51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY  130 (344)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEec
Confidence            78999999999999962     24568999999754 334456899999999999 899999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       131 ~~~g  134 (344)
T 1rjb_A          131 CCYG  134 (344)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.13  E-value=2.3e-10  Score=100.18  Aligned_cols=76  Identities=28%  Similarity=0.369  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHH-HhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIV-SMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~-~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....+|..||||.+... ......++..|+. ++..++|+||++++++|...+..+|||||+++
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~  105 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST  105 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred             heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence            7899999999999999878899999999765 3445566777776 77788999999999999999999999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.13  E-value=6.1e-11  Score=103.70  Aligned_cols=91  Identities=26%  Similarity=0.413  Sum_probs=73.1

Q ss_pred             ccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEE
Q 045713          183 RFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCR  259 (274)
Q Consensus       183 ~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~  259 (274)
                      .+++.++.....+|.  +.||+|+||.||++.....+..||+|.+.... .....+.+|+.++.++ +|+||+++++++.
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            344555555666666  79999999999999998778999999997543 2346788999999998 8999999999998


Q ss_pred             e------CCeEEEEEeccCCC
Q 045713          260 R------KQELLLVYNYMHNK  274 (274)
Q Consensus       260 ~------~~~~~LV~Ey~~~G  274 (274)
                      .      .+.++|||||+++|
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~  112 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAG  112 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTE
T ss_pred             eccCccccceEEEEEEcCCCC
Confidence            7      46789999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.13  E-value=1.1e-10  Score=104.20  Aligned_cols=77  Identities=25%  Similarity=0.313  Sum_probs=67.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.++...   ....+.+..|..++..+ +|+||+++.+++...+.++|||||+++
T Consensus        26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g  105 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG  105 (353)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence            78999999999999998778999999997541   23356788999999988 899999999999999999999999988


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       106 g  106 (353)
T 2i0e_A          106 G  106 (353)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.12  E-value=8.4e-11  Score=108.62  Aligned_cols=77  Identities=26%  Similarity=0.378  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||++...  .....+.+.+|+.+|.+++|+||+++++++...      ..++||||
T Consensus        68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E  147 (464)
T 3ttj_A           68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME  147 (464)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence            7899999999999998888899999999754  445567899999999999999999999999654      35799999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus       148 ~~~~~  152 (464)
T 3ttj_A          148 LMDAN  152 (464)
T ss_dssp             CCSEE
T ss_pred             CCCCC
Confidence            99753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.12  E-value=1.3e-10  Score=101.86  Aligned_cols=77  Identities=32%  Similarity=0.599  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEE----cCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC--eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVL----STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ--ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~----~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~--~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.+    ...+..||+|.+........+.|.+|+.++.+++|+||++++++|...+  ..++|+||+
T Consensus        47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~  126 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL  126 (326)
T ss_dssp             EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCC
T ss_pred             eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECC
Confidence            7899999999999985    3457899999998776666788999999999999999999999987644  689999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       127 ~~~  129 (326)
T 2w1i_A          127 PYG  129 (326)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.12  E-value=7.4e-11  Score=110.87  Aligned_cols=74  Identities=28%  Similarity=0.473  Sum_probs=64.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|.... +..||||.++... ...++|.+|+.+|.+++|+||++++++|.. +.++||||||++|
T Consensus       273 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g  346 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  346 (535)
T ss_dssp             EEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred             eecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence            689999999999999975 5779999997653 235689999999999999999999999965 7789999999875

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.12  E-value=1e-10  Score=103.24  Aligned_cols=75  Identities=19%  Similarity=0.321  Sum_probs=65.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHH-----------------hHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-----------------WMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~-----------------~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      +.||+|+||.||++..  .+..||+|.+......                 ..+.|.+|+.++.+++|+||++++++|..
T Consensus        37 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~  114 (348)
T 2pml_X           37 RTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN  114 (348)
T ss_dssp             EEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred             EEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence            7899999999999998  5899999999643111                 11789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      .+..++||||+++|
T Consensus       115 ~~~~~lv~e~~~~~  128 (348)
T 2pml_X          115 YDEVYIIYEYMEND  128 (348)
T ss_dssp             SSEEEEEEECCTTC
T ss_pred             CCeEEEEEeccCCC
Confidence            99999999999875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.12  E-value=1.9e-10  Score=99.93  Aligned_cols=75  Identities=28%  Similarity=0.398  Sum_probs=62.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEE--------------eCCe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCR--------------RKQE  263 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~--------------~~~~  263 (274)
                      +.||+|+||.||++.....+..||+|.+........+++.+|+.++.+++|+||+++++++.              ..+.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~   96 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS   96 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence            78999999999999998888999999998777777788999999999999999999999873              3467


Q ss_pred             EEEEEeccC
Q 045713          264 LLLVYNYMH  272 (274)
Q Consensus       264 ~~LV~Ey~~  272 (274)
                      .++||||++
T Consensus        97 ~~lv~e~~~  105 (320)
T 2i6l_A           97 VYIVQEYME  105 (320)
T ss_dssp             EEEEEECCS
T ss_pred             eeEEeeccC
Confidence            899999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.12  E-value=1.6e-10  Score=100.38  Aligned_cols=75  Identities=27%  Similarity=0.488  Sum_probs=63.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....|..||+|.+....  ..+++.+|+.++.+++|+||+++++++...+..++||||+++|
T Consensus        35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAG  109 (314)
T ss_dssp             EECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCC
Confidence            78999999999999998888999999997643  2457899999999999999999999999999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.12  E-value=2.3e-10  Score=102.26  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=67.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--------HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--------EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.||+|+||.||++....+|..||||.+....        ....+.+.+|+.++.++ +|+||++++++|...+..+|||
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  179 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF  179 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence            78999999999999998778999999987542        12245688999999998 7999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus       180 e~~~g~  185 (365)
T 2y7j_A          180 DLMRKG  185 (365)
T ss_dssp             CCCTTC
T ss_pred             EeCCCC
Confidence            999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=1.9e-10  Score=98.84  Aligned_cols=76  Identities=26%  Similarity=0.438  Sum_probs=65.2

Q ss_pred             ceeeeccCceEEEEEEc--CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLS--TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~--~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ..||+|+||.||+|...  ..+..||+|.++.. .....+.+.+|+.++.+++|+||++++++| ..+..++||||+++|
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~   94 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG   94 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence            48999999999999864  34678999999875 455677899999999999999999999999 566789999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.11  E-value=1.1e-10  Score=102.55  Aligned_cols=76  Identities=29%  Similarity=0.543  Sum_probs=59.4

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+.    .||+|.+... .....++|.+|+.++.+++|+||++++++|... ..++|+||++
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~   99 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP   99 (327)
T ss_dssp             EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCT
T ss_pred             eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecC
Confidence            789999999999999865554    3688888644 344567899999999999999999999999865 4789999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       100 ~g  101 (327)
T 3poz_A          100 FG  101 (327)
T ss_dssp             TC
T ss_pred             CC
Confidence            76

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.11  E-value=4.4e-11  Score=104.98  Aligned_cols=76  Identities=28%  Similarity=0.491  Sum_probs=64.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|.+..... .....+.+|+.++.+++|+||++++++|...+..+|||||+++
T Consensus         8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK   84 (324)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred             EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc
Confidence            789999999999999987889999999975432 2223566899999999999999999999999999999999973

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.11  E-value=1.2e-10  Score=100.03  Aligned_cols=75  Identities=32%  Similarity=0.514  Sum_probs=63.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH----Hh---HHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE----QW---MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~----~~---~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++....++..||+|.+.....    ..   .+.+.+|+.++.+++|+||+++++++....  ++||||
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~  102 (287)
T 4f0f_A           25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEF  102 (287)
T ss_dssp             EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEEC
T ss_pred             hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEe
Confidence            789999999999999987889999999865421    11   167999999999999999999999986544  799999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       103 ~~~~  106 (287)
T 4f0f_A          103 VPCG  106 (287)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.11  E-value=1.3e-10  Score=99.70  Aligned_cols=76  Identities=24%  Similarity=0.457  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....   +..||+|.+... .....+.|.+|+.++.+++|+||+++++++ ..+..++||||+++
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~   99 (281)
T 1mp8_A           21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTL   99 (281)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCTT
T ss_pred             eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCCC
Confidence            7899999999999988532   457999998764 445567899999999999999999999998 45678999999986


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       100 ~  100 (281)
T 1mp8_A          100 G  100 (281)
T ss_dssp             E
T ss_pred             C
Confidence            4

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.11  E-value=1.6e-10  Score=102.49  Aligned_cols=89  Identities=20%  Similarity=0.300  Sum_probs=75.1

Q ss_pred             CccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-----CCCccce
Q 045713          182 QRFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-----HRNLVQL  254 (274)
Q Consensus       182 ~~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~Nlv~l  254 (274)
                      ..+++++.....++|.  +.||+|+||.||++.....+..||||.+... ....+.+..|+.++.+++     |+||+++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            4566666666666776  8999999999999999878899999999753 344567788998888775     9999999


Q ss_pred             eeEEEeCCeEEEEEecc
Q 045713          255 HGYCRRKQELLLVYNYM  271 (274)
Q Consensus       255 ~g~~~~~~~~~LV~Ey~  271 (274)
                      ++++...+..+|||||+
T Consensus       102 ~~~~~~~~~~~lv~e~~  118 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL  118 (360)
T ss_dssp             EEEEEETTEEEEEECCC
T ss_pred             cceeeECCeeEEEEcCC
Confidence            99999999999999998

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.11  E-value=1.2e-10  Score=101.30  Aligned_cols=77  Identities=31%  Similarity=0.608  Sum_probs=60.8

Q ss_pred             ceeeeccCceEEEEEEcC---CCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe-----EEEE
Q 045713          198 ELIGKGGFGKVYKGVLST---SGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE-----LLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~---~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~-----~~LV  267 (274)
                      +.||+|+||.||++....   .+..||+|.+...  .....+.+.+|+.++.+++|+||++++++|...+.     .++|
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v  119 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI  119 (313)
T ss_dssp             EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEE
T ss_pred             cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEE
Confidence            789999999999998754   3458999998754  44556789999999999999999999999987553     4999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      +||+++|
T Consensus       120 ~e~~~~~  126 (313)
T 3brb_A          120 LPFMKYG  126 (313)
T ss_dssp             EECCTTC
T ss_pred             EecccCC
Confidence            9999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.11  E-value=2e-10  Score=98.98  Aligned_cols=75  Identities=25%  Similarity=0.418  Sum_probs=62.5

Q ss_pred             eeeeccCceEEEEEE--cCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVL--STSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~--~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||++..  ...+..||||.++...  ....+++.+|+.++.+++|+||++++++| ..+..++||||+++|
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~  102 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG  102 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence            899999999999965  4446889999997542  33467899999999999999999999999 567789999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.11  E-value=2e-10  Score=97.36  Aligned_cols=75  Identities=32%  Similarity=0.459  Sum_probs=66.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..||+|.+..... ..+++.+|+.++.+++|+||++++++|...+..++||||+++|
T Consensus        14 ~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (267)
T 3t9t_A           14 QEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG   88 (267)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred             eEecCCCceeEEEEEecC-CCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence            789999999999999863 67899999976532 2467999999999999999999999999999999999999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.10  E-value=1.1e-10  Score=101.48  Aligned_cols=87  Identities=21%  Similarity=0.362  Sum_probs=69.4

Q ss_pred             hHHHhhcCcc--ceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEE
Q 045713          188 DLYKATKGFK--ELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYC  258 (274)
Q Consensus       188 el~~at~~f~--~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~  258 (274)
                      +......+|.  +.||+|+||.||++...     ..+..||||.+... .....+.+.+|+.++.++ +|+||++++++|
T Consensus        21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            3333344454  78999999999999852     34588999999765 445567899999999999 799999999999


Q ss_pred             EeCC-eEEEEEeccCCC
Q 045713          259 RRKQ-ELLLVYNYMHNK  274 (274)
Q Consensus       259 ~~~~-~~~LV~Ey~~~G  274 (274)
                      ...+ ..++||||+++|
T Consensus       101 ~~~~~~~~lv~e~~~~~  117 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFG  117 (316)
T ss_dssp             CCTTSCCEEEEECCTTE
T ss_pred             ecCCCceEEEEEcCCCC
Confidence            8755 489999999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.10  E-value=2.1e-10  Score=102.63  Aligned_cols=76  Identities=24%  Similarity=0.357  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||.+...  .....+.+.+|+.++.+++|+||+++++++...+      ..+||||
T Consensus        31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e  110 (371)
T 2xrw_A           31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME  110 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred             eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence            7899999999999998878899999999754  3455678999999999999999999999997654      6899999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+++
T Consensus       111 ~~~~  114 (371)
T 2xrw_A          111 LMDA  114 (371)
T ss_dssp             CCSE
T ss_pred             cCCC
Confidence            9974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.10  E-value=7.2e-11  Score=104.54  Aligned_cols=76  Identities=26%  Similarity=0.449  Sum_probs=63.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-----HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-----QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++....+|..||+|.+.....     ...+.+.+|+.++.+++|+||++++++|...+..++||||++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   95 (346)
T 1ua2_A           16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   95 (346)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC
Confidence            789999999999999987889999999875321     113468899999999999999999999999999999999997


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus        96 ~   96 (346)
T 1ua2_A           96 T   96 (346)
T ss_dssp             E
T ss_pred             C
Confidence            4

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.09  E-value=1.7e-10  Score=100.86  Aligned_cols=76  Identities=18%  Similarity=0.299  Sum_probs=62.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||.+....        ......+.+|+.++.+++|+||+++++++...+ .++|||
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e   94 (322)
T 2ycf_A           16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLE   94 (322)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEE
T ss_pred             eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEe
Confidence            78999999999999998888999999986531        122345889999999999999999999987554 899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus        95 ~~~~~   99 (322)
T 2ycf_A           95 LMEGG   99 (322)
T ss_dssp             CCTTE
T ss_pred             cCCCC
Confidence            99864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.09  E-value=1.2e-10  Score=104.65  Aligned_cols=77  Identities=34%  Similarity=0.564  Sum_probs=64.5

Q ss_pred             ceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....   +..||+|.++.. .....++|.+|+.++.+++|+||++++++|.. .+..++||||++
T Consensus        95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~  174 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  174 (373)
T ss_dssp             EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCT
T ss_pred             cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCC
Confidence            7899999999999987432   246899998754 44557889999999999999999999999865 457899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       175 ~g  176 (373)
T 3c1x_A          175 HG  176 (373)
T ss_dssp             TC
T ss_pred             CC
Confidence            76

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.09  E-value=2.1e-10  Score=100.77  Aligned_cols=77  Identities=19%  Similarity=0.364  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.+...  ......++.+|+.++.++ +|+||++++++|...+..++||||+++|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~  114 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG  114 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence            6899999999999999888999999999754  233467899999999998 5699999999999999999999999875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.09  E-value=1.7e-10  Score=111.48  Aligned_cols=77  Identities=19%  Similarity=0.392  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcC-CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe-----EEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLST-SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE-----LLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~-----~~LV~Ey  270 (274)
                      +.||+|+||.||++.... ++..||||.+... .......|.+|+.++.+++|+||++++++|...+.     .+|||||
T Consensus        86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~  165 (681)
T 2pzi_A           86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY  165 (681)
T ss_dssp             EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence            789999999999999864 5789999998654 44556789999999999999999999999987665     7999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |++|
T Consensus       166 ~~g~  169 (681)
T 2pzi_A          166 VGGQ  169 (681)
T ss_dssp             CCCE
T ss_pred             CCCC
Confidence            9874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.09  E-value=2.9e-10  Score=97.55  Aligned_cols=76  Identities=25%  Similarity=0.290  Sum_probs=62.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHH-HHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKE-FVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~-f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....+..||+|++... ......+ +..+...+..++|+||++++++|...+..++||||+++
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   90 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT   90 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE
T ss_pred             HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc
Confidence            7899999999999999878899999999765 3333334 44445558889999999999999999999999999974

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.08  E-value=2.3e-10  Score=99.99  Aligned_cols=77  Identities=29%  Similarity=0.442  Sum_probs=66.0

Q ss_pred             ceeeeccCceEEEEEEc----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLS----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.+.    ..+..||||.+... .....+.|.+|+.++.+++|+||++++++|...  ..+++||||
T Consensus        37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~  116 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY  116 (318)
T ss_dssp             EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred             heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence            78999999999888653    35788999999865 445577899999999999999999999999874  578999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       117 ~~~~  120 (318)
T 3lxp_A          117 VPLG  120 (318)
T ss_dssp             CTTC
T ss_pred             ccCC
Confidence            9875

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.08  E-value=1.1e-10  Score=103.48  Aligned_cols=73  Identities=21%  Similarity=0.301  Sum_probs=63.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..+|+|.+.....    .+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg  101 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG  101 (342)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence            789999999999999988899999999976532    245677888777 7999999999999999999999999876

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.08  E-value=1.2e-10  Score=106.96  Aligned_cols=75  Identities=27%  Similarity=0.346  Sum_probs=57.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..||||++...  .....+.+.+|+.+|.+++|+||++++++|...     ..++|||||
T Consensus        59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~  138 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI  138 (458)
T ss_dssp             CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECC
T ss_pred             eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEec
Confidence            7899999999999998878899999999654  445567899999999999999999999999543     468999999


Q ss_pred             cC
Q 045713          271 MH  272 (274)
Q Consensus       271 ~~  272 (274)
                      +.
T Consensus       139 ~~  140 (458)
T 3rp9_A          139 AD  140 (458)
T ss_dssp             CS
T ss_pred             cc
Confidence            85

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.07  E-value=1.5e-10  Score=102.89  Aligned_cols=87  Identities=25%  Similarity=0.433  Sum_probs=71.6

Q ss_pred             hhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCC-----------HHhHHHHHHHHHHhcCCCCCCcc
Q 045713          186 YKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-----------EQWMKEFVSEIVSMGALRHRNLV  252 (274)
Q Consensus       186 ~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-----------~~~~~~f~~E~~~l~~l~H~Nlv  252 (274)
                      .+++.....+|.  +.||+|+||.||++.... |..||||++....           ....+.+.+|+.++.+++|+||+
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            467777777777  899999999999998865 8999999985431           22247899999999999999999


Q ss_pred             ceeeEEEeC-----CeEEEEEeccCC
Q 045713          253 QLHGYCRRK-----QELLLVYNYMHN  273 (274)
Q Consensus       253 ~l~g~~~~~-----~~~~LV~Ey~~~  273 (274)
                      +++++|...     ..++|||||+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~~  118 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMRT  118 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCSE
T ss_pred             ceeeeEEeccCCCcceEEEEEccCCC
Confidence            999999653     357999999974

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.07  E-value=1.1e-10  Score=101.54  Aligned_cols=71  Identities=31%  Similarity=0.572  Sum_probs=62.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...  +..||+|.+...  ...+.|.+|+.++.+++|+||++++|+|.  +..+|||||+++|
T Consensus        14 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~   84 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGG   84 (307)
T ss_dssp             EEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTC
T ss_pred             eEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCC
Confidence            78999999999999986  688999998654  34578999999999999999999999886  4589999999876

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.07  E-value=3.1e-10  Score=103.70  Aligned_cols=75  Identities=24%  Similarity=0.369  Sum_probs=66.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+..||||++...  .....+.+.+|+.+|.+++|+||+++++++...     +.++|||||
T Consensus        32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~  111 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI  111 (432)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence            7899999999999999888899999999754  445567899999999999999999999999766     568999999


Q ss_pred             cC
Q 045713          271 MH  272 (274)
Q Consensus       271 ~~  272 (274)
                      |.
T Consensus       112 ~~  113 (432)
T 3n9x_A          112 AD  113 (432)
T ss_dssp             CS
T ss_pred             CC
Confidence            86

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.07  E-value=2.2e-10  Score=102.86  Aligned_cols=65  Identities=29%  Similarity=0.409  Sum_probs=52.8

Q ss_pred             hcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC
Q 045713          193 TKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK  261 (274)
Q Consensus       193 t~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~  261 (274)
                      ..+|.  +.||+|+||.||++.....|..||+|++.....    ...+|+.+|.+++|+||++++++|...
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~   72 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTT   72 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeec
Confidence            34454  799999999999999988899999999976522    234699999999999999999998543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.07  E-value=3.5e-10  Score=97.56  Aligned_cols=77  Identities=34%  Similarity=0.564  Sum_probs=64.0

Q ss_pred             ceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....   ...+|+|.+... .....+.+.+|+.++.+++|+||++++++|.. .+..++||||++
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~  110 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  110 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCT
T ss_pred             ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCC
Confidence            7899999999999987532   245899999765 44556789999999999999999999999765 457799999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       111 ~~  112 (298)
T 3f66_A          111 HG  112 (298)
T ss_dssp             TC
T ss_pred             CC
Confidence            75

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.05  E-value=2.7e-10  Score=97.35  Aligned_cols=74  Identities=30%  Similarity=0.503  Sum_probs=63.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.... +..||+|.+.... ...+.|.+|+.++.+++|+||+++++++. .+..++||||+++|
T Consensus        19 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~   92 (279)
T 1qpc_A           19 ERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENG   92 (279)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTC
T ss_pred             eeecCCCCeEEEEEEEcC-CcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCC
Confidence            789999999999999864 6789999997643 23568999999999999999999999986 55689999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.05  E-value=2.1e-10  Score=102.16  Aligned_cols=80  Identities=18%  Similarity=0.188  Sum_probs=64.0

Q ss_pred             hhcCcc--ceeeeccCceEEEEE-----EcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC---CCCccceeeEEEeC
Q 045713          192 ATKGFK--ELIGKGGFGKVYKGV-----LSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR---HRNLVQLHGYCRRK  261 (274)
Q Consensus       192 at~~f~--~~lG~G~fG~Vy~g~-----~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~Nlv~l~g~~~~~  261 (274)
                      ...+|.  +.||+|+||.||+|.     ....+..||+|.++...   ..++..|+.++.+++   |+|+++++++|...
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            334444  789999999999994     34457899999997654   346777777777765   99999999999999


Q ss_pred             CeEEEEEeccCCC
Q 045713          262 QELLLVYNYMHNK  274 (274)
Q Consensus       262 ~~~~LV~Ey~~~G  274 (274)
                      +..+||||||++|
T Consensus       140 ~~~~lv~e~~~~g  152 (365)
T 3e7e_A          140 NGSVLVGELYSYG  152 (365)
T ss_dssp             SCEEEEECCCCSC
T ss_pred             CCcEEEEeccCCC
Confidence            9999999999976

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.05  E-value=1.8e-10  Score=102.09  Aligned_cols=86  Identities=28%  Similarity=0.497  Sum_probs=58.3

Q ss_pred             hHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe--
Q 045713          188 DLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE--  263 (274)
Q Consensus       188 el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~--  263 (274)
                      +......+|.  +.||+|+||.||++.....+..||||++..... ....+.+|+..+..++|+||++++++|...+.  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            3444455565  789999999999999988889999999865422 23356778888888899999999999976443  


Q ss_pred             -----EEEEEeccCCC
Q 045713          264 -----LLLVYNYMHNK  274 (274)
Q Consensus       264 -----~~LV~Ey~~~G  274 (274)
                           +++||||++++
T Consensus        96 ~~~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDT  111 (360)
T ss_dssp             TTCEEEEEEEECCSCB
T ss_pred             ccceeEEEEeeccccc
Confidence                 78999999864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.05  E-value=3.7e-10  Score=96.46  Aligned_cols=73  Identities=26%  Similarity=0.520  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----------------C
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----------------K  261 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----------------~  261 (274)
                      +.||+|+||.||++....++..||+|.+....    ..+.+|+.++.+++|+||+++++++..                .
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (284)
T 2a19_B           17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT   92 (284)
T ss_dssp             EEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred             eeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence            78999999999999998778999999997653    356789999999999999999999864                3


Q ss_pred             CeEEEEEeccCCC
Q 045713          262 QELLLVYNYMHNK  274 (274)
Q Consensus       262 ~~~~LV~Ey~~~G  274 (274)
                      ..+++||||+++|
T Consensus        93 ~~~~lv~e~~~~~  105 (284)
T 2a19_B           93 KCLFIQMEFCDKG  105 (284)
T ss_dssp             EEEEEEECCCCSC
T ss_pred             ceEEEEEeccCCC
Confidence            4579999999875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.04  E-value=6.4e-10  Score=97.30  Aligned_cols=74  Identities=22%  Similarity=0.376  Sum_probs=65.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEe--CCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRR--KQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~--~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++.....+..||+|.++...   .+.+.+|+.++.+++ |+||+++++++..  ....++||||+++|
T Consensus        42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~  118 (330)
T 3nsz_A           42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT  118 (330)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence            78999999999999988788999999997543   457899999999997 9999999999987  56789999999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.04  E-value=2.1e-10  Score=101.50  Aligned_cols=76  Identities=32%  Similarity=0.575  Sum_probs=64.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--------CCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--------KQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--------~~~~~LV  267 (274)
                      +.||+|+||.||++.....|..||+|.+...  .......+.+|+.++.+++|+||++++++|..        .+.++||
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv  102 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV  102 (351)
T ss_dssp             EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred             EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence            7899999999999999878999999998654  22334578899999999999999999999987        3468999


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      |||+++
T Consensus       103 ~e~~~~  108 (351)
T 3mi9_A          103 FDFCEH  108 (351)
T ss_dssp             EECCSE
T ss_pred             EeccCC
Confidence            999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.04  E-value=4.9e-10  Score=99.00  Aligned_cols=75  Identities=23%  Similarity=0.425  Sum_probs=66.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....|..||||.+... .......+.+|+.++.+++|+||+++++++...     ...++|+||+
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~   96 (353)
T 2b9h_A           17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM   96 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC
T ss_pred             eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc
Confidence            7899999999999999878899999999754 445567889999999999999999999998764     6789999998


Q ss_pred             C
Q 045713          272 H  272 (274)
Q Consensus       272 ~  272 (274)
                      .
T Consensus        97 ~   97 (353)
T 2b9h_A           97 Q   97 (353)
T ss_dssp             S
T ss_pred             C
Confidence            6

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.04  E-value=5.5e-10  Score=100.37  Aligned_cols=76  Identities=32%  Similarity=0.529  Sum_probs=58.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCC--eEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQ--ELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~--~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....|..||+|++...  .....+.+.+|+.++.+++ |+||+++++++...+  .++||||||+
T Consensus        15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~   94 (388)
T 3oz6_A           15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME   94 (388)
T ss_dssp             EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred             EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence            7899999999999999888999999999643  4455678899999999997 999999999998654  6899999997


Q ss_pred             C
Q 045713          273 N  273 (274)
Q Consensus       273 ~  273 (274)
                      +
T Consensus        95 ~   95 (388)
T 3oz6_A           95 T   95 (388)
T ss_dssp             E
T ss_pred             c
Confidence            3

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.04  E-value=1.5e-10  Score=101.52  Aligned_cols=76  Identities=30%  Similarity=0.569  Sum_probs=62.7

Q ss_pred             ceeeeccCceEEEEEEcCCCce----EEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLP----IAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~----vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||+|.....+..    ||+|.+... .....+.+.+|+.++.+++|+||++++++|. .+..++|+||++
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~   97 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLP   97 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCT
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCC
Confidence            7899999999999998766654    888888544 2233456788999999999999999999986 567899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        98 ~~   99 (325)
T 3kex_A           98 LG   99 (325)
T ss_dssp             TC
T ss_pred             CC
Confidence            76

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.04  E-value=4.9e-10  Score=100.19  Aligned_cols=75  Identities=28%  Similarity=0.476  Sum_probs=66.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeE------EEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQEL------LLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~------~LV~E  269 (274)
                      +.||+|+||.||++.....|..||+|.+...  .....+.+.+|+.++.+++|+||++++++|...+..      ++|||
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  127 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  127 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence            7899999999999999888999999999764  444567899999999999999999999999877654      99999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      |+.
T Consensus       128 ~~~  130 (371)
T 4exu_A          128 FMQ  130 (371)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.03  E-value=3.9e-10  Score=98.58  Aligned_cols=75  Identities=27%  Similarity=0.423  Sum_probs=66.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEe--------CCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRR--------KQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~--------~~~~~LV~  268 (274)
                      +.||+|+||.||++.....+..||+|++........+.+.+|+.++.+++ |+||++++++|..        ...+++++
T Consensus        34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~  113 (337)
T 3ll6_A           34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLT  113 (337)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred             EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEE
Confidence            78999999999999998778999999997776677788999999999996 9999999999953        33479999


Q ss_pred             eccC
Q 045713          269 NYMH  272 (274)
Q Consensus       269 Ey~~  272 (274)
                      ||+.
T Consensus       114 e~~~  117 (337)
T 3ll6_A          114 ELCK  117 (337)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            9986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.02  E-value=5.3e-10  Score=95.52  Aligned_cols=73  Identities=41%  Similarity=0.576  Sum_probs=62.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-CeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-QELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...  |..||+|.++...  ..+.|.+|+.++.+++|+||+++++++... +..++||||+++|
T Consensus        27 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~  100 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  100 (278)
T ss_dssp             EEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             eEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCC
Confidence            78999999999999885  7899999997543  356799999999999999999999998654 4689999999864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.02  E-value=5.6e-10  Score=95.53  Aligned_cols=76  Identities=29%  Similarity=0.503  Sum_probs=64.0

Q ss_pred             ceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++.....   +..||+|.+... .....+.|.+|+.++.+++|+||+++++++. .+..++||||+++
T Consensus        18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~   96 (281)
T 3cc6_A           18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPY   96 (281)
T ss_dssp             EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred             EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCEEEEecCCC
Confidence            7899999999999987532   346999999765 4455778999999999999999999999986 4567899999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        97 ~   97 (281)
T 3cc6_A           97 G   97 (281)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.02  E-value=8.1e-10  Score=97.09  Aligned_cols=76  Identities=28%  Similarity=0.507  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCCce----EEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLP----IAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~----vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....+..    ||+|.+... .....+++.+|+.++.+++|+||++++++|.... .++|+||++
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~   99 (327)
T 3lzb_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP   99 (327)
T ss_dssp             EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCS
T ss_pred             EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecC
Confidence            7899999999999998665554    588887644 3445678999999999999999999999998654 788999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       100 ~g  101 (327)
T 3lzb_A          100 FG  101 (327)
T ss_dssp             SC
T ss_pred             CC
Confidence            76

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.02  E-value=6.8e-10  Score=98.38  Aligned_cols=75  Identities=27%  Similarity=0.467  Sum_probs=65.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe------EEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE------LLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~------~~LV~E  269 (274)
                      +.||+|+||.||++.....|..||||.+...  .....+.+.+|+.++.+++|+||+++++++...+.      .++|||
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  109 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  109 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence            7899999999999999888999999999754  34456789999999999999999999999987654      499999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      |++
T Consensus       110 ~~~  112 (353)
T 3coi_A          110 FMQ  112 (353)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.01  E-value=5e-10  Score=99.80  Aligned_cols=76  Identities=24%  Similarity=0.427  Sum_probs=66.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||+|.+... .....+.+.+|+.++.+++|+||+++++++...     ...++|+||+
T Consensus        33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~  112 (364)
T 3qyz_A           33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM  112 (364)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred             EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc
Confidence            7899999999999998878899999999754 344567899999999999999999999999765     3689999998


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      .+
T Consensus       113 ~~  114 (364)
T 3qyz_A          113 ET  114 (364)
T ss_dssp             SE
T ss_pred             Cc
Confidence            63

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.01  E-value=2.3e-10  Score=104.19  Aligned_cols=72  Identities=35%  Similarity=0.516  Sum_probs=60.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC----C--eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK----Q--ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~----~--~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....|..||||++.....    .+.+|+.+|.+++|+|||+++++|...    +  .++|||||+
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~  135 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV  135 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECC
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcc
Confidence            789999999999999987889999999975422    234699999999999999999998642    2  267999999


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      ++
T Consensus       136 ~~  137 (420)
T 1j1b_A          136 PE  137 (420)
T ss_dssp             CE
T ss_pred             cc
Confidence            74

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.01  E-value=9.2e-10  Score=94.87  Aligned_cols=72  Identities=29%  Similarity=0.440  Sum_probs=57.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC--CCCCCccceeeEEEeC----CeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA--LRHRNLVQLHGYCRRK----QELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~Nlv~l~g~~~~~----~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|...  +..||||.+...   ....+..|.+++..  ++|+||++++++|...    ...++||||+
T Consensus        14 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~   88 (301)
T 3q4u_A           14 ECVGKGRYGEVWRGSWQ--GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH   88 (301)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred             EeeccCCCcEEEEEEEC--CEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence            78999999999999884  789999999653   23455566665544  8999999999997653    4579999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        89 ~~g   91 (301)
T 3q4u_A           89 EMG   91 (301)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            876

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.00  E-value=3.3e-10  Score=101.48  Aligned_cols=75  Identities=12%  Similarity=0.232  Sum_probs=60.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHH---HHhcCCCCCCcccee-------eEEEeCCe-
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEI---VSMGALRHRNLVQLH-------GYCRRKQE-  263 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~---~~l~~l~H~Nlv~l~-------g~~~~~~~-  263 (274)
                      +.||+|+||.||+|....+|..||||.+...   .....+.|.+|+   ..+.+++|||||+++       +++...+. 
T Consensus        79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  158 (377)
T 3byv_A           79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK  158 (377)
T ss_dssp             EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred             ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence            7899999999999998777899999999743   334567899999   566777899999998       66665532 


Q ss_pred             ----------------EEEEEeccC
Q 045713          264 ----------------LLLVYNYMH  272 (274)
Q Consensus       264 ----------------~~LV~Ey~~  272 (274)
                                      .+|||||+.
T Consensus       159 ~~~~~~~~~~~~~i~~~~lv~E~~~  183 (377)
T 3byv_A          159 KMIRVRLDERDMWVLSRFFLYPRMQ  183 (377)
T ss_dssp             SEEEC------CEEESEEEEEECCS
T ss_pred             cccccccCCCceEEEEEEEEEeccC
Confidence                            789999994

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.00  E-value=4.8e-10  Score=100.24  Aligned_cols=74  Identities=27%  Similarity=0.481  Sum_probs=58.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~E  269 (274)
                      +.||+|+||.||++.....|..||||.+...  .....+.+.+|+.++.+++|+||+++++++...+      .++||||
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e  110 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP  110 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence            7899999999999999888999999999653  4445678999999999999999999999997653      4699999


Q ss_pred             cc
Q 045713          270 YM  271 (274)
Q Consensus       270 y~  271 (274)
                      ||
T Consensus       111 ~~  112 (367)
T 1cm8_A          111 FM  112 (367)
T ss_dssp             CC
T ss_pred             cC
Confidence            98

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.00  E-value=1.1e-09  Score=94.32  Aligned_cols=73  Identities=30%  Similarity=0.522  Sum_probs=62.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++...   ..+|+|.++..  .....+.|.+|+.++.+++|+||+++++++ ..+..++||||+++|
T Consensus        30 ~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~  104 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS  104 (289)
T ss_dssp             EEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred             eEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence            78999999999999875   35999999754  455567899999999999999999999976 456689999999754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.99  E-value=5.2e-10  Score=98.22  Aligned_cols=72  Identities=18%  Similarity=0.140  Sum_probs=63.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||||.+.....  .+.+.+|+.++.++ +|+||+++++++...+..++||||+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             EEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            789999999999999877789999999875422  23588999999999 9999999999999999999999999

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.98  E-value=6.5e-11  Score=104.27  Aligned_cols=75  Identities=24%  Similarity=0.488  Sum_probs=59.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--------HHhHHHHHHHHHHhcCCC---------CCCccceeeEEE-
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--------EQWMKEFVSEIVSMGALR---------HRNLVQLHGYCR-  259 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~Nlv~l~g~~~-  259 (274)
                      +.||+|+||.||++...  |..||||++....        ....+.+.+|+.++.+++         |+|+|++.+.+. 
T Consensus        26 ~~lG~G~~g~V~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~  103 (336)
T 2vuw_A           26 EKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV  103 (336)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred             eeecccCceEEEEEEeC--CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence            78999999999999983  7999999997542        122467888888887775         888888887653 


Q ss_pred             -----------------------------eCCeEEEEEeccCCC
Q 045713          260 -----------------------------RKQELLLVYNYMHNK  274 (274)
Q Consensus       260 -----------------------------~~~~~~LV~Ey~~~G  274 (274)
                                                   ..+.++||||||++|
T Consensus       104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g  147 (336)
T 2vuw_A          104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGG  147 (336)
T ss_dssp             ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCC
T ss_pred             cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCC
Confidence                                         157899999999876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.97  E-value=1.3e-09  Score=98.65  Aligned_cols=72  Identities=17%  Similarity=0.180  Sum_probs=60.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC-CCCCCccceeeEEEe----CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRR----KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~----~~~~~LV~Ey~~  272 (274)
                      ++||+|+||.||++.....+..||||.++..     ..+.+|+.++.+ .+|+||+++++++..    .+.++||||||+
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~  142 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD  142 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence            5799999999999999888899999999643     346678877644 589999999999875    556899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus       143 gg  144 (400)
T 1nxk_A          143 GG  144 (400)
T ss_dssp             SE
T ss_pred             CC
Confidence            75

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.97  E-value=2.3e-09  Score=94.18  Aligned_cols=73  Identities=32%  Similarity=0.491  Sum_probs=62.4

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC--CCCCCccceeeEEEeCC----eEEEEEec
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA--LRHRNLVQLHGYCRRKQ----ELLLVYNY  270 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~Nlv~l~g~~~~~~----~~~LV~Ey  270 (274)
                      .+.||+|+||.||++...  +..||+|.+...   ....+.+|.+++..  ++|+||+++++++...+    ..++||||
T Consensus        47 ~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  121 (342)
T 1b6c_B           47 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY  121 (342)
T ss_dssp             EEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred             EeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence            389999999999999985  789999999643   34567888888765  79999999999998876    78999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       122 ~~~g  125 (342)
T 1b6c_B          122 HEHG  125 (342)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.96  E-value=1.5e-09  Score=93.90  Aligned_cols=72  Identities=18%  Similarity=0.207  Sum_probs=61.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHh-cCCCCCCccceeeEEEe----CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSM-GALRHRNLVQLHGYCRR----KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l-~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey~~  272 (274)
                      ++||+|+||.||++.....+..||+|.++..     ..+.+|+.++ ..++|+||+++++++..    ....+|||||++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~   98 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   98 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence            5799999999999999878899999999653     3567788877 55699999999999987    667899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        99 ~~  100 (299)
T 3m2w_A           99 GG  100 (299)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.96  E-value=1.7e-09  Score=93.87  Aligned_cols=75  Identities=21%  Similarity=0.304  Sum_probs=56.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHH-HHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKE-FVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~-f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      +.||+|+||.||++.....|..||+|.+... ......+ +..+..++..++|+||++++++|...+..+|||||+.
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (318)
T 2dyl_A           31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMG  107 (318)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEeccC
Confidence            6899999999999999877899999999765 3333334 4444456888899999999999999999999999984

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.96  E-value=1.4e-09  Score=104.71  Aligned_cols=76  Identities=22%  Similarity=0.451  Sum_probs=64.9

Q ss_pred             ceeeeccCceEEEEEEcC---CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST---SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~---~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|....   .+..||+|.+... .....+.|.+|+.+|.+++||||++++|+|. .+..++||||+++
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~  474 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL  474 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCC
Confidence            789999999999998853   2467999998764 4455678999999999999999999999984 5678999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       475 g  475 (656)
T 2j0j_A          475 G  475 (656)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.96  E-value=7.6e-10  Score=100.09  Aligned_cols=74  Identities=23%  Similarity=0.414  Sum_probs=57.7

Q ss_pred             ceeeeccCceEEEEEEc--CCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLS--TSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~--~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++...  ..+..||+|.+.....  ...+.+|+.+|.+++|+||++++++|..  ...++|||||+++
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            57999999999999975  3478899999975422  3468899999999999999999999965  5678999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.95  E-value=3.5e-09  Score=92.69  Aligned_cols=72  Identities=26%  Similarity=0.426  Sum_probs=59.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC--CCCCCccceeeEEEeC----CeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA--LRHRNLVQLHGYCRRK----QELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~Nlv~l~g~~~~~----~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++...  +..||||.+....   ...+..|.+++..  ++|+||+++++++...    ...++||||+
T Consensus        43 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~  117 (337)
T 3mdy_A           43 KQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH  117 (337)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred             eEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence            89999999999999986  7899999996542   3345556665554  4999999999999887    6899999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       118 ~~g  120 (337)
T 3mdy_A          118 ENG  120 (337)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            876

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.95  E-value=3.6e-10  Score=100.53  Aligned_cols=77  Identities=21%  Similarity=0.337  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEEc---CCCceEEEEEEccCC----HHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLS---TSGLPIAVKKISHDS----EQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~---~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++...   ..+..||||.++...    ......+.+|+.++.++ +|+||+++++++...+..+||||
T Consensus        60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  139 (355)
T 1vzo_A           60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD  139 (355)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEEC
T ss_pred             EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEee
Confidence            78999999999999873   357999999986431    12344677899999998 69999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      |+++|
T Consensus       140 ~~~~~  144 (355)
T 1vzo_A          140 YINGG  144 (355)
T ss_dssp             CCCSC
T ss_pred             cCCCC
Confidence            99876

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.95  E-value=8.8e-10  Score=106.35  Aligned_cols=77  Identities=25%  Similarity=0.318  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..||||.++..   .....+.+..|..++..+ +|+||+++.+++...+.++|||||+++
T Consensus       347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~g  426 (674)
T 3pfq_A          347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG  426 (674)
T ss_dssp             EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCS
T ss_pred             EEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCC
Confidence            7899999999999999888899999999753   122346788999999987 799999999999999999999999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       427 g  427 (674)
T 3pfq_A          427 G  427 (674)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.94  E-value=1.3e-09  Score=97.50  Aligned_cols=75  Identities=27%  Similarity=0.407  Sum_probs=61.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      +.||+|+||.||++.....|..||||++...  .....+.+.+|+.++.+++|+||+++++++...      ...++|+|
T Consensus        35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e  114 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH  114 (367)
T ss_dssp             EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence            7899999999999998888999999999654  445567899999999999999999999999754      55799999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      |+.
T Consensus       115 ~~~  117 (367)
T 2fst_X          115 LMG  117 (367)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            983

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.94  E-value=2.1e-09  Score=96.88  Aligned_cols=73  Identities=22%  Similarity=0.347  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCC--CCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALR--HRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.... +..||||.+...  .....+.+.+|+.+|.+++  |+||+++++++...+.++||||+.
T Consensus        62 ~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~  138 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG  138 (390)
T ss_dssp             EEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecC
Confidence            789999999999999865 889999999754  4556678999999999996  599999999999999999999954

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.91  E-value=1.2e-09  Score=93.76  Aligned_cols=76  Identities=33%  Similarity=0.537  Sum_probs=56.2

Q ss_pred             ceeeeccCceEEEEEEcC-CC--ceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-SG--LPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-~g--~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.... .+  ..||+|.++..   .....+.+.+|+.++.+++|+||+++++++.... .++|+||+
T Consensus        24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~  102 (291)
T 1u46_A           24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA  102 (291)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred             eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence            789999999999998642 22  36899998754   2345678999999999999999999999997654 89999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       103 ~~~  105 (291)
T 1u46_A          103 PLG  105 (291)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.90  E-value=2.8e-09  Score=94.14  Aligned_cols=73  Identities=22%  Similarity=0.353  Sum_probs=64.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCC--CCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRH--RNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H--~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++... .+..||||.+...  .....+.|.+|+.+|.+++|  +||++++++|...+.++|||||.
T Consensus        15 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~   91 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG   91 (343)
T ss_dssp             EEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCC
Confidence            78999999999999885 4789999999754  45556789999999999976  99999999999999999999964

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.89  E-value=2.2e-09  Score=93.16  Aligned_cols=76  Identities=28%  Similarity=0.433  Sum_probs=60.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-----HHhHHHHHHHHHHhcCC---CCCCccceeeEEEeCC-----eE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-----EQWMKEFVSEIVSMGAL---RHRNLVQLHGYCRRKQ-----EL  264 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~~~~-----~~  264 (274)
                      +.||+|+||.||++.....+..||+|.+....     ......+.+|+.++.++   +|+||++++++|....     ..
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~   94 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV   94 (308)
T ss_dssp             EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence            78999999999999987778999999986321     11124566777776665   5999999999998765     47


Q ss_pred             EEEEeccCC
Q 045713          265 LLVYNYMHN  273 (274)
Q Consensus       265 ~LV~Ey~~~  273 (274)
                      ++||||+.+
T Consensus        95 ~lv~e~~~~  103 (308)
T 3g33_A           95 TLVFEHVDQ  103 (308)
T ss_dssp             EEEEECCCC
T ss_pred             EEEehhhhc
Confidence            999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.89  E-value=2.4e-09  Score=95.71  Aligned_cols=75  Identities=19%  Similarity=0.285  Sum_probs=64.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC--------CCCccceeeEEE----eCCeEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR--------HRNLVQLHGYCR----RKQELL  265 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--------H~Nlv~l~g~~~----~~~~~~  265 (274)
                      +.||+|+||.||++.....+..||+|.+... ....+.+.+|+.++.+++        |+||+++++++.    ....++
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~  121 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC  121 (397)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred             EEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence            7899999999999998878899999999754 445677899999998885        788999999987    445789


Q ss_pred             EEEeccCC
Q 045713          266 LVYNYMHN  273 (274)
Q Consensus       266 LV~Ey~~~  273 (274)
                      |||||+.+
T Consensus       122 lv~e~~~~  129 (397)
T 1wak_A          122 MVFEVLGH  129 (397)
T ss_dssp             EEECCCCC
T ss_pred             EEEeccCc
Confidence            99999954

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.89  E-value=5.5e-09  Score=95.35  Aligned_cols=75  Identities=19%  Similarity=0.374  Sum_probs=63.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC------CCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL------RHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l------~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||||.++.. ....+++.+|+.++..+      +|+||++++++|...+.++|||||+
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  181 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL  181 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred             EEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence            7899999999999999888899999999754 33355677777776655      6789999999999999999999999


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      .+
T Consensus       182 ~~  183 (429)
T 3kvw_A          182 SM  183 (429)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.88  E-value=3e-10  Score=108.93  Aligned_cols=77  Identities=27%  Similarity=0.399  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe------CCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR------KQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~------~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....|..||||.+... .....+.|.+|+.++.+++||||+++++++..      .+..+|||||
T Consensus        20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy   99 (676)
T 3qa8_A           20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY   99 (676)
T ss_dssp             CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEEC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEe
Confidence            7899999999999998877899999998765 55567789999999999999999999998765      5677999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus       100 ~~gg  103 (676)
T 3qa8_A          100 CEGG  103 (676)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            9876

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.88  E-value=9.3e-10  Score=96.00  Aligned_cols=82  Identities=28%  Similarity=0.509  Sum_probs=61.9

Q ss_pred             hhcCcc--ceeeeccCceEEEEEEc-CCCceEEEEEEccCC--HHhHHHHHHHHHHhcCC---CCCCccceeeEEE----
Q 045713          192 ATKGFK--ELIGKGGFGKVYKGVLS-TSGLPIAVKKISHDS--EQWMKEFVSEIVSMGAL---RHRNLVQLHGYCR----  259 (274)
Q Consensus       192 at~~f~--~~lG~G~fG~Vy~g~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~----  259 (274)
                      +..+|.  +.||+|+||.||++... ..+..||+|.+....  ......+.+|+.++..+   +|+||++++++|.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            344555  79999999999999984 567899999986431  11223466677666555   8999999999997    


Q ss_pred             -eCCeEEEEEeccCC
Q 045713          260 -RKQELLLVYNYMHN  273 (274)
Q Consensus       260 -~~~~~~LV~Ey~~~  273 (274)
                       .....++||||+++
T Consensus        89 ~~~~~~~lv~e~~~~  103 (326)
T 1blx_A           89 DRETKLTLVFEHVDQ  103 (326)
T ss_dssp             SSEEEEEEEEECCSC
T ss_pred             CCCceEEEEEecCCC
Confidence             45678999999873

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.87  E-value=6.9e-10  Score=96.42  Aligned_cols=76  Identities=25%  Similarity=0.423  Sum_probs=57.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCC----CCCCccceeeEEEeCCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGAL----RHRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l----~H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      +.||+|+||.||++.....+..||+|.+.....      .....+.+|+.++.++    +|+||+++++++...+..++|
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v  116 (312)
T 2iwi_A           37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV  116 (312)
T ss_dssp             EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEE
T ss_pred             eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEE
Confidence            789999999999999877789999999965421      1233466788888777    899999999999998999999


Q ss_pred             Eec-cCC
Q 045713          268 YNY-MHN  273 (274)
Q Consensus       268 ~Ey-~~~  273 (274)
                      +|| +++
T Consensus       117 ~e~~~~~  123 (312)
T 2iwi_A          117 LERPLPA  123 (312)
T ss_dssp             EECCSSE
T ss_pred             EEecCCC
Confidence            998 553

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.86  E-value=2e-09  Score=93.64  Aligned_cols=88  Identities=18%  Similarity=0.321  Sum_probs=69.9

Q ss_pred             ccChhhHHHhhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCC--CCCccceee
Q 045713          183 RFSYKDLYKATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALR--HRNLVQLHG  256 (274)
Q Consensus       183 ~~~~~el~~at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~Nlv~l~g  256 (274)
                      .+.++.+.....+|.  +.||+|+||.||++.... +..||+|.+...  .......+.+|+.++.+++  |+||+++++
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~   95 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD   95 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence            344444444444454  789999999999998864 789999999754  4556678999999999997  599999999


Q ss_pred             EEEeCCeEEEEEecc
Q 045713          257 YCRRKQELLLVYNYM  271 (274)
Q Consensus       257 ~~~~~~~~~LV~Ey~  271 (274)
                      ++...+..+||||+.
T Consensus        96 ~~~~~~~~~lv~e~~  110 (313)
T 3cek_A           96 YEITDQYIYMVMECG  110 (313)
T ss_dssp             EEECSSEEEEEECCC
T ss_pred             EeecCCEEEEEEecC
Confidence            999999999999954

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.86  E-value=5.4e-09  Score=89.84  Aligned_cols=72  Identities=18%  Similarity=0.255  Sum_probs=63.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||+|.+....  ....+.+|+.++.++ +|+|++++++++......++||||+
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A           16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            78999999999999987778999999986542  234578899999998 7999999999999999999999998

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.86  E-value=2.8e-09  Score=96.20  Aligned_cols=71  Identities=31%  Similarity=0.513  Sum_probs=57.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCe------EEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQE------LLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~------~~LV~Ey~  271 (274)
                      +.||+|+||.||++..... ..+|+|++.....    ...+|+.+|..++|+||++++++|...+.      ++|||||+
T Consensus        46 ~~lG~G~~g~V~~a~~~~~-~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~  120 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVES-DEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV  120 (394)
T ss_dssp             EEEEEETTEEEEEEEETTT-EEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred             EEEeeCCCeEEEEEEECCC-CeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence            7899999999999998764 4589998865422    12369999999999999999999976443      78999999


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      ++
T Consensus       121 ~~  122 (394)
T 4e7w_A          121 PE  122 (394)
T ss_dssp             SE
T ss_pred             Cc
Confidence            75

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.85  E-value=1e-08  Score=89.86  Aligned_cols=72  Identities=38%  Similarity=0.589  Sum_probs=56.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHH--hcCCCCCCccceeeEEEe-----CCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVS--MGALRHRNLVQLHGYCRR-----KQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~--l~~l~H~Nlv~l~g~~~~-----~~~~~LV~Ey  270 (274)
                      +.||+|+||.||+|...  +..||||.+....   ...+..|.++  +..++|+||+++++++..     ...++|||||
T Consensus        19 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~   93 (336)
T 3g2f_A           19 ELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY   93 (336)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred             eecccCCCeEEEEEEEC--CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence            78999999999999874  7899999997543   3344445444  556899999999987653     2257899999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +++|
T Consensus        94 ~~~g   97 (336)
T 3g2f_A           94 YPNG   97 (336)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9876

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.83  E-value=9.4e-09  Score=90.57  Aligned_cols=73  Identities=21%  Similarity=0.225  Sum_probs=57.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~Ey~~~  273 (274)
                      ++||+|+||.||++.....+..||+|.+... ....+++.   ..+..++|+||+++++++..    ...++|||||+++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~e~~---~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g  110 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PKARQEVD---HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG  110 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESS-HHHHHHHH---HHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HHHHHHHH---HHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence            4699999999999999888999999999654 22222322   23455689999999999876    3458999999987


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus       111 g  111 (336)
T 3fhr_A          111 G  111 (336)
T ss_dssp             E
T ss_pred             C
Confidence            5

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.83  E-value=6.7e-09  Score=92.42  Aligned_cols=74  Identities=20%  Similarity=0.313  Sum_probs=57.9

Q ss_pred             ceeeeccCceEEEEEEcCC-----CceEEEEEEccCCHHh-----------HHHHHHHHHHhcCCCCCCccceeeEEEeC
Q 045713          198 ELIGKGGFGKVYKGVLSTS-----GLPIAVKKISHDSEQW-----------MKEFVSEIVSMGALRHRNLVQLHGYCRRK  261 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-----g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~  261 (274)
                      +.||+|+||.||++....+     +..||||.+.......           ...++.|+..+..++|+||++++++|...
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~  120 (364)
T 3op5_A           41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD  120 (364)
T ss_dssp             EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred             EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence            7899999999999998653     4789999997654221           12345677778899999999999999764


Q ss_pred             ----CeEEEEEecc
Q 045713          262 ----QELLLVYNYM  271 (274)
Q Consensus       262 ----~~~~LV~Ey~  271 (274)
                          ...+|||||+
T Consensus       121 ~~~~~~~~lv~e~~  134 (364)
T 3op5_A          121 KNGKSYRFMIMDRF  134 (364)
T ss_dssp             ETTEEEEEEEEECE
T ss_pred             cCCcceEEEEEeCC
Confidence                3479999998

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.83  E-value=5.1e-10  Score=97.40  Aligned_cols=74  Identities=32%  Similarity=0.604  Sum_probs=63.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....   .+|+|.+...  .....+.|.+|+.++.+++|+||++++++|...+..++|+||+++|
T Consensus        39 ~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~  114 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR  114 (319)
T ss_dssp             CBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred             eEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence            789999999999999853   5999998754  2233456888999999999999999999999999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.83  E-value=4.3e-09  Score=96.21  Aligned_cols=71  Identities=21%  Similarity=0.233  Sum_probs=59.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ++||+|+||+||..... .|..||||++....   .+.+.+|+.++.++ +||||+++++++...+.++||||||.
T Consensus        21 ~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           21 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             EEEEECSTTCEEEEEES-SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             CeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            68999999999765443 48999999986532   34678899999876 89999999999999999999999985

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.82  E-value=5.9e-09  Score=92.10  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=56.1

Q ss_pred             ceeeeccCceEEEEEEcC---CCceEEEEEEccCCHH-----------hHHHHHHHHHHhcCCCCCCccceeeEEEe---
Q 045713          198 ELIGKGGFGKVYKGVLST---SGLPIAVKKISHDSEQ-----------WMKEFVSEIVSMGALRHRNLVQLHGYCRR---  260 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~---~g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~---  260 (274)
                      +.||+|+||.||++....   .+..+|+|.+......           ....+.+|+..+..++|+||+++++++..   
T Consensus        43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~  122 (345)
T 2v62_A           43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK  122 (345)
T ss_dssp             EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred             eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence            789999999999999875   5788999999765321           12347788899999999999999999988   


Q ss_pred             -CCeEEEEEecc
Q 045713          261 -KQELLLVYNYM  271 (274)
Q Consensus       261 -~~~~~LV~Ey~  271 (274)
                       ....+|||||+
T Consensus       123 ~~~~~~lv~e~~  134 (345)
T 2v62_A          123 GRSYRFMVMERL  134 (345)
T ss_dssp             SCEEEEEEEECE
T ss_pred             CCcEEEEEEecc
Confidence             67889999998

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.80  E-value=1e-08  Score=89.49  Aligned_cols=74  Identities=23%  Similarity=0.421  Sum_probs=62.6

Q ss_pred             ceeeeccCceEEEEEE-cCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCC------CccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVL-STSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHR------NLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~------Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.. ...+..||+|.++.. ....+.+.+|+.++.+++|+      +++++++++...+..+|||||
T Consensus        20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   98 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL   98 (339)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence            7899999999999987 456789999999754 34456788898888877665      499999999999999999999


Q ss_pred             cC
Q 045713          271 MH  272 (274)
Q Consensus       271 ~~  272 (274)
                      +.
T Consensus        99 ~~  100 (339)
T 1z57_A           99 LG  100 (339)
T ss_dssp             CC
T ss_pred             CC
Confidence            94

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.80  E-value=1.1e-08  Score=91.75  Aligned_cols=81  Identities=23%  Similarity=0.364  Sum_probs=66.1

Q ss_pred             hhcCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CC-----CccceeeEEEeCCe
Q 045713          192 ATKGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HR-----NLVQLHGYCRRKQE  263 (274)
Q Consensus       192 at~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----Nlv~l~g~~~~~~~  263 (274)
                      ...+|.  +.||+|+||.||++.....+..||||.++.. .....++..|+.++..++ |+     +++++.+++...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            344555  7899999999999999878899999999753 334567778888877764 44     49999999999999


Q ss_pred             EEEEEeccCC
Q 045713          264 LLLVYNYMHN  273 (274)
Q Consensus       264 ~~LV~Ey~~~  273 (274)
                      .+|||||+++
T Consensus       131 ~~lv~e~~~~  140 (382)
T 2vx3_A          131 LCLVFEMLSY  140 (382)
T ss_dssp             EEEEEECCCC
T ss_pred             eEEEEecCCC
Confidence            9999999964

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.79  E-value=4e-09  Score=93.37  Aligned_cols=69  Identities=13%  Similarity=0.144  Sum_probs=58.2

Q ss_pred             ceeeeccCceEEEEEEcC--------CCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccc---------------e
Q 045713          198 ELIGKGGFGKVYKGVLST--------SGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQ---------------L  254 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~--------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~---------------l  254 (274)
                      +.||+|+||.||++....        .+..||+|.+...     +.+.+|+.++.+++|+||++               +
T Consensus        48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~  122 (352)
T 2jii_A           48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC  122 (352)
T ss_dssp             EEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred             EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence            789999999999999875        3789999999754     36788999999999999988               6


Q ss_pred             eeEEEe-CCeEEEEEecc
Q 045713          255 HGYCRR-KQELLLVYNYM  271 (274)
Q Consensus       255 ~g~~~~-~~~~~LV~Ey~  271 (274)
                      ++++.. .+..+|||||+
T Consensus       123 ~~~~~~~~~~~~lv~e~~  140 (352)
T 2jii_A          123 MGFGVHQDKYRFLVLPSL  140 (352)
T ss_dssp             CEEEEETTTEEEEEEECC
T ss_pred             hhccccCCcEEEEEecCC
Confidence            788876 67889999998

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.77  E-value=1.6e-08  Score=90.16  Aligned_cols=74  Identities=9%  Similarity=-0.006  Sum_probs=50.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHH---HHHhcCCCCCCcccee-------eEEEeC---
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSE---IVSMGALRHRNLVQLH-------GYCRRK---  261 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E---~~~l~~l~H~Nlv~l~-------g~~~~~---  261 (274)
                      +.||+|+||.||++.....+..||+|.+....   ....+.+.+|   +..|.+ +||||++++       +++...   
T Consensus        68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~  146 (371)
T 3q60_A           68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQP  146 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSC
T ss_pred             eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCC
Confidence            78999999999999998788999999998753   2334567777   456666 799977744       555443   


Q ss_pred             --------------CeEEEEEeccC
Q 045713          262 --------------QELLLVYNYMH  272 (274)
Q Consensus       262 --------------~~~~LV~Ey~~  272 (274)
                                    ..++||||||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~lv~e~~~  171 (371)
T 3q60_A          147 PFAQLSPGQDDYAVANYLLLMPAAS  171 (371)
T ss_dssp             SSSBCSCC---CCEEEEEEEECCCS
T ss_pred             CeeeccCCcccceeeeEEEEecCCC
Confidence                          23799999987

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.75  E-value=7.6e-09  Score=97.28  Aligned_cols=75  Identities=13%  Similarity=0.177  Sum_probs=56.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---H-----HhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---E-----QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~-----~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      ++||+|+||.||++...  +..+++|......   .     ...+.|.+|+.+|.+++|+||+++..++...+..+||||
T Consensus       342 ~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             ------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            68999999999999654  6889999875431   1     124568999999999999999988888888888999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus       420 ~~~gg  424 (540)
T 3en9_A          420 YINGK  424 (540)
T ss_dssp             CCCSE
T ss_pred             CCCCC
Confidence            99875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.74  E-value=9.4e-09  Score=93.98  Aligned_cols=70  Identities=17%  Similarity=0.277  Sum_probs=58.2

Q ss_pred             ceeeeccCceEE-EEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVY-KGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy-~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ++||+|+||.|+ ++..  .+..||||++.....   ..+.+|+.+|.++ +|||||++++++...+..+||||||.
T Consensus        30 ~~LG~G~~G~V~~~~~~--~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           30 DVLGHGAEGTIVYRGMF--DNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             EEEEECGGGCEEEEEES--SSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CeeecCcCEEEEEEEEe--CCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            789999999954 4443  378999999965432   2356799999988 89999999999999999999999986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.71  E-value=3.4e-08  Score=84.68  Aligned_cols=72  Identities=18%  Similarity=0.289  Sum_probs=60.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEE-EeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC-RRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~-~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||+|.+.....  ..++.+|+.++.+++|+|++..+++| ...+..++||||+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            789999999999999877789999999875432  23688999999999999888777776 5567789999999

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.71  E-value=1.9e-08  Score=89.32  Aligned_cols=73  Identities=16%  Similarity=0.293  Sum_probs=62.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-----------CCCccceeeEEEeCC----
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-----------HRNLVQLHGYCRRKQ----  262 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~Nlv~l~g~~~~~~----  262 (274)
                      +.||+|+||.||++.....+..||+|.+... ......+.+|+.++.+++           |+||+++++++...+    
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  103 (373)
T 1q8y_A           25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV  103 (373)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence            7899999999999998878899999999753 344567889999988776           899999999997654    


Q ss_pred             eEEEEEecc
Q 045713          263 ELLLVYNYM  271 (274)
Q Consensus       263 ~~~LV~Ey~  271 (274)
                      .+++||||+
T Consensus       104 ~~~lv~e~~  112 (373)
T 1q8y_A          104 HVVMVFEVL  112 (373)
T ss_dssp             EEEEEECCC
T ss_pred             eEEEEEecC
Confidence            689999998

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.71  E-value=2.8e-08  Score=87.35  Aligned_cols=75  Identities=17%  Similarity=0.329  Sum_probs=63.6

Q ss_pred             ceeeeccCceEEEEEEcCCC-ceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCC------ccceeeEEEeCCeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSG-LPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN------LVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N------lv~l~g~~~~~~~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....+ ..||+|.++.. ....+.+.+|+.++.+++|+|      ++.+.+++...+..+|||||
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  103 (355)
T 2eu9_A           25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL  103 (355)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred             EEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence            78999999999999986555 68999999754 344567888999998887766      89999999999999999999


Q ss_pred             cCC
Q 045713          271 MHN  273 (274)
Q Consensus       271 ~~~  273 (274)
                      +.+
T Consensus       104 ~~~  106 (355)
T 2eu9_A          104 LGK  106 (355)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            954

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.69  E-value=3.6e-08  Score=84.98  Aligned_cols=72  Identities=13%  Similarity=0.091  Sum_probs=57.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------------------HhHHHHHHHHHHhcCCCCCCccceeeEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------------------QWMKEFVSEIVSMGALRHRNLVQLHGYCR  259 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~  259 (274)
                      +.||+|+||.||++.. .+|..||+|.++....                  .....+.+|+.+|.+++  | +++.+++.
T Consensus        96 ~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~  171 (282)
T 1zar_A           96 KLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA  171 (282)
T ss_dssp             EEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred             CEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence            7899999999999999 5689999999964321                  23567999999999999  5 77777654


Q ss_pred             eCCeEEEEEeccCCC
Q 045713          260 RKQELLLVYNYMHNK  274 (274)
Q Consensus       260 ~~~~~~LV~Ey~~~G  274 (274)
                       .+..++|||||++|
T Consensus       172 -~~~~~lvmE~~~g~  185 (282)
T 1zar_A          172 -WEGNAVLMELIDAK  185 (282)
T ss_dssp             -EETTEEEEECCCCE
T ss_pred             -ccceEEEEEecCCC
Confidence             35569999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.69  E-value=5.8e-09  Score=91.19  Aligned_cols=76  Identities=25%  Similarity=0.507  Sum_probs=64.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCCC--CCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGALR--HRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~--H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++.....+..||||.+.....      .....+.+|+.++.+++  |+|++++++++...+..++|+|
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e  128 (320)
T 3a99_A           49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE  128 (320)
T ss_dssp             EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence            789999999999999887889999999975421      12245778999999886  5999999999999999999999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+..
T Consensus       129 ~~~~  132 (320)
T 3a99_A          129 RPEP  132 (320)
T ss_dssp             CCSS
T ss_pred             cCCC
Confidence            9864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.68  E-value=3.9e-08  Score=84.27  Aligned_cols=72  Identities=18%  Similarity=0.289  Sum_probs=59.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEE-EeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC-RRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~-~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||+|.+.....  ..++.+|+.++.+++|+|++..+++| ...+..++||||+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             eeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            789999999999999877889999998765422  23578899999999999888877776 5567789999999

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=98.62  E-value=3.6e-08  Score=83.75  Aligned_cols=63  Identities=19%  Similarity=0.309  Sum_probs=51.5

Q ss_pred             CCCcEEEEEEee-CCCcEEEEEEEeCCCCCCCCCeeeeecCcccc-cccce-eEeEEeeec---CcccceeEeccccccc
Q 045713           22 SGNPMQIWIDYN-GEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQI-LLDTM-HVGFSASTG---ILTSNQYILGWSFSRI   95 (274)
Q Consensus        22 ~g~~~~awi~y~-~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~-l~~~~-~vGfsastg---~~~~~~~i~~WsF~s~   95 (274)
                      +|.++++||+|+ +..+.|+|.+.+       +.    -+++..+ ||+++ |+||||+||   ...+.|.|++|+|...
T Consensus       160 ~~~~~~v~I~Y~~~~~~~L~V~i~~-------~~----c~~~~~v~LP~~~~~~GfSAaTG~~~~~~d~hdIls~~~~~~  228 (256)
T 2a6y_A          160 SSVPSTIRVTYDLEDDNLLKVQVDN-------KV----CFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFNG  228 (256)
T ss_dssp             CSSCEEEEEEEEGGGTSEEEEEETT-------EE----EEEESCEECCSEEEEEEEEEECCSGGGCCCEEEEEEEEEEES
T ss_pred             CCCcEEEEEEEecCCCcEEEEEEcC-------EE----EEEECcEEeCCCCeEEEEEEeCCCCCCCcceEEEEEEEEEec
Confidence            688999999999 888999999854       11    2333444 78887 699999999   8899999999999873

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.57  E-value=1.3e-07  Score=87.69  Aligned_cols=72  Identities=18%  Similarity=0.281  Sum_probs=59.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCC-CccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHR-NLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~-Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||++.....+..||||.+.....  ..++..|+.++..++|. ++..+..++...+..+|||||+
T Consensus        13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A           13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            789999999999999877789999998865422  23578899999999875 5555666667788899999999

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.39  E-value=2.9e-07  Score=87.05  Aligned_cols=75  Identities=15%  Similarity=-0.059  Sum_probs=53.6

Q ss_pred             eeeccCceEEEEEEcCCCceEEEEEEccC----------CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          200 IGKGGFGKVYKGVLSTSGLPIAVKKISHD----------SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       200 lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~----------~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      .+.|++|.+.++.-..-|..+|+|.+...          .....++|.+|+++|.++ .|+||+++++++.+.+.+||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            45555555554433333788999999653          123456899999999999 7999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      ||+++|
T Consensus       322 Eyv~G~  327 (569)
T 4azs_A          322 EKLPGR  327 (569)
T ss_dssp             ECCCSE
T ss_pred             ecCCCC
Confidence            999975

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.15  E-value=1.7e-06  Score=73.38  Aligned_cols=71  Identities=17%  Similarity=0.196  Sum_probs=52.1

Q ss_pred             ceeeeccCceEEEEEEcCCCce--EEEEEEccCCH------------------------HhHHHHHHHHHHhcCCCCCCc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLP--IAVKKISHDSE------------------------QWMKEFVSEIVSMGALRHRNL  251 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~--vAvK~l~~~~~------------------------~~~~~f~~E~~~l~~l~H~Nl  251 (274)
                      +.||+|+||.||+|.....|..  ||||.++....                        .....+.+|+..|.+++|+|+
T Consensus        53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i  132 (258)
T 1zth_A           53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV  132 (258)
T ss_dssp             EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence            7899999999999998445788  99998754311                        112368899999999988864


Q ss_pred             --cceeeEEEeCCeEEEEEeccC
Q 045713          252 --VQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       252 --v~l~g~~~~~~~~~LV~Ey~~  272 (274)
                        ..++.+    +..+|||||+.
T Consensus       133 ~~p~~~~~----~~~~lVmE~~g  151 (258)
T 1zth_A          133 SVPQPYTY----MKNVLLMEFIG  151 (258)
T ss_dssp             CCCCEEEE----ETTEEEEECCE
T ss_pred             CCCeEEEc----CCCEEEEEecC
Confidence              333332    35689999994

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.91  E-value=1e-05  Score=73.20  Aligned_cols=51  Identities=14%  Similarity=0.172  Sum_probs=42.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRH  248 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H  248 (274)
                      ++||+|+||.||++.....|..||||++....   ....+.|.+|+.++..++|
T Consensus        84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            78999999999999988789999999997442   2335779999999999987

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.57  E-value=1.5e-05  Score=71.58  Aligned_cols=29  Identities=17%  Similarity=0.051  Sum_probs=25.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEcc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISH  227 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~  227 (274)
                      ..||+|+||.||+|... .|..||||.++.
T Consensus       101 ~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~  129 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADE-KGKQKVLKIHRL  129 (397)
T ss_dssp             EEEEECSSEEEEEEECT-TCCEEEEEEECT
T ss_pred             CEeeeCCceEEEEEECC-CCCEEEEEEEec
Confidence            78999999999999886 489999998753

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=97.34  E-value=0.00021  Score=59.12  Aligned_cols=61  Identities=20%  Similarity=0.340  Sum_probs=45.2

Q ss_pred             CCCcEEEEEEee-CCCcEEEEEEEeCCCCCCCCCeee-eecCcccccccc-eeEeEEeeec---CcccceeEeccccc
Q 045713           22 SGNPMQIWIDYN-GEEKLLNVTLAPIRVSKPNRPLLS-TPLDLSQILLDT-MHVGFSASTG---ILTSNQYILGWSFS   93 (274)
Q Consensus        22 ~g~~~~awi~y~-~~~~~l~v~~~~~~~~~~~~~~ls-~~~dl~~~l~~~-~~vGfsastg---~~~~~~~i~~WsF~   93 (274)
                      ++.+.+++|+|+ ...+.|+|.+..       +..+. ..++    ||+. .|+||||+||   ...+.|.|++|.+.
T Consensus       153 ~~~~~~~rI~Y~~~~~~~l~v~id~-------~~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d~hdil~~~~~  219 (222)
T 2a6z_A          153 SSVPSTIRVTYDLEDDNLLKVQVDN-------KVCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAESFEIFKMQFF  219 (222)
T ss_dssp             EEEEEEEEEEEEGGGTSEEEEEETT-------EEEEEESCCC----CCSSEEEEEEEEECCSGGGCCCEEEEEEEEEE
T ss_pred             CCCcEEEEEEEEcCCCcEEEEEEcC-------eEEEEeCCee----cCCCCcEEEEEEcCCCCCCCCccEEEEEEEEE
Confidence            456789999999 667889998842       12222 2244    4555 4799999999   88899999999875

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.76  E-value=0.0025  Score=53.24  Aligned_cols=74  Identities=15%  Similarity=-0.040  Sum_probs=56.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ..++.|+.+.||+....  +..+++|............+.+|..++..+. |.++.++++++...+..++||||+++
T Consensus        20 ~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   94 (263)
T 3tm0_A           20 KDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             ECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             eeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence            45667777889998754  6789999986521112335788888888774 67788899999988899999999986

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.45  E-value=0.0026  Score=52.65  Aligned_cols=72  Identities=10%  Similarity=0.006  Sum_probs=52.2

Q ss_pred             ceee-eccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCC--ccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIG-KGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN--LVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG-~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N--lv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      ..++ .|..+.||+.... +|..+++|......   ...+.+|+.++..+++.+  +.++++++...+..++||||+++
T Consensus        25 ~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G   99 (264)
T 1nd4_A           25 AQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   99 (264)
T ss_dssp             EECSCTTSSCEEEEEECT-TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EecccCCCCceEEEEecC-CCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence            4455 4445899999764 46789999876541   235677888888775545  44588888877788999999986

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=94.72  E-value=0.026  Score=49.42  Aligned_cols=74  Identities=14%  Similarity=0.209  Sum_probs=51.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEc--cCC-HHhHHHHHHHHHHhcCCC--CCCccceeeEEEeC---CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKIS--HDS-EQWMKEFVSEIVSMGALR--HRNLVQLHGYCRRK---QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~--~~~-~~~~~~f~~E~~~l~~l~--H~Nlv~l~g~~~~~---~~~~LV~E  269 (274)
                      +.++.|.++.||+....  +..+.+|+..  ... ......+.+|..++..++  +.++.+++++|...   +..++|||
T Consensus        44 ~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            57889999999998875  4577888765  321 122346778888888776  45678899998766   44799999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+++
T Consensus       122 ~v~G  125 (359)
T 3dxp_A          122 FVSG  125 (359)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9985

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=94.12  E-value=0.12  Score=42.53  Aligned_cols=61  Identities=21%  Similarity=0.311  Sum_probs=42.9

Q ss_pred             CCCcEEEEEEee-CCCcEEEEEEEeCCCCCCCCCeeee-ecCcccccccc--eeEeEEeeecCcccceeEeccccc
Q 045713           22 SGNPMQIWIDYN-GEEKLLNVTLAPIRVSKPNRPLLST-PLDLSQILLDT--MHVGFSASTGILTSNQYILGWSFS   93 (274)
Q Consensus        22 ~g~~~~awi~y~-~~~~~l~v~~~~~~~~~~~~~~ls~-~~dl~~~l~~~--~~vGfsastg~~~~~~~i~~WsF~   93 (274)
                      .+.+.++.|.|+ ...+.|.|.+..       +..+.. .|+|    |+.  .|+||||+||...+.|.|++..+.
T Consensus       154 ~~~~t~~ri~Y~~~~~~~l~v~id~-------~~Cf~~~~v~L----P~g~~~yfGiSAaTg~~~D~hdils~~~~  218 (226)
T 2a6v_A          154 SMVPSTLRLTYNPLDNHLLKLQMDN-------RVCFQTRKVKF----MGSSPFRIGTSAINDASKESFEILKMKLY  218 (226)
T ss_dssp             CSSCEEEEEEEEGGGTSEEEEEETT-------EEEEEESCCCG----GGTSCBEEEEEEECCTTCCEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEccCCCEEEEEEcC-------CeeEEECCeec----CCCCccEEEEEEcCCCCcccEEEEEEEEE
Confidence            346789999997 456789888731       123331 2333    444  499999999999999999887654

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=93.87  E-value=0.007  Score=55.48  Aligned_cols=60  Identities=13%  Similarity=0.245  Sum_probs=17.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEE------EEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAV------KKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR  260 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAv------K~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~  260 (274)
                      +.||   ||.||+|.+......|||      |.....  +.+...+|.+|..++..++|+|+++..++...
T Consensus       148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            5666   999999999754468899      777653  33445689999999999999999999887654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.29  E-value=0.46  Score=39.24  Aligned_cols=76  Identities=14%  Similarity=0.215  Sum_probs=55.2

Q ss_pred             Ccc-ceeeeccCc-eEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEecc
Q 045713          195 GFK-ELIGKGGFG-KVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       195 ~f~-~~lG~G~fG-~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ++. +.+..|..| .||+-....++..+.+|+-...   ...++.+|...|..+. +--+-+++++|...+..++|||++
T Consensus        26 g~~~~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l  102 (272)
T 4gkh_A           26 GYRWARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI  102 (272)
T ss_dssp             TCEEEEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             CCeEEEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence            444 556667666 5898877666678889986543   3456778888877663 334667889999999999999998


Q ss_pred             CC
Q 045713          272 HN  273 (274)
Q Consensus       272 ~~  273 (274)
                      ++
T Consensus       103 ~G  104 (272)
T 4gkh_A          103 PG  104 (272)
T ss_dssp             CS
T ss_pred             CC
Confidence            75

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.41  E-value=0.21  Score=42.04  Aligned_cols=71  Identities=20%  Similarity=0.294  Sum_probs=48.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCC---CccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHR---NLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.+|.|..+.||+-.+.+ |+.+.+|+-..........|.+|...|..|.-.   -+.+.++++    .-++||||++.
T Consensus        21 ~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~   94 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred             EecCCCCCeEEEEEEECC-CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence            578999999999999975 788999986544333234577888877766321   233444442    23788999865

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=92.24  E-value=0.097  Score=46.39  Aligned_cols=74  Identities=12%  Similarity=0.091  Sum_probs=46.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH-------HhHHHHHHHHHHhcCCCC--CCcc-ceeeEEEeCCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE-------QWMKEFVSEIVSMGALRH--RNLV-QLHGYCRRKQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~Nlv-~l~g~~~~~~~~~LV  267 (274)
                      +.+|.|.++.||+......+..+++|.......       .....+..|..++..+.+  +..+ +++.+  ..+..++|
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv  113 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  113 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence            578999999999997654567899998653211       112345667777766532  3334 45543  34556899


Q ss_pred             EeccCC
Q 045713          268 YNYMHN  273 (274)
Q Consensus       268 ~Ey~~~  273 (274)
                      |||+++
T Consensus       114 mE~l~g  119 (397)
T 2olc_A          114 MEDLSH  119 (397)
T ss_dssp             ECCCTT
T ss_pred             EEeCCC
Confidence            999864

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=91.68  E-value=0.005  Score=56.66  Aligned_cols=32  Identities=19%  Similarity=0.018  Sum_probs=26.0

Q ss_pred             HhHHHHHHHHHHhcCCCCCCccceeeEEEeCC
Q 045713          231 QWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ  262 (274)
Q Consensus       231 ~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~  262 (274)
                      ++.++|.+|++.+++++|+|||+|+|||....
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            44678999999999999999999999997654

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=90.13  E-value=0.024  Score=33.85  Aligned_cols=25  Identities=16%  Similarity=0.429  Sum_probs=10.5

Q ss_pred             EehhhhhhhHHHHHhhhh-eeeeeeh
Q 045713          141 IVFPIVAVFAVALITISG-AIYIVQK  165 (274)
Q Consensus       141 i~~~~~~~~~~~~~~~~~-~~~~~rr  165 (274)
                      |++++++.+++++++++. ++++|||
T Consensus        13 IA~gVVgGv~~~~ii~~~~~~~~RRr   38 (44)
T 2ks1_B           13 IATGMVGALLLLLVVALGIGLFMRRR   38 (44)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence            445555444443333333 3344333

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=88.77  E-value=0.038  Score=32.95  Aligned_cols=25  Identities=20%  Similarity=0.390  Sum_probs=10.4

Q ss_pred             EehhhhhhhHHHHHh-hhheeeeeeh
Q 045713          141 IVFPIVAVFAVALIT-ISGAIYIVQK  165 (274)
Q Consensus       141 i~~~~~~~~~~~~~~-~~~~~~~~rr  165 (274)
                      |+.++++.+++++++ ++.++++|||
T Consensus        12 IA~gVVgGv~~v~ii~~~~~~~~RRR   37 (44)
T 2l2t_A           12 IAAGVIGGLFILVIVGLTFAVYVRRK   37 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence            444554444443333 3333444333

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=88.52  E-value=2.4  Score=36.37  Aligned_cols=72  Identities=14%  Similarity=0.134  Sum_probs=55.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC---CCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR---HRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.|+.|.+..+|+-...  +..+.+|.....   ....|.+|...|..|.   ...+.+.++++...+..++||||++++
T Consensus        42 ~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           42 EKLYSGEMNEIWLINDE--VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEECCSSSSEEEEEESS--SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEeCCccceeeeEEEEC--CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            56889999999998763  567888887543   2456888888887763   356778899988888899999999863

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=86.98  E-value=0.034  Score=33.10  Aligned_cols=26  Identities=19%  Similarity=0.410  Sum_probs=10.0

Q ss_pred             EehhhhhhhHHHHHhhhheeeeeehh
Q 045713          141 IVFPIVAVFAVALITISGAIYIVQKK  166 (274)
Q Consensus       141 i~~~~~~~~~~~~~~~~~~~~~~rr~  166 (274)
                      |+.++++.++++++++.+.+++|||+
T Consensus        14 Ia~~vVGvll~vi~~l~~~~~~RRR~   39 (44)
T 2jwa_A           14 IISAVVGILLVVVLGVVFGILIKRRQ   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHHhheehhh
Confidence            33334443333333333344444433

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=82.60  E-value=4.2  Score=34.35  Aligned_cols=69  Identities=17%  Similarity=0.054  Sum_probs=48.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCC---CccceeeEEE-eCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHR---NLVQLHGYCR-RKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---Nlv~l~g~~~-~~~~~~LV~Ey~~~  273 (274)
                      +.++.|....||+.     |..+.+|.-.  .......+.+|..+|..+.+.   .+.+.+.++. ..+..++||||+++
T Consensus        25 ~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           25 ESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            46788888889887     4567788742  233456788999999888653   2456677765 33456899999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	274
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	1e-24
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	1e-24
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	3e-24
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	5e-24
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	1e-23
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	2e-23
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	2e-23
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	3e-23
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	4e-23
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	6e-23
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-22
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	1e-22
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	1e-22
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-22
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-22
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	5e-22
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-21
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	2e-21
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	2e-21
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	9e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-20
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-20
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	3e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-20
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	9e-20
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-19
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-19
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-18
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-17
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	3e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-16
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-16
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-16
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-15
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-15
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-12
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-12
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-09
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	3e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-07

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 97.1 bits (241), Expect = 1e-24
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
             S DL +    ++ I Y+    LL  +L     S+    +LS  +DL   L + + +GF
Sbjct: 151 TTSWDLANNKVAKVLITYDASTSLLVASLVY--PSQRTSNILSDVVDLKTSLPEWVRIGF 208

Query: 75  SASTGILTSNQ--YILGWSFSRIGEAQNLDISKL 106
           SA+TG+    +   +L WSF+      + +I  L
Sbjct: 209 SAATGLDIPGESHDVLSWSFASNLPHASSNIDPL 242

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score = 96.3 bits (239), Expect = 1e-24
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +  D ++G    + I Y    K L V L+    S     +++  +DL  IL + + VG
Sbjct: 154 KTVKWDWRNGEVADVVITYRAPTKSLTVCLSY--PSDGTSNIITASVDLKAILPEWVSVG 211

Query: 74  FSASTGILTSNQ--YILGWSFS 93
           FS   G     +   +L W F+
Sbjct: 212 FSGGVGNAAEFETHDVLSWYFT 233

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score = 95.6 bits (237), Expect = 3e-24
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +  D + G  + + + +N   + L+V       S   R  +S  +D+  +L + + VG
Sbjct: 158 KTVKWDRRDGQSLNVLVTFNPSTRNLDVVATY---SDGTRYEVSYEVDVRSVLPEWVRVG 214

Query: 74  FSASTGILTSNQYILGWSFS 93
           FSA++G       +  WSF+
Sbjct: 215 FSAASGEQYQTHTLESWSFT 234

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score = 95.1 bits (236), Expect = 5e-24
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 13  GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHV 72
                 D+ SG      I Y+G  ++L V L+       +  +LS  +D+ Q L +++ V
Sbjct: 155 KRWEDSDIFSGKIATARISYDGSAEILTVVLSY---PDGSDYILSHSVDMRQNLPESVRV 211

Query: 73  GFSASTGILTS-NQYILGWSFS 93
           G SASTG       YIL W FS
Sbjct: 212 GISASTGNNQFLTVYILSWRFS 233

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score = 94.0 bits (233), Expect = 1e-23
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 17  SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSA 76
              L +G    + I Y+   K+L+V L     S      ++  +D+ Q+L D + VG S 
Sbjct: 157 PFQLDNGQVANVVIKYDAPSKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGLSG 214

Query: 77  STGI---LTSNQYILGWSFS 93
           +TG          +  WSF 
Sbjct: 215 ATGAQRDAAETHDVYSWSFQ 234

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score = 93.6 bits (232), Expect = 2e-23
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 9/101 (8%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
             S  L +G   +I I YN    LL  +L     S+    ++S  +D++  L + + +GF
Sbjct: 151 TASWGLANGQNAEILITYNAATSLLVASLVH--PSRRTSYIVSERVDITNELPEYVSIGF 208

Query: 75  SASTGI---LTSNQYILGWSFS----RIGEAQNLDISKLPI 108
           SA+TG+    T    +L WSF+         + LDI+   +
Sbjct: 209 SATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLV 249

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score = 93.2 bits (231), Expect = 2e-23
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDT--MH 71
             +   L++G    + I Y+   K+LNV LA    S      LS  +DL Q   ++  ++
Sbjct: 149 KTLHFQLENGGVANVVIKYDSPTKILNVVLAF--HSVGTVYTLSNIVDLKQEFPNSEWVN 206

Query: 72  VGFSASTGI---LTSNQYILGWSFS 93
           VG SA+TG          I+ WSF+
Sbjct: 207 VGLSATTGYQKNAVETHEIISWSFT 231

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 92.7 bits (230), Expect = 4e-23
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
                ++Q+G      I YN  +K L+  ++       +   +S  +DL  +L + + VG
Sbjct: 36  KTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSY---PNADSATVSYDVDLDNVLPEWVRVG 92

Query: 74  FSASTGILTSNQYILGWSFS 93
            SASTG+      IL WSF+
Sbjct: 93  LSASTGLYKETNTILSWSFT 112

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score = 91.8 bits (227), Expect = 6e-23
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 10  SDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDT 69
                N      +G    + I Y+     L V L         +  +S  + L + + + 
Sbjct: 140 PYVNENCDFHKYNGEKTDVQITYDSSNNDLRVFLHF--TVSQVKCSVSATVHLEKEVDEW 197

Query: 70  MHVGFSASTGILTSN---QYILGWSFS 93
           + VGFS ++G+         +L WSFS
Sbjct: 198 VSVGFSPTSGLTEDTTETHDVLSWSFS 224

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.9 bits (230), Expect = 1e-22
 Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 15/105 (14%)

Query: 184 FSYKDLYKATKGF-----------KELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD- 228
           F+++D  +A + F           +++IG G FG+V  G L   G   + +A+K +    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 229 SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +E+  ++F+SE   MG   H N++ L G   +   ++++  +M N
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN 111

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score = 90.9 bits (225), Expect = 1e-22
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 13  GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHV 72
                 D+  G    I I Y    K L  +L            +S  +DL  IL + + V
Sbjct: 148 KKTTPFDMVYGEKANIVITYQASTKALAASLVF--PVSQTSYAVSARVDLRDILPEYVRV 205

Query: 73  GFSASTGI---LTSNQYILGWSFS 93
           GFSA+TG+   +     I+ WSF+
Sbjct: 206 GFSATTGLNAGVVETHDIVSWSFA 229

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score = 90.9 bits (225), Expect = 1e-22
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +   L +G    + I Y+   K+L+V L     S      ++  +DL Q+L ++++VG
Sbjct: 148 KTVPFTLDNGGIANVVIKYDASTKILHVVLVF--PSLGTIYTIADIVDLKQVLPESVNVG 205

Query: 74  FSASTG-------ILTSNQYILGWSFS 93
           FSA+TG         T    IL WSFS
Sbjct: 206 FSAATGDPSGKQRNATETHDILSWSFS 232

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 90.5 bits (224), Expect = 2e-22
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 10  SDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDT 69
                + +    +G   ++ I Y+  +  L V+L     S   +  +S  + L + + D 
Sbjct: 138 PIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLLY--PSSEEKCHVSATVPLEKEVEDW 195

Query: 70  MHVGFSASTGIL---TSNQYILGWSFS 93
           + VGFSA++G     T    +L WSFS
Sbjct: 196 VSVGFSATSGSKKETTETHNVLSWSFS 222

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 92.4 bits (229), Expect = 2e-22
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 166 KKYEELYEDWESEYGPQRFSYK-----DLYKATKGFKELIGKGGFGKVYKGVLSTSGLPI 220
             Y++ YED   +Y PQ    K     D Y       E +G G FG V++ V   +G   
Sbjct: 2   NDYDKFYEDIWKKYVPQPVEVKQGSVYDYYD----ILEELGSGAFGVVHRCVEKATGRVF 57

Query: 221 AVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
             K I+           +EI  M  L H  L+ LH     K E++L+  ++  
Sbjct: 58  VAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 110

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score = 89.8 bits (222), Expect = 5e-22
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 17  SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSA 76
           + D    +     I Y+   K+L V L+          +LS  +DL+++L   + +GFSA
Sbjct: 163 NDDAYGSSIATAHITYDARSKILTVLLSY---EHGRDYILSHVVDLAKVLPQKVRIGFSA 219

Query: 77  STGILTSNQYILGWSFS 93
             G      YIL W F 
Sbjct: 220 GVG-YDEVTYILSWHFF 235

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 88.2 bits (218), Expect = 1e-21
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
               D  +G   ++ I Y+    LL  +L     S+    ++S  +DL  +L + + VGF
Sbjct: 150 TTRWDFVNGENAEVLITYDSSTNLLVASLVY--PSQKTSFIVSDTVDLKSVLPEWVSVGF 207

Query: 75  SASTGILTSN---QYILGWSFS 93
           SA+TGI   N     +L WSF+
Sbjct: 208 SATTGINKGNVETNDVLSWSFA 229

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 87.1 bits (215), Expect = 2e-21
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 13  GSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHV 72
                +    G   ++ I YN   K+ +V+L+    S      +ST ++L + + D + V
Sbjct: 120 SVPWDVHDYDGQNAEVRITYNSSTKVFSVSLSNP--STGKSNNVSTTVELEKEVYDWVSV 177

Query: 73  GFSASTGILTSN---QYILGWSFS 93
           GFSA++G    +     +L WSFS
Sbjct: 178 GFSATSGAYQWSYETHDVLSWSFS 201

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score = 87.9 bits (217), Expect = 2e-21
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 10  SDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDT 69
           S      +      N   + I Y    K L  +L     S      +++ +DL +IL + 
Sbjct: 152 SINAERWNKRYGLNNVANVEIIYEASSKTLTASLTY--PSDQTSISVTSIVDLKEILPEW 209

Query: 70  MHVGFSASTGI-LTSNQYILGWSFS 93
           + VGFS ST I   +   +L W F+
Sbjct: 210 VSVGFSGSTYIGRQATHEVLNWYFT 234

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.7 bits (214), Expect = 1e-20
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 13/102 (12%)

Query: 172 YEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ 231
           Y+ WE           D+       K  +G G +G+VY+GV     L +AVK +  D+ +
Sbjct: 9   YDKWE-------MERTDIT-----MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 56

Query: 232 WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            ++EF+ E   M  ++H NLVQL G C R+    ++  +M  
Sbjct: 57  -VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 97

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 2e-20
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           F + IG G FG V+ G        +A+K I  +     ++F+ E   M  L H  LVQL+
Sbjct: 9   FVQEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 66

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C  +  + LV+ +M +
Sbjct: 67  GVCLEQAPICLVFEFMEH 84

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score = 84.8 bits (209), Expect = 3e-20
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 14  SNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVG 73
             +  +  SG  +++ + Y+   K L+V +        +   ++  +DL   L + +  G
Sbjct: 149 KTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTND---NGDITTIAQVVDLKAKLPERVKFG 205

Query: 74  FSASTGIL-TSNQYILGWSFS 93
           FSAS  +       I  WSF+
Sbjct: 206 FSASGSLGGRQIHLIRSWSFT 226

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 86.7 bits (214), Expect = 3e-20
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 168 YEELYEDWESEYGPQRFSYK-----DLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAV 222
           Y+    D   +Y PQ    K     D Y       E +G G FG V++     +G   A 
Sbjct: 1   YDNYVFDIWKQYYPQPVEIKHDHVLDHYD----IHEELGTGAFGVVHRVTERATGNNFAA 56

Query: 223 KKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           K +    E   +    EI +M  LRH  LV LH       E++++Y +M  
Sbjct: 57  KFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 107

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 5e-20
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           F + +G G FG V  G        +A+K I   S     EF+ E   M  L H  LVQL+
Sbjct: 8   FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLY 65

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C +++ + ++  YM N
Sbjct: 66  GVCTKQRPIFIITEYMAN 83

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score = 83.3 bits (205), Expect = 9e-20
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
            +  +  +G    ++I Y    K L  +L     S     ++   +D+  +L + +  GF
Sbjct: 153 TVPWNWTNGEVANVFISYEASTKSLTASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGF 210

Query: 75  SASTGI---LTSNQYILGWSFS 93
           SA+TGI         +L WSF 
Sbjct: 211 SATTGIDKGYVQTNDVLSWSFE 232

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 1e-19
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 9/102 (8%)

Query: 172 YEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ 231
           YE    +  P+     D ++        +G G FGKVYK     + +  A K I   SE+
Sbjct: 1   YEHVTRDLNPE-----DFWE----IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE 51

Query: 232 WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
            +++++ EI  + +  H N+V+L      +  L ++  +   
Sbjct: 52  ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 93

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 2e-19
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWM-KEFVSEIVSMGALRHRNLVQL 254
               +G G  G V+K     SGL +A K I  + +  +  + + E+  +       +V  
Sbjct: 10  KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF 69

Query: 255 HGYCRRKQELLLVYNYMHN 273
           +G      E+ +   +M  
Sbjct: 70  YGAFYSDGEISICMEHMDG 88

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 2e-19
 Identities = 18/76 (23%), Positives = 37/76 (48%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGY 257
           E IG+G  G VY  +   +G  +A+++++   +   +  ++EI+ M   ++ N+V     
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 258 CRRKQELLLVYNYMHN 273
                EL +V  Y+  
Sbjct: 86  YLVGDELWVVMEYLAG 101

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 3e-19
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 15/101 (14%)

Query: 173 EDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW 232
           ++WE          +   K      E +G G FG+V+ G  +     +AVK +   S   
Sbjct: 6   DEWE-------VPRET-LK----LVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMS- 51

Query: 233 MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
              F++E   M  L+H+ LV+L+     ++ + ++  YM N
Sbjct: 52  PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMEN 91

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 5e-19
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVL---STSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNL 251
           F E+IG+G FG VY G L       +  AVK ++  ++   + +F++E + M    H N+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90

Query: 252 VQLHGYC-RRKQELLLVYNYMHN 273
           + L G C R +   L+V  YM +
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKH 113

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.0 bits (202), Expect = 1e-18
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 193 TKGFKEL--IGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALR 247
            K F +L  IG G FG VY      +   +A+KK+S+    S +  ++ + E+  +  LR
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 248 HRNLVQLHGYCRRKQELLLVYNYMHN 273
           H N +Q  G   R+    LV  Y   
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLG 99

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.2 bits (200), Expect = 2e-18
 Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 187 KDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE-FVSEIVSMGA 245
           +D+Y     F++++G G F +V       +   +A+K I+  + +  +    +EI  +  
Sbjct: 8   RDIYD----FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 246 LRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           ++H N+V L         L L+   +  
Sbjct: 64  IKHPNIVALDDIYESGGHLYLIMQLVSG 91

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 5e-18
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 14/107 (13%)

Query: 181 PQRFSYKDLYKATK--------GFKELIGKGGFGKVYKGVL-----STSGLPIAVKKISH 227
           P+ FS  D+Y   +             +G+G FG VY+GV            +A+K ++ 
Sbjct: 1   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 60

Query: 228 D-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
             S +   EF++E   M      ++V+L G   + Q  L++   M  
Sbjct: 61  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 107

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 5e-18
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS-HDSEQWMKEFVSEIVSMGALRHRNLVQL 254
             + +G+G +G+V   V   +   +AVK +    +    +    EI     L H N+V+ 
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68

Query: 255 HGYCRRKQELLLVYNYMHNK 274
           +G+ R      L   Y    
Sbjct: 69  YGHRREGNIQYLFLEYCSGG 88

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 5e-18
 Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             + IGKG FG V  G     G  +AVK I +D+    + F++E   M  LRH NLVQL 
Sbjct: 11  LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLL 66

Query: 256 GYC-RRKQELLLVYNYMHN 273
           G     K  L +V  YM  
Sbjct: 67  GVIVEEKGGLYIVTEYMAK 85

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 1e-17
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 187 KDLYKATKGFKEL---IGKGGFGKVYKGVL--STSGLPIAVKKISHDSEQW-MKEFVSEI 240
           K L+            +G G FG V +GV       + +A+K +   +E+   +E + E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 241 VSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
             M  L +  +V+L G C + + L+LV      
Sbjct: 61  QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 92

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 2e-17
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 17/111 (15%)

Query: 170 ELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVL-----STSGLPIAVKK 224
           +L  D + E+   R S          F + +G G FGKV +        S + + +AVK 
Sbjct: 11  QLPYDHKWEFPRNRLS----------FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKM 60

Query: 225 ISHDSEQWMKE-FVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +   +    +E  +SE+  +  L  H N+V L G C      L++  Y   
Sbjct: 61  LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 111

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 2e-17
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 14/101 (13%)

Query: 173 EDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW 232
           +DWE   G                 + IG G FG VYKG      + + +  ++  + Q 
Sbjct: 1   DDWEIPDG----QIT--------VGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQ 47

Query: 233 MKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           ++ F +E+  +   RH N++   GY    Q L +V  +   
Sbjct: 48  LQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEG 87

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score = 76.7 bits (188), Expect = 3e-17
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 15  NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGF 74
            +  D  +G      I Y    K L  +L     S      ++  +DL +IL + + VGF
Sbjct: 158 TVQWDWINGGVAFATITYLAPNKTLIASLV--YPSNQTTFSVAASVDLKEILPEWVRVGF 215

Query: 75  SASTGILT--SNQYILGWSFS 93
           SA+TG  T      +L WSF+
Sbjct: 216 SAATGYPTEVETHDVLSWSFT 236

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 3e-17
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQ 253
           F   IG+G F  VYKG+ + + + +A  ++     ++   + F  E   +  L+H N+V+
Sbjct: 13  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72

Query: 254 LHGYC----RRKQELLLVYNYMHN 273
            +       + K+ ++LV   M +
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTS 96

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 3e-17
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHR 249
             E +G G FG V +G         + +AVK +  D     + M +F+ E+ +M +L HR
Sbjct: 12  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           NL++L+G       + +V      
Sbjct: 72  NLIRLYGVV-LTPPMKMVTELAPL 94

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 4e-17
 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRN 250
            +++IG G FG+VYKG+L TS     +P+A+K +    +E+   +F+ E   MG   H N
Sbjct: 11  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 70

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           +++L G   + + ++++  YM N
Sbjct: 71  IIRLEGVISKYKPMMIITEYMEN 93

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 4e-17
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLV 252
           F +++G+G F  V       +    A+K +       E  +     E   M  L H   V
Sbjct: 12  FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
           +L+   +  ++L    +Y  N
Sbjct: 72  KLYFTFQDDEKLYFGLSYAKN 92

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 4e-17
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGL--PIAVKKIS-HDSEQWMKEFVSEIVSMGAL-RHRNL 251
           F+++IG+G FG+V K  +   GL    A+K++  + S+   ++F  E+  +  L  H N+
Sbjct: 14  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 73

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           + L G C  +  L L   Y  +
Sbjct: 74  INLLGACEHRGYLYLAIEYAPH 95

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 1e-16
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 182 QRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKI------SHDSEQWMKE 235
           ++ +  D Y       E +G G F  V K    ++GL  A K I      S       ++
Sbjct: 4   RQENVDDYYD----TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59

Query: 236 FVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK 274
              E+  +  ++H N++ LH     K +++L+   +   
Sbjct: 60  IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 98

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 1e-16
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 196 FKELIGKGGFGKVYKGVLST---SGLPIAVKKISHDSEQWMKE-FVSEIVSMGALRHRNL 251
               IG+G FG V++G+  +     L +A+K   + +   ++E F+ E ++M    H ++
Sbjct: 11  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
           V+L G    +  + ++      
Sbjct: 71  VKLIGVI-TENPVWIIMELCTL 91

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 2e-16
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
            +E IGKG FG+V++G     G  +AVK  S   E+      +EI     LRH N++   
Sbjct: 7   LQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFI 63

Query: 256 GYCRRKQ----ELLLVYNYMHN 273
               +      +L LV +Y  +
Sbjct: 64  AADNKDNGTWTQLWLVSDYHEH 85

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 2e-16
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 15/102 (14%)

Query: 172 YEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ 231
            + WE          + L       +  +G+G FG+V+ G        +A+K +      
Sbjct: 9   KDAWE-------IPRESLR-----LEVKLGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTM 54

Query: 232 WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
             + F+ E   M  LRH  LVQL+     +  + +V  YM  
Sbjct: 55  SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSK 95

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 2e-16
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKE-----FVSEIVSMGALRHRNLV 252
           + +G+G F  VYK     +   +A+KKI        K+      + EI  +  L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
            L      K  + LV+++M  
Sbjct: 64  GLLDAFGHKSNISLVFDFMET 84

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (184), Expect = 3e-16
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGAL-RH 248
           F +++G G FGKV          +   + +AVK +   ++    +  +SE+  M  L  H
Sbjct: 41  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 100

Query: 249 RNLVQLHGYCRRKQELLLVYNYMHN 273
            N+V L G C     + L++ Y   
Sbjct: 101 ENIVNLLGACTLSGPIYLIFEYCCY 125

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 3e-16
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS---HDSEQWMKEFVSEIVSMGALRHRNLV 252
               +GKG FG VY      S   +A+K +     +      +   E+     LRH N++
Sbjct: 10  IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 69

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
           +L+GY      + L+  Y   
Sbjct: 70  RLYGYFHDATRVYLILEYAPL 90

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 4e-16
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-WMKEFVSEIVSMGALRHRNLVQLHG 256
             IG+G +G V     + + + +A+KKIS    Q + +  + EI  +   RH N++ ++ 
Sbjct: 14  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73

Query: 257 YCRRKQELLLVYNYM 271
             R      +   Y+
Sbjct: 74  IIRAPTIEQMKDVYL 88

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 5e-16
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 200 IGKGGFGKVYKGVL--STSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLH 255
           +G G FG V KG          +AVK + +++       E ++E   M  L +  +V++ 
Sbjct: 15  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74

Query: 256 GYCRRKQELLLVYNYMHN 273
           G C   +  +LV      
Sbjct: 75  GICEA-ESWMLVMEMAEL 91

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 5e-16
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQ 253
               IG G +G+  K    + G  +  K++ + S  E   +  VSE+  +  L+H N+V+
Sbjct: 8   VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 67

Query: 254 LHGYC--RRKQELLLVYNYMHN 273
            +     R    L +V  Y   
Sbjct: 68  YYDRIIDRTNTTLYIVMEYCEG 89

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.9 bits (178), Expect = 1e-15
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLV 252
             E++G GG  +V+          +AVK +  D      +   F  E  +  AL H  +V
Sbjct: 11  LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70

Query: 253 QLHGYCR----RKQELLLVYNYMHN 273
            ++              +V  Y+  
Sbjct: 71  AVYDTGEAETPAGPLPYIVMEYVDG 95

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.6 bits (177), Expect = 1e-15
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G VYK   +  G   A+KKI    + E      + EI  +  L+H N+V+L+
Sbjct: 8   EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 256 GYCRRKQELLLVYNYMHN 273
                K+ L+LV+ ++  
Sbjct: 67  DVIHTKKRLVLVFEHLDQ 84

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.8 bits (178), Expect = 2e-15
 Identities = 13/81 (16%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLV 252
               +G G FG+V+      +G   A+K +  +     + ++    E + +  + H  ++
Sbjct: 8   ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
           ++ G  +  Q++ ++ +Y+  
Sbjct: 68  RMWGTFQDAQQIFMIMDYIEG 88

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 2e-15
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G VYK     +G  +A+KKI  D  +E      + EI  +  L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67

Query: 256 GYCRRKQELLLVYNYMHN 273
                + +L LV+ ++H 
Sbjct: 68  DVIHTENKLYLVFEFLHQ 85

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 2e-15
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 18/99 (18%)

Query: 181 PQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEI 240
           PQ  SY D         ++IG G FG VY+  L  SG  +A+KK+  D     +    E+
Sbjct: 17  PQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----EL 64

Query: 241 VSMGALRHRNLVQLHGYCRRKQE------LLLVYNYMHN 273
             M  L H N+V+L  +     E      L LV +Y+  
Sbjct: 65  QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 3e-15
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             E +G+G FG V++ V ++S      K +             EI  +   RHRN++ LH
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLH 67

Query: 256 GYCRRKQELLLVYNYMHN 273
                 +EL++++ ++  
Sbjct: 68  ESFESMEELVMIFEFISG 85

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.8 bits (175), Expect = 4e-15
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHR 249
           +   IG+G FG+V++              +AVK +  + S     +F  E   M    + 
Sbjct: 17  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
           N+V+L G C   + + L++ YM  
Sbjct: 77  NIVKLLGVCAVGKPMCLLFEYMAY 100

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 4e-15
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 196 FKELIGKGGFGKVYKGVLSTSG----LPIAVKKISH-DSEQWMKEFVSEIVSMGALRHRN 250
             +++G G FG VYKG+    G    +P+A+K++    S +  KE + E   M ++ + +
Sbjct: 13  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 72

Query: 251 LVQLHGYCRRKQELLLVYNYMHN 273
           + +L G C      L+       
Sbjct: 73  VCRLLGICLTSTVQLITQLMPFG 95

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 7e-15
 Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 184 FSYKDLYKATKGFK------ELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKE 235
           F  +++ K     +      + +G G +G V   V   +G  +A+KK+     SE + K 
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 236 FVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM 271
              E+  +  +RH N++ L       + L    ++ 
Sbjct: 64  AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 99

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 71.3 bits (174), Expect = 8e-15
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS------HDSEQWMKEFVSEIVSMGALRHR 249
              +IG+GGFG+VY    + +G   A+K +          E         +  +      
Sbjct: 8   VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 67

Query: 250 NLVQLHGYCRRKQELLLVYNYMHN 273
            +V +        +L  + + M+ 
Sbjct: 68  FIVCMSYAFHTPDKLSFILDLMNG 91

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 2e-14
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 19/113 (16%)

Query: 170 ELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVL-------STSGLPIAV 222
           EL ED   E    R              + +G+G FG+V                  +AV
Sbjct: 1   ELPEDPRWELPRDRLV----------LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV 50

Query: 223 KKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMHN 273
           K +  D +E+ + + +SE+  M  + +H+N++ L G C +   L ++  Y   
Sbjct: 51  KMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 103

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (165), Expect = 6e-14
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKI--SHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
           E IG+G +G V+K     +   +A+K++    D E      + EI  +  L+H+N+V+LH
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 256 GYCRRKQELLLVYNYMHN 273
                 ++L LV+ +   
Sbjct: 68  DVLHSDKKLTLVFEFCDQ 85

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 6e-14
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMG-ALRHRNL 251
             +++GKG FGKV+      +    A+K +  D    +  ++  + E   +  A  H  L
Sbjct: 6   LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 65

Query: 252 VQLHGYCRRKQELLLVYNYMHN 273
             +    + K+ L  V  Y++ 
Sbjct: 66  THMFCTFQTKENLFFVMEYLNG 87

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 3e-13
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS------EQWMKEFVSEIVSMGALR-- 247
              L+G GGFG VY G+  +  LP+A+K +  D                E+V +  +   
Sbjct: 8   VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67

Query: 248 HRNLVQLHGYCRRKQELLLVYNYMHN 273
              +++L  +  R    +L+      
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEP 93

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 4e-13
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLH 255
             IG+G FG+V+K     +G  +A+KK+  ++  E +    + EI  +  L+H N+V L 
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 256 GYC--------RRKQELLLVYNYMHN 273
             C        R K  + LV+++  +
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEH 101

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 6e-13
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVKKIS--HDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
             +G G +G V     + +GL +AVKK+S    S    K    E+  +  ++H N++ L 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 256 GYCRRKQELLLVYNYM 271
                 + L    +  
Sbjct: 84  DVFTPARSLEEFNDVY 99

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 64.3 bits (156), Expect = 1e-12
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 10/88 (11%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKIS---------HDSEQWMKEFVSEIVSMGAL 246
            KE++G+G    V + +   +    AVK I           + ++  +  + E+  +  +
Sbjct: 7   PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66

Query: 247 R-HRNLVQLHGYCRRKQELLLVYNYMHN 273
             H N++QL           LV++ M  
Sbjct: 67  SGHPNIIQLKDTYETNTFFFLVFDLMKK 94

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (156), Expect = 1e-12
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 12/109 (11%)

Query: 173 EDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SE 230
           + +  E G   F+    Y+      + IG G  G V     +     +A+KK+S    ++
Sbjct: 2   QFYSVEVGDSTFTVLKRYQ----NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 57

Query: 231 QWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYNYMHN 273
              K    E+V M  + H+N++ L      +      Q++ LV   M  
Sbjct: 58  THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 106

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.1 bits (155), Expect = 1e-12
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
               IG G FG +Y G    +G  +A+K     ++    +   E      ++    +   
Sbjct: 11  LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTI 68

Query: 256 GYCRRKQELLLVYNYM 271
            +C  + +  ++   +
Sbjct: 69  RWCGAEGDYNVMVMEL 84

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 63.7 bits (154), Expect = 3e-12
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 173 EDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQW 232
           E W+ E     +  +D Y+        +G+G + +V++ +  T+   + VK +    +  
Sbjct: 20  EYWDYESHVVEWGNQDDYQ----LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-- 73

Query: 233 MKEFVSEIVSMGALR-HRNLVQLHGYCRRKQE--LLLVYNYMHN 273
            K+   EI  +  LR   N++ L    +        LV+ +++N
Sbjct: 74  -KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 116

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 3e-12
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLV 252
           + +L+GKG FGKV       +G   A+K +  +   ++  +   V+E   +   RH  L 
Sbjct: 9   YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 253 QLHGYCRRKQELLLVYNYMHN 273
            L    +    L  V  Y + 
Sbjct: 69  ALKYAFQTHDRLCFVMEYANG 89

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.3 bits (153), Expect = 3e-12
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 9/112 (8%)

Query: 165 KKKYEELYEDWESEYGPQRFSYKDLYKATKGFKELIGKGGFGKVYKGVLSTSGLPIAVKK 224
            K  E+  + WE+    Q  +  D +       + +G G FG+V       SG   A+K 
Sbjct: 20  AKAKEDFLKKWETP--SQNTAQLDQFD----RIKTLGTGSFGRVMLVKHKESGNHYAMKI 73

Query: 225 ISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN 273
           +        + ++  ++E   + A+    LV+L    +    L +V  Y+  
Sbjct: 74  LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 60.6 bits (146), Expect = 2e-11
 Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRN-LVQL 254
               IG+G FG +++G    +   +A+K     S+    +   E  +   L     +  +
Sbjct: 9   VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNV 66

Query: 255 HGYCRRKQELLLVYNYMHN 273
           + + +     +LV + +  
Sbjct: 67  YYFGQEGLHNVLVIDLLGP 85

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 4e-11
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 8/81 (9%)

Query: 197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHG 256
            +++G G  GKV +     +    A+K +  D  +  +E     +   A +  ++V++  
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKML-QDCPKARREVE---LHWRASQCPHIVRIVD 72

Query: 257 YCR----RKQELLLVYNYMHN 273
                   ++ LL+V   +  
Sbjct: 73  VYENLYAGRKCLLIVMECLDG 93

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 7e-11
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 198 ELIGKGGFGKVYKGV-LSTSGLPIAVKKISHDS-----EQWMKEFVSEIVSMGALRHRNL 251
             IG+G +GKV+K   L   G  +A+K++   +            V+ +  +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 252 VQLHGYCRRKQELLLVYNYM 271
           V+L   C   +        +
Sbjct: 73  VRLFDVCTVSRTDRETKLTL 92

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 8e-11
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 196 FKELIGKGGFGKVYKGVL-----STSGLPIAVKKISHDS-EQWMKEFVSEIVSMGA-LRH 248
             + +G+G FG+V +        + +   +AVK +   +     +  +SE+  +     H
Sbjct: 17  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 76

Query: 249 RNLVQLHGYCRRKQE-LLLVYNYMHN 273
            N+V L G C +    L+++  +   
Sbjct: 77  LNVVNLLGACTKPGGPLMVIVEFCKF 102

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 196 FKELIGKGGFGKVYKGVLST---SGLPIAVKKISH----DSEQWMKEFVSEIVSMGALRH 248
             +++G G +GKV+     +   +G   A+K +         +  +   +E   +  +R 
Sbjct: 28  LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87

Query: 249 R-NLVQLHGYCRRKQELLLVYNYMHN 273
              LV LH   + + +L L+ +Y++ 
Sbjct: 88  SPFLVTLHYAFQTETKLHLILDYING 113

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.9 bits (128), Expect = 5e-09
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLH 255
               +G G F  V+      +   +A+K +  D + + +    EI  +  +   +  +  
Sbjct: 17  LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKED 75

Query: 256 GYCRRKQELLLVYNYMHNK 274
                    LL +      
Sbjct: 76  SMGANHILKLLDHFNHKGP 94

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 3/92 (3%)

Query: 1   NDSAPAAYFSDEGSNISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPL 60
            D           S          P++  I Y  +   + +                   
Sbjct: 135 YDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAK--- 191

Query: 61  DLSQILLDTMHVGFSASTGILTSNQYILGWSF 92
             + ++    H G SA+TG L  +  +L +  
Sbjct: 192 VENMVIPTQGHFGISAATGGLADDHDVLSFLT 223

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 46.7 bits (110), Expect = 5e-07
 Identities = 12/71 (16%), Positives = 20/71 (28%), Gaps = 11/71 (15%)

Query: 198 ELIGKGGFGKVYKGVLSTSGLPIAVK----------KISHDSEQWMKEFVSEIVSMGALR 247
           +L+G+G    V+            VK          K+    +     F    +      
Sbjct: 6   KLMGEGKESAVFNCYSEK-FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 248 HRNLVQLHGYC 258
            R L +L G  
Sbjct: 65  FRALQKLQGLA 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	274
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	99.78
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	99.78
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.77
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	99.76
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	99.76
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	99.75
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	99.75
d1leda_	243	Legume lectin {West-central african legume (Griffo	99.75
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.74
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	99.73
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	99.72
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	99.72
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	99.72
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.71
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	99.69
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.69
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	99.69
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	99.68
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.68
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	99.64
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.64
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.62
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	99.62
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.61
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.59
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.58
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.58
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.58
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.58
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.57
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.57
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.57
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.57
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.57
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.56
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.56
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.56
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.56
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.56
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.54
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.54
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.53
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.53
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.52
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.52
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.5
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.5
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.5
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.5
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.5
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.49
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.49
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.47
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.47
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.47
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.47
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.46
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.44
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.44
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.43
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.42
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.42
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.4
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.39
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.39
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.37
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.35
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.33
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.3
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.29
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.29
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.28
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.28
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.24
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.19
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.17
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.17
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.16
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.13
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.02
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.98
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.58
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.48
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	98.42
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	97.09
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	96.33
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	86.05

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=99.78  E-value=6.3e-20  Score=153.19  Aligned_cols=79  Identities=25%  Similarity=0.450  Sum_probs=71.9

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcc--cceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILT--SNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~--~~~~i~~WsF   92 (274)
                      ...+++.+|+.++|||+||+.+++|+|+|.+.+  +|..|+|++.+||+++|+++||||||||||...  +.|+|++|+|
T Consensus       155 ~~~~~~~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~p~ls~~vDLs~~l~~~vyvGFSasTG~~~~~q~h~I~sWsF  232 (237)
T d1qnwa_         155 TVKWDWRNGEVADVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF  232 (237)
T ss_dssp             EEECCCCTTCCEEEEEEEEGGGTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEE
T ss_pred             ccccccCCCcEEEEEEEEcCCCcEEEEEEecCC--CCccceEEEEEChHHhCCCcEEEEEEeECCCCCCccEeEEEEeEe
Confidence            456778899999999999999999999998754  788899999999999999999999999999864  7899999999


Q ss_pred             ccc
Q 045713           93 SRI   95 (274)
Q Consensus        93 ~s~   95 (274)
                      +++
T Consensus       233 ~s~  235 (237)
T d1qnwa_         233 TSN  235 (237)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            975

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=99.78  E-value=1.2e-19  Score=151.62  Aligned_cols=80  Identities=25%  Similarity=0.400  Sum_probs=73.1

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC---cccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI---LTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~---~~~~~~i~~Ws   91 (274)
                      +.+++|.+|+.++|||+||+.+++|+|+|.+.+  +|..|+|++.+||+++|+++|||||||+||.   ..+.|+|++|+
T Consensus       155 t~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~V~sWs  232 (239)
T d1gzca_         155 TQPFQLDNGQVANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWS  232 (239)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cCCccccCCCEEEEEEEEeCCCcEEEEEEecCC--CCcceeeeeEechHHhcCCcEEEEEEEEcCCCCCCceeeEEEEEE
Confidence            567889999999999999999999999998754  7889999999999999999999999999995   56899999999


Q ss_pred             ccccC
Q 045713           92 FSRIG   96 (274)
Q Consensus        92 F~s~~   96 (274)
                      |+++.
T Consensus       233 F~s~l  237 (239)
T d1gzca_         233 FQASL  237 (239)
T ss_dssp             EEEEE
T ss_pred             eEeeC
Confidence            99863

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.77  E-value=2.2e-19  Score=148.62  Aligned_cols=79  Identities=29%  Similarity=0.434  Sum_probs=73.6

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      ..+++|.+|+.++|||+||+.+++|+|++.+.   ++..|+|++.+||+++|+++||||||||||...+.|+|++|+|++
T Consensus        37 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~~~~~---~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS  113 (237)
T d1nlsa_          37 TAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYP---NADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS  113 (237)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEECT---TSCCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEE
T ss_pred             eecccccCCCEEEEEEEEecCCcEEEEEEecC---CCCCeEEEEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEe
Confidence            56889999999999999999999999999864   577899999999999999999999999999999999999999987


Q ss_pred             cC
Q 045713           95 IG   96 (274)
Q Consensus        95 ~~   96 (274)
                      ..
T Consensus       114 ~~  115 (237)
T d1nlsa_         114 KL  115 (237)
T ss_dssp             EE
T ss_pred             ec
Confidence            53

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=99.76  E-value=2.1e-19  Score=149.60  Aligned_cols=75  Identities=36%  Similarity=0.508  Sum_probs=68.2

Q ss_pred             eeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc-ccceeEeccccccc
Q 045713           18 LDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL-TSNQYILGWSFSRI   95 (274)
Q Consensus        18 ~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~-~~~~~i~~WsF~s~   95 (274)
                      .+|.+|+.++|||+||+.+++|+|+|++.   ++..|+|++.+||+++|+|+||||||||||.. .+.|+|++|+|+++
T Consensus       160 ~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~I~sWsF~s~  235 (236)
T d1hqla_         160 SDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSN  235 (236)
T ss_dssp             HHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEEE
T ss_pred             ccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEEEEEeEeEec
Confidence            36889999999999999999999999875   46788999999999999999999999999975 57799999999874

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.76  E-value=4.1e-19  Score=149.38  Aligned_cols=82  Identities=28%  Similarity=0.429  Sum_probs=72.8

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcc--cceeEecccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILT--SNQYILGWSF   92 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~--~~~~i~~WsF   92 (274)
                      ...++|.+|+.++|||+||+.+++|+|++.+..  +|..|+++..+||+.+|+++||||||||||...  |.|+|++|+|
T Consensus       151 ~~~~~l~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~h~I~sWsF  228 (251)
T d1g9fa_         151 TTSWDLANNKVAKVLITYDASTSLLVASLVYPS--QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSF  228 (251)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEEGG--GTEEEEEEEECCC-CCSCSEEEEEEEEEECSSSCCCEEEEEEEEE
T ss_pred             ccceEecCCCEEEEEEEEECCccEEEEEEecCC--CCcceeEEEEecchhhCCCcEEEEEEeecCCCCCCceeEEEEeEe
Confidence            467889999999999999999999999998754  788899999999999999999999999999855  7899999999


Q ss_pred             cccCCc
Q 045713           93 SRIGEA   98 (274)
Q Consensus        93 ~s~~~~   98 (274)
                      +++.++
T Consensus       229 ~s~~~~  234 (251)
T d1g9fa_         229 ASNLPH  234 (251)
T ss_dssp             EEEECC
T ss_pred             ECCCCC
Confidence            986543

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=99.75  E-value=4.9e-19  Score=147.61  Aligned_cols=79  Identities=33%  Similarity=0.508  Sum_probs=71.9

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC-------cccceeE
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI-------LTSNQYI   87 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~-------~~~~~~i   87 (274)
                      ...++|.+|+.++|||+||+.+++|+|+|.+.+  +|..|+++..+||+.+|+++||||||||||.       ..|.|+|
T Consensus       149 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSasTG~~~~~~~~~~e~h~I  226 (237)
T d2d3sa1         149 TVPFTLDNGGIANVVIKYDASTKILHVVLVFPS--LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDI  226 (237)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEE
T ss_pred             ccceeecCCCEEEEEEEEECCCCEEEEEEEcCC--CCcccceeeEechHHhCCCcEEEEEEeECCCCccCccccceeeEE
Confidence            456789999999999999999999999999865  5778899999999999999999999999995       5689999


Q ss_pred             eccccccc
Q 045713           88 LGWSFSRI   95 (274)
Q Consensus        88 ~~WsF~s~   95 (274)
                      ++|+|+++
T Consensus       227 ~sWsFss~  234 (237)
T d2d3sa1         227 LSWSFSAS  234 (237)
T ss_dssp             EEEEEEEE
T ss_pred             EEeEeEee
Confidence            99999875

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=99.75  E-value=6.3e-19  Score=146.76  Aligned_cols=79  Identities=32%  Similarity=0.473  Sum_probs=70.6

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccc--cceeEeEEeeecC---cccceeEec
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILL--DTMHVGFSASTGI---LTSNQYILG   89 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~--~~~~vGfsastg~---~~~~~~i~~   89 (274)
                      ...++|.+|+.++|||+||+.+++|+|+|.+.+  +|..|+|++.|||+.+|+  |+|||||||+||.   ..|.|+|++
T Consensus       150 ~~~~~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~idL~~~l~~~~~v~vGFSasTG~~~~~~~~h~I~s  227 (234)
T d1f9ka_         150 TLHFQLENGGVANVVIKYDSPTKILNVVLAFHS--VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIIS  227 (234)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEE
T ss_pred             cccccccCCCEEEEEEEEcCCCcEEEEEEEeCC--CCccceEEEEEcHHHhcCCCCEEEEEEEeecCCCCCceeeeEEEE
Confidence            567889999999999999999999999999865  566789999999999997  5799999999994   467899999


Q ss_pred             cccccc
Q 045713           90 WSFSRI   95 (274)
Q Consensus        90 WsF~s~   95 (274)
                      |+|+++
T Consensus       228 WsF~s~  233 (234)
T d1f9ka_         228 WSFTSS  233 (234)
T ss_dssp             EEEEEE
T ss_pred             EEeEEe
Confidence            999874

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=99.75  E-value=5.9e-19  Score=147.42  Aligned_cols=74  Identities=30%  Similarity=0.471  Sum_probs=68.1

Q ss_pred             eecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccccC
Q 045713           19 DLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSRIG   96 (274)
Q Consensus        19 ~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s~~   96 (274)
                      ++.+|+.++|||+||+.+++|+|+|++.   ++..|+|++.|||+++|+++||||||||||. .+.|+|++|+|+++.
T Consensus       165 ~~~~g~~~~v~I~Yd~~~~~L~V~l~~~---~~~~p~ls~~idL~~~l~~~vyvGFSAsTG~-~~~h~I~sWsF~s~l  238 (243)
T d1leda_         165 DAYGSSIATAHITYDARSKILTVLLSYE---HGRDYILSHVVDLAKVLPQKVRIGFSAGVGY-DEVTYILSWHFFSTL  238 (243)
T ss_dssp             HHTSCCEEEEEEEEETTTTEEEEEEEET---TSCEEEEEEECCHHHHSCSEEEEEEEEEECB-SEEEEEEEEEEEEEC
T ss_pred             CcccCceeEEEEEEECCCCEEEEEEeeC---CCCCceEEEecCHHHhcCCcEEEEEEcccCC-cceeeEEEEEEEeeC
Confidence            6778999999999999999999999875   5678899999999999999999999999995 699999999999753

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=99.74  E-value=1.3e-18  Score=144.53  Aligned_cols=78  Identities=24%  Similarity=0.348  Sum_probs=70.6

Q ss_pred             eeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeec---CcccceeEecccc
Q 045713           16 ISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTG---ILTSNQYILGWSF   92 (274)
Q Consensus        16 ~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg---~~~~~~~i~~WsF   92 (274)
                      .++++.+|+.++|||+||+.+++|+|+|.+..  +|..|+|+..+||+.+|+++|||||||+||   ...|.|+|++|+|
T Consensus       146 ~~~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~h~I~sWsF  223 (228)
T d1ioaa_         146 CDFHKYNGEKTDVQITYDSSNNDLRVFLHFTV--SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSF  223 (228)
T ss_dssp             CCHHHHCSSCEEEEEEEETTTTEEEEEEEETT--TCCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEE
T ss_pred             cccccccCcEEEEEEEEcCCCCEEEEEEEeCC--CCceeeEEEEEchHHcCCCcEEEEEEeecCCCCCCceEEEEEEEEe
Confidence            45577899999999999999999999999754  778899999999999999999999999999   4567899999999


Q ss_pred             ccc
Q 045713           93 SRI   95 (274)
Q Consensus        93 ~s~   95 (274)
                      +++
T Consensus       224 ss~  226 (228)
T d1ioaa_         224 SSK  226 (228)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            874

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=99.73  E-value=1.9e-18  Score=144.34  Aligned_cols=76  Identities=26%  Similarity=0.347  Sum_probs=68.7

Q ss_pred             eeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC-cccceeEeccccccc
Q 045713           18 LDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI-LTSNQYILGWSFSRI   95 (274)
Q Consensus        18 ~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~-~~~~~~i~~WsF~s~   95 (274)
                      .++.+|+.++|||+||+.+++|+|+|.+.+  +|..|+|+..|||+.+|+|+||||||||||. ..+.|+|++|+|+++
T Consensus       160 ~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdLs~~l~~~v~vGFSasTG~~~~~~H~I~sWsFsst  236 (240)
T d1fx5a_         160 KRYGLNNVANVEIIYEASSKTLTASLTYPS--DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTST  236 (240)
T ss_dssp             CCCSGGGCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEEETTSCEEEEEEEEEEEEE
T ss_pred             cccCCCCeEEEEEEEcCCCCEEEEEEecCC--CceeeEEeEEEchHHhCCCcEEEEEEeECCCCCCceEEEEEEEeEEe
Confidence            356678899999999999999999998765  6778999999999999999999999999996 568899999999875

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=99.72  E-value=2.2e-18  Score=145.11  Aligned_cols=79  Identities=30%  Similarity=0.493  Sum_probs=71.8

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeec---CcccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTG---ILTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg---~~~~~~~i~~Ws   91 (274)
                      +.++++.+|+.++|||+||+.+++|+|++.+..  +|..|+++..+||+.+|+++|||||||+||   ...+.|+|++|+
T Consensus       151 ~~~~~~~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~H~IlsWs  228 (253)
T d1g7ya_         151 TASWGLANGQNAEILITYNAATSLLVASLVHPS--RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWS  228 (253)
T ss_dssp             EEECCCCTTSEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEE
T ss_pred             ccCCCccCCCEEEEEEEEeCCcEEEEEEEecCC--CCCceEEEEEechhhcCCCcEEEEEEeEcCCCCCcccccEEEEEE
Confidence            456789999999999999999999999998753  788899999999999999999999999999   457899999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       229 F~s~  232 (253)
T d1g7ya_         229 FASK  232 (253)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            9874

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=99.72  E-value=4.8e-18  Score=142.16  Aligned_cols=78  Identities=23%  Similarity=0.423  Sum_probs=71.7

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      ...+++.+|+.++|||+||+.+++|+|++.+.   ++..|.+++.+||+.+|+++|||||||+||...+.|+|++|+|++
T Consensus       159 ~~~~~~~~g~~~~v~I~Yd~~~~~L~v~~~~~---~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsFss  235 (241)
T d1ukga_         159 TVKWDRRDGQSLNVLVTFNPSTRNLDVVATYS---DGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTS  235 (241)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEET---TCCEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEEEE
T ss_pred             ccccccCCCcEEEEEEEEeCCCcEEEEEEccC---CCCceEEEEEEehHHhCCCcEEEEEEEecCCCCceeEEEEeEEEE
Confidence            34567889999999999999999999999875   567789999999999999999999999999999999999999987


Q ss_pred             c
Q 045713           95 I   95 (274)
Q Consensus        95 ~   95 (274)
                      +
T Consensus       236 ~  236 (241)
T d1ukga_         236 T  236 (241)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=99.72  E-value=4.3e-18  Score=141.68  Aligned_cols=79  Identities=30%  Similarity=0.447  Sum_probs=71.8

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeec---CcccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTG---ILTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg---~~~~~~~i~~Ws   91 (274)
                      ..++++.+|+.++|||+||+.+++|.|++.+..  +|..|.++..+||+.+|+++|||||||+||   ...+.|+|++|+
T Consensus       150 ~~~~~l~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~I~sWs  227 (233)
T d1n47a_         150 TTPFDMVYGEKANIVITYQASTKALAASLVFPV--SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWS  227 (233)
T ss_dssp             EEECCCCTTSCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cccceecCCCEEEEEEEEcCCCeEEEEEEEeCC--CCccEEEEEEechHHhcCCcEEEEEEEecCCCCCcccccEEEEEE
Confidence            456789999999999999999999999998754  677889999999999999999999999999   456889999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       228 Fss~  231 (233)
T d1n47a_         228 FAVS  231 (233)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            9874

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=99.71  E-value=6.2e-18  Score=137.95  Aligned_cols=78  Identities=28%  Similarity=0.458  Sum_probs=69.8

Q ss_pred             eeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc---ccceeEecccc
Q 045713           16 ISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL---TSNQYILGWSF   92 (274)
Q Consensus        16 ~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~---~~~~~i~~WsF   92 (274)
                      .++++.+|+.++|||+||+.+++|+|++.+.+  +|..+.|+..+||+.+||++|||||||+||..   .|.|+|++|+|
T Consensus       123 ~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAaTG~~~~~~e~H~IlsWsF  200 (204)
T d1dhkb_         123 WDVHDYDGQNAEVRITYNSSTKVFSVSLSNPS--TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSF  200 (204)
T ss_dssp             CCGGGTTTSCEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEE
T ss_pred             cccEecCCCEEEEEEEEcCCCEEEEEEEecCC--CCCceeEEEEecchhccCCcEEEEEEeecCCCCCCceeeEEEEEEE
Confidence            35678899999999999999999999999765  56678999999999999999999999999964   46799999999


Q ss_pred             ccc
Q 045713           93 SRI   95 (274)
Q Consensus        93 ~s~   95 (274)
                      +++
T Consensus       201 ss~  203 (204)
T d1dhkb_         201 SSK  203 (204)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            863

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=1.8e-17  Score=142.90  Aligned_cols=91  Identities=30%  Similarity=0.635  Sum_probs=76.6

Q ss_pred             cChhhHHHhhcCcc-----------ceeeeccCceEEEEEEcCCC---ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCC
Q 045713          184 FSYKDLYKATKGFK-----------ELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRH  248 (274)
Q Consensus       184 ~~~~el~~at~~f~-----------~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H  248 (274)
                      ++|+|+..++.+|.           ++||+|+||.||+|.....+   ..||||.+... .....++|.+|+.+|.+++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            56777777776663           57999999999999986544   35899998765 55667789999999999999


Q ss_pred             CCccceeeEEEeCCeEEEEEeccCCC
Q 045713          249 RNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       249 ~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      ||||+++|+|...+.++||||||++|
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g  112 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENG  112 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTE
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCC
Confidence            99999999999999999999999986

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=99.69  E-value=1.5e-17  Score=138.26  Aligned_cols=78  Identities=23%  Similarity=0.374  Sum_probs=69.9

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc-ccceeEeccccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL-TSNQYILGWSFS   93 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~-~~~~~i~~WsF~   93 (274)
                      ....++.+|+.++|||+||+.+++|+|++.+.   ++..|.++..+||+.+|+++|||||||+||.. .+.|+|++|+|+
T Consensus       150 ~~~~~~~~g~~~~v~I~Yd~~~~~L~V~~~~~---~~~~~~l~~~vdL~~~l~~~vyvGFSAsTG~~~~~~H~I~sWsFs  226 (232)
T d1v6ia_         150 TVPWNSVSGAVVKVTVIYDSSTKTLSVAVTND---NGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFT  226 (232)
T ss_dssp             EEECCCCTTCEEEEEEEEETTTTEEEEEEECT---TSCEEEEEEECCHHHHSCSEEEEEEEEECCSSBCCEEEEEEEEEE
T ss_pred             ccccccCCCCEEEEEEEEeCCceEEEEEEecC---CCCcceEEEEEchhhccCCcEEEEEEEECCCCCCcccEEEEeEeE
Confidence            34567889999999999999999999999864   56778899999999999999999999999975 588999999999


Q ss_pred             cc
Q 045713           94 RI   95 (274)
Q Consensus        94 s~   95 (274)
                      ++
T Consensus       227 s~  228 (232)
T d1v6ia_         227 ST  228 (232)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=99.68  E-value=1.5e-17  Score=138.80  Aligned_cols=79  Identities=23%  Similarity=0.419  Sum_probs=71.6

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeec---CcccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTG---ILTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg---~~~~~~~i~~Ws   91 (274)
                      ....++.+|+.++|||+||+.+++|.|+|.+.+  ++..|+++..+||+.+|+++|||||||+||   ...+.|+|++|+
T Consensus       153 ~~~~~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~s~~~e~H~I~sWs  230 (237)
T d1fnya_         153 TVPWNWTNGEVANVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWS  230 (237)
T ss_dssp             EEECCCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEE
T ss_pred             cccccccCCcEEEEEEEEeCCccEEEEEEEeCC--CCcceeEEEEechhhcCCCcEEEEEEEECCCCCCcccccEEEEeE
Confidence            346788899999999999999999999999865  577889999999999999999999999999   456789999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       231 F~s~  234 (237)
T d1fnya_         231 FESN  234 (237)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            9985

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=99.68  E-value=2.7e-17  Score=136.64  Aligned_cols=79  Identities=29%  Similarity=0.499  Sum_probs=71.2

Q ss_pred             eeeeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC---cccceeEeccc
Q 045713           15 NISLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI---LTSNQYILGWS   91 (274)
Q Consensus        15 ~~~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~---~~~~~~i~~Ws   91 (274)
                      ....++.+|+.++|||+||+.+++|.|++.+.+  +|..|+++..+||+.+|+++|||||||+||.   ..|.|+|++|+
T Consensus       150 ~~~~~~~~g~~~~~~I~yd~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~h~I~sWs  227 (233)
T d1g8wa_         150 TTRWDFVNGENAEVLITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWS  227 (233)
T ss_dssp             EEECCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEE
T ss_pred             eccccccCCcEEEEEEEEeCCCcEEEEEEEeCC--CCCcEEEEEEechhHcCCCcEEEEEEEEcCCCCCCceeeEEEEEE
Confidence            456789999999999999999999999998765  6778899999999999999999999999995   45679999999


Q ss_pred             cccc
Q 045713           92 FSRI   95 (274)
Q Consensus        92 F~s~   95 (274)
                      |+++
T Consensus       228 Fss~  231 (233)
T d1g8wa_         228 FASK  231 (233)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9874

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=99.64  E-value=8.7e-17  Score=134.22  Aligned_cols=77  Identities=29%  Similarity=0.393  Sum_probs=68.9

Q ss_pred             eeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCc--ccceeEecccccc
Q 045713           17 SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGIL--TSNQYILGWSFSR   94 (274)
Q Consensus        17 ~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~--~~~~~i~~WsF~s   94 (274)
                      ...+.+|+.++|||+||+.+++|.|++.+..  +|..|.|+..+||+++|+++||||||||||..  .+.|+|++|+|++
T Consensus       160 ~~~~~~g~~~~~~i~y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~H~I~sWsFss  237 (239)
T d1dbna_         160 QWDWINGGVAFATITYLAPNKTLIASLVYPS--NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSFTS  237 (239)
T ss_dssp             ECCCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEEEEE
T ss_pred             cceEeCCceeEEEEEEcCCCCEEEEEEEecC--CCccEEEEEecchHHhcCCcEEEEEEEeCCCCCCcceeEEEEEEeEE
Confidence            4556789999999999999999999998754  67788999999999999999999999999965  4789999999987


Q ss_pred             c
Q 045713           95 I   95 (274)
Q Consensus        95 ~   95 (274)
                      +
T Consensus       238 ~  238 (239)
T d1dbna_         238 T  238 (239)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=99.64  E-value=6.1e-17  Score=134.06  Aligned_cols=77  Identities=27%  Similarity=0.434  Sum_probs=69.3

Q ss_pred             eeeecCCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecC---cccceeEeccccc
Q 045713           17 SLDLQSGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGI---LTSNQYILGWSFS   93 (274)
Q Consensus        17 ~~~l~~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~---~~~~~~i~~WsF~   93 (274)
                      ..++.+|+.++|||+||+.+++|+|+|.+.+  +|..|.++..+||+.+|+++||+||||+||.   ..+.|+|++|+|+
T Consensus       145 ~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~~~~~vdL~~~l~~~~y~GFSAaTG~~s~~~~~H~IlsWsF~  222 (226)
T d1avba_         145 NFGHNNGEKAEVRITYDSPKNDLRVSLLYPS--SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFS  222 (226)
T ss_dssp             CSGGGTTCEEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEE
T ss_pred             ccccCCCeEEEEEEEEcCCCcEEEEEEEeCC--CCccEEEEEEecHHHccCCcEEEEEEEEcCCCCCCeeeeEEEEEEeE
Confidence            4468899999999999999999999998865  6788899999999999999999999999995   4567999999998


Q ss_pred             cc
Q 045713           94 RI   95 (274)
Q Consensus        94 s~   95 (274)
                      ++
T Consensus       223 s~  224 (226)
T d1avba_         223 SN  224 (226)
T ss_dssp             EE
T ss_pred             Ee
Confidence            74

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=8.2e-17  Score=137.91  Aligned_cols=77  Identities=35%  Similarity=0.657  Sum_probs=69.8

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||+|.....+..||||.++.+. ...++|.+|+.+|.+++|||||+++|+|...+.++||||||++|
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g   98 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   98 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCc
Confidence            378999999999999998778999999997653 33568999999999999999999999999999999999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.1e-16  Score=130.44  Aligned_cols=77  Identities=34%  Similarity=0.545  Sum_probs=68.8

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      |.+.||+|+||.||+|..+ ++..||||.++.... ..++|++|+.++.+++|||||+++|+|.+.+.+++||||+++|
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           8 FLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             EeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCC
Confidence            3488999999999999986 478999999986533 3568999999999999999999999999999999999999976

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=8.5e-16  Score=131.56  Aligned_cols=77  Identities=26%  Similarity=0.420  Sum_probs=71.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....++..||||.++.......+.|.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g   94 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   94 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCC
Confidence            78999999999999998889999999998766566778999999999999999999999999999999999999986

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.7e-16  Score=129.43  Aligned_cols=76  Identities=32%  Similarity=0.480  Sum_probs=68.0

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||+|.+.+ +..||||+++... ...++|.+|+.++.+++|||||+++|+|...+.++||||||++|
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEEECCSSCCEEEEEETT-TEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             EEEEeeCCCeEEEEEEECC-CCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCC
Confidence            3789999999999999874 6789999997643 33568999999999999999999999999999999999999987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.7e-15  Score=129.77  Aligned_cols=82  Identities=33%  Similarity=0.547  Sum_probs=68.8

Q ss_pred             hcCccceeeeccCceEEEEEEcCCC---ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-CeEEEE
Q 045713          193 TKGFKELIGKGGFGKVYKGVLSTSG---LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-QELLLV  267 (274)
Q Consensus       193 t~~f~~~lG~G~fG~Vy~g~~~~~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-~~~~LV  267 (274)
                      +.+|+++||+|+||+||+|.+...+   ..||||+++.. +....++|.+|+.+|++++|||||+++|+|... +..++|
T Consensus        28 ~~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv  107 (311)
T d1r0pa_          28 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  107 (311)
T ss_dssp             EEEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEE
T ss_pred             eeccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEE
Confidence            3356689999999999999986432   36899999754 566678899999999999999999999999764 689999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      ||||++|
T Consensus       108 ~E~~~~g  114 (311)
T d1r0pa_         108 LPYMKHG  114 (311)
T ss_dssp             EECCTTC
T ss_pred             EEEeecC
Confidence            9999986

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=8.4e-16  Score=133.60  Aligned_cols=81  Identities=21%  Similarity=0.277  Sum_probs=72.2

Q ss_pred             cCcc--ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEec
Q 045713          194 KGFK--ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNY  270 (274)
Q Consensus       194 ~~f~--~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey  270 (274)
                      ++|.  +.||+|+||.||+|....+|..||+|.++.. .......+.+|+.+|.+++|||||+++++|...+.++|||||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy   85 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   85 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            3454  7899999999999999888999999999765 344567899999999999999999999999999999999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |++|
T Consensus        86 ~~gg   89 (322)
T d1s9ja_          86 MDGG   89 (322)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9976

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2e-15  Score=128.08  Aligned_cols=77  Identities=23%  Similarity=0.329  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||+++... ....+.|.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg   88 (271)
T d1nvra_          11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   88 (271)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCC
Confidence            78999999999999998889999999997652 334567999999999999999999999999999999999999876

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=4.9e-15  Score=125.61  Aligned_cols=79  Identities=25%  Similarity=0.408  Sum_probs=68.5

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe----CCeEEEEEe
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR----KQELLLVYN  269 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~----~~~~~LV~E  269 (274)
                      |.+.||+|+||.||+|.....+..||+|.+...  .....+.|.+|+.+|.+++|||||+++++|..    ...++||||
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            346799999999999999888899999999754  45556789999999999999999999999865    345799999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus        93 ~~~~g   97 (270)
T d1t4ha_          93 LMTSG   97 (270)
T ss_dssp             CCCSC
T ss_pred             CCCCC
Confidence            99987

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2e-15  Score=129.54  Aligned_cols=77  Identities=23%  Similarity=0.394  Sum_probs=70.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||.++.......+.+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg  102 (293)
T d1yhwa1          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG  102 (293)
T ss_dssp             EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCC
Confidence            78999999999999988889999999997654444678999999999999999999999999999999999999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=3.4e-15  Score=129.04  Aligned_cols=77  Identities=29%  Similarity=0.434  Sum_probs=69.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....++..||||.++...   ....+.|.+|+.+|.+++|||||+++++|...+.++||||||++|
T Consensus        21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g  100 (309)
T d1u5ra_          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS  100 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCC
Confidence            78999999999999998888999999997542   344567999999999999999999999999999999999999875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.8e-15  Score=126.22  Aligned_cols=77  Identities=23%  Similarity=0.327  Sum_probs=67.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEe--CCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR--KQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~--~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||++....+|..||+|.++..  .....+.|.+|+.+|.+++|||||+++++|.+  .+.++||||||++
T Consensus        10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~   89 (269)
T d2java1          10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG   89 (269)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTT
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCC
Confidence            7899999999999999888999999999765  44556789999999999999999999999965  4568999999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        90 g   90 (269)
T d2java1          90 G   90 (269)
T ss_dssp             E
T ss_pred             C
Confidence            6

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.57  E-value=4.4e-15  Score=130.49  Aligned_cols=77  Identities=30%  Similarity=0.462  Sum_probs=72.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||.+........+.+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg  108 (350)
T d1koaa2          32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG  108 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            78999999999999998889999999998776666788999999999999999999999999999999999999987

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.1e-15  Score=127.82  Aligned_cols=75  Identities=27%  Similarity=0.452  Sum_probs=64.4

Q ss_pred             eeeeccCceEEEEEEcC--CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          199 LIGKGGFGKVYKGVLST--SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       199 ~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .||+|+||.||+|.++.  .+..||||.++.. .....++|.+|+.+|.+++|||||+++|+|. .+.++||||||++|
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~lvmE~~~~g   93 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG   93 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeEEEEEEeCCCC
Confidence            49999999999998753  3457999999765 4556788999999999999999999999996 45689999999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.5e-15  Score=126.94  Aligned_cols=76  Identities=25%  Similarity=0.413  Sum_probs=62.9

Q ss_pred             ceeeeccCceEEEEEEcC--CCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLST--SGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~--~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.++.  .+..||||.++..  +....++|.+|+.+|.+++|||||+++|+|. .+..+||||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            469999999999998753  3467999999754  3344678999999999999999999999996 4567899999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        92 g   92 (277)
T d1xbba_          92 G   92 (277)
T ss_dssp             E
T ss_pred             C
Confidence            6

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=4.3e-15  Score=126.71  Aligned_cols=77  Identities=35%  Similarity=0.716  Sum_probs=67.1

Q ss_pred             ceeeeccCceEEEEEEcCCC----ceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSG----LPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ++||+|+||.||+|.++..+    ..||||.++.. ......+|.+|+.+|.+++|||||+++|+|...+.+++|||||.
T Consensus        13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~   92 (283)
T d1mqba_          13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME   92 (283)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecc
Confidence            78999999999999986543    46999999765 44556789999999999999999999999999999999999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        93 ~~   94 (283)
T d1mqba_          93 NG   94 (283)
T ss_dssp             TE
T ss_pred             cC
Confidence            75

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.2e-15  Score=126.75  Aligned_cols=77  Identities=23%  Similarity=0.369  Sum_probs=69.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC------HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS------EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|....+|..||||.++...      ....+.|.+|+.+|.+++|||||+++++|...+.++||||||
T Consensus        16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~   95 (293)
T d1jksa_          16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELV   95 (293)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            78999999999999998889999999996431      123678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        96 ~gg   98 (293)
T d1jksa_          96 AGG   98 (293)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.8e-15  Score=128.38  Aligned_cols=75  Identities=29%  Similarity=0.489  Sum_probs=65.2

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||+|.+++ +..||||.++... ...++|.+|+.+|.+++|||||+++|+|. .+.++||||||++|
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g   92 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENG   92 (272)
T ss_dssp             EEEEEEETTEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTC
T ss_pred             eEEEecCCCcEEEEEEECC-CCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCC
Confidence            3789999999999999874 6889999997653 33568999999999999999999999885 46679999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.56  E-value=9.8e-15  Score=128.31  Aligned_cols=77  Identities=27%  Similarity=0.380  Sum_probs=71.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||.++.......+.+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg  111 (352)
T d1koba_          35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG  111 (352)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            78999999999999998789999999998776666778999999999999999999999999999999999999986

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=5.5e-15  Score=124.81  Aligned_cols=77  Identities=26%  Similarity=0.409  Sum_probs=69.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....++..||+|.+...   .....+.+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g   91 (263)
T d2j4za1          12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG   91 (263)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence            7899999999999999888999999999643   1233567899999999999999999999999999999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=7e-15  Score=126.94  Aligned_cols=78  Identities=29%  Similarity=0.583  Sum_probs=65.7

Q ss_pred             cceeeeccCceEEEEEEcCCCc--eEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGL--PIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .++||+|+||.||+|.+.+++.  .||||+++.. .....++|.+|+.+|.++ +|||||+++|+|...+.+++||||++
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~   94 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   94 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecC
Confidence            3789999999999999876664  5788988654 444567899999999998 79999999999999999999999999


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        95 ~g   96 (309)
T d1fvra_          95 HG   96 (309)
T ss_dssp             TC
T ss_pred             CC
Confidence            87

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=3.3e-15  Score=129.01  Aligned_cols=78  Identities=21%  Similarity=0.339  Sum_probs=65.2

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCC-HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS-EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||++....++..||||.+.... ......+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        14 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg   92 (307)
T d1a06a_          14 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG   92 (307)
T ss_dssp             EEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            378999999999999998888999999997653 233456889999999999999999999999999999999999976

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=7.2e-15  Score=126.33  Aligned_cols=85  Identities=25%  Similarity=0.437  Sum_probs=72.1

Q ss_pred             HHhhcCcc--ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC
Q 045713          190 YKATKGFK--ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK  261 (274)
Q Consensus       190 ~~at~~f~--~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~  261 (274)
                      +..+++|.  +.||+|+||.||+|...+     ++..||||+++.. ..+..++|.+|+.+|++++|+||++++|+|...
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   88 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG   88 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence            33444554  889999999999999752     3478999999765 445567899999999999999999999999999


Q ss_pred             CeEEEEEeccCCC
Q 045713          262 QELLLVYNYMHNK  274 (274)
Q Consensus       262 ~~~~LV~Ey~~~G  274 (274)
                      +..+++|||+++|
T Consensus        89 ~~~~~v~e~~~~g  101 (301)
T d1lufa_          89 KPMCLLFEYMAYG  101 (301)
T ss_dssp             SSCEEEEECCTTC
T ss_pred             CceEEEEEecCCC
Confidence            9999999999986

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=7.3e-15  Score=125.67  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||.++..   .....+.+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg   93 (288)
T d1uu3a_          14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG   93 (288)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCC
Confidence            7999999999999999888999999999643   1233567999999999999999999999999999999999999976

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.2e-15  Score=123.65  Aligned_cols=75  Identities=41%  Similarity=0.569  Sum_probs=63.4

Q ss_pred             ccceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEe-CCeEEEEEeccCCC
Q 045713          196 FKELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRR-KQELLLVYNYMHNK  274 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~-~~~~~LV~Ey~~~G  274 (274)
                      |.+.||+|+||.||+|.+.  |..||||+++...  ..++|.+|+.++++++|||||+++|+|.+ .+.++|||||+++|
T Consensus        11 ~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_          11 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             EEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             EeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCC
Confidence            3478999999999999986  6899999997543  35679999999999999999999999965 45689999999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.6e-14  Score=125.06  Aligned_cols=77  Identities=17%  Similarity=0.343  Sum_probs=69.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||+++..   .....+.+.+|+.+|.+++|||||++++++...+.+++|||||++|
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg   89 (316)
T d1fota_          10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG   89 (316)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCc
Confidence            7899999999999999888999999999753   1233567999999999999999999999999999999999999986

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.1e-14  Score=123.49  Aligned_cols=76  Identities=25%  Similarity=0.383  Sum_probs=69.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....++..||||.++.... ....+.+|+.+|.+++|||||++++++...+.++||||||++|
T Consensus        11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg   86 (321)
T d1tkia_          11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCC
Confidence            789999999999999988899999999976543 3456889999999999999999999999999999999999976

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=9.4e-15  Score=124.77  Aligned_cols=75  Identities=28%  Similarity=0.476  Sum_probs=65.3

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||+|..++ +..||||.++... ...++|.+|+.+|.+++|+|||+++|+|. .++.++|||||++|
T Consensus        22 ~~~iG~G~fg~Vy~~~~~~-~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g   96 (285)
T d1fmka3          22 EVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKG   96 (285)
T ss_dssp             EEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             eeEEeeCCCeEEEEEEECC-CCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCC
Confidence            3789999999999999975 4679999997553 33578999999999999999999999995 56789999999987

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=9.5e-15  Score=126.17  Aligned_cols=79  Identities=27%  Similarity=0.430  Sum_probs=68.4

Q ss_pred             ccceeeeccCceEEEEEEc-----CCCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          196 FKELIGKGGFGKVYKGVLS-----TSGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       196 f~~~lG~G~fG~Vy~g~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.+.||+|+||.||+|.+.     ..+..||||+++.. ......+|.+|+.++.++ +|||||+++|+|...+..+|||
T Consensus        27 l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvm  106 (311)
T d1t46a_          27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT  106 (311)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEE
Confidence            3478999999999999863     24578999999865 445567899999999998 6999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      |||++|
T Consensus       107 E~~~~g  112 (311)
T d1t46a_         107 EYCCYG  112 (311)
T ss_dssp             ECCTTE
T ss_pred             EcCCCC
Confidence            999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.4e-14  Score=123.05  Aligned_cols=74  Identities=30%  Similarity=0.510  Sum_probs=64.1

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      .+.||+|+||.||+|.++   ..||||.++..  +....++|.+|+.+|.+++|||||+++|+|. .+.++||||||++|
T Consensus        13 ~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g   88 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGS   88 (276)
T ss_dssp             CSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEE
T ss_pred             EEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCC
Confidence            378999999999999875   35999999754  4556788999999999999999999999985 45689999999976

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.5e-14  Score=121.76  Aligned_cols=76  Identities=34%  Similarity=0.543  Sum_probs=66.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|....+|+.||||+++...  ......+.+|+.+|.+++|||||++++++...+.++|||||+.+
T Consensus         8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~   85 (298)
T d1gz8a_           8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ   85 (298)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC
Confidence            78999999999999998889999999996542  23356899999999999999999999999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.1e-14  Score=123.78  Aligned_cols=77  Identities=27%  Similarity=0.448  Sum_probs=68.0

Q ss_pred             ceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|.+..     .+..||||+++.. .......|.+|+.++.+++|+|||+++|+|...+..++|||||
T Consensus        26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~  105 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM  105 (308)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeec
Confidence            789999999999998742     2478999999755 4555678999999999999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       106 ~~g  108 (308)
T d1p4oa_         106 TRG  108 (308)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            987

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4e-14  Score=123.64  Aligned_cols=77  Identities=26%  Similarity=0.331  Sum_probs=69.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||+|+++..   .....+.+.+|+.+|.+++|||||++++++.+.+.+++|||||++|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg   90 (337)
T d1o6la_          11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   90 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCC
Confidence            7899999999999999888999999999754   2234567899999999999999999999999999999999999987

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.47  E-value=6.6e-14  Score=118.92  Aligned_cols=77  Identities=21%  Similarity=0.324  Sum_probs=68.1

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---------HHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---------EQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV  267 (274)
                      +.||+|+||+||++....+|..+|||+++...         ....+.+++|+.+|.+++ |||||++++++.+.+.++||
T Consensus         9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~iv   88 (277)
T d1phka_           9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV   88 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEE
Confidence            78999999999999988789999999997542         122346899999999997 99999999999999999999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      ||||++|
T Consensus        89 mE~~~~g   95 (277)
T d1phka_          89 FDLMKKG   95 (277)
T ss_dssp             EECCTTC
T ss_pred             EEcCCCc
Confidence            9999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.47  E-value=7.3e-14  Score=118.46  Aligned_cols=77  Identities=22%  Similarity=0.279  Sum_probs=67.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC----eEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ----ELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~----~~~LV~Ey  270 (274)
                      +.||+|+||.||++.....|+.||||.++..   +......|.+|+.+|.+++|||||++++++...+    .++|||||
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~   92 (277)
T d1o6ya_          13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY   92 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEEC
Confidence            7899999999999998878999999999754   3445668999999999999999999999997654    37999999


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      |++|
T Consensus        93 ~~g~   96 (277)
T d1o6ya_          93 VDGV   96 (277)
T ss_dssp             CCEE
T ss_pred             CCCC
Confidence            9875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.1e-14  Score=123.16  Aligned_cols=77  Identities=26%  Similarity=0.450  Sum_probs=64.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHH-----hHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQ-----WMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ++||+|+||+||+|....+|+.||||+++.....     ..+.+.+|+.+|.+++|||||++++++...+.++|||||++
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            6899999999999999888999999998654221     13468999999999999999999999999999999999997


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        84 ~~   85 (299)
T d1ua2a_          84 TD   85 (299)
T ss_dssp             EE
T ss_pred             ch
Confidence            64

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=4.9e-14  Score=119.31  Aligned_cols=77  Identities=23%  Similarity=0.446  Sum_probs=65.3

Q ss_pred             cceeeeccCceEEEEEEcCC---CceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          197 KELIGKGGFGKVYKGVLSTS---GLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~---g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      .+.||+|+||.||+|.....   +..||||.++.. .....+.|.+|+.+|.+++|||||+++|+|. .+.++||||||+
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~   90 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT   90 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEecc
Confidence            37899999999999987533   356899998754 4455678999999999999999999999995 567899999998


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        91 ~g   92 (273)
T d1mp8a_          91 LG   92 (273)
T ss_dssp             TE
T ss_pred             CC
Confidence            76

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.3e-14  Score=123.45  Aligned_cols=78  Identities=27%  Similarity=0.486  Sum_probs=64.8

Q ss_pred             cceeeeccCceEEEEEEcCCC-----ceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEEe
Q 045713          197 KELIGKGGFGKVYKGVLSTSG-----LPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      .++||+|+||.||+|.....+     ..||||.+... .......|.+|+.+|.++ +|||||+++|+|...+.++||||
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E  121 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE  121 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEE
Confidence            379999999999999975433     36999999754 334456899999999998 89999999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||++|
T Consensus       122 y~~~g  126 (325)
T d1rjba_         122 YCCYG  126 (325)
T ss_dssp             CCTTC
T ss_pred             cCCCC
Confidence            99987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.2e-13  Score=119.40  Aligned_cols=76  Identities=29%  Similarity=0.543  Sum_probs=61.4

Q ss_pred             ceeeeccCceEEEEEEcCCCc----eEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGL----PIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~  272 (274)
                      ++||+|+||.||+|.....|.    .||+|.++.. +....++|.+|+.+|.+++|||||+++|+|.+. ..++++||+.
T Consensus        15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~   93 (317)
T d1xkka_          15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP   93 (317)
T ss_dssp             EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred             eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEecc
Confidence            799999999999999865554    5899998754 445578899999999999999999999999864 5677888887


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        94 ~~   95 (317)
T d1xkka_          94 FG   95 (317)
T ss_dssp             TC
T ss_pred             CC
Confidence            75

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=9.8e-14  Score=120.24  Aligned_cols=77  Identities=23%  Similarity=0.419  Sum_probs=66.8

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHHHHHHHHhc-CCCCCCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEFVSEIVSMG-ALRHRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~-~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|....++..||||+++...   ....+.++.|..++. .++|||||++++++...+.++||||||++
T Consensus         8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~   87 (320)
T d1xjda_           8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG   87 (320)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             eEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCC
Confidence            79999999999999998889999999996531   233456788887765 58999999999999999999999999998


Q ss_pred             C
Q 045713          274 K  274 (274)
Q Consensus       274 G  274 (274)
                      |
T Consensus        88 g   88 (320)
T d1xjda_          88 G   88 (320)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.2e-13  Score=117.09  Aligned_cols=72  Identities=33%  Similarity=0.534  Sum_probs=58.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHH--HHHHHhcCCCCCCccceeeEEEeCC----eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFV--SEIVSMGALRHRNLVQLHGYCRRKQ----ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~--~E~~~l~~l~H~Nlv~l~g~~~~~~----~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|++.  |..||||.++...   .+++.  .|+..+.+++|||||+++|+|...+    .++||||||
T Consensus         9 ~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_           9 ESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEEECCSSSEEEEEEET--TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEeeCCCeEEEEEEEC--CEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            78999999999999985  7899999996542   23444  4555566889999999999998754    579999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        84 ~~g   86 (303)
T d1vjya_          84 EHG   86 (303)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=6.5e-14  Score=118.71  Aligned_cols=76  Identities=32%  Similarity=0.529  Sum_probs=56.9

Q ss_pred             ceeeeccCceEEEEEEcCC-C--ceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTS-G--LPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-g--~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      +.||+|+||.||+|.+... +  ..||||.++..   ..+..++|.+|+.+|.+++|||||+++|+|.+ +..++|||||
T Consensus        14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~   92 (273)
T d1u46a_          14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELA   92 (273)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeee
Confidence            7899999999999987432 2  47899998754   33446789999999999999999999999965 5678999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        93 ~~~   95 (273)
T d1u46a_          93 PLG   95 (273)
T ss_dssp             TTC
T ss_pred             cCc
Confidence            876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.3e-13  Score=113.43  Aligned_cols=77  Identities=29%  Similarity=0.504  Sum_probs=69.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||+||+|....++..||||+++..  .......+.+|+.+|.+++|+||+++.++|...+..++++||+.+|
T Consensus         8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~   86 (292)
T d1unla_           8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD   86 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEE
T ss_pred             eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccc
Confidence            7899999999999999888999999999754  3345678999999999999999999999999999999999998753

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=3.8e-13  Score=117.89  Aligned_cols=77  Identities=22%  Similarity=0.304  Sum_probs=68.9

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC---CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD---SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||++....+|..||||++...   .....+.+.+|+.+|.+++|||||++++++...+..++|+||+.+|
T Consensus        47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g  126 (350)
T d1rdqe_          47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG  126 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccccccccc
Confidence            7899999999999999888999999999643   1233567899999999999999999999999999999999999886

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.39  E-value=4.3e-13  Score=118.12  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=64.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC---HHhHHHH---HHHHHHhcCCCCCCccceeeEEEeCCeEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS---EQWMKEF---VSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~---~~~~~~f---~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~  271 (274)
                      ++||+|+||.||++....+|..||||++....   ......+   ..|+.++..++|||||++++++...+.++||||||
T Consensus        10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~   89 (364)
T d1omwa3          10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM   89 (364)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEec
Confidence            79999999999999998889999999996431   1122233   34577888999999999999999999999999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus        90 ~gg   92 (364)
T d1omwa3          90 NGG   92 (364)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.37  E-value=4.3e-13  Score=114.01  Aligned_cols=76  Identities=33%  Similarity=0.503  Sum_probs=67.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCC--HHhHHHHHHHHHHhcCCCCCCccceeeEEEeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS--EQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|..+ .|..||||.++...  ....+.|.+|+.+|.+++|||||+++++|...+..++++||+.+|
T Consensus         8 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~   85 (286)
T d1ob3a_           8 EKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD   85 (286)
T ss_dssp             EEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEE
T ss_pred             cEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhh
Confidence            78999999999999986 57999999997653  223568999999999999999999999999999999999998753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=3.5e-13  Score=115.54  Aligned_cols=77  Identities=26%  Similarity=0.499  Sum_probs=62.0

Q ss_pred             ceeeeccCceEEEEEEcCC-------CceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCCeEEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTS-------GLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQELLLVY  268 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~-------g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~~~~LV~  268 (274)
                      +.||+|+||.||+|.....       +..||||+++.+ ......++.+|...+.++ +|+|||+++|+|.+.+.+++||
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~   98 (299)
T d1fgka_          19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV   98 (299)
T ss_dssp             EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEE
Confidence            7899999999999987432       257999999776 445568899999999888 8999999999999999999999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      |||++|
T Consensus        99 e~~~~g  104 (299)
T d1fgka_          99 EYASKG  104 (299)
T ss_dssp             CCCTTC
T ss_pred             EccCCC
Confidence            999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=7.8e-13  Score=115.96  Aligned_cols=77  Identities=26%  Similarity=0.378  Sum_probs=65.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC------CeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK------QELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~------~~~~LV~E  269 (274)
                      ++||+|+||+||+|....+|..||||++...  .......+.+|+.++.+++|||||++++++...      ..+|+|||
T Consensus        23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~E  102 (355)
T d2b1pa1          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME  102 (355)
T ss_dssp             EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEe
Confidence            7899999999999999888999999999754  445566799999999999999999999999643      57899999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||.+|
T Consensus       103 y~~~~  107 (355)
T d2b1pa1         103 LMDAN  107 (355)
T ss_dssp             CCSEE
T ss_pred             ccchH
Confidence            99753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.8e-12  Score=112.77  Aligned_cols=72  Identities=17%  Similarity=0.180  Sum_probs=61.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcC-CCCCCccceeeEEEe----CCeEEEEEeccC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGA-LRHRNLVQLHGYCRR----KQELLLVYNYMH  272 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~Nlv~l~g~~~~----~~~~~LV~Ey~~  272 (274)
                      ++||+|+||.||+|....++..||||.++..     ..+.+|+.++.+ ++|||||++++++..    ...++||||||+
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~   92 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   92 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCC
Confidence            4699999999999999878999999999653     356789988765 489999999999865    356899999999


Q ss_pred             CC
Q 045713          273 NK  274 (274)
Q Consensus       273 ~G  274 (274)
                      +|
T Consensus        93 gg   94 (335)
T d2ozaa1          93 GG   94 (335)
T ss_dssp             SE
T ss_pred             CC
Confidence            86

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.7e-12  Score=113.21  Aligned_cols=75  Identities=27%  Similarity=0.468  Sum_probs=60.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~E  269 (274)
                      +.||+|+||.||+|.....|..||||+++..  .....+.+.+|+.+|.+++|+|+|+++++|...+      .++||||
T Consensus        24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  103 (346)
T d1cm8a_          24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP  103 (346)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEe
Confidence            7899999999999999888999999999754  4455678999999999999999999999997654      4799999


Q ss_pred             ccC
Q 045713          270 YMH  272 (274)
Q Consensus       270 y~~  272 (274)
                      |+.
T Consensus       104 ~~~  106 (346)
T d1cm8a_         104 FMG  106 (346)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            984

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.7e-12  Score=111.86  Aligned_cols=77  Identities=31%  Similarity=0.570  Sum_probs=63.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC--------CeEEEE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK--------QELLLV  267 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~--------~~~~LV  267 (274)
                      +.||+|+||+||+|....+|+.||||++...  .....+++.+|+.+|.+++|+|++++++.|...        +.+++|
T Consensus        16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv   95 (318)
T d3blha1          16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV   95 (318)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEE
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEE
Confidence            7899999999999999888999999998644  233456789999999999999999999998653        457999


Q ss_pred             EeccCCC
Q 045713          268 YNYMHNK  274 (274)
Q Consensus       268 ~Ey~~~G  274 (274)
                      |||+++|
T Consensus        96 ~e~~~~~  102 (318)
T d3blha1          96 FDFCEHD  102 (318)
T ss_dssp             EECCCEE
T ss_pred             EeccCCC
Confidence            9999753

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2e-12  Score=113.11  Aligned_cols=73  Identities=34%  Similarity=0.501  Sum_probs=61.6

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC------eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ------ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~------~~~LV~Ey~  271 (274)
                      ++||+|+||+||+|....+|..||||++.....    .+.+|+.+|.+++|+||++++++|....      .++||||||
T Consensus        26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~  101 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV  101 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECC
T ss_pred             eEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEecc
Confidence            689999999999999988899999999976532    2346999999999999999999996532      378999999


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      ++|
T Consensus       102 ~~~  104 (350)
T d1q5ka_         102 PET  104 (350)
T ss_dssp             SEE
T ss_pred             CCc
Confidence            864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.28  E-value=3.9e-12  Score=110.07  Aligned_cols=74  Identities=22%  Similarity=0.372  Sum_probs=65.0

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeC--CeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRK--QELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~--~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||+||+|.....|..||||+++...   .+++.+|+.+|.+++ |+||+++++++...  ..+++|||||.+|
T Consensus        41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~  117 (328)
T d3bqca1          41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT  117 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCC
Confidence            78999999999999998889999999997643   457889999999985 99999999999754  4589999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.5e-12  Score=110.00  Aligned_cols=76  Identities=25%  Similarity=0.507  Sum_probs=64.7

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCH------HhHHHHHHHHHHhcCCC--CCCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSE------QWMKEFVSEIVSMGALR--HRNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~--H~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      ++||+|+||.||+|....+|..||||.++....      .....+.+|+.+|.+++  |+|||++++++...+..++|||
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e   89 (273)
T d1xwsa_          10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE   89 (273)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEE
Confidence            789999999999999988899999999964311      11234678999999886  9999999999999999999999


Q ss_pred             ccCC
Q 045713          270 YMHN  273 (274)
Q Consensus       270 y~~~  273 (274)
                      |+.+
T Consensus        90 ~~~~   93 (273)
T d1xwsa_          90 RPEP   93 (273)
T ss_dssp             CCSS
T ss_pred             eccC
Confidence            9865

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=8.8e-12  Score=106.43  Aligned_cols=78  Identities=22%  Similarity=0.398  Sum_probs=62.4

Q ss_pred             cceeeeccCceEEEEEEcC-----CCceEEEEEEccC-CHHhHHHHHHHHHHhcCC-CCCCccceeeEEEeCC-eEEEEE
Q 045713          197 KELIGKGGFGKVYKGVLST-----SGLPIAVKKISHD-SEQWMKEFVSEIVSMGAL-RHRNLVQLHGYCRRKQ-ELLLVY  268 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~-----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~Nlv~l~g~~~~~~-~~~LV~  268 (274)
                      .+.||+|+||.||+|....     .++.||||.++.. .....+.+.+|...+.++ +|+|||.+.++|...+ .+++||
T Consensus        18 ~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~   97 (299)
T d1ywna1          18 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV   97 (299)
T ss_dssp             EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred             eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEE
Confidence            3789999999999998743     2367999999765 445567889999888876 6899999999987654 689999


Q ss_pred             eccCCC
Q 045713          269 NYMHNK  274 (274)
Q Consensus       269 Ey~~~G  274 (274)
                      |||++|
T Consensus        98 E~~~~g  103 (299)
T d1ywna1          98 EFCKFG  103 (299)
T ss_dssp             ECCTTC
T ss_pred             EecCCC
Confidence            999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=2.2e-11  Score=106.12  Aligned_cols=76  Identities=24%  Similarity=0.395  Sum_probs=59.5

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC-CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeCC-----eEEEEEecc
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD-SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRKQ-----ELLLVYNYM  271 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~~-----~~~LV~Ey~  271 (274)
                      +.||+|+||+||+|....+|..||||+++.. .....+.+++|+.+|.+++|+|+++++++|....     ..+|++ |+
T Consensus        14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~-~~   92 (345)
T d1pmea_          14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT-HL   92 (345)
T ss_dssp             EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE-EC
T ss_pred             EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEE-ee
Confidence            7899999999999998888999999999754 4455678999999999999999999999997643     245554 45


Q ss_pred             CCC
Q 045713          272 HNK  274 (274)
Q Consensus       272 ~~G  274 (274)
                      .+|
T Consensus        93 ~~g   95 (345)
T d1pmea_          93 MGA   95 (345)
T ss_dssp             CCE
T ss_pred             cCC
Confidence            443

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4.5e-12  Score=109.66  Aligned_cols=77  Identities=22%  Similarity=0.358  Sum_probs=65.4

Q ss_pred             ceeeeccCceEEEEEE---cCCCceEEEEEEccC----CHHhHHHHHHHHHHhcCCCC-CCccceeeEEEeCCeEEEEEe
Q 045713          198 ELIGKGGFGKVYKGVL---STSGLPIAVKKISHD----SEQWMKEFVSEIVSMGALRH-RNLVQLHGYCRRKQELLLVYN  269 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~---~~~g~~vAvK~l~~~----~~~~~~~f~~E~~~l~~l~H-~Nlv~l~g~~~~~~~~~LV~E  269 (274)
                      +.||+|+||.||++..   +..|..||||.++..    .....+.+.+|+.+|.+++| +||+++++++......++++|
T Consensus        30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e  109 (322)
T d1vzoa_          30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD  109 (322)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEEC
T ss_pred             EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeee
Confidence            7999999999999986   345789999998643    11234568899999999977 799999999999999999999


Q ss_pred             ccCCC
Q 045713          270 YMHNK  274 (274)
Q Consensus       270 y~~~G  274 (274)
                      ||.+|
T Consensus       110 ~~~~~  114 (322)
T d1vzoa_         110 YINGG  114 (322)
T ss_dssp             CCCSC
T ss_pred             ccccc
Confidence            99876

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.2e-11  Score=107.56  Aligned_cols=77  Identities=22%  Similarity=0.318  Sum_probs=63.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccC--CHHhHHHHHHHHHHhcCCCCCCccceeeEEEeC-----CeEEEEEec
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHD--SEQWMKEFVSEIVSMGALRHRNLVQLHGYCRRK-----QELLLVYNY  270 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~~~~-----~~~~LV~Ey  270 (274)
                      +.||+|+||.||+|....+|..||||+++..  +....+.+.+|+.+|.+++|+|+|++++++...     ...++++||
T Consensus        24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~  103 (348)
T d2gfsa1          24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH  103 (348)
T ss_dssp             EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEe
Confidence            7899999999999998878999999999754  345567899999999999999999999998643     234566667


Q ss_pred             cCCC
Q 045713          271 MHNK  274 (274)
Q Consensus       271 ~~~G  274 (274)
                      +.+|
T Consensus       104 ~~gg  107 (348)
T d2gfsa1         104 LMGA  107 (348)
T ss_dssp             CCSE
T ss_pred             ecCC
Confidence            6654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.5e-11  Score=105.17  Aligned_cols=81  Identities=26%  Similarity=0.473  Sum_probs=60.2

Q ss_pred             cCcc--ceeeeccCceEEEEEEcC-CCceEEEEEEccC--CHHhHHHHHHHHHHhcCC---CCCCccceeeEEEe-----
Q 045713          194 KGFK--ELIGKGGFGKVYKGVLST-SGLPIAVKKISHD--SEQWMKEFVSEIVSMGAL---RHRNLVQLHGYCRR-----  260 (274)
Q Consensus       194 ~~f~--~~lG~G~fG~Vy~g~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l---~H~Nlv~l~g~~~~-----  260 (274)
                      ++|.  +.||+|+||.||++.... ++..||||+++..  .......+.+|+.+|..|   +||||++++++|..     
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            3454  789999999999999754 3567999998643  222233466777666554   89999999999864     


Q ss_pred             CCeEEEEEeccCCC
Q 045713          261 KQELLLVYNYMHNK  274 (274)
Q Consensus       261 ~~~~~LV~Ey~~~G  274 (274)
                      ...+++++||+.+|
T Consensus        87 ~~~~~~~~e~~~~~  100 (305)
T d1blxa_          87 ETKLTLVFEHVDQD  100 (305)
T ss_dssp             EEEEEEEEECCSCB
T ss_pred             CceEEEEEEeccCC
Confidence            23579999999875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.02  E-value=2.9e-10  Score=96.75  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=61.4

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCCCCccceeeEE-EeCCeEEEEEeccCCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRHRNLVQLHGYC-RRKQELLLVYNYMHNK  274 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~-~~~~~~~LV~Ey~~~G  274 (274)
                      +.||+|+||.||+|....+|..||||.+.....  ..++..|+.++.+++|+|++.++++| ...+..++||||+.++
T Consensus        13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~   88 (299)
T d1ckia_          13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPS   88 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCB
T ss_pred             EEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCc
Confidence            789999999999999988889999999876432  24578899999999888776666555 6677889999999653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.98  E-value=4.6e-10  Score=95.38  Aligned_cols=74  Identities=18%  Similarity=0.275  Sum_probs=62.2

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCCC-CCccceeeEEEeCCeEEEEEeccCC
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALRH-RNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +.||+|+||.||+|.....|..||||.++....  ..++.+|+..+..++| +|++.+.+++......++||||+.+
T Consensus        11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~~   85 (293)
T d1csna_          11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGP   85 (293)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecCC
Confidence            789999999999999887889999999865421  2346677788888865 8999999999999999999999853

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=5.7e-08  Score=84.12  Aligned_cols=74  Identities=16%  Similarity=0.230  Sum_probs=58.3

Q ss_pred             ceeeeccCceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-----------CCCccceeeEEEeC--CeE
Q 045713          198 ELIGKGGFGKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-----------HRNLVQLHGYCRRK--QEL  264 (274)
Q Consensus       198 ~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~Nlv~l~g~~~~~--~~~  264 (274)
                      ++||+|+||+||+|....+|..||||+++.. ....+.+.+|+.++.+++           |+||+++++++...  ...
T Consensus        19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~   97 (362)
T d1q8ya_          19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV   97 (362)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccce
Confidence            7899999999999999888999999999764 233457788888877664           57899999988653  456


Q ss_pred             EEEEeccC
Q 045713          265 LLVYNYMH  272 (274)
Q Consensus       265 ~LV~Ey~~  272 (274)
                      +++++++.
T Consensus        98 ~~~~~~~~  105 (362)
T d1q8ya_          98 HVVMVFEV  105 (362)
T ss_dssp             EEEEEECC
T ss_pred             eeeeeecc
Confidence            66666654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.48  E-value=1.2e-07  Score=74.74  Aligned_cols=72  Identities=11%  Similarity=0.068  Sum_probs=54.2

Q ss_pred             cceeeeccCceEEEEEEcCCCceEEEEEEccCC------------------HHhHHHHHHHHHHhcCCCCCCccceeeEE
Q 045713          197 KELIGKGGFGKVYKGVLSTSGLPIAVKKISHDS------------------EQWMKEFVSEIVSMGALRHRNLVQLHGYC  258 (274)
Q Consensus       197 ~~~lG~G~fG~Vy~g~~~~~g~~vAvK~l~~~~------------------~~~~~~f~~E~~~l~~l~H~Nlv~l~g~~  258 (274)
                      .+.||+|+||.||+|... +|..||||.++...                  .........|...+.++.|.|++..+++.
T Consensus         5 g~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             CCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            378999999999999886 47899999875321                  01123456788889999999999877653


Q ss_pred             EeCCeEEEEEeccCC
Q 045713          259 RRKQELLLVYNYMHN  273 (274)
Q Consensus       259 ~~~~~~~LV~Ey~~~  273 (274)
                        .  .+|+|||+++
T Consensus        84 --~--~~lvme~~~~   94 (191)
T d1zara2          84 --G--NAVLMELIDA   94 (191)
T ss_dssp             --T--TEEEEECCCC
T ss_pred             --C--CEEEEEeecc
Confidence              2  3799999875

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.42  E-value=2e-07  Score=75.61  Aligned_cols=70  Identities=21%  Similarity=0.280  Sum_probs=50.0

Q ss_pred             CCCcEEEEEEeeCCCcEEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           22 SGNPMQIWIDYNGEEKLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        22 ~g~~~~awi~y~~~~~~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      ++..+++||+|+  .+.|+|++..........+.....++ ...+++++|+||||+||...+.|.|++|.+..
T Consensus       156 ~~~~~~i~~~~~--~~~l~v~i~~~~~~~~~~~~~~~~~~-~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~~~  225 (228)
T d1gv9a_         156 KPYPVRAKITYY--QKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFLTFQ  225 (228)
T ss_dssp             CSSCEEEEEEEE--TTEEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEEEEE
T ss_pred             CceEEEEEEEec--CCEEEEEEeccccCCCcceeEEEEec-ccccCCCEEEEEEEeCCCCcCeEEEEEEEEEE
Confidence            344667777776  57899998765443333333333333 55689999999999999999999999987753

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.09  E-value=0.00037  Score=55.52  Aligned_cols=64  Identities=19%  Similarity=0.250  Sum_probs=43.9

Q ss_pred             CCCcEEEEEEeeCCCc-EEEEEEEeCCCCCCCCCee-eeecCcccccccceeEeEEeeecCcccceeEecccccc
Q 045713           22 SGNPMQIWIDYNGEEK-LLNVTLAPIRVSKPNRPLL-STPLDLSQILLDTMHVGFSASTGILTSNQYILGWSFSR   94 (274)
Q Consensus        22 ~g~~~~awi~y~~~~~-~l~v~~~~~~~~~~~~~~l-s~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~WsF~s   94 (274)
                      ++.+.++.|.|+..++ .|.|.+.  +     +.++ ...++|  ..++++|+||||+||...+.|.|++|.+..
T Consensus       149 ~~~~~~~~i~Y~~~~~~~l~v~id--~-----~~c~~t~~i~l--p~~~~~yfG~SA~Tg~~~d~~dIls~~~~~  214 (218)
T d2a6va1         149 SMVPSTLRLTYNPLDNHLLKLQMD--N-----RVCFQTRKVKF--MGSSPFRIGTSAINDASKESFEILKMKLYD  214 (218)
T ss_dssp             CSSCEEEEEEEEGGGTSEEEEEET--T-----EEEEEESCCCG--GGTSCBEEEEEEECCTTCCEEEEEEEEEES
T ss_pred             CCCcEEEEEEEECcccceEEEEeC--C-----cEEEEECCeec--CCCCcEEEEEEECCCCCcCcEEEEEEEEEe
Confidence            4567778888876553 4666552  1     1122 223444  335679999999999999999999998864

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.33  E-value=0.0012  Score=52.49  Aligned_cols=60  Identities=20%  Similarity=0.314  Sum_probs=38.6

Q ss_pred             CCCcEEEEEEeeCCCc-EEEEEEEeCCCCCCCCCeeeeecCcccccccceeEeEEeeecCcccceeEecc
Q 045713           22 SGNPMQIWIDYNGEEK-LLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMHVGFSASTGILTSNQYILGW   90 (274)
Q Consensus        22 ~g~~~~awi~y~~~~~-~l~v~~~~~~~~~~~~~~ls~~~dl~~~l~~~~~vGfsastg~~~~~~~i~~W   90 (274)
                      ++...+++|+|+..++ .|.|.+..       +..+.  ++--.+.++..|+||||+||...+.|.++.+
T Consensus       152 ~~~~~~~~I~y~~~~~~~l~v~id~-------~~c~~--~~~v~lp~~~~~fG~SA~TG~~~~~hd~~~i  212 (221)
T d2a6za1         152 SSVPSTIRVTYDLEDDNLLKVQVDN-------KVCFQ--TRKVRFPSGSYRIGVTAQNGAVNNNAESFEI  212 (221)
T ss_dssp             EEEEEEEEEEEEGGGTSEEEEEETT-------EEEEE--ESCCCCCSSEEEEEEEEECCSGGGCCCEEEE
T ss_pred             CCCCEEEEEEEecCccceEEEEecC-------cEeEE--ECCeecCCCCEEEEEEEccCCccCCCceEEE
Confidence            4556789999987654 47777631       11121  2222233557899999999998888875543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.05  E-value=0.78  Score=35.54  Aligned_cols=70  Identities=17%  Similarity=0.023  Sum_probs=46.1

Q ss_pred             eccC-ceEEEEEEcCCCceEEEEEEccCCHHhHHHHHHHHHHhcCCC-CCCccceeeEEEeCCeEEEEEeccCC
Q 045713          202 KGGF-GKVYKGVLSTSGLPIAVKKISHDSEQWMKEFVSEIVSMGALR-HRNLVQLHGYCRRKQELLLVYNYMHN  273 (274)
Q Consensus       202 ~G~f-G~Vy~g~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~Nlv~l~g~~~~~~~~~LV~Ey~~~  273 (274)
                      +|.. ..||+....  +..+.+|+...........+.+|...+..+. +--+-+++.++...+..++|||++++
T Consensus        23 ~G~s~~~v~rv~~~--~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G   94 (263)
T d1j7la_          23 EGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             CCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             CCCCCCcEEEEEeC--CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccc
Confidence            3443 579987643  5667888876543222334566776655442 33356778888888889999999875