Query 045717
Match_columns 374
No_of_seqs 256 out of 2349
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 04:50:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045717.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045717hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1153 Subtilisin-related pro 100.0 3.2E-41 7E-46 314.9 14.5 288 29-367 78-407 (501)
2 cd04852 Peptidases_S8_3 Peptid 100.0 6.7E-38 1.5E-42 297.3 22.9 217 116-336 2-235 (307)
3 PTZ00262 subtilisin-like prote 100.0 2.2E-37 4.7E-42 308.2 17.8 234 123-374 293-555 (639)
4 cd07479 Peptidases_S8_SKI-1_li 100.0 7.7E-36 1.7E-40 275.4 16.8 171 135-349 1-174 (255)
5 cd07476 Peptidases_S8_thiazoli 100.0 2.3E-35 4.9E-40 273.7 18.8 183 134-351 2-184 (267)
6 cd07491 Peptidases_S8_7 Peptid 100.0 3.1E-35 6.8E-40 269.6 17.2 181 141-363 2-197 (247)
7 cd07485 Peptidases_S8_Fervidol 100.0 6.5E-34 1.4E-38 265.6 19.7 203 133-358 1-215 (273)
8 cd05561 Peptidases_S8_4 Peptid 100.0 3.8E-34 8.2E-39 261.7 17.6 187 144-374 1-190 (239)
9 cd07483 Peptidases_S8_Subtilis 100.0 4.5E-34 9.8E-39 268.7 18.4 214 142-372 1-253 (291)
10 cd07484 Peptidases_S8_Thermita 100.0 8.6E-34 1.9E-38 262.9 18.7 188 131-358 18-206 (260)
11 cd04077 Peptidases_S8_PCSK9_Pr 100.0 8.4E-34 1.8E-38 262.3 18.4 177 134-358 17-200 (255)
12 cd07475 Peptidases_S8_C5a_Pept 100.0 5.7E-33 1.2E-37 267.9 18.8 211 134-351 2-244 (346)
13 cd07496 Peptidases_S8_13 Pepti 100.0 4.4E-33 9.5E-38 261.6 17.5 201 143-360 1-222 (285)
14 cd07497 Peptidases_S8_14 Pepti 100.0 6.2E-33 1.3E-37 262.1 16.8 200 141-351 1-231 (311)
15 cd07498 Peptidases_S8_15 Pepti 100.0 1.6E-32 3.5E-37 251.7 18.3 183 144-359 1-184 (242)
16 cd07481 Peptidases_S8_Bacillop 100.0 2E-32 4.3E-37 254.3 18.6 204 141-373 1-225 (264)
17 cd07477 Peptidases_S8_Subtilis 100.0 3.2E-32 6.8E-37 247.6 17.5 179 143-362 1-183 (229)
18 cd07493 Peptidases_S8_9 Peptid 100.0 8.8E-32 1.9E-36 249.6 18.1 182 143-351 1-196 (261)
19 cd07490 Peptidases_S8_6 Peptid 100.0 2.9E-31 6.2E-36 245.1 17.9 167 143-349 1-172 (254)
20 cd05562 Peptidases_S53_like Pe 100.0 2.4E-31 5.2E-36 247.5 17.4 162 138-345 1-164 (275)
21 cd07487 Peptidases_S8_1 Peptid 100.0 2.5E-31 5.3E-36 246.8 17.4 175 141-350 1-189 (264)
22 cd07489 Peptidases_S8_5 Peptid 100.0 2.5E-31 5.5E-36 252.8 17.6 183 131-351 2-198 (312)
23 cd07473 Peptidases_S8_Subtilis 100.0 2.8E-30 6.1E-35 239.2 19.4 196 142-356 2-205 (259)
24 cd04842 Peptidases_S8_Kp43_pro 100.0 4.6E-30 1E-34 241.9 19.2 191 137-351 2-211 (293)
25 cd04843 Peptidases_S8_11 Pepti 100.0 1.2E-30 2.6E-35 243.1 14.7 189 131-363 4-215 (277)
26 cd07480 Peptidases_S8_12 Pepti 100.0 6E-30 1.3E-34 241.6 18.1 203 137-374 3-236 (297)
27 cd04857 Peptidases_S8_Tripepti 100.0 1.4E-29 3.1E-34 244.4 19.7 160 202-371 182-367 (412)
28 cd07482 Peptidases_S8_Lantibio 100.0 8.5E-30 1.8E-34 240.2 17.7 184 143-350 1-212 (294)
29 cd04059 Peptidases_S8_Protein_ 100.0 4.1E-30 8.8E-35 242.8 14.4 193 131-357 28-234 (297)
30 cd07492 Peptidases_S8_8 Peptid 100.0 1.6E-29 3.6E-34 228.8 17.1 182 143-371 1-183 (222)
31 cd07474 Peptidases_S8_subtilis 100.0 3.9E-29 8.5E-34 235.9 18.8 178 141-349 1-200 (295)
32 cd07478 Peptidases_S8_CspA-lik 100.0 4.9E-29 1.1E-33 247.0 17.3 167 139-317 1-195 (455)
33 cd04847 Peptidases_S8_Subtilis 100.0 2E-29 4.4E-34 237.4 13.9 172 144-350 1-193 (291)
34 cd07494 Peptidases_S8_10 Pepti 100.0 5.9E-29 1.3E-33 234.2 16.4 157 131-337 10-174 (298)
35 cd04848 Peptidases_S8_Autotran 100.0 7.5E-28 1.6E-32 223.3 17.7 183 140-351 1-203 (267)
36 KOG4266 Subtilisin kexin isozy 100.0 9.5E-28 2.1E-32 231.3 14.4 269 29-349 47-366 (1033)
37 PF00082 Peptidase_S8: Subtila 99.9 1.6E-26 3.4E-31 216.5 15.7 178 145-351 1-187 (282)
38 cd00306 Peptidases_S8_S53 Pept 99.9 1.2E-22 2.5E-27 184.5 18.5 181 144-360 1-191 (241)
39 cd07488 Peptidases_S8_2 Peptid 99.9 1.8E-21 3.8E-26 178.3 11.6 141 200-360 32-194 (247)
40 KOG3526 Subtilisin-like propro 99.8 2E-20 4.4E-25 172.0 14.2 178 131-342 150-343 (629)
41 KOG1114 Tripeptidyl peptidase 99.8 1.3E-19 2.7E-24 182.5 15.0 146 204-359 309-473 (1304)
42 COG1404 AprE Subtilisin-like s 99.8 6.9E-19 1.5E-23 176.4 17.5 195 131-359 129-338 (508)
43 cd04056 Peptidases_S53 Peptida 99.3 6.1E-12 1.3E-16 121.9 11.6 106 232-342 82-201 (361)
44 PF05922 Inhibitor_I9: Peptida 98.9 2E-09 4.4E-14 81.3 6.8 81 33-117 1-81 (82)
45 KOG3525 Subtilisin-like propro 98.2 2.1E-06 4.5E-11 84.6 6.6 175 131-340 22-213 (431)
46 COG4934 Predicted protease [Po 97.5 0.001 2.2E-08 71.6 11.5 165 133-334 219-395 (1174)
47 PF10731 Anophelin: Thrombin i 30.8 63 0.0014 22.5 2.8 26 1-26 1-27 (65)
48 PRK03719 ecotin; Provisional 28.3 1.2E+02 0.0026 26.0 4.7 20 24-43 40-59 (166)
49 PF02601 Exonuc_VII_L: Exonucl 25.5 2.6E+02 0.0056 26.4 7.2 76 237-316 39-118 (319)
50 PF14097 SpoVAE: Stage V sporu 23.4 4E+02 0.0087 22.9 6.9 87 260-350 12-111 (180)
51 COG1570 XseA Exonuclease VII, 22.2 4.2E+02 0.0091 26.5 7.9 78 236-317 159-237 (440)
No 1
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-41 Score=314.87 Aligned_cols=288 Identities=20% Similarity=0.247 Sum_probs=223.0
Q ss_pred CCCceEEEEeCCCCCCCCCccccHHHHHHhhccccccCCCCcccccc------------ceEEEec--c-ccceEEEEcC
Q 045717 29 NDLQTYIVYVQEPKHGNFSKEIDLESWYHSFLPATISSNSIDDDHQS------------RMVHCYR--H-VISGFAARLT 93 (374)
Q Consensus 29 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~--~-~~~g~~~~~~ 93 (374)
..+.+|||+|++....+.+ +.+.+++++..........+ +..-. .+...|. . .++++.-.++
T Consensus 78 ~~~~~YiV~f~~~~~q~~~--s~~~~~~~~~h~~s~~~~s~-~~~f~~~d~~~s~~~~~~i~~~f~i~~~~~~~y~~~ft 154 (501)
T KOG1153|consen 78 ALPSRYIVVFKPDASQQKI--SAHNRWVQQSHEVSSGKLSS-EDAFYVKDTSDSKSTFGGIKNVFDIGGRVFRGYTGYFT 154 (501)
T ss_pred ccccceEEEeCCCccHHHH--HhhhHHHHHHhhhhhccccc-cceeEeeccccchhhhcccccccccccchhhccccccc
Confidence 3578999999966554444 66777776655433221110 00001 1333333 2 7788888899
Q ss_pred HHHHHHHhcCCCceEEEecceecccc-----CCCCcccCccCCc-----------ccccCCCCCCccEEEEeecccCCCC
Q 045717 94 AEEVKVMETKSGFISAHVENTLQLHT-----THTPRFLGLHQNS-----------GFWKDSNFGKGVIIGVVDSGIGPTH 157 (374)
Q Consensus 94 ~~~l~~l~~~p~V~~v~~~~~~~~~~-----~~~~~~~~~~~~~-----------~~~~~~~~G~gv~VaViDtGid~~H 157 (374)
.+.+..++++|-++.++++..+.... .|....|++-++. .+.+....|+||+.+|+||||++.|
T Consensus 155 ~~~v~~i~~~p~~~~ve~~~~v~~~~~~~i~~Q~~APwgLaRvsh~~~~~y~~~~~Y~Y~~~aG~gvtaYv~DTGVni~H 234 (501)
T KOG1153|consen 155 GESVCSIRSDPLIKAVEKDSVVEVDKISTIMLQNNAPWGLARVSHREKLKYDSWGNYVYEIDAGKGVTAYVLDTGVNIEH 234 (501)
T ss_pred cceeeeeccCcceeecccccccccccccceecccCCchhhhhhcccccccccchheEEeecccCCCeEEEEecccccccc
Confidence 99999999999999999988776654 4455556665521 1222344899999999999999999
Q ss_pred CCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCCCCCCcccCCCccccccc
Q 045717 158 PSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMA 237 (374)
Q Consensus 158 pdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvA 237 (374)
|||.+| ..| +..+..+ ....|++||||||||+|++++ .|||
T Consensus 235 ~dFegR------a~w------------------Ga~i~~~-~~~~D~nGHGTH~AG~I~sKt--------------~GvA 275 (501)
T KOG1153|consen 235 PDFEGR------AIW------------------GATIPPK-DGDEDCNGHGTHVAGLIGSKT--------------FGVA 275 (501)
T ss_pred cccccc------eec------------------ccccCCC-CcccccCCCcceeeeeeeccc--------------cccc
Confidence 999987 444 1112211 556789999999999999986 8999
Q ss_pred ccceEeeeecccCCCCC-CCHHHHHHHHHHHHHC---------CCcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhCCcE
Q 045717 238 PLAHLAMYKACDDYNGT-CPESSVSAALDAAIED---------GVDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKKGIF 307 (374)
Q Consensus 238 p~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~---------~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~ 307 (374)
.+++|+++||++++ | +..+++++++||+.++ +..|.|||+|+.. +..++-++ .+|.+.|+.
T Consensus 276 K~s~lvaVKVl~~d--GsGt~Sdvi~GvE~~~k~h~~~k~~~~k~sv~NlSlGg~~---S~aLn~AV----~~A~~~Gi~ 346 (501)
T KOG1153|consen 276 KNSNLVAVKVLRSD--GSGTVSDVIKGVEFVVKHHEKKKKKEGKKSVANLSLGGFR---SAALNMAV----NAASERGIH 346 (501)
T ss_pred cccceEEEEEeccC--CcEeHHHHHhHHHHHHHHhhhhhcccCCCeEEEEecCCcc---cHHHHHHH----HHHhhcCeE
Confidence 99999999999999 7 8999999999999986 4789999999988 55554444 499999999
Q ss_pred EEEecCCCCCCCCCC-CCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeeccccCCCCCC
Q 045717 308 VSISAGNWGPKPFSV-VNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLLQWTDIPSE 367 (374)
Q Consensus 308 vV~AAGN~g~~~~~~-p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~~~~~~~~~ 367 (374)
+++||||+..++|.+ |++++++|||||+|..++++.|||||+.+++=.+++..-++|-++
T Consensus 347 fa~AAGNe~eDAC~~SPass~~aITVGAst~~D~iA~FSN~G~CVdiFAPGv~IlSs~iGs 407 (501)
T KOG1153|consen 347 FAVAAGNEHEDACNSSPASSKKAITVGASTKNDTIAFFSNWGKCVDIFAPGVNILSSWIGS 407 (501)
T ss_pred EEEcCCCcchhhhccCcccccccEEecccccccchhhhcCccceeeeecCchhhhhhhhcC
Confidence 999999999999976 799999999999999999999999999999998888877776553
No 2
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=6.7e-38 Score=297.26 Aligned_cols=217 Identities=52% Similarity=0.790 Sum_probs=184.3
Q ss_pred ccccCCCCcccCccCCcc--cccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCC---cCCceeee
Q 045717 116 QLHTTHTPRFLGLHQNSG--FWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGA---GCNNKIIG 190 (374)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~--~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~---~~~~~i~~ 190 (374)
+++.++.+.++++....+ +|..+.+|+||+|+|||||||++||+|.++...+.+..|.+.+..+..+ .+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~g 81 (307)
T cd04852 2 QLHTTRSPDFLGLPGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFNPFSCNNKLIG 81 (307)
T ss_pred CccccCCHHHcCCCCCCCcccccccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcCccCcCCeEEE
Confidence 567778888888877544 4778999999999999999999999999999999999999999888776 48999999
Q ss_pred eeeCCCCC------------CCCCCCCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHH
Q 045717 191 ARNFLNKS------------EPPTDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPES 258 (374)
Q Consensus 191 ~~~~~~~~------------~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s 258 (374)
.++|.++. ..+.|..||||||||||+|...++....+...+.+.||||+|+|+.+|+++.. ..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~~~~~~~~~GvAP~a~l~~~kv~~~~-~~~~~~ 160 (307)
T cd04852 82 ARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPD-GGCFGS 160 (307)
T ss_pred EEEcccchhhccCcccccCCCCCccCCCCchhhhhhhcCCCcccccccccccccEEEECCCCeEEEEEEecCC-CCccHH
Confidence 99987653 34478899999999999998766555555555667899999999999999884 148899
Q ss_pred HHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCCEEEEeeec
Q 045717 259 SVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPFSVVNDAPWMLTVGAST 336 (374)
Q Consensus 259 ~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~ 336 (374)
+++++++|+++++++|||||||... ...+.+.+..+...+.++|++||+||||+|.....+|+..+++|+|||++
T Consensus 161 ~~~~ai~~a~~~g~~Vin~S~G~~~---~~~~~~~~~~~~~~a~~~gilvV~aAGN~g~~~~~~~~~~~~vi~Vga~~ 235 (307)
T cd04852 161 DILAAIDQAIADGVDVISYSIGGGS---PDPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAAST 235 (307)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCC---CCcccCHHHHHHHHHHhCCCEEEEECCCCCCCCCcccCCCCCeEEEEecc
Confidence 9999999999999999999999865 22344555556668899999999999999988888899999999999988
No 3
>PTZ00262 subtilisin-like protease; Provisional
Probab=100.00 E-value=2.2e-37 Score=308.24 Aligned_cols=234 Identities=19% Similarity=0.180 Sum_probs=164.4
Q ss_pred CcccCccC--Cccccc--CCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCC-cCCceeeeeeeCCCC
Q 045717 123 PRFLGLHQ--NSGFWK--DSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGA-GCNNKIIGARNFLNK 197 (374)
Q Consensus 123 ~~~~~~~~--~~~~~~--~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~-~~~~~i~~~~~~~~~ 197 (374)
..+|+++. ++++|. .+.+|+||+|||||||||++||||.++-...... ..+......+. ...+ -..+++|.++
T Consensus 293 ~~qWgLd~i~~~~aw~~~~~~~g~gV~VAVIDTGID~~HPDL~~ni~~n~~e-l~GrdgiDdD~nG~vd-d~~G~nfVd~ 370 (639)
T PTZ00262 293 NLQWGLDLTRLDETQELIEPHEVNDTNICVIDSGIDYNHPDLHDNIDVNVKE-LHGRKGIDDDNNGNVD-DEYGANFVNN 370 (639)
T ss_pred ccCcCcchhCchHHHHHhhccCCCCcEEEEEccCCCCCChhhhhhccccccc-ccCccccccccCCccc-ccccccccCC
Confidence 34577764 455665 3568999999999999999999998752111000 00100000000 0001 1235778877
Q ss_pred CCCCCCCCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEE
Q 045717 198 SEPPTDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLS 276 (374)
Q Consensus 198 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin 276 (374)
...+.|++||||||||||||...++. .+.||||+|+|+++|+++.. + +..++++.||+||++++++|||
T Consensus 371 ~~~P~D~~GHGTHVAGIIAA~gnN~~--------Gi~GVAP~AkLi~vKVld~~--G~G~~sdI~~AI~yA~~~GA~VIN 440 (639)
T PTZ00262 371 DGGPMDDNYHGTHVSGIISAIGNNNI--------GIVGVDKRSKLIICKALDSH--KLGRLGDMFKCFDYCISREAHMIN 440 (639)
T ss_pred CCCCCCCCCcchHHHHHHhccccCCC--------ceeeeecccccceEEEecCC--CCccHHHHHHHHHHHHHCCCCEEE
Confidence 67789999999999999999854332 24899999999999999876 5 7899999999999999999999
Q ss_pred eCcCCCCCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC--------------CCCC----CCCCEEEEeeecCC
Q 045717 277 LSIGLGPYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPF--------------SVVN----DAPWMLTVGASTTD 338 (374)
Q Consensus 277 ~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~--------------~~p~----~~~~vitVgA~~~~ 338 (374)
||||+... ...+ ..++.+|.++|+++|+||||+|.+.. .||+ ..++||+|||++.+
T Consensus 441 mSlG~~~~--s~~l----~~AV~~A~~kGILVVAAAGN~g~~~~s~p~~~~~d~~~~~~YPaa~s~~~~nVIaVGAv~~d 514 (639)
T PTZ00262 441 GSFSFDEY--SGIF----NESVKYLEEKGILFVVSASNCSHTKESKPDIPKCDLDVNKVYPPILSKKLRNVITVSNLIKD 514 (639)
T ss_pred eccccCCc--cHHH----HHHHHHHHHCCCEEEEeCCCCCCCcccccccccccccccccCChhhhccCCCEEEEeeccCC
Confidence 99997653 3334 44455899999999999999986421 2453 46899999999774
Q ss_pred Cc----eeeeeEeC-CCceEEeeeccccCCCCCCccccccC
Q 045717 339 RS----IVTSVQLG-NQETYDGESLLQWTDIPSEQLPLVYP 374 (374)
Q Consensus 339 ~~----~~~~s~~G-~~~~~~g~~~~~~~~~~~~~~~~~~~ 374 (374)
.. .+.+|+|| ..++|..++....++.++..|....|
T Consensus 515 ~~~~~s~s~~Snyg~~~VDIaAPG~dI~St~p~g~Y~~~SG 555 (639)
T PTZ00262 515 KNNQYSLSPNSFYSAKYCQLAAPGTNIYSTFPKNSYRKLNG 555 (639)
T ss_pred CCCcccccccccCCCCcceEEeCCCCeeeccCCCceeecCC
Confidence 32 23567887 45777766665555555555654443
No 4
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins. SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem
Probab=100.00 E-value=7.7e-36 Score=275.39 Aligned_cols=171 Identities=26% Similarity=0.362 Sum_probs=139.4
Q ss_pred ccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhcc
Q 045717 135 WKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSST 214 (374)
Q Consensus 135 ~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGi 214 (374)
|..+++|+||+|+||||||+.+||+|.+.. ...+|... ....|..+||||||||
T Consensus 1 W~~g~tG~gv~VaviDsGv~~~hp~l~~~~-------------------------~~~~~~~~-~~~~d~~gHGT~VAGi 54 (255)
T cd07479 1 WQLGYTGAGVKVAVFDTGLAKDHPHFRNVK-------------------------ERTNWTNE-KTLDDGLGHGTFVAGV 54 (255)
T ss_pred CCCCCCCCCCEEEEEeCCCCCCCcchhccc-------------------------cccccCCC-CCCCCCCCcHHHHHHH
Confidence 889999999999999999999999997420 11122222 4456788999999999
Q ss_pred ccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHH
Q 045717 215 AAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANA 293 (374)
Q Consensus 215 iag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~ 293 (374)
|+|... .+.||||+|+|+.+|+++.. + ...++++++++|+++++++|||||||.... ....
T Consensus 55 Ia~~~~-----------~~~GvAp~a~l~~~~v~~~~--~~~~~~~~~~a~~~a~~~~~~Vin~S~G~~~~-----~~~~ 116 (255)
T cd07479 55 IASSRE-----------QCLGFAPDAEIYIFRVFTNN--QVSYTSWFLDAFNYAILTKIDVLNLSIGGPDF-----MDKP 116 (255)
T ss_pred HHccCC-----------CceeECCCCEEEEEEeecCC--CCchHHHHHHHHHhhhhcCCCEEEeeccCCCC-----CCcH
Confidence 998742 13799999999999999876 5 677889999999999999999999997542 1122
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCC--CCCCCCCCEEEEeeecCCCceeeeeEeCC
Q 045717 294 IAIAAFKAVKKGIFVSISAGNWGPKPF--SVVNDAPWMLTVGASTTDRSIVTSVQLGN 349 (374)
Q Consensus 294 ~~~~~~~a~~~Gi~vV~AAGN~g~~~~--~~p~~~~~vitVgA~~~~~~~~~~s~~G~ 349 (374)
+...+.++.++|++||+||||+|.... .+|+..++||+|||++.+++++.|||+|.
T Consensus 117 ~~~~~~~~~~~gi~vV~aaGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~ 174 (255)
T cd07479 117 FVDKVWELTANNIIMVSAIGNDGPLYGTLNNPADQMDVIGVGGIDFDDNIARFSSRGM 174 (255)
T ss_pred HHHHHHHHHHCCcEEEEEcCCCCCCcccccCcccCCCceEEeeeccCCccccccCCCC
Confidence 333444778999999999999997543 46899999999999999999999999985
No 5
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=100.00 E-value=2.3e-35 Score=273.68 Aligned_cols=183 Identities=21% Similarity=0.267 Sum_probs=148.6
Q ss_pred cccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhc
Q 045717 134 FWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSS 213 (374)
Q Consensus 134 ~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAG 213 (374)
+|..+++|+||+|||||+|+|.+||+|+++.+.+....| .......|..+|||||||
T Consensus 2 lw~~g~~g~gV~VaViDsGid~~hp~l~~~~~~~~~~~~-----------------------~~~~~~~~~~gHGT~VAg 58 (267)
T cd07476 2 LFAFGGGDPRITIAILDGPVDRTHPCFRGANLTPLFTYA-----------------------AAACQDGGASAHGTHVAS 58 (267)
T ss_pred ceeccCCCCCeEEEEeCCCcCCCChhhCCCccccccCcc-----------------------ccCCCCCCCCCcHHHHHH
Confidence 799999999999999999999999999875332211111 111445678899999999
Q ss_pred cccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHH
Q 045717 214 TAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANA 293 (374)
Q Consensus 214 iiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~ 293 (374)
+|+|+..+ .+.||||+|+|+.+|++.....+...++++++++|+++++++|||||||.... .......
T Consensus 59 ii~g~~~~----------~~~GvAp~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~--~~~~~~~ 126 (267)
T cd07476 59 LIFGQPCS----------SVEGIAPLCRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIINISGGRLTQ--TGEADPI 126 (267)
T ss_pred HHhcCCCC----------CceeECcCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEEecCCcCCC--CCCCCHH
Confidence 99987421 23799999999999999876222447889999999999999999999997542 2233455
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCCEEEEeeecCCCceeeeeEeCCCc
Q 045717 294 IAIAAFKAVKKGIFVSISAGNWGPKPFSVVNDAPWMLTVGASTTDRSIVTSVQLGNQE 351 (374)
Q Consensus 294 ~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~ 351 (374)
+..++.++.++|+++|+||||+|.....+|+..++||+|||++.++....||+||...
T Consensus 127 l~~a~~~a~~~gvlvv~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~~~~~~~s~~g~~~ 184 (267)
T cd07476 127 LANAVAMCQQNNVLIVAAAGNEGCACLHVPAALPSVLAVGAMDDDGLPLKFSNWGADY 184 (267)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCceEEEEeecCCCCeeeecCCCCCC
Confidence 6666678999999999999999988788899999999999999999999999999763
No 6
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=3.1e-35 Score=269.58 Aligned_cols=181 Identities=21% Similarity=0.246 Sum_probs=141.2
Q ss_pred CCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCC-------CCCCCCCCCCccchhc
Q 045717 141 GKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNK-------SEPPTDNEGHGTHTSS 213 (374)
Q Consensus 141 G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~d~~gHGThVAG 213 (374)
+++|+|||||||||++||+|+++-. ..++|... .....|..+|||||||
T Consensus 2 ~~~V~VaVIDsGvd~~hpdl~~~i~------------------------~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAg 57 (247)
T cd07491 2 LKRIKVALIDDGVDILDSDLQGKII------------------------GGKSFSPYEGDGNKVSPYYVSADGHGTAMAR 57 (247)
T ss_pred CCCCEEEEECCCcCCCchhhccccc------------------------cCCCCCCCCCCcccCCCCCCCCCCcHHHHHH
Confidence 6899999999999999999987511 11112111 1233578999999999
Q ss_pred cccccCCCCCCcccCCCcccccccccceEeeeecccCCCC-----CCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCCh
Q 045717 214 TAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNG-----TCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKE 288 (374)
Q Consensus 214 iiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~-----g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~ 288 (374)
|| .|+||+|+|+++|+++.... .+...++++||+||++++++|||||||........
T Consensus 58 iI------------------~gvap~a~i~~~kv~~~~~~~~~~~~~~~~~i~~Ai~~Ai~~gadIIn~S~g~~~~~~~~ 119 (247)
T cd07491 58 MI------------------CRICPSAKLYVIKLEDRPSPDSNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPEDND 119 (247)
T ss_pred HH------------------HHHCCCCeEEEEEecccCCCCCcccccCHHHHHHHHHHHHHCCCcEEEeeeecccccccc
Confidence 99 47899999999999987521 13567899999999999999999999976521111
Q ss_pred hhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC-CC--CCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeeccccCC
Q 045717 289 FHANAIAIAAFKAVKKGIFVSISAGNWGPKPF-SV--VNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLLQWTD 363 (374)
Q Consensus 289 ~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~--p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~~~~~ 363 (374)
.....+..++.+|.++|++||+||||+|.+.. .+ |+..++||+|||++.+++++.||++|..++|..++....+.
T Consensus 120 ~~~~~l~~ai~~A~~~GilvvaaAGN~g~~~~~~~~~pa~~~~Vi~VgA~~~~g~~~~~S~~g~~vd~~APG~~i~s~ 197 (247)
T cd07491 120 NDINELENAIKEALDRGILLFCSASDQGAFTGDTYPPPAARDRIFRIGAADEDGGADAPVGDEDRVDYILPGENVEAR 197 (247)
T ss_pred cchHHHHHHHHHHHhCCeEEEEecCCCCCcCCCcccCcccCCCeEEEEeeCCCCCCccccCCCCcceEEeCCCceecC
Confidence 22455666677999999999999999998765 33 57889999999999999999999999998887555544443
No 7
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin. Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. Howev
Probab=100.00 E-value=6.5e-34 Score=265.58 Aligned_cols=203 Identities=24% Similarity=0.268 Sum_probs=154.9
Q ss_pred ccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCC----CCCCCCCCCCCCc
Q 045717 133 GFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFL----NKSEPPTDNEGHG 208 (374)
Q Consensus 133 ~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~d~~gHG 208 (374)
++|..+++|+||+|+|||||||++||+|.++........+ ...+.+. +......|..+||
T Consensus 1 ~aw~~g~~G~gv~IaviDtGid~~Hp~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~gHG 64 (273)
T cd07485 1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDGDGYDPA----------------VNGYNFVPNVGDIDNDVSVGGGHG 64 (273)
T ss_pred CccccccCCCCcEEEEEeCCCCCCChhhccCCCCCCcccc----------------cCCcccccccCCcCCCCCCCCCCH
Confidence 3799999999999999999999999999976111000000 0001111 1114456788999
Q ss_pred cchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCC
Q 045717 209 THTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHK 287 (374)
Q Consensus 209 ThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~ 287 (374)
|||||||++...+.....|.. .+.|+||+++|+.+|+++.. . ....+++++|+|+++.+++|||||||... .
T Consensus 65 T~VAgiia~~~~~~~~~g~i~--~~~gvap~a~l~~~~v~~~~--~~~~~~~~~~ai~~a~~~g~~Vin~S~g~~~---~ 137 (273)
T cd07485 65 THVAGTIAAVNNNGGGVGGIA--GAGGVAPGVKIMSIQIFAGR--YYVGDDAVAAAIVYAADNGAVILQNSWGGTG---G 137 (273)
T ss_pred HHHHHHHHcccCCCcceeccc--cccccCCCCEEEEEEEECCC--CCccHHHHHHHHHHHHHcCCcEEEecCCCCC---c
Confidence 999999999764433222221 23579999999999999876 4 67888999999999999999999999865 1
Q ss_pred hhhHHHHHHHHHHHHhC-------CcEEEEecCCCCCCCCCCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeec
Q 045717 288 EFHANAIAIAAFKAVKK-------GIFVSISAGNWGPKPFSVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESL 358 (374)
Q Consensus 288 ~~~~~~~~~~~~~a~~~-------Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~ 358 (374)
..+...+..++.++.++ |+++|+||||++.....+|+..++||+|||++.++..+.||++|..+++..++.
T Consensus 138 ~~~~~~~~~a~~~~~~~~~~~~~~g~lvv~AaGN~g~~~~~~pa~~~~vi~V~a~~~~~~~~~~S~~g~~~~i~apG~ 215 (273)
T cd07485 138 GIYSPLLKDAFDYFIENAGGSPLDGGIVVFSAGNSYTDEHRFPAAYPGVIAVAALDTNDNKASFSNYGRWVDIAAPGV 215 (273)
T ss_pred cccCHHHHHHHHHHHHhcccccCCCeEEEEecCCCCCCCCCCcccCCCeEEEEeccCCCCcCccccCCCceEEEeCCC
Confidence 12223334444477776 999999999999988888999999999999999999999999999999887765
No 8
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=3.8e-34 Score=261.74 Aligned_cols=187 Identities=24% Similarity=0.322 Sum_probs=147.8
Q ss_pred cEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCCCCC
Q 045717 144 VIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFVNGA 223 (374)
Q Consensus 144 v~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~ 223 (374)
|+||||||||+.+||+|+++.+ ..+++.. ....|..+|||||||||++...+.
T Consensus 1 V~VavIDsGvd~~hp~l~~~~~------------------------~~~~~~~--~~~~~~~~HGT~vAgiia~~~~~~- 53 (239)
T cd05561 1 VRVGMIDTGIDTAHPALSAVVI------------------------ARLFFAG--PGAPAPSAHGTAVASLLAGAGAQR- 53 (239)
T ss_pred CEEEEEeCCCCCCCcccccCcc------------------------ccccCCC--CCCCCCCCCHHHHHHHHhCCCCCC-
Confidence 7899999999999999976521 1122222 245678999999999999975221
Q ss_pred CcccCCCcccccccccceEeeeecccCCCC--CCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHHHH
Q 045717 224 NILGQANGTAVGMAPLAHLAMYKACDDYNG--TCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAFKA 301 (374)
Q Consensus 224 ~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~--g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a 301 (374)
.|+||+|+|+.+|+++.... .++.++++++|+|+++++++|||||||... ...+ ..++.++
T Consensus 54 ----------~Gvap~a~i~~~~v~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S~g~~~---~~~l----~~ai~~a 116 (239)
T cd05561 54 ----------PGLLPGADLYGADVFGRAGGGEGASALALARALDWLAEQGVRVVNISLAGPP---NALL----AAAVAAA 116 (239)
T ss_pred ----------cccCCCCEEEEEEEecCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC---CHHH----HHHHHHH
Confidence 59999999999999986421 267788999999999999999999999755 3334 4445588
Q ss_pred HhCCcEEEEecCCCCCCC-CCCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeeccccCCCCCCccccccC
Q 045717 302 VKKGIFVSISAGNWGPKP-FSVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLLQWTDIPSEQLPLVYP 374 (374)
Q Consensus 302 ~~~Gi~vV~AAGN~g~~~-~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 374 (374)
.++|+++|+||||+|.+. ..+|+..++||+|||++.+++...||++|..++|..++....+..+...|...+|
T Consensus 117 ~~~gilvv~AaGN~g~~~~~~~Pa~~~~vi~V~a~~~~~~~~~~s~~g~~~di~ApG~~i~~~~~~~~~~~~sG 190 (239)
T cd05561 117 AARGMVLVAAAGNDGPAAPPLYPAAYPGVIAVTAVDARGRLYREANRGAHVDFAAPGVDVWVAAPGGGYRYVSG 190 (239)
T ss_pred HHCCCEEEEecCCCCCCCCccCcccCCCceEEEeecCCCCccccCCCCCcceEEccccceecccCCCCEEEeCC
Confidence 999999999999999764 4679999999999999999999999999999998866655555444555554443
No 9
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins. Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a cat
Probab=100.00 E-value=4.5e-34 Score=268.70 Aligned_cols=214 Identities=22% Similarity=0.272 Sum_probs=146.4
Q ss_pred CccEEEEeecccCCCCCCCCCCCCCCCCC-ccCCccccCCCCcCCceeeeeeeCCCC-----------------------
Q 045717 142 KGVIIGVVDSGIGPTHPSFGDKDMPPPPA-KWRGKCEFAGGAGCNNKIIGARNFLNK----------------------- 197 (374)
Q Consensus 142 ~gv~VaViDtGid~~Hpdf~~~~~~~~~~-~w~~~~~~~~~~~~~~~i~~~~~~~~~----------------------- 197 (374)
++|+|||||||||++||||+++.+..... ..++....+.+| .++ +.+|+|...
T Consensus 1 ~~V~VaviDtGid~~Hpdl~~~~~~n~~e~~~~~~d~d~ng~--~dd-~~g~~f~~~~~~~~~~~~~~~~~~~~~~g~~~ 77 (291)
T cd07483 1 KTVIVAVLDSGVDIDHEDLKGKLWINKKEIPGNGIDDDNNGY--IDD-VNGWNFLGQYDPRRIVGDDPYDLTEKGYGNND 77 (291)
T ss_pred CceEEEEEeCCCCCCChhhhhhhhcCCcccCCCCccCCCCCc--ccc-ccCeeccCCcccccccccCccccccccccccc
Confidence 58999999999999999998752211110 011111111111 011 234444321
Q ss_pred CCCCCCCCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEe
Q 045717 198 SEPPTDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSL 277 (374)
Q Consensus 198 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~ 277 (374)
...+.+..+|||||||||+|...++.+ +.||||+++|+++|++... ....+++++||+|+++++++||||
T Consensus 78 ~~~~~~~~gHGT~VAGiIaa~~~n~~g--------~~GvAp~a~i~~~k~~~~g--~~~~~~i~~Ai~~a~~~g~~IiN~ 147 (291)
T cd07483 78 VNGPISDADHGTHVAGIIAAVRDNGIG--------IDGVADNVKIMPLRIVPNG--DERDKDIANAIRYAVDNGAKVINM 147 (291)
T ss_pred cCCCCCCCCcHHHHHHHHhCcCCCCCc--------eEEECCCCEEEEEEEecCC--CcCHHHHHHHHHHHHHCCCcEEEe
Confidence 023345889999999999998644322 3899999999999998654 467889999999999999999999
Q ss_pred CcCCCCCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC---CCCC--------CCCCEEEEeeecCCCc---eee
Q 045717 278 SIGLGPYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPF---SVVN--------DAPWMLTVGASTTDRS---IVT 343 (374)
Q Consensus 278 S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~---~~p~--------~~~~vitVgA~~~~~~---~~~ 343 (374)
|||....... +.+..++.++.++|+++|+||||+|.+.. .+|+ ..+++|+|||++..+. ++.
T Consensus 148 S~G~~~~~~~----~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~p~~~~~~~~~~~~~vi~Vga~~~~~~~~~~~~ 223 (291)
T cd07483 148 SFGKSFSPNK----EWVDDAIKYAESKGVLIVHAAGNDGLDLDITPNFPNDYDKNGGEPANNFITVGASSKKYENNLVAN 223 (291)
T ss_pred CCCCCCCCcc----HHHHHHHHHHHhCCeEEEEeCCCCCCCCCcCcCCCCcccccCccccCCeeEEeeccccCCcccccc
Confidence 9997542112 33444555889999999999999997543 3343 3589999999988764 689
Q ss_pred eeEeCC-CceEEeeeccccCCCCCCccccc
Q 045717 344 SVQLGN-QETYDGESLLQWTDIPSEQLPLV 372 (374)
Q Consensus 344 ~s~~G~-~~~~~g~~~~~~~~~~~~~~~~~ 372 (374)
|||||. .+++..++....+..+...|...
T Consensus 224 ~Sn~G~~~vdi~APG~~i~s~~~~~~~~~~ 253 (291)
T cd07483 224 FSNYGKKNVDVFAPGERIYSTTPDNEYETD 253 (291)
T ss_pred cCCCCCCceEEEeCCCCeEeccCcCCeEee
Confidence 999998 56776555444444344455443
No 10
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=100.00 E-value=8.6e-34 Score=262.94 Aligned_cols=188 Identities=27% Similarity=0.382 Sum_probs=157.6
Q ss_pred CcccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccc
Q 045717 131 NSGFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTH 210 (374)
Q Consensus 131 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGTh 210 (374)
...+|..+ +|+||+|+|||+|++++||+|... ++...+++.+....+.|..+||||
T Consensus 18 ~~~~~~~~-~G~gv~I~viDsGi~~~h~~l~~~-----------------------~~~~~~~~~~~~~~~~d~~~HGT~ 73 (260)
T cd07484 18 APKAWDIT-GGSGVTVAVVDTGVDPTHPDLLKV-----------------------KFVLGYDFVDNDSDAMDDNGHGTH 73 (260)
T ss_pred hHHHHhhc-CCCCCEEEEEeCCCCCCCcccccC-----------------------CcccceeccCCCCCCCCCCCcHHH
Confidence 56689888 999999999999999999998532 233455666555667789999999
Q ss_pred hhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChh
Q 045717 211 TSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEF 289 (374)
Q Consensus 211 VAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~ 289 (374)
|||+|++...++. .+.|+||+|+|+.+|+++.. + +...+++++|+|+++++++|||||||.... ...
T Consensus 74 vagii~~~~~~~~--------~~~Giap~a~l~~~~v~~~~--~~~~~~~~~~ai~~a~~~~~~iin~S~g~~~~--~~~ 141 (260)
T cd07484 74 VAGIIAAATNNGT--------GVAGVAPKAKIMPVKVLDAN--GSGSLADIANGIRYAADKGAKVINLSLGGGLG--STA 141 (260)
T ss_pred HHHHHhCccCCCC--------ceEeECCCCEEEEEEEECCC--CCcCHHHHHHHHHHHHHCCCeEEEecCCCCCC--CHH
Confidence 9999998753322 23899999999999999876 4 678899999999999999999999998752 333
Q ss_pred hHHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeec
Q 045717 290 HANAIAIAAFKAVKKGIFVSISAGNWGPKPFSVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESL 358 (374)
Q Consensus 290 ~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~ 358 (374)
+..++..+.++|++||+||||+|.+...+|+..++||+||+++.+++...||++|+.+++...+.
T Consensus 142 ----~~~~~~~a~~~gilvV~aaGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~apG~ 206 (260)
T cd07484 142 ----LQEAINYAWNKGVVVVAAAGNEGVSSVSYPAAYPGAIAVAATDQDDKRASFSNYGKWVDVSAPGG 206 (260)
T ss_pred ----HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCeEEEEeeCCCCCcCCcCCCCCCceEEeCCC
Confidence 44444588899999999999999998999999999999999999999999999999988875543
No 11
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti
Probab=100.00 E-value=8.4e-34 Score=262.26 Aligned_cols=177 Identities=31% Similarity=0.423 Sum_probs=149.5
Q ss_pred cccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhc
Q 045717 134 FWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSS 213 (374)
Q Consensus 134 ~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAG 213 (374)
+|..+++|+||+|+|||+||+++||+|.++ +...+++... ....|..+|||||||
T Consensus 17 ~~~~~~~G~gv~VaViDsGi~~~h~~~~~~------------------------~~~~~~~~~~-~~~~d~~~HGT~vAg 71 (255)
T cd04077 17 YYYDSSTGSGVDVYVLDTGIRTTHVEFGGR------------------------AIWGADFVGG-DPDSDCNGHGTHVAG 71 (255)
T ss_pred eEecCCCCCCcEEEEEcCCCCCCChhhhCC------------------------eeeeeecCCC-CCCCCCCccHHHHHH
Confidence 677789999999999999999999999764 3334555544 336788999999999
Q ss_pred cccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHC-----CCcEEEeCcCCCCCCCC
Q 045717 214 TAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIED-----GVDVLSLSIGLGPYQHK 287 (374)
Q Consensus 214 iiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~-----~~~Vin~S~G~~~~~~~ 287 (374)
+|+++. .||||+|+|+.+|+++.. + ...++++.+++|++++ +++|||||||... .
T Consensus 72 iia~~~--------------~GvAp~a~i~~~~i~~~~--~~~~~~~~~~ai~~~~~~~~~~~~~~iin~S~g~~~---~ 132 (255)
T cd04077 72 TVGGKT--------------YGVAKKANLVAVKVLDCN--GSGTLSGIIAGLEWVANDATKRGKPAVANMSLGGGA---S 132 (255)
T ss_pred HHHccc--------------cCcCCCCeEEEEEEeCCC--CCcCHHHHHHHHHHHHhcccccCCCeEEEeCCCCCC---C
Confidence 999874 799999999999999876 4 6788999999999987 4899999999876 4
Q ss_pred hhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeec
Q 045717 288 EFHANAIAIAAFKAVKKGIFVSISAGNWGPKPF-SVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESL 358 (374)
Q Consensus 288 ~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~ 358 (374)
..+.+.+ .++.++|+++|+||||+|.+.+ .+|+..++||+|||++.++....||++|+.+++..++.
T Consensus 133 ~~~~~~~----~~~~~~g~liV~aaGN~g~~~~~~~pa~~~~vi~Vga~~~~~~~~~~S~~g~~~~i~apG~ 200 (255)
T cd04077 133 TALDAAV----AAAVNAGVVVVVAAGNSNQDACNYSPASAPEAITVGATDSDDARASFSNYGSCVDIFAPGV 200 (255)
T ss_pred HHHHHHH----HHHHHCCCEEEEeCCCCCCCCCCcCccCCCceEEEeccCCCCCccCcccCCCCCcEEeCCC
Confidence 4444444 4888899999999999998764 66899999999999999999999999999988775543
No 12
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr
Probab=100.00 E-value=5.7e-33 Score=267.89 Aligned_cols=211 Identities=24% Similarity=0.325 Sum_probs=162.1
Q ss_pred cccCCC-CCCccEEEEeecccCCCCCCCCCCCCCCCCC-----ccCCccccCCCCcCCceeeeeeeCCCCCCCCC---CC
Q 045717 134 FWKDSN-FGKGVIIGVVDSGIGPTHPSFGDKDMPPPPA-----KWRGKCEFAGGAGCNNKIIGARNFLNKSEPPT---DN 204 (374)
Q Consensus 134 ~~~~~~-~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~-----~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---d~ 204 (374)
+|.+.. +|+||+|+||||||+++||+|.+........ .+...+..+...+++++++..++|.++..... +.
T Consensus 2 ~w~~~~~~G~gv~VaViDtGv~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (346)
T cd07475 2 LWDKGGYKGEGMVVAVIDSGVDPTHDAFRLDDDSKAKYSEEFEAKKKKAGIGYGKYYNEKVPFAYNYADNNDDILDEDDG 81 (346)
T ss_pred hhhhcCCCCCCcEEEEEeCCCCCCChhHccCCCcccccchhhhhhhhcccCCCCcccccCCCeeEcCCCCCCccCCCCCC
Confidence 688877 9999999999999999999999765443211 23333333444467788888999987765444 78
Q ss_pred CCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccC-CCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCC
Q 045717 205 EGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDD-YNGTCPESSVSAALDAAIEDGVDVLSLSIGLGP 283 (374)
Q Consensus 205 ~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~-~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~ 283 (374)
.+|||||||||+|...+.. ....+.||||+|+|+.+|+++. .........++.+++++++.+++|||||||...
T Consensus 82 ~~HGT~vagiiag~~~~~~-----~~~~~~GiAp~a~l~~~~v~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~ 156 (346)
T cd07475 82 SSHGMHVAGIVAGNGDEED-----NGEGIKGVAPEAQLLAMKVFSNPEGGSTYDDAYAKAIEDAVKLGADVINMSLGSTA 156 (346)
T ss_pred CCcHHHHHHHHhcCCCccc-----cCCceEEeCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCC
Confidence 9999999999999864321 1234589999999999999974 211377888999999999999999999999876
Q ss_pred CCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC----------------CCCCCCCCEEEEeeec------CCCce
Q 045717 284 YQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPF----------------SVVNDAPWMLTVGAST------TDRSI 341 (374)
Q Consensus 284 ~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~----------------~~p~~~~~vitVgA~~------~~~~~ 341 (374)
. .......+..++.++.++|++||+||||+|.+.. ..|+..+++|+||+++ ..+..
T Consensus 157 ~--~~~~~~~~~~~~~~a~~~giliv~aAGN~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~Vga~~~~~~~~~~~~~ 234 (346)
T cd07475 157 G--FVDLDDPEQQAIKRAREAGVVVVVAAGNDGNSGSGTSKPLATNNPDTGTVGSPATADDVLTVASANKKVPNPNGGQM 234 (346)
T ss_pred C--CCCCCCHHHHHHHHHhhCCeEEEEeCCCCCccCccccCcccccCCCcceecCCccCCCceEEeecccccCCCCCCcc
Confidence 3 2133344555666889999999999999986543 2356789999999998 66677
Q ss_pred eeeeEeCCCc
Q 045717 342 VTSVQLGNQE 351 (374)
Q Consensus 342 ~~~s~~G~~~ 351 (374)
..||++|...
T Consensus 235 ~~~S~~G~~~ 244 (346)
T cd07475 235 SGFSSWGPTP 244 (346)
T ss_pred CCCcCCCCCc
Confidence 8899999764
No 13
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=4.4e-33 Score=261.58 Aligned_cols=201 Identities=19% Similarity=0.179 Sum_probs=145.2
Q ss_pred ccEEEEeecccCCCCCCCCCCCCCCCC------CccCCcccc----CCCCcCCceeeeeeeCCCCCCCCCCCCCCccchh
Q 045717 143 GVIIGVVDSGIGPTHPSFGDKDMPPPP------AKWRGKCEF----AGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTS 212 (374)
Q Consensus 143 gv~VaViDtGid~~Hpdf~~~~~~~~~------~~w~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVA 212 (374)
||+|+||||||+++||+|.++.+.... ...++.... ....+.+.... ...........+..+||||||
T Consensus 1 gV~VaviDtGi~~~Hp~l~~~~~~g~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~HGT~vA 78 (285)
T cd07496 1 GVVVAVLDTGVLFHHPDLAGVLLPGYDFISDPAIANDGDGRDSDPTDPGDWVTGDDV--PPGGFCGSGVSPSSWHGTHVA 78 (285)
T ss_pred CCEEEEecCCCCCCCcchhhccccCcccccCcccccCCCCCCCCCCCcccccccccc--cccccccCCCCCCCCCHHHHH
Confidence 799999999999999999976422100 000000000 00000000000 001111144567789999999
Q ss_pred ccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHH----------CCCcEEEeCcCCC
Q 045717 213 STAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIE----------DGVDVLSLSIGLG 282 (374)
Q Consensus 213 Giiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~----------~~~~Vin~S~G~~ 282 (374)
|||+|...++.. +.||||+|+|+.+|+++.. +.+.+++++|++|+.+ ++++|||||||..
T Consensus 79 giiaa~~~~~~~--------~~GvAp~a~i~~~~v~~~~--~~~~~~i~~a~~~a~~~~~~~~~~~~~~~~Iin~S~G~~ 148 (285)
T cd07496 79 GTIAAVTNNGVG--------VAGVAWGARILPVRVLGKC--GGTLSDIVDGMRWAAGLPVPGVPVNPNPAKVINLSLGGD 148 (285)
T ss_pred HHHhCcCCCCCC--------ceeecCCCeEEEEEEecCC--CCcHHHHHHHHHHHhccCcCCCcccCCCCeEEEeCCCCC
Confidence 999998643322 3799999999999999877 6688999999999983 5689999999986
Q ss_pred CCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeeccc
Q 045717 283 PYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKP-FSVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLLQ 360 (374)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~-~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~~ 360 (374)
... ...+..++.++.++|++||+||||++.+. ..+|+.++++|+|||++.+++++.||++|..+++..++...
T Consensus 149 ~~~-----~~~~~~ai~~a~~~GvivV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~vdi~apG~~i 222 (285)
T cd07496 149 GAC-----SATMQNAINDVRARGVLVVVAAGNEGSSASVDAPANCRGVIAVGATDLRGQRASYSNYGPAVDVSAPGGDC 222 (285)
T ss_pred CCC-----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCCCCCCceEEEeccCCCCCcccccCCCCCCCEEeCCCCc
Confidence 521 23444555588899999999999999876 67799999999999999999999999999999887555433
No 14
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=6.2e-33 Score=262.06 Aligned_cols=200 Identities=25% Similarity=0.231 Sum_probs=128.4
Q ss_pred CCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCC-CCCCCCCCCccchhccccccC
Q 045717 141 GKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKS-EPPTDNEGHGTHTSSTAAGTF 219 (374)
Q Consensus 141 G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~d~~gHGThVAGiiag~~ 219 (374)
|+||+|||||||||.+||||.++... .|... +....++...+++..+. ..+.|++||||||||||+|..
T Consensus 1 G~gV~VaViDTGid~~HPdl~~~~~~----~~~~~------~d~~~~~~~g~d~~~~~~~~~~D~~gHGThvAGiiag~~ 70 (311)
T cd07497 1 GEGVVIAIVDTGVDYSHPDLDIYGNF----SWKLK------FDYKAYLLPGMDKWGGFYVIMYDFFSHGTSCASVAAGRG 70 (311)
T ss_pred CCCeEEEEEeCCcCCCChhHhcccCC----Ccccc------cCcCCCccCCcCCCCCccCCCCCccccchhHHHHHhccC
Confidence 78999999999999999999764211 11000 00111223334444321 346789999999999999986
Q ss_pred CCCCCcccC-CCcccccccccceEeeeecccCCCCCCCHHHHHH-------HHHHHH--HCCCcEEEeCcCCCCCCCChh
Q 045717 220 VNGANILGQ-ANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSA-------ALDAAI--EDGVDVLSLSIGLGPYQHKEF 289 (374)
Q Consensus 220 ~~~~~~~g~-~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~-------ai~~a~--~~~~~Vin~S~G~~~~~~~~~ 289 (374)
.+..+..++ ....+.||||+|+|+++|++.... ......+.. +++|.. +++++|||||||.........
T Consensus 71 ~~~~~~~~~~~~~g~~GVAP~A~l~~vkvl~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~VIN~S~G~~~~~~~~~ 149 (311)
T cd07497 71 KMEYNLYGYTGKFLIRGIAPDAKIAAVKALWFGD-VIYAWLWTAGFDPVDRKLSWIYTGGPRVDVISNSWGISNFAYTGY 149 (311)
T ss_pred cccccccccccccceeeeCCCCEEEEEEEEecCC-cchhhhhhhccchhhhhhhhhhccCCCceEEEecCCcCCCCcccc
Confidence 432221111 112458999999999999997541 122222222 445543 578999999999754211000
Q ss_pred --hHHHHHHHHHH-HHhCCcEEEEecCCCCCCCC--CCCCCCCCEEEEeeecCC---------------CceeeeeEeCC
Q 045717 290 --HANAIAIAAFK-AVKKGIFVSISAGNWGPKPF--SVVNDAPWMLTVGASTTD---------------RSIVTSVQLGN 349 (374)
Q Consensus 290 --~~~~~~~~~~~-a~~~Gi~vV~AAGN~g~~~~--~~p~~~~~vitVgA~~~~---------------~~~~~~s~~G~ 349 (374)
-.+........ +.++|+++|+||||+|.+.+ .+|+.++++|+|||++.. ++.+.||++|.
T Consensus 150 ~~g~~~~~~~~d~~~~~~Gv~vV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~fSs~Gp 229 (311)
T cd07497 150 APGLDISSLVIDALVTYTGVPIVSAAGNGGPGYGTITAPGAASLAISVGAATNFDYRPFYLFGYLPGGSGDVVSWSSRGP 229 (311)
T ss_pred ccCcCHHHHHHHHHHhcCCCEEEEeCCCCCCCCccccCccCCCCeEEEEeccCCcccchhhhccccCCCCCccccccCCC
Confidence 00111111112 24899999999999998644 468999999999999753 45678999998
Q ss_pred Cc
Q 045717 350 QE 351 (374)
Q Consensus 350 ~~ 351 (374)
..
T Consensus 230 ~~ 231 (311)
T cd07497 230 SI 231 (311)
T ss_pred Cc
Confidence 63
No 15
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.6e-32 Score=251.74 Aligned_cols=183 Identities=28% Similarity=0.367 Sum_probs=149.1
Q ss_pred cEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCCCCC
Q 045717 144 VIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFVNGA 223 (374)
Q Consensus 144 v~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~ 223 (374)
|+|+|||+||+++||+|++. .++...+++.....+..|..+|||||||||+|+..+.
T Consensus 1 V~VaviDsGi~~~hp~l~~~----------------------~~~~~~~~~~~~~~~~~~~~~HGT~vAgiiag~~~~~- 57 (242)
T cd07498 1 VVVAIIDTGVDLNHPDLSGK----------------------PKLVPGWNFVSNNDPTSDIDGHGTACAGVAAAVGNNG- 57 (242)
T ss_pred CEEEEecCCCCCCChhhccC----------------------cCccCCccccCCCCCCCCCCCCHHHHHHHHHhccCCC-
Confidence 78999999999999999863 0122233444333456789999999999999985322
Q ss_pred CcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHHHHHh
Q 045717 224 NILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAFKAVK 303 (374)
Q Consensus 224 ~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~ 303 (374)
..+.||||+|+|+.+|+++... ....+++.++++|+.+++++|||||||.... .......+..+..++..
T Consensus 58 -------~~~~Gvap~a~i~~~~~~~~~~-~~~~~~~~~ai~~a~~~~~~Vin~S~g~~~~--~~~~~~~~~~~~~~~~~ 127 (242)
T cd07498 58 -------LGVAGVAPGAKLMPVRIADSLG-YAYWSDIAQAITWAADNGADVISNSWGGSDS--TESISSAIDNAATYGRN 127 (242)
T ss_pred -------ceeEeECCCCEEEEEEEECCCC-CccHHHHHHHHHHHHHCCCeEEEeccCCCCC--CchHHHHHHHHHHHHhh
Confidence 2248999999999999998762 2678899999999999999999999998663 33455666766778888
Q ss_pred -CCcEEEEecCCCCCCCCCCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeecc
Q 045717 304 -KGIFVSISAGNWGPKPFSVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLL 359 (374)
Q Consensus 304 -~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~ 359 (374)
+|++||+||||+|.....+|+..+++|+|||++.+++.+.||++|+.+++..++..
T Consensus 128 ~~gvliv~aaGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~apG~~ 184 (242)
T cd07498 128 GKGGVVLFAAGNSGRSVSSGYAANPSVIAVAATDSNDARASYSNYGNYVDLVAPGVG 184 (242)
T ss_pred cCCeEEEEecCCCCCccCCCCcCCCCeEEEEEeCCCCCccCcCCCCCCeEEEeCcCC
Confidence 99999999999999888889999999999999999999999999999888754433
No 16
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins. Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.
Probab=100.00 E-value=2e-32 Score=254.34 Aligned_cols=204 Identities=22% Similarity=0.265 Sum_probs=148.3
Q ss_pred CCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCC
Q 045717 141 GKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFV 220 (374)
Q Consensus 141 G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~ 220 (374)
|+||+|+|||+||+++||+|.++- .. .+...... ....++.......+.|..+|||||||+|+|...
T Consensus 1 G~GV~VaViDsGi~~~hp~l~~~~-~~---~~~~~~~~---------~~~~~d~~~~~~~~~d~~~HGT~vagii~g~~~ 67 (264)
T cd07481 1 GTGIVVANIDTGVDWTHPALKNKY-RG---WGGGSADH---------DYNWFDPVGNTPLPYDDNGHGTHTMGTMVGNDG 67 (264)
T ss_pred CCCcEEEEEeCCCCCCChhHhhcc-cc---cCCCCccc---------ccccccCCCCCCCCCCCCCchhhhhhheeecCC
Confidence 799999999999999999998641 00 00000000 000111222225567889999999999998742
Q ss_pred CCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHH------------CCCcEEEeCcCCCCCCCCh
Q 045717 221 NGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIE------------DGVDVLSLSIGLGPYQHKE 288 (374)
Q Consensus 221 ~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~------------~~~~Vin~S~G~~~~~~~~ 288 (374)
++ ...||||+|+|+.+|+++.. ++..++++++++|++. .+++|||||||....
T Consensus 68 ~~---------~~~GvAp~a~i~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~Iin~S~G~~~~---- 132 (264)
T cd07481 68 DG---------QQIGVAPGARWIACRALDRN--GGNDADYLRCAQWMLAPTDSAGNPADPDLAPDVINNSWGGPSG---- 132 (264)
T ss_pred CC---------CceEECCCCeEEEEEeecCC--CCcHHHHHHHHHHHHhcccccccccccccCCeEEEeCCCcCCC----
Confidence 21 12799999999999999877 6788899999999875 678999999998652
Q ss_pred hhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC---CCCCCCCCEEEEeeecCCCceeeeeEeCCCc------eEEeeecc
Q 045717 289 FHANAIAIAAFKAVKKGIFVSISAGNWGPKPF---SVVNDAPWMLTVGASTTDRSIVTSVQLGNQE------TYDGESLL 359 (374)
Q Consensus 289 ~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~---~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~------~~~g~~~~ 359 (374)
....+..++..+.++|++||+||||++.+.. .+|+.++++|+|||++.++..+.||++|... +|..++..
T Consensus 133 -~~~~~~~~~~~~~~~gvlvV~aaGN~~~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~S~~g~~~~~~~~~dv~ApG~~ 211 (264)
T cd07481 133 -DNEWLQPAVAAWRAAGIFPVFAAGNDGPRCSTLNAPPANYPESFAVGATDRNDVLADFSSRGPSTYGRIKPDISAPGVN 211 (264)
T ss_pred -CchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCcCCCCcCCceEEEEecCCCCCCccccCCCCCCCCCcCceEEECCCC
Confidence 1233344445788999999999999997654 3689999999999999999999999999887 77655544
Q ss_pred ccCCCCCCcccccc
Q 045717 360 QWTDIPSEQLPLVY 373 (374)
Q Consensus 360 ~~~~~~~~~~~~~~ 373 (374)
..+..++..|....
T Consensus 212 i~s~~~~~~~~~~~ 225 (264)
T cd07481 212 IRSAVPGGGYGSSS 225 (264)
T ss_pred eEEecCCCceEeeC
Confidence 44443344444433
No 17
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thoug
Probab=100.00 E-value=3.2e-32 Score=247.56 Aligned_cols=179 Identities=29% Similarity=0.386 Sum_probs=145.8
Q ss_pred ccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCC-CCCCCCCCCccchhccccccCCC
Q 045717 143 GVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKS-EPPTDNEGHGTHTSSTAAGTFVN 221 (374)
Q Consensus 143 gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~d~~gHGThVAGiiag~~~~ 221 (374)
||+|+|||+||+++||+|.++ +...++|.... ....|..+|||||||+|++....
T Consensus 1 gv~V~iiDsGv~~~h~~l~~~------------------------~~~~~~~~~~~~~~~~~~~~HGT~vA~ii~~~~~~ 56 (229)
T cd07477 1 GVKVAVIDTGIDSSHPDLKLN------------------------IVGGANFTGDDNNDYQDGNGHGTHVAGIIAALDNG 56 (229)
T ss_pred CCEEEEEcCCCCCCChhHhcc------------------------ccCcccccCCCCCCCCCCCCCHHHHHHHHhcccCC
Confidence 799999999999999999764 22233444332 45677899999999999997532
Q ss_pred CCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHHH
Q 045717 222 GANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAFK 300 (374)
Q Consensus 222 ~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~ 300 (374)
. .+.|+||+|+|+.+|+++.. + ...++++.+++|+++++++|||||||.... ...+.+ ++..
T Consensus 57 ~---------~~~giap~a~i~~~~~~~~~--~~~~~~~l~~ai~~a~~~~~~Vin~S~g~~~~--~~~~~~----~~~~ 119 (229)
T cd07477 57 V---------GVVGVAPEADLYAVKVLNDD--GSGTYSDIIAGIEWAIENGMDIINMSLGGPSD--SPALRE----AIKK 119 (229)
T ss_pred C---------ccEeeCCCCEEEEEEEECCC--CCcCHHHHHHHHHHHHHCCCCEEEECCccCCC--CHHHHH----HHHH
Confidence 1 24899999999999999876 5 677899999999999999999999998653 333334 4448
Q ss_pred HHhCCcEEEEecCCCCCCCCCC--CCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeeccccC
Q 045717 301 AVKKGIFVSISAGNWGPKPFSV--VNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLLQWT 362 (374)
Q Consensus 301 a~~~Gi~vV~AAGN~g~~~~~~--p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~~~~ 362 (374)
+.++|+++|+||||++.+.+.. |+..++||+||+++.+++...||++|..+++...+....+
T Consensus 120 a~~~giliv~aaGN~~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~apg~~i~~ 183 (229)
T cd07477 120 AYAAGILVVAAAGNSGNGDSSYDYPAKYPSVIAVGAVDSNNNRASFSSTGPEVELAAPGVDILS 183 (229)
T ss_pred HHHCCCEEEEecCCCCCCCCCccCCCCCCCEEEEEeecCCCCcCCccCCCCCceEEeCCCCeEE
Confidence 8899999999999999887765 9999999999999999999999999999888755544433
No 18
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.98 E-value=8.8e-32 Score=249.61 Aligned_cols=182 Identities=31% Similarity=0.398 Sum_probs=143.2
Q ss_pred ccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCC-CCCCCCccchhccccccCCC
Q 045717 143 GVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPP-TDNEGHGTHTSSTAAGTFVN 221 (374)
Q Consensus 143 gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~d~~gHGThVAGiiag~~~~ 221 (374)
||+||||||||+++||+|....+ ..+.++.+.++|.++.... .|..+|||||||+|+|...
T Consensus 1 Gv~VaviDsGi~~~h~~~~~~~~-----------------~~~~~i~~~~~~~~~~~~~~~~~~~HGT~vagiia~~~~- 62 (261)
T cd07493 1 GITIAVIDAGFPKVHEAFAFKHL-----------------FKNLRILGEYDFVDNSNNTNYTDDDHGTAVLSTMAGYTP- 62 (261)
T ss_pred CCEEEEEccCCCccCcchhhhcc-----------------ccCCceeeeecCccCCCCCCCCCCCchhhhheeeeeCCC-
Confidence 79999999999999999942100 0234577788888765555 7889999999999998742
Q ss_pred CCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCC---------hhhH
Q 045717 222 GANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHK---------EFHA 291 (374)
Q Consensus 222 ~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~---------~~~~ 291 (374)
+.+.||||+|+|+.+|+.+..... ....+++.+++|+.+++++|||||||....... ....
T Consensus 63 ---------~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~~~ai~~a~~~~v~VIn~S~G~~~~~~~~~~~~~~~~~~~~ 133 (261)
T cd07493 63 ---------GVMVGTAPNASYYLARTEDVASETPVEEDNWVAAAEWADSLGVDIISSSLGYTTFDNPTYSYTYADMDGKT 133 (261)
T ss_pred ---------CCEEEeCCCCEEEEEEecccCCcccccHHHHHHHHHHHHHcCCCEEEeCCCcCCCCCcccccccccccccc
Confidence 224899999999999987654112 456678999999999999999999997652111 0012
Q ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCCC---CCCCCCCCCEEEEeeecCCCceeeeeEeCCCc
Q 045717 292 NAIAIAAFKAVKKGIFVSISAGNWGPKP---FSVVNDAPWMLTVGASTTDRSIVTSVQLGNQE 351 (374)
Q Consensus 292 ~~~~~~~~~a~~~Gi~vV~AAGN~g~~~---~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~ 351 (374)
..+..++.++.++|+++|+||||+|.+. ..+|+..++||+|||++.++.++.||++|+..
T Consensus 134 ~~l~~a~~~a~~~gilvv~AAGN~g~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~ 196 (261)
T cd07493 134 SFISRAANIAASKGMLVVNSAGNEGSTQWKGIGAPADAENVLSVGAVDANGNKASFSSIGPTA 196 (261)
T ss_pred hHHHHHHHHHHhCCeEEEEECCCCCCCCCCcccCcccCCceEEEEEeccCCCCCccCCcCCCC
Confidence 3455666688999999999999999873 46789999999999999999999999999863
No 19
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=2.9e-31 Score=245.10 Aligned_cols=167 Identities=30% Similarity=0.372 Sum_probs=133.3
Q ss_pred ccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCC----CCCCCCCCCCCCccchhcccccc
Q 045717 143 GVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFL----NKSEPPTDNEGHGTHTSSTAAGT 218 (374)
Q Consensus 143 gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~d~~gHGThVAGiiag~ 218 (374)
||+|+|||+||+++||+|.++.. ...+|. .......|..+|||||||+|+|+
T Consensus 1 GV~VaviDsGv~~~hp~l~~~~~------------------------~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~ 56 (254)
T cd07490 1 GVTVAVLDTGVDADHPDLAGRVA------------------------QWADFDENRRISATEVFDAGGHGTHVSGTIGGG 56 (254)
T ss_pred CCEEEEEeCCCCCCCcchhcccC------------------------CceeccCCCCCCCCCCCCCCCcHHHHHHHHhcC
Confidence 79999999999999999976411 111121 11245667889999999999998
Q ss_pred CCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHH
Q 045717 219 FVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAA 298 (374)
Q Consensus 219 ~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~ 298 (374)
.. ++.+.||||+++|+.+|+++.. ++..++++++++|+++++++|||||||..... ...+....
T Consensus 57 ~~---------~~~~~GvAp~a~i~~~~v~~~~--~~~~~~~~~ai~~a~~~~~~Vin~S~g~~~~~-----~~~~~~~~ 120 (254)
T cd07490 57 GA---------KGVYIGVAPEADLLHGKVLDDG--GGSLSQIIAGMEWAVEKDADVVSMSLGGTYYS-----EDPLEEAV 120 (254)
T ss_pred CC---------CCCEEEECCCCEEEEEEEecCC--CCcHHHHHHHHHHHHhCCCCEEEECCCcCCCC-----CcHHHHHH
Confidence 53 2224799999999999999877 57889999999999999999999999987631 12222222
Q ss_pred HHHHh-CCcEEEEecCCCCCCCCCCCCCCCCEEEEeeecCCCceeeeeEeCC
Q 045717 299 FKAVK-KGIFVSISAGNWGPKPFSVVNDAPWMLTVGASTTDRSIVTSVQLGN 349 (374)
Q Consensus 299 ~~a~~-~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~~~~~~~~s~~G~ 349 (374)
....+ +|++||+||||+|.....+|+..+++|+|||++.+++...|+++|+
T Consensus 121 ~~~~~~~g~lvV~aAGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~~g~ 172 (254)
T cd07490 121 EALSNQTGALFVVSAGNEGHGTSGSPGSAYAALSVGAVDRDDEDAWFSSFGS 172 (254)
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCCCccCCceeEEecccccCCccCccCCcc
Confidence 23333 6999999999999988888999999999999999999999999983
No 20
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family. Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi
Probab=99.97 E-value=2.4e-31 Score=247.51 Aligned_cols=162 Identities=25% Similarity=0.242 Sum_probs=120.3
Q ss_pred CCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccc
Q 045717 138 SNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAG 217 (374)
Q Consensus 138 ~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag 217 (374)
+++|+||+|+|||||||.+||++.+..-+..+.. .++........|..+|||||||||
T Consensus 1 g~tG~gv~vaviDtGvd~~~~~~~~~~~~~l~~~--------------------~~~~~~~~~~~d~~gHGT~vAgii-- 58 (275)
T cd05562 1 GVDGTGIKIGVISDGFDGLGDAADDQASGDLPGN--------------------VNVLGDLDGGSGGGDEGRAMLEII-- 58 (275)
T ss_pred CCCCCceEEEEEeCCccccccccccccCCCCCcc--------------------eeeccccCCCCCCCchHHHHHHHH--
Confidence 4789999999999999998885432211111111 111111144568899999999999
Q ss_pred cCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHH
Q 045717 218 TFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIA 297 (374)
Q Consensus 218 ~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~ 297 (374)
.||||+|+|+.+|+. ...++++++|+|+++++++|||||||.... .......+..+
T Consensus 59 ----------------~GvAP~a~l~~~~~~------~~~~~i~~ai~~a~~~g~~Vin~S~g~~~~--~~~~~~~~~~a 114 (275)
T cd05562 59 ----------------HDIAPGAELAFHTAG------GGELDFAAAIRALAAAGADIIVDDIGYLNE--PFFQDGPIAQA 114 (275)
T ss_pred ----------------hccCCCCEEEEEecC------CCHHHHHHHHHHHHHcCCCEEEecccccCC--CcccCCHHHHH
Confidence 589999999998763 347889999999999999999999998652 11112234455
Q ss_pred HHHHHhC-CcEEEEecCCCCCCCC-CCCCCCCCEEEEeeecCCCceeeee
Q 045717 298 AFKAVKK-GIFVSISAGNWGPKPF-SVVNDAPWMLTVGASTTDRSIVTSV 345 (374)
Q Consensus 298 ~~~a~~~-Gi~vV~AAGN~g~~~~-~~p~~~~~vitVgA~~~~~~~~~~s 345 (374)
+.++.++ |++||+||||+|.... .+|+.+++||+|||++.++.+..||
T Consensus 115 i~~a~~~~GvlvVaAAGN~g~~~~~~~Pa~~~~vitVgA~~~~~~~~~~s 164 (275)
T cd05562 115 VDEVVASPGVLYFSSAGNDGQSGSIFGHAAAPGAIAVGAVDYGNTPAFGS 164 (275)
T ss_pred HHHHHHcCCcEEEEeCCCCCCCCCccCCCCCCCeEEEEeeccCCCccccc
Confidence 5577776 9999999999998654 4589999999999999988776443
No 21
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=2.5e-31 Score=246.77 Aligned_cols=175 Identities=33% Similarity=0.528 Sum_probs=141.8
Q ss_pred CCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCC---CCCCCCCCCCCccchhccccc
Q 045717 141 GKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLN---KSEPPTDNEGHGTHTSSTAAG 217 (374)
Q Consensus 141 G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~d~~gHGThVAGiiag 217 (374)
|+||+|+|||+|++++||+|.++... .+.+.. ......|..+|||||||+|+|
T Consensus 1 G~gv~VaviDsGv~~~h~~l~~~~~~------------------------~~~~~~~~~~~~~~~d~~~HGT~vAgiiag 56 (264)
T cd07487 1 GKGITVAVLDTGIDAPHPDFDGRIIR------------------------FADFVNTVNGRTTPYDDNGHGTHVAGIIAG 56 (264)
T ss_pred CCCcEEEEEeCCCCCCCccccccccc------------------------cccccccccCCCCCCCCCCchHHHHHHHhc
Confidence 79999999999999999999865211 111111 225667788999999999999
Q ss_pred cCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHC----CCcEEEeCcCCCCCCCChhhHH
Q 045717 218 TFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIED----GVDVLSLSIGLGPYQHKEFHAN 292 (374)
Q Consensus 218 ~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~----~~~Vin~S~G~~~~~~~~~~~~ 292 (374)
...++ .+.+.||||+|+|+.+|+++.. + ...++++++++|++++ +++|||||||.... ......
T Consensus 57 ~~~~~-------~~~~~Giap~a~i~~~~v~~~~--~~~~~~~~~~ai~~~~~~~~~~~~~Iin~S~g~~~~--~~~~~~ 125 (264)
T cd07487 57 SGRAS-------NGKYKGVAPGANLVGVKVLDDS--GSGSESDIIAGIDWVVENNEKYNIRVVNLSLGAPPD--PSYGED 125 (264)
T ss_pred CCccc-------CCceEEECCCCeEEEEEeecCC--CCccHHHHHHHHHHHHhhccccCceEEEeccCCCCC--CCCCCC
Confidence 86432 2334899999999999999877 5 6788999999999998 99999999998763 123344
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCCCC--CCCCCCCCEEEEeeecCCCc----eeeeeEeCCC
Q 045717 293 AIAIAAFKAVKKGIFVSISAGNWGPKPF--SVVNDAPWMLTVGASTTDRS----IVTSVQLGNQ 350 (374)
Q Consensus 293 ~~~~~~~~a~~~Gi~vV~AAGN~g~~~~--~~p~~~~~vitVgA~~~~~~----~~~~s~~G~~ 350 (374)
.+..++.++.++|++||+||||++.... .+|+..+++|+|||++.++. .+.||++|..
T Consensus 126 ~~~~~~~~~~~~gilvv~aaGN~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~~~~~s~~G~~ 189 (264)
T cd07487 126 PLCQAVERLWDAGIVVVVAAGNSGPGPGTITSPGNSPKVITVGAVDDNGPHDDGISYFSSRGPT 189 (264)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCCCccCCcccCCCceEEEeccCCCCCCccccccccCCCC
Confidence 5555666888999999999999998776 66899999999999999988 7899999964
No 22
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5. gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=2.5e-31 Score=252.80 Aligned_cols=183 Identities=30% Similarity=0.392 Sum_probs=142.1
Q ss_pred CcccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCC----------CCCCC
Q 045717 131 NSGFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFL----------NKSEP 200 (374)
Q Consensus 131 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~ 200 (374)
++.+|..+++|+||+|+|||+||+++||+|.++-.+. .++.+.+++. .....
T Consensus 2 v~~~~~~g~tG~gv~VaViDsGid~~hp~l~~~~~~~------------------~~~~~~~d~~~~~~~~~~~~~~~~~ 63 (312)
T cd07489 2 VDKLHAEGITGKGVKVAVVDTGIDYTHPALGGCFGPG------------------CKVAGGYDFVGDDYDGTNPPVPDDD 63 (312)
T ss_pred hhhHHhCCCCCCCCEEEEEECCCCCCChhhhcCCCCC------------------ceeccccccCCcccccccCCCCCCC
Confidence 3568999999999999999999999999998753221 1111222222 11145
Q ss_pred CCCCCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCc
Q 045717 201 PTDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSI 279 (374)
Q Consensus 201 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~ 279 (374)
+.|..+|||||||+|+++..+ ..+.||||+|+|+.+|+++.. + .....++++++|+++++++||||||
T Consensus 64 ~~d~~gHGT~vAgiia~~~~~---------~~~~GiAp~a~i~~~~v~~~~--~~~~~~~~~~ai~~a~~~~~~iIn~S~ 132 (312)
T cd07489 64 PMDCQGHGTHVAGIIAANPNA---------YGFTGVAPEATLGAYRVFGCS--GSTTEDTIIAAFLRAYEDGADVITASL 132 (312)
T ss_pred CCCCCCcHHHHHHHHhcCCCC---------CceEEECCCCEEEEEEeecCC--CCCCHHHHHHHHHHHHhcCCCEEEeCC
Confidence 667799999999999998633 224899999999999999865 5 6777899999999999999999999
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC---CCCCCCCCEEEEeeecCCCceeeeeEeCCCc
Q 045717 280 GLGPYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPF---SVVNDAPWMLTVGASTTDRSIVTSVQLGNQE 351 (374)
Q Consensus 280 G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~---~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~ 351 (374)
|..... ....+...+.++.++|+++|+||||+|.... .+|+..+++|+|||++ +.||++|+..
T Consensus 133 g~~~~~----~~~~~~~~~~~~~~~gv~iv~aaGN~g~~~~~~~~~p~~~~~vi~Vga~~-----~~~s~~g~~~ 198 (312)
T cd07489 133 GGPSGW----SEDPWAVVASRIVDAGVVVTIAAGNDGERGPFYASSPASGRGVIAVASVD-----SYFSSWGPTN 198 (312)
T ss_pred CcCCCC----CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccCCccCCCeEEEEEec-----CCccCCCCCC
Confidence 976521 1244445556888899999999999997643 4478899999999988 6788888765
No 23
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=2.8e-30 Score=239.16 Aligned_cols=196 Identities=24% Similarity=0.323 Sum_probs=145.5
Q ss_pred CccEEEEeecccCCCCCCCCCCCCCCC-CCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCC
Q 045717 142 KGVIIGVVDSGIGPTHPSFGDKDMPPP-PAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFV 220 (374)
Q Consensus 142 ~gv~VaViDtGid~~Hpdf~~~~~~~~-~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~ 220 (374)
+||+|+|||||||++||+|.++..... ...+.+....+..+ .+ ....++|.....++.|..+|||||||+|+|...
T Consensus 2 ~~v~V~iiDtGid~~h~~l~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~d~~~HGT~va~ii~~~~~ 78 (259)
T cd07473 2 GDVVVAVIDTGVDYNHPDLKDNMWVNPGEIPGNGIDDDGNGY--VD-DIYGWNFVNNDNDPMDDNGHGTHVAGIIGAVGN 78 (259)
T ss_pred CCCEEEEEeCCCCCCChhhccccccCcccccccCcccCCCCc--cc-CCCcccccCCCCCCCCCCCcHHHHHHHHHCcCC
Confidence 689999999999999999997632111 11111111111111 01 112344444446678899999999999999854
Q ss_pred CCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHH
Q 045717 221 NGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAF 299 (374)
Q Consensus 221 ~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~ 299 (374)
++. .+.|+||+|+|+.+|+++.. + +...+++++++|+++.+++|||+|||.... . ..+..++.
T Consensus 79 ~~~--------~~~GvAp~a~l~~~~~~~~~--~~~~~~~~~~a~~~a~~~~~~vin~S~G~~~~--~----~~~~~~~~ 142 (259)
T cd07473 79 NGI--------GIAGVAWNVKIMPLKFLGAD--GSGTTSDAIKAIDYAVDMGAKIINNSWGGGGP--S----QALRDAIA 142 (259)
T ss_pred CCC--------ceEEeCCCCEEEEEEEeCCC--CCcCHHHHHHHHHHHHHCCCeEEEeCCCCCCC--C----HHHHHHHH
Confidence 322 24899999999999999877 5 788899999999999999999999998763 2 34444455
Q ss_pred HHHhCCcEEEEecCCCCCC---CCCCCC--CCCCEEEEeeecCCCceeeeeEeCCC-ceEEee
Q 045717 300 KAVKKGIFVSISAGNWGPK---PFSVVN--DAPWMLTVGASTTDRSIVTSVQLGNQ-ETYDGE 356 (374)
Q Consensus 300 ~a~~~Gi~vV~AAGN~g~~---~~~~p~--~~~~vitVgA~~~~~~~~~~s~~G~~-~~~~g~ 356 (374)
++.++|+++|+||||+|.. ...+|+ ..+++|+||+++.++....||++|.. .++..+
T Consensus 143 ~~~~~g~ivV~aaGN~g~~~~~~~~~p~~~~~~~vi~Vga~~~~~~~~~~s~~g~~~~~~~ap 205 (259)
T cd07473 143 RAIDAGILFVAAAGNDGTNNDKTPTYPASYDLDNIISVAATDSNDALASFSNYGKKTVDLAAP 205 (259)
T ss_pred HHHhCCCEEEEeCCCCCCCCCCCcCcCcccCCCCeEEEEecCCCCCcCcccCCCCCCcEEEec
Confidence 8889999999999999976 345664 45899999999999999999999974 555533
No 24
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases. Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases
Probab=99.97 E-value=4.6e-30 Score=241.92 Aligned_cols=191 Identities=25% Similarity=0.266 Sum_probs=141.5
Q ss_pred CCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhcccc
Q 045717 137 DSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAA 216 (374)
Q Consensus 137 ~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiia 216 (374)
.+++|+||+|+||||||+++||+|.+... .+.. ....++.....+.. ...|..+|||||||+|+
T Consensus 2 ~g~tG~gv~VaviDtGi~~~hp~l~~~~~------------~~~~-~~~~~~~~~~~~~~---~~~d~~~HGT~vAgiia 65 (293)
T cd04842 2 LGLTGKGQIVGVADTGLDTNHCFFYDPNF------------NKTN-LFHRKIVRYDSLSD---TKDDVDGHGTHVAGIIA 65 (293)
T ss_pred CCcCCcCCEEEEEecCCCCCCCcccCCCc------------CcCc-cCcccEEEeeccCC---CCCCCCCCcchhheeec
Confidence 57899999999999999999999976421 0000 12334444444443 23388999999999999
Q ss_pred ccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHH
Q 045717 217 GTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAI 296 (374)
Q Consensus 217 g~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~ 296 (374)
|...++.. ...+.||||+|+|+.+|+++.........++..+++++.+.+++|||||||.............+..
T Consensus 66 ~~~~~~~~-----~~~~~GvAp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~ 140 (293)
T cd04842 66 GKGNDSSS-----ISLYKGVAPKAKLYFQDIGDTSGNLSSPPDLNKLFSPMYDAGARISSNSWGSPVNNGYTLLARAYDQ 140 (293)
T ss_pred cCCcCCCc-----ccccccccccCeEEEEEeeccCccccCCccHHHHHHHHHHhCCEEEeccCCCCCccccchHHHHHHH
Confidence 98644321 1134899999999999998876211556778899999999999999999998763101222223321
Q ss_pred HHHHHHh-CCcEEEEecCCCCCCCC---CCCCCCCCEEEEeeecCCCc---------------eeeeeEeCCCc
Q 045717 297 AAFKAVK-KGIFVSISAGNWGPKPF---SVVNDAPWMLTVGASTTDRS---------------IVTSVQLGNQE 351 (374)
Q Consensus 297 ~~~~a~~-~Gi~vV~AAGN~g~~~~---~~p~~~~~vitVgA~~~~~~---------------~~~~s~~G~~~ 351 (374)
.+.+ +|+++|+||||+|.+.. ..|+..+++|+|||++.++. .+.||++|+..
T Consensus 141 ---~~~~~~g~lvV~aAGN~g~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~~~~~~~~~~~~~~~~S~~G~~~ 211 (293)
T cd04842 141 ---FAYNNPDILFVFSAGNDGNDGSNTIGSPATAKNVLTVGASNNPSVSNGEGGLGQSDNSDTVASFSSRGPTY 211 (293)
T ss_pred ---HHHhCCCeEEEEeCCCCCCCCCccccCcccccceEEEeeccCCCcccccccccccCCCCccccccCcCCCC
Confidence 2233 89999999999998876 67899999999999999888 88999999764
No 25
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=1.2e-30 Score=243.06 Aligned_cols=189 Identities=20% Similarity=0.153 Sum_probs=136.1
Q ss_pred CcccccCCC-CCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCcc
Q 045717 131 NSGFWKDSN-FGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGT 209 (374)
Q Consensus 131 ~~~~~~~~~-~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGT 209 (374)
+.++|+... .|++|+|+|||+|||.+||||+++.+.. ... ....|+++|||
T Consensus 4 ~~~aw~~~~g~G~gV~VaviDtGid~~Hpdl~~~~~~~---------------------------~~~-~~~~d~~gHGT 55 (277)
T cd04843 4 ARYAWTKPGGSGQGVTFVDIEQGWNLNHEDLVGNGITL---------------------------ISG-LTDQADSDHGT 55 (277)
T ss_pred hHHHHHhcCCCCCcEEEEEecCCCCCCChhhccccccc---------------------------cCC-CCCCCCCCCcc
Confidence 456888744 4899999999999999999998752110 000 12567899999
Q ss_pred chhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHH----CCCcEEEeCcCCCCCC
Q 045717 210 HTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIE----DGVDVLSLSIGLGPYQ 285 (374)
Q Consensus 210 hVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~----~~~~Vin~S~G~~~~~ 285 (374)
||||||+|.. ++ .+ +.||||+|+|+.+|+++ .++++++|.|+++ .++.+||||||.....
T Consensus 56 ~VAGiIaa~~-n~-------~G-~~GvAp~a~l~~i~v~~-------~~~~~~ai~~A~~~~~~~~v~~in~s~g~~~~~ 119 (277)
T cd04843 56 AVLGIIVAKD-NG-------IG-VTGIAHGAQAAVVSSTR-------VSNTADAILDAADYLSPGDVILLEMQTGGPNNG 119 (277)
T ss_pred hhheeeeeec-CC-------Cc-eeeeccCCEEEEEEecC-------CCCHHHHHHHHHhccCCCCEEEEEccccCCCcC
Confidence 9999999973 21 12 37999999999999986 2235566666666 3567889999986421
Q ss_pred CC---hhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC--CC----------C-CCCCCEEEEeeecCCC-c-eeeeeEe
Q 045717 286 HK---EFHANAIAIAAFKAVKKGIFVSISAGNWGPKPF--SV----------V-NDAPWMLTVGASTTDR-S-IVTSVQL 347 (374)
Q Consensus 286 ~~---~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~--~~----------p-~~~~~vitVgA~~~~~-~-~~~~s~~ 347 (374)
.. ......+..++.++.++|+++|+||||++.+.. .+ | ...+++|+|||++.++ . ++.||||
T Consensus 120 ~~~~p~~~~~~~~~av~~a~~~G~~vV~AAGN~~~~~~~~~~~~g~~~~~~~~~~~~~~vI~VgA~~~~~~~~~~~fSn~ 199 (277)
T cd04843 120 YPPLPVEYEQANFDAIRTATDLGIIVVEAAGNGGQDLDAPVYNRGPILNRFSPDFRDSGAIMVGAGSSTTGHTRLAFSNY 199 (277)
T ss_pred cccCcchhhHHHHHHHHHHHhCCcEEEEeCCCCCccccCcccccccccccCCcCcCCCCeEEEEeccCCCCCccccccCC
Confidence 11 123445556677889999999999999997632 11 1 2346899999999764 3 7899999
Q ss_pred CCCceEEeeeccccCC
Q 045717 348 GNQETYDGESLLQWTD 363 (374)
Q Consensus 348 G~~~~~~g~~~~~~~~ 363 (374)
|..+++.+++....++
T Consensus 200 G~~vdi~APG~~i~s~ 215 (277)
T cd04843 200 GSRVDVYGWGENVTTT 215 (277)
T ss_pred CCccceEcCCCCeEec
Confidence 9999988665444333
No 26
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=6e-30 Score=241.65 Aligned_cols=203 Identities=24% Similarity=0.330 Sum_probs=137.6
Q ss_pred CCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhcccc
Q 045717 137 DSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAA 216 (374)
Q Consensus 137 ~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiia 216 (374)
.+++|+||+|+|||+||+.+||+|.++.+ ...+|.+. ....|..+|||||||+|+
T Consensus 3 ~~~tG~gv~VaVlDsGv~~~hp~l~~~~~------------------------~~~~~~~~-~~~~d~~gHGT~VAgiia 57 (297)
T cd07480 3 SPFTGAGVRVAVLDTGIDLTHPAFAGRDI------------------------TTKSFVGG-EDVQDGHGHGTHCAGTIF 57 (297)
T ss_pred CCCCCCCCEEEEEcCCCCCCChhhcCCcc------------------------cCcccCCC-CCCCCCCCcHHHHHHHHh
Confidence 46899999999999999999999986521 22334433 345788999999999999
Q ss_pred ccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCC-------CChh
Q 045717 217 GTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQ-------HKEF 289 (374)
Q Consensus 217 g~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~-------~~~~ 289 (374)
|+..+ +...||||+|+|+.+|++.... ....++++++++|+++++++|||||||....+ ....
T Consensus 58 g~~~~---------~~~~GvAp~a~i~~~~~~~~~~-~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~ 127 (297)
T cd07480 58 GRDVP---------GPRYGVARGAEIALIGKVLGDG-GGGDGGILAGIQWAVANGADVISMSLGADFPGLVDQGWPPGLA 127 (297)
T ss_pred cccCC---------CcccccCCCCEEEEEEEEeCCC-CCcHHHHHHHHHHHHHcCCCEEEeccCCCCcccccccCCCCch
Confidence 87533 2236999999999999987661 36777899999999999999999999985410 0111
Q ss_pred hHHHHHHHHHHH---------------HhCCcEEEEecCCCCCCCCCC-----CCC---CCCEEEEeeecCCCceeeeeE
Q 045717 290 HANAIAIAAFKA---------------VKKGIFVSISAGNWGPKPFSV-----VND---APWMLTVGASTTDRSIVTSVQ 346 (374)
Q Consensus 290 ~~~~~~~~~~~a---------------~~~Gi~vV~AAGN~g~~~~~~-----p~~---~~~vitVgA~~~~~~~~~~s~ 346 (374)
....+......+ .++|++||+||||++...... |.. ...|++|++.+....+..+++
T Consensus 128 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~gvlvV~aAGN~g~~~~~~~~~~~~~~~~~~~~V~~V~~~~~~~~~~~~~~ 207 (297)
T cd07480 128 FSRALEAYRQRARLFDALMTLVAAQAALARGTLIVAAAGNESQRPAGIPPVGNPAACPSAMGVAAVGALGRTGNFSAVAN 207 (297)
T ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCceEEEecCCCCCCCCCCCCccCccccccccEEEEECCCCCCCCccccCC
Confidence 222222222233 789999999999998654332 232 344555555444444444444
Q ss_pred e-CCCceEEeeeccccCCCCCCccccccC
Q 045717 347 L-GNQETYDGESLLQWTDIPSEQLPLVYP 374 (374)
Q Consensus 347 ~-G~~~~~~g~~~~~~~~~~~~~~~~~~~ 374 (374)
+ +..+++.+++....+...+..|...+|
T Consensus 208 ~~~~~~dv~ApG~~i~s~~~~~~~~~~sG 236 (297)
T cd07480 208 FSNGEVDIAAPGVDIVSAAPGGGYRSMSG 236 (297)
T ss_pred CCCCceEEEeCCCCeEeecCCCcEEEeCc
Confidence 4 334677766655555555555554443
No 27
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II. Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing.
Probab=99.97 E-value=1.4e-29 Score=244.40 Aligned_cols=160 Identities=26% Similarity=0.284 Sum_probs=111.9
Q ss_pred CCCCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcC
Q 045717 202 TDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIG 280 (374)
Q Consensus 202 ~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G 280 (374)
.|+.+|||||||||+|...++ ..+.||||+|+|+++|+++...+. ....+++++++|+++.+++|||||||
T Consensus 182 ~d~~gHGThVAGIIAg~~~~~--------~~~~GVAP~A~I~svkv~d~~~gs~~t~~~l~~ai~~ai~~gadVIN~SlG 253 (412)
T cd04857 182 TDSGAHGTHVAGIAAAHFPEE--------PERNGVAPGAQIVSIKIGDTRLGSMETGTALVRAMIAAIETKCDLINMSYG 253 (412)
T ss_pred CCCCCCHHHHHHHHhCCCCCC--------CceEEecCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHcCCCEEEecCC
Confidence 467899999999999985332 234899999999999998764211 23357999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCCCC--CC-CCCCEEEEeeecC--------------CCceee
Q 045717 281 LGPYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPFSV--VN-DAPWMLTVGASTT--------------DRSIVT 343 (374)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~--p~-~~~~vitVgA~~~--------------~~~~~~ 343 (374)
.... .+......+.....+.++|+++|+||||+|...+++ |+ ..++||+|||+.. .+....
T Consensus 254 ~~~~--~~~~~~~~~~~~~~~~~~GVlvVaAAGN~G~~~~tv~~P~~~~~~VIsVGA~~~~~~~~~~y~~~~~~~~~~~~ 331 (412)
T cd04857 254 EATH--WPNSGRIIELMNEAVNKHGVIFVSSAGNNGPALSTVGAPGGTTSSVIGVGAYVSPEMMAAEYSLREKLPGNQYT 331 (412)
T ss_pred cCCC--CccchHHHHHHHHHHHhCCCEEEEECCCCCCCccccCCccccCCCeEEEcceeccCccccccccccccCCcccc
Confidence 8652 111111112222234578999999999999877754 64 5799999999753 234568
Q ss_pred eeEeCCC------ceEE--eeeccccCCCCCCcccc
Q 045717 344 SVQLGNQ------ETYD--GESLLQWTDIPSEQLPL 371 (374)
Q Consensus 344 ~s~~G~~------~~~~--g~~~~~~~~~~~~~~~~ 371 (374)
|||+|+. ++|. |..+...+.+....|.+
T Consensus 332 fSSrGP~~dG~~~pdI~APG~~I~s~p~~~~~~~~~ 367 (412)
T cd04857 332 WSSRGPTADGALGVSISAPGGAIASVPNWTLQGSQL 367 (412)
T ss_pred ccccCCcccCCcCceEEeCCCcEEEcccCCCCCeEE
Confidence 9999986 3454 44454444433333433
No 28
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases. Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family h
Probab=99.97 E-value=8.5e-30 Score=240.18 Aligned_cols=184 Identities=27% Similarity=0.283 Sum_probs=134.5
Q ss_pred ccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCCCC
Q 045717 143 GVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFVNG 222 (374)
Q Consensus 143 gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~ 222 (374)
.|+|+||||||+++||+|+++............ .+ ...............|..+|||||||+|+|...+
T Consensus 1 ~V~VaviDtGi~~~hp~l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~- 69 (294)
T cd07482 1 KVTVAVIDSGIDPDHPDLKNSISSYSKNLVPKG-----GY-----DGKEAGETGDINDIVDKLGHGTAVAGQIAANGNI- 69 (294)
T ss_pred CcEEEEEeCCCCCCChhHhhcccccccccccCC-----Cc-----CCccccccCCCCcCCCCCCcHhHHHHHHhcCCCC-
Confidence 489999999999999999864211100000000 00 0000000011134567899999999999987422
Q ss_pred CCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCC-----hhhHHHHHH
Q 045717 223 ANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHK-----EFHANAIAI 296 (374)
Q Consensus 223 ~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~-----~~~~~~~~~ 296 (374)
.||||+|+|+.+|+++.. + ...++++++|+|+++++++|||||||....... ......+..
T Consensus 70 -----------~GvAp~a~i~~~~v~~~~--~~~~~~~~~~ai~~a~~~~~~vin~S~G~~~~~~~~~~~~~~~~~~~~~ 136 (294)
T cd07482 70 -----------KGVAPGIGIVSYRVFGSC--GSAESSWIIKAIIDAADDGVDVINLSLGGYLIIGGEYEDDDVEYNAYKK 136 (294)
T ss_pred -----------ceeCCCCEEEEEEeecCC--CCcCHHHHHHHHHHHHHCCCCEEEeCCccCCCCCcccccchhhhHHHHH
Confidence 599999999999999877 5 488999999999999999999999997542111 222344555
Q ss_pred HHHHHHhCCcEEEEecCCCCCCC----------------------CCCCCCCCCEEEEeeecCCCceeeeeEeCCC
Q 045717 297 AAFKAVKKGIFVSISAGNWGPKP----------------------FSVVNDAPWMLTVGASTTDRSIVTSVQLGNQ 350 (374)
Q Consensus 297 ~~~~a~~~Gi~vV~AAGN~g~~~----------------------~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~ 350 (374)
++.++.++|++||+||||+|.+. ..+|+..+++|+|||++.++..+.||++|..
T Consensus 137 ~i~~a~~~g~lvv~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~S~~g~~ 212 (294)
T cd07482 137 AINYAKSKGSIVVAAAGNDGLDVSNKQELLDFLSSGDDFSVNGEVYDVPASLPNVITVSATDNNGNLSSFSNYGNS 212 (294)
T ss_pred HHHHHHHCCCEEEEeCCCCCcccccccccccccccccccccCCcceecccccCceEEEEeeCCCCCcCccccCCCC
Confidence 66688899999999999999754 2457888999999999999999999999865
No 29
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases. Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.
Probab=99.97 E-value=4.1e-30 Score=242.84 Aligned_cols=193 Identities=25% Similarity=0.336 Sum_probs=138.3
Q ss_pred CcccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCC--CCC--CCCCC
Q 045717 131 NSGFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKS--EPP--TDNEG 206 (374)
Q Consensus 131 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~--~d~~g 206 (374)
+..+|..+++|+||+|+||||||++.||+|.++... ...++|.... ..+ .|..+
T Consensus 28 ~~~~w~~g~~G~gv~VaViDtGv~~~h~~l~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~g 85 (297)
T cd04059 28 VTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDP----------------------EASYDFNDNDPDPTPRYDDDNS 85 (297)
T ss_pred cHHHHhCCCCCcceEEEEEeCCcccCCHhHhhcccc----------------------cccccccCCCCCCCCccccccc
Confidence 567999999999999999999999999999865211 0122232221 112 27889
Q ss_pred CccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCC
Q 045717 207 HGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQH 286 (374)
Q Consensus 207 HGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~ 286 (374)
|||||||+|+|...+.. ...||||+|+|+.+|+++.. ........++.++.+ .++|||||||......
T Consensus 86 HGT~vAgiiag~~~~~~--------~~~GvAp~a~l~~~~~~~~~---~~~~~~~~~~~~~~~-~~~Vin~S~g~~~~~~ 153 (297)
T cd04059 86 HGTRCAGEIAAVGNNGI--------CGVGVAPGAKLGGIRMLDGD---VTDVVEAESLGLNPD-YIDIYSNSWGPDDDGK 153 (297)
T ss_pred cCcceeeEEEeecCCCc--------ccccccccceEeEEEecCCc---cccHHHHHHHhcccC-CceEEECCCCCCCCCC
Confidence 99999999999853321 23799999999999999765 233445555555544 4699999999765311
Q ss_pred -----ChhhHHHHHHHHHHHHh-CCcEEEEecCCCCCC--CCCC--CCCCCCEEEEeeecCCCceeeeeEeCCCceEEee
Q 045717 287 -----KEFHANAIAIAAFKAVK-KGIFVSISAGNWGPK--PFSV--VNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGE 356 (374)
Q Consensus 287 -----~~~~~~~~~~~~~~a~~-~Gi~vV~AAGN~g~~--~~~~--p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~ 356 (374)
......++..++.+..+ +|+++|+||||+|.. .+.+ ++..+++|+|||++.+++.+.||++|..+.+...
T Consensus 154 ~~~~~~~~~~~a~~~a~~~~~~~~gilvV~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~g~~~~~s~~g~~~~~~a~ 233 (297)
T cd04059 154 TVDGPGPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAP 233 (297)
T ss_pred ccCCCcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCCCCCCCCCcccCCCceEEEEeeCCCCCCcCCCCCCCcEEEEec
Confidence 22334444433333332 799999999999973 2222 3677999999999999999999999999877644
Q ss_pred e
Q 045717 357 S 357 (374)
Q Consensus 357 ~ 357 (374)
+
T Consensus 234 g 234 (297)
T cd04059 234 S 234 (297)
T ss_pred C
Confidence 4
No 30
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=1.6e-29 Score=228.81 Aligned_cols=182 Identities=21% Similarity=0.241 Sum_probs=131.8
Q ss_pred ccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCCCC
Q 045717 143 GVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFVNG 222 (374)
Q Consensus 143 gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~ 222 (374)
||+|+||||||+++||+|+++..... . ... ..+........|..+|||||||+|++
T Consensus 1 gV~VaViDsGi~~~h~~l~~~~~~~~------------~------~~~-~~~~~~~~~~~d~~gHGT~vAgiia~----- 56 (222)
T cd07492 1 GVRVAVIDSGVDTDHPDLGNLALDGE------------V------TID-LEIIVVSAEGGDKDGHGTACAGIIKK----- 56 (222)
T ss_pred CCEEEEEeCCCCCCChhhhccccccc------------c------ccc-cccccCCCCCCCCCCcHHHHHHHHHc-----
Confidence 79999999999999999986521100 0 000 01122225567889999999999964
Q ss_pred CCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHHHH
Q 045717 223 ANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAFKA 301 (374)
Q Consensus 223 ~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a 301 (374)
.+|+++|+.+|+++.. + +..++++++++|+++++++|||||||........ .+..++.++
T Consensus 57 -------------~~p~~~i~~~~v~~~~--~~~~~~~~~~ai~~a~~~~v~Vin~S~G~~~~~~~~----~~~~~~~~a 117 (222)
T cd07492 57 -------------YAPEAEIGSIKILGED--GRCNSFVLEKALRACVENDIRIVNLSLGGPGDRDFP----LLKELLEYA 117 (222)
T ss_pred -------------cCCCCeEEEEEEeCCC--CCcCHHHHHHHHHHHHHCCCCEEEeCCCCCCCCcCH----HHHHHHHHH
Confidence 4699999999999877 5 7788899999999999999999999987631123 334444588
Q ss_pred HhCCcEEEEecCCCCCCCCCCCCCCCCEEEEeeecCCCceeeeeEeCCCceEEeeeccccCCCCCCcccc
Q 045717 302 VKKGIFVSISAGNWGPKPFSVVNDAPWMLTVGASTTDRSIVTSVQLGNQETYDGESLLQWTDIPSEQLPL 371 (374)
Q Consensus 302 ~~~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~~~~g~~~~~~~~~~~~~~~~ 371 (374)
.++|+++|+||||++... .+|+..++||+||+.+.++..+.| +...++..++....+..+...|..
T Consensus 118 ~~~g~l~V~aagN~~~~~-~~Pa~~~~vi~V~~~~~~~~~~~~---~~~~~~~apg~~i~~~~~~~~~~~ 183 (222)
T cd07492 118 YKAGGIIVAAAPNNNDIG-TPPASFPNVIGVKSDTADDPKSFW---YIYVEFSADGVDIIAPAPHGRYLT 183 (222)
T ss_pred HHCCCEEEEECCCCCCCC-CCCccCCceEEEEecCCCCCcccc---cCCceEEeCCCCeEeecCCCCEEE
Confidence 888999999999998653 348999999999999887765443 555555544444333333334433
No 31
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins. The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.96 E-value=3.9e-29 Score=235.89 Aligned_cols=178 Identities=39% Similarity=0.578 Sum_probs=133.8
Q ss_pred CCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCC---------------CCCCC
Q 045717 141 GKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEP---------------PTDNE 205 (374)
Q Consensus 141 G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------------~~d~~ 205 (374)
|+||+|+|||+||+++||+|.++.. .+.++...++|...... ..|..
T Consensus 1 G~gV~VaViDsGi~~~hp~l~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (295)
T cd07474 1 GKGVKVAVIDTGIDYTHPDLGGPGF------------------PNDKVKGGYDFVDDDYDPMDTRPYPSPLGDASAGDAT 62 (295)
T ss_pred CCCCEEEEEECCcCCCCcccccCCC------------------CCCceeeeeECccCCCCcccccccccccccCCCCCCC
Confidence 7999999999999999999985321 22345555555543322 23488
Q ss_pred CCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCC
Q 045717 206 GHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQ 285 (374)
Q Consensus 206 gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~ 285 (374)
+|||||||+|+|...+. ..+.|+||+|+|+.+|+++... .....+++.+++|+++++++|||||||.....
T Consensus 63 ~HGT~vAgiiag~~~n~--------~~~~Giap~a~i~~~~~~~~~~-~~~~~~~~~ai~~a~~~~~~Iin~S~g~~~~~ 133 (295)
T cd07474 63 GHGTHVAGIIAGNGVNV--------GTIKGVAPKADLYAYKVLGPGG-SGTTDVIIAAIEQAVDDGMDVINLSLGSSVNG 133 (295)
T ss_pred CcHHHHHHHHhcCCCcc--------CceEeECCCCeEEEEEeecCCC-CCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCC
Confidence 99999999999885442 2348999999999999998541 37888999999999999999999999976532
Q ss_pred CChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCCC--CCCCCCCEEEEeeecC-----CCceeeeeEeCC
Q 045717 286 HKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPFS--VVNDAPWMLTVGASTT-----DRSIVTSVQLGN 349 (374)
Q Consensus 286 ~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~--~p~~~~~vitVgA~~~-----~~~~~~~s~~G~ 349 (374)
....+..++.++.++|+++|+||||+|..... .|+..+++|+|||++. ......+++.|.
T Consensus 134 ----~~~~~~~~~~~~~~~gil~V~aAGN~g~~~~~~~~pa~~~~~i~Vga~~~~~~~~~~~~~~~~s~~~ 200 (295)
T cd07474 134 ----PDDPDAIAINNAVKAGVVVVAAAGNSGPAPYTIGSPATAPSAITVGASTVADVAEADTVGPSSSRGP 200 (295)
T ss_pred ----CCCHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCCcCCCeEEEeeeeccCcCCCCceeccCCCCC
Confidence 12334444558889999999999999976554 4788999999999762 334445555543
No 32
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure
Probab=99.96 E-value=4.9e-29 Score=247.00 Aligned_cols=167 Identities=26% Similarity=0.308 Sum_probs=119.7
Q ss_pred CCCCccEEEEeecccCCCCCCCCC-CCCCCCCCccCCccccCCCCcCCceeeeeeeCC------------CCCCCCCCCC
Q 045717 139 NFGKGVIIGVVDSGIGPTHPSFGD-KDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFL------------NKSEPPTDNE 205 (374)
Q Consensus 139 ~~G~gv~VaViDtGid~~Hpdf~~-~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~d~~ 205 (374)
.+|+||+|||||||||+.||+|.. .+.+++...|++....+.... ....+.++.. ....+..|..
T Consensus 1 ltG~GV~VaVIDtGId~~hp~F~~~dg~tRi~~~wDq~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~p~~~~~~~D~~ 78 (455)
T cd07478 1 LTGKGVLVGIIDTGIDYLHPEFRNEDGTTRILYIWDQTIPGGPPPG--GYYGGGEYTEEIINAALASDNPYDIVPSRDEN 78 (455)
T ss_pred CCCCceEEEEEECCCCCCCHHHccCCCCchhHHhhhCcCCCCCCCc--cccCceEEeHHHHHHHHhcCCccccCcCCCCC
Confidence 479999999999999999999994 467889999999876543210 0011111110 0113457899
Q ss_pred CCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCC---------CCCHHHHHHHHHHHHHC-----C
Q 045717 206 GHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNG---------TCPESSVSAALDAAIED-----G 271 (374)
Q Consensus 206 gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~---------g~~~s~i~~ai~~a~~~-----~ 271 (374)
||||||||||||+..++ ..+.||||+|+|+.+|++..... .+..++++.||+|+++. +
T Consensus 79 GHGThvAGIiag~~~~~--------~~~~GvAp~a~l~~vk~~~~~~~~~~~~~~~~~~~~~~i~~ai~~~~~~a~~~~~ 150 (455)
T cd07478 79 GHGTHVAGIAAGNGDNN--------PDFKGVAPEAELIVVKLKQAKKYLREFYEDVPFYQETDIMLAIKYLYDKALELNK 150 (455)
T ss_pred CchHHHHHHHhcCCCCC--------CCccccCCCCcEEEEEeecCCCcccccccccccCcHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999986432 23489999999999999987721 14688999999998874 4
Q ss_pred CcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhC-CcEEEEecCCCCC
Q 045717 272 VDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKK-GIFVSISAGNWGP 317 (374)
Q Consensus 272 ~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~-Gi~vV~AAGN~g~ 317 (374)
+.|||||||...+.+ .....+++++..+... |++||+||||+|.
T Consensus 151 p~VInlSlG~~~g~~--~g~~~l~~~i~~~~~~~gv~vV~aaGNeg~ 195 (455)
T cd07478 151 PLVINISLGTNFGSH--DGTSLLERYIDAISRLRGIAVVVGAGNEGN 195 (455)
T ss_pred CeEEEEccCcCCCCC--CCccHHHHHHHHHHhhCCeEEEEeCCCCCC
Confidence 789999999864322 1222333333355554 9999999999974
No 33
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.96 E-value=2e-29 Score=237.40 Aligned_cols=172 Identities=23% Similarity=0.176 Sum_probs=127.6
Q ss_pred cEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCCCCC
Q 045717 144 VIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFVNGA 223 (374)
Q Consensus 144 v~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~ 223 (374)
.+|||||||||.+||+|.++. .....+........|..+|||||||||++...+
T Consensus 1 p~VaviDtGi~~~hp~l~~~~------------------------~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~-- 54 (291)
T cd04847 1 PIVCVLDSGINRGHPLLAPAL------------------------AEDDLDSDEPGWTADDLGHGTAVAGLALYGDLT-- 54 (291)
T ss_pred CEEEEecCCCCCCChhhhhhh------------------------ccccccccCCCCcCCCCCChHHHHHHHHcCccc--
Confidence 379999999999999998651 111222221122678999999999999876432
Q ss_pred CcccCCCcccccccccceEeeeecccCCC---CCCCHHHHHHHHHHHHHCC---CcEEEeCcCCCCCCCCh---hhHHHH
Q 045717 224 NILGQANGTAVGMAPLAHLAMYKACDDYN---GTCPESSVSAALDAAIEDG---VDVLSLSIGLGPYQHKE---FHANAI 294 (374)
Q Consensus 224 ~~~g~~~g~~~GvAp~a~i~~~kv~~~~~---~g~~~s~i~~ai~~a~~~~---~~Vin~S~G~~~~~~~~---~~~~~~ 294 (374)
.....|+||+|+|+.+|+++... .....++++++|+|+++++ ++|||||||........ .+...+
T Consensus 55 ------~~~~~gvap~~~l~~~kv~~~~g~~~~~~~~~~~~~ai~~a~~~~~~~~~ViN~SlG~~~~~~~~~~~~~~~~i 128 (291)
T cd04847 55 ------LPGNGLPRPGCRLESVRVLPPNGENDPELYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPIDDGRPSSWAAAL 128 (291)
T ss_pred ------CCCCCCcccceEEEEEEEcCCCCCCCccChHHHHHHHHHHHHHhCCCceeEEEEecCCCCCccCCCCCcHHHHH
Confidence 12237999999999999998861 1256778999999999864 49999999986531111 222222
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCC------------CCCCCCCEEEEeeecCCCceeeeeEeCCC
Q 045717 295 AIAAFKAVKKGIFVSISAGNWGPKPFS------------VVNDAPWMLTVGASTTDRSIVTSVQLGNQ 350 (374)
Q Consensus 295 ~~~~~~a~~~Gi~vV~AAGN~g~~~~~------------~p~~~~~vitVgA~~~~~~~~~~s~~G~~ 350 (374)
. +.+.++|++||+||||+|.+.+. .|+.++++|+|||++.++..+.||++|..
T Consensus 129 d---~~a~~~gvlvV~aAGN~g~~~~~~~~~~~~~~~i~~Pa~~~~vItVgA~~~~~~~~~~s~~~~~ 193 (291)
T cd04847 129 D---QLAAEYDVLFVVSAGNLGDDDAADGPPRIQDDEIEDPADSVNALTVGAITSDDDITDRARYSAV 193 (291)
T ss_pred H---HHhccCCeEEEEECCCCCccccccccccccccccCCHHHhhhheeeeeeecCccCCCccccccc
Confidence 2 24568999999999999987653 36788999999999999999888888754
No 34
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.96 E-value=5.9e-29 Score=234.24 Aligned_cols=157 Identities=25% Similarity=0.305 Sum_probs=123.0
Q ss_pred CcccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCC-CCCCCCCCCCCcc
Q 045717 131 NSGFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLN-KSEPPTDNEGHGT 209 (374)
Q Consensus 131 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~d~~gHGT 209 (374)
+..+|..+++|+||+|+||||||+..|| |.++++. .. . .+.. ......|+.||||
T Consensus 10 ~~~~~~~G~~G~Gv~VaViDTGv~~~h~-~~~~~~~-------~~------------~----~~~~~~~~~~~D~~gHGT 65 (298)
T cd07494 10 ATRVHQRGITGRGVRVAMVDTGFYAHPF-FESRGYQ-------VR------------V----VLAPGATDPACDENGHGT 65 (298)
T ss_pred hhHHHhcCCCCCCcEEEEEeCCCcCCch-hhcCCcc-------ce------------e----ecCCCCCCCCCCCCCcch
Confidence 4669999999999999999999999888 7654221 00 0 0110 1134568889999
Q ss_pred chhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCC--
Q 045717 210 HTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHK-- 287 (374)
Q Consensus 210 hVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~-- 287 (374)
|||+++ .||||+|+|+.+|+++. ..++++++|+|+++++++|||||||.......
T Consensus 66 ~vag~i------------------~GvAP~a~i~~vkv~~~-----~~~~~~~ai~~a~~~g~dVIn~SlG~~~~~~~~~ 122 (298)
T cd07494 66 GESANL------------------FAIAPGAQFIGVKLGGP-----DLVNSVGAFKKAISLSPDIISNSWGYDLRSPGTS 122 (298)
T ss_pred heeece------------------eEeCCCCeEEEEEccCC-----CcHHHHHHHHHHHhcCCCEEEeecccCCCCcccc
Confidence 999876 69999999999999864 34678999999999999999999998542111
Q ss_pred -----hhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCCEEEEeeecC
Q 045717 288 -----EFHANAIAIAAFKAVKKGIFVSISAGNWGPKPFSVVNDAPWMLTVGASTT 337 (374)
Q Consensus 288 -----~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~p~~~~~vitVgA~~~ 337 (374)
......+..++.++.++|++||+||||++. .+|+..|+||+|||++.
T Consensus 123 ~~~~~~~~~~al~~ai~~A~~~Gi~vVaAAGN~~~---~~Pa~~p~viaVga~~~ 174 (298)
T cd07494 123 WSRSLPNALKALAATLQDAVARGIVVVFSAGNGGW---SFPAQHPEVIAAGGVFV 174 (298)
T ss_pred cccccchhhHHHHHHHHHHHHCCcEEEEeCCCCCC---CcCCCCCCEEEEEeEec
Confidence 123445677777899999999999999974 57999999999999854
No 35
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases. Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.
Probab=99.96 E-value=7.5e-28 Score=223.31 Aligned_cols=183 Identities=25% Similarity=0.271 Sum_probs=137.3
Q ss_pred CCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccC
Q 045717 140 FGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTF 219 (374)
Q Consensus 140 ~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~ 219 (374)
+|+||+|+|||+|++++||+|.++........+ ..........|..+|||||||+|+|..
T Consensus 1 tG~gv~VaiiDsG~~~~h~~l~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~HGT~vagiiag~~ 60 (267)
T cd04848 1 TGAGVKVGVIDSGIDLSHPEFAGRVSEASYYVA--------------------VNDAGYASNGDGDSHGTHVAGVIAAAR 60 (267)
T ss_pred CCCceEEEEEeCCCCCCCccccCcccccccccc--------------------cccccCCCCCCCCChHHHHHHHHhcCc
Confidence 699999999999999999999875222110000 000011345678999999999999985
Q ss_pred CCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCC---------hhh
Q 045717 220 VNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGVDVLSLSIGLGPYQHK---------EFH 290 (374)
Q Consensus 220 ~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~---------~~~ 290 (374)
.+ ..+.|+||+|+|+.+|+++..........+.++++++.+.+++|||||||....... ...
T Consensus 61 ~~---------~~~~GiAp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~ 131 (267)
T cd04848 61 DG---------GGMHGVAPDATLYSARASASAGSTFSDADIAAAYDFLAASGVRIINNSWGGNPAIDTVSTTYKGSAATQ 131 (267)
T ss_pred CC---------CCcccCCcCCEEEEEeccCCCCcccchHHHHHHHHHHHhCCCeEEEccCCCCCcccccccchhhhcccc
Confidence 33 234899999999999999876211567788999999999999999999998762111 113
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCCCCCC---------CCCCCCEEEEeeecCCCceeee--eEeCCCc
Q 045717 291 ANAIAIAAFKAVKKGIFVSISAGNWGPKPFSV---------VNDAPWMLTVGASTTDRSIVTS--VQLGNQE 351 (374)
Q Consensus 291 ~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~---------p~~~~~vitVgA~~~~~~~~~~--s~~G~~~ 351 (374)
...+......+.++|++||+||||++...... |+..+++|+|||++.++....+ |++|...
T Consensus 132 ~~~~~~~~~~~~~~gi~iv~aaGN~~~~~~~~~~~~~~~~~~~~~~~vi~Vga~~~~~~~~~~~~s~~~~~~ 203 (267)
T cd04848 132 GNTLLAALARAANAGGLFVFAAGNDGQANPSLAAAALPYLEPELEGGWIAVVAVDPNGTIASYSYSNRCGVA 203 (267)
T ss_pred chHHHHHHHHHhhCCeEEEEeCCCCCCCCCccccccccccCccccCCEEEEEEecCCCCcccccccccchhh
Confidence 44555566688999999999999998654332 4567899999999999998888 8888653
No 36
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=9.5e-28 Score=231.32 Aligned_cols=269 Identities=22% Similarity=0.267 Sum_probs=195.0
Q ss_pred CCCceEEEEeCCCCCCCCCccccHHHHHHhhccccc-cCCCCccccccceEEEeccccceEEEEcC-----HHHHHHHhc
Q 045717 29 NDLQTYIVYVQEPKHGNFSKEIDLESWYHSFLPATI-SSNSIDDDHQSRMVHCYRHVISGFAARLT-----AEEVKVMET 102 (374)
Q Consensus 29 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~l~~l~~ 102 (374)
.-+.+|||.|+..... ..+..++++.+.... ..++. ......-..|..-|..+.++-. +-.+++|..
T Consensus 47 vve~EyIv~F~~y~~A-----k~r~syi~skl~gS~VtnWri--ipR~Npa~~YPsDF~vl~i~e~~k~~~~~~ierLe~ 119 (1033)
T KOG4266|consen 47 VVESEYIVRFKQYKPA-----KDRRSYIESKLRGSGVTNWRI--IPRINPATKYPSDFGVLWIEESGKEAVVGEIERLEM 119 (1033)
T ss_pred eecceeEEEecccccc-----hHHHHHHHHHhhcCCCCceeE--eeccCccccCCCccceEEEeccCccchhheeeehhc
Confidence 3467899999987654 456666666665221 01100 1111222345555555555332 224788999
Q ss_pred CCCceEEEecceeccccC------------------------------CCCcccCcc-----C-------CcccccCCCC
Q 045717 103 KSGFISAHVENTLQLHTT------------------------------HTPRFLGLH-----Q-------NSGFWKDSNF 140 (374)
Q Consensus 103 ~p~V~~v~~~~~~~~~~~------------------------------~~~~~~~~~-----~-------~~~~~~~~~~ 140 (374)
.|.|+.+.|.+.+.+... ..+..|+.. + ++-+|..+++
T Consensus 120 hp~vk~v~pqr~V~r~l~y~~~~~~p~n~t~~~~~~qg~~~~r~a~~s~~~~n~~RHl~a~~rQv~s~l~Ad~LWk~GyT 199 (1033)
T KOG4266|consen 120 HPDVKVVFPQRRVLRGLSYPDGKKRPGNITTSMSFEQGTESSRMADTSNTTLNWSRHLLAQKRQVTSMLGADHLWKKGYT 199 (1033)
T ss_pred CCCceeecchhhhhhcccccccCCCCCcceeeeeccccccccCCccccccccccchhhhhhhHHHHHHhchhhHHhcccc
Confidence 999999998776543100 000011111 0 4558999999
Q ss_pred CCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccchhccccccCC
Q 045717 141 GKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHTSSTAAGTFV 220 (374)
Q Consensus 141 G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~ 220 (374)
|++|+|||+|||+..+||-|+.- .....| .+. ..-.|..||||.|||+||+...
T Consensus 200 Ga~VkvAiFDTGl~~~HPHFrnv---KERTNW----------------------TNE-~tLdD~lgHGTFVAGvia~~~e 253 (1033)
T KOG4266|consen 200 GAKVKVAIFDTGLRADHPHFRNV---KERTNW----------------------TNE-DTLDDNLGHGTFVAGVIAGRNE 253 (1033)
T ss_pred CCceEEEEeecccccCCccccch---hhhcCC----------------------cCc-cccccCcccceeEeeeeccchh
Confidence 99999999999999999999742 011223 221 5567889999999999998841
Q ss_pred CCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCCCCCCChhhHHHHHHHHH
Q 045717 221 NGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLGPYQHKEFHANAIAIAAF 299 (374)
Q Consensus 221 ~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~ 299 (374)
..|.||+++|+..|||... . .+.+++++|++||+-.+.+|+|+|.|++. +.+-++-..+.
T Consensus 254 ------------c~gfa~d~e~~~frvft~~--qVSYTSWFLDAFNYAI~~kidvLNLSIGGPD-----fmD~PFVeKVw 314 (1033)
T KOG4266|consen 254 ------------CLGFASDTEIYAFRVFTDA--QVSYTSWFLDAFNYAIATKIDVLNLSIGGPD-----FMDLPFVEKVW 314 (1033)
T ss_pred ------------hcccCCccceeEEEeeccc--eeehhhHHHHHHHHHHhhhcceEeeccCCcc-----cccchHHHHHH
Confidence 3899999999999999876 4 78999999999999999999999999976 34444555555
Q ss_pred HHHhCCcEEEEecCCCCCCCCCC--CCCCCCEEEEeeecCCCceeeeeEeCC
Q 045717 300 KAVKKGIFVSISAGNWGPKPFSV--VNDAPWMLTVGASTTDRSIVTSVQLGN 349 (374)
Q Consensus 300 ~a~~~Gi~vV~AAGN~g~~~~~~--p~~~~~vitVgA~~~~~~~~~~s~~G~ 349 (374)
+....++++|.|+||+|+-..+. |++...||.||.++-|+.+++||+.|-
T Consensus 315 EltAnNvIMvSAiGNDGPLYGTLNNPaDQsDViGVGGIdfdD~IA~FSSRGM 366 (1033)
T KOG4266|consen 315 ELTANNVIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDFDDHIASFSSRGM 366 (1033)
T ss_pred hhccCcEEEEEecCCCCcceeecCCcccccceeeeccccccchhhhhccCCc
Confidence 78899999999999999877665 688899999999999999999999874
No 37
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification. ; InterPro: IPR000209 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase families S8 (subfamilies S8A (subtilisin) and S8B (kexin)) and S53 (sedolisin) both of which are members of clan SB. The subtilisin family is the second largest serine protease family characterised to date. Over 200 subtilises are presently known, more than 170 of which with their complete amino acid sequence []. It is widespread, being found in eubacteria, archaebacteria, eukaryotes and viruses []. The vast majority of the family are endopeptidases, although there is an exopeptidase, tripeptidyl peptidase [, ]. Structures have been determined for several members of the subtilisin family: they exploit the same catalytic triad as the chymotrypsins, although the residues occur in a different order (HDS in chymotrypsin and DHS in subtilisin), but the structures show no other similarity [, ]. Some subtilisins are mosaic proteins, while others contain N- and C-terminal extensions that show no sequence similarity to any other known protein []. Based on sequence homology, a subdivision into six families has been proposed []. The proprotein-processing endopeptidases kexin, furin and related enzymes form a distinct subfamily known as the kexin subfamily (S8B). These preferentially cleave C-terminally to paired basic amino acids. Members of this subfamily can be identified by subtly different motifs around the active site [, ]. Members of the kexin family, along with endopeptidases R, T and K from the yeast Tritirachium and cuticle-degrading peptidase from Metarhizium, require thiol activation. This can be attributed to the presence of Cys-173 near to the active histidine [].Only 1 viral member of the subtilisin family is known, a 56kDa protease from herpes virus 1, which infects the channel catfish []. Sedolisins (serine-carboxyl peptidases) are proteolytic enzymes whose fold resembles that of subtilisin; however, they are considerably larger, with the mature catalytic domains containing approximately 375 amino acids. The defining features of these enzymes are a unique catalytic triad, Ser-Glu-Asp, as well as the presence of an aspartic acid residue in the oxyanion hole. High-resolution crystal structures have now been solved for sedolisin from Pseudomonas sp. 101, as well as for kumamolisin from a thermophilic bacterium, Bacillus sp. MN-32. Mutations in the human gene leads to a fatal neurodegenerative disease []. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3EIF_A 1XF1_B 3F7M_A 3F7O_B 2QTW_B 2W2O_A 3GCX_A 3P5B_A 3M0C_B 2XTJ_A ....
Probab=99.94 E-value=1.6e-26 Score=216.45 Aligned_cols=178 Identities=34% Similarity=0.497 Sum_probs=139.0
Q ss_pred EEEEeecccCCCCCCCC-CCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCC---CCCCCCCCCccchhccccccC-
Q 045717 145 IIGVVDSGIGPTHPSFG-DKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKS---EPPTDNEGHGTHTSSTAAGTF- 219 (374)
Q Consensus 145 ~VaViDtGid~~Hpdf~-~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~d~~gHGThVAGiiag~~- 219 (374)
+|+|||||||++||+|. ++- ...++...++|.+.. ....|..+|||||||+|++..
T Consensus 1 ~V~viDtGid~~h~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~HGT~va~ii~~~~~ 61 (282)
T PF00082_consen 1 KVAVIDTGIDPNHPDFSSGNF-------------------IWSKVPGGYNFVDGNPNPSPSDDDNGHGTHVAGIIAGNGG 61 (282)
T ss_dssp EEEEEESBBTTTSTTTTCTTE-------------------EEEEEEEEEETTTTBSTTTSSSTSSSHHHHHHHHHHHTTS
T ss_pred CEEEEcCCcCCCChhHccCCc-------------------ccccccceeeccCCCCCcCccccCCCccchhhhhcccccc
Confidence 69999999999999998 430 112334466676553 456778999999999999986
Q ss_pred CCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHH-HCCCcEEEeCcCCCCCCCChhhHHHHHHHH
Q 045717 220 VNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAI-EDGVDVLSLSIGLGPYQHKEFHANAIAIAA 298 (374)
Q Consensus 220 ~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~-~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~ 298 (374)
.++ ....|+||+++|+.+|+++.. +....+++.++++++ +.+++|||||||...........+.+....
T Consensus 62 ~~~--------~~~~Gva~~a~l~~~~i~~~~--~~~~~~~~~ai~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~ 131 (282)
T PF00082_consen 62 NNG--------PGINGVAPNAKLYSYKIFDNS--GGTSSDLIEAIEYAVKNDGVDVINLSFGSNSGPPDPSYSDILEEAI 131 (282)
T ss_dssp SSS--------SSETCSSTTSEEEEEECSSTT--SEEHHHHHHHHHHHHHHTTSSEEEECEEBEESSSHSHHHHHHHHHH
T ss_pred ccc--------ccccccccccccccccccccc--ccccccccchhhhhhhccCCcccccccccccccccccccccccccc
Confidence 221 223899999999999998776 567888999999999 889999999998822111334455566666
Q ss_pred HHHHhCCcEEEEecCCCCCCCC---CCCCCCCCEEEEeeecCCCceeeeeEeCCCc
Q 045717 299 FKAVKKGIFVSISAGNWGPKPF---SVVNDAPWMLTVGASTTDRSIVTSVQLGNQE 351 (374)
Q Consensus 299 ~~a~~~Gi~vV~AAGN~g~~~~---~~p~~~~~vitVgA~~~~~~~~~~s~~G~~~ 351 (374)
..+.++|+++|+||||+|.... .+|+..+++|+||+++.+++.+.||++|...
T Consensus 132 ~~~~~~g~l~v~aaGN~~~~~~~~~~~Pa~~~~vi~Vg~~~~~~~~~~~s~~g~~~ 187 (282)
T PF00082_consen 132 DYAEKKGILIVFAAGNNGPNDDRNISFPASSPNVITVGAVDNNGQPASYSNYGGPS 187 (282)
T ss_dssp HHHHHTTEEEEEE--SSSSBTTBTGEBTTTSTTSEEEEEEETTSSBSTTSSBSTTE
T ss_pred ccccccCcceeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999997765 4688889999999999999999999998765
No 38
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members hav
Probab=99.90 E-value=1.2e-22 Score=184.50 Aligned_cols=181 Identities=31% Similarity=0.397 Sum_probs=137.0
Q ss_pred cEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCC---CCCCCCCCCccchhccccccCC
Q 045717 144 VIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKS---EPPTDNEGHGTHTSSTAAGTFV 220 (374)
Q Consensus 144 v~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~d~~gHGThVAGiiag~~~ 220 (374)
|+|+|||+|++++||+|.... .. ....+++.... ....+..+|||||+++|++...
T Consensus 1 v~VaiiD~G~~~~~~~~~~~~---------~~------------~~~~~~~~~~~~~~~~~~~~~~HGt~va~~i~~~~~ 59 (241)
T cd00306 1 VTVAVIDTGVDPDHPDLDGLF---------GG------------GDGGNDDDDNENGPTDPDDGNGHGTHVAGIIAASAN 59 (241)
T ss_pred CEEEEEeCCCCCCCcchhccc---------cC------------cccccccccCcCCCCCCCCCCCcHHHHHHHHhcCCC
Confidence 689999999999999862110 00 00011111110 2456788999999999998853
Q ss_pred CCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHH-HCCCcEEEeCcCCCCCCCChhhHHHHHHHH
Q 045717 221 NGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAI-EDGVDVLSLSIGLGPYQHKEFHANAIAIAA 298 (374)
Q Consensus 221 ~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~-~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~ 298 (374)
+.. ..|+||+++|+.+|+.... + .....+++++++++ ..+++|||||||..... ....+...+
T Consensus 60 ~~~---------~~g~a~~a~i~~~~~~~~~--~~~~~~~~~~ai~~~~~~~~~~iin~S~g~~~~~----~~~~~~~~~ 124 (241)
T cd00306 60 NGG---------GVGVAPGAKLIPVKVLDGD--GSGSSSDIAAAIDYAAADQGADVINLSLGGPGSP----PSSALSEAI 124 (241)
T ss_pred CCC---------CEEeCCCCEEEEEEEecCC--CCcCHHHHHHHHHHHHhccCCCEEEeCCCCCCCC----CCHHHHHHH
Confidence 321 1699999999999998876 4 67888999999999 89999999999987631 122333344
Q ss_pred HHHHhC-CcEEEEecCCCCCCCC---CCCCCCCCEEEEeeecCCCcee-eeeEeCCCceEEeeeccc
Q 045717 299 FKAVKK-GIFVSISAGNWGPKPF---SVVNDAPWMLTVGASTTDRSIV-TSVQLGNQETYDGESLLQ 360 (374)
Q Consensus 299 ~~a~~~-Gi~vV~AAGN~g~~~~---~~p~~~~~vitVgA~~~~~~~~-~~s~~G~~~~~~g~~~~~ 360 (374)
.++..+ |+++|+|+||++.... ..|+..+++|+||+++.+.... .+++++....+...+...
T Consensus 125 ~~~~~~~~~i~V~aaGN~~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~~~~~~~~~~~~apg~~~ 191 (241)
T cd00306 125 DYALAKLGVLVVAAAGNDGPDGGTNIGYPAASPNVIAVGAVDRDGTPASPSSNGGAGVDIAAPGGDI 191 (241)
T ss_pred HHHHHhcCeEEEEecCCCCCCCCCCccCCccCCceEEEEecCcCCCccCCcCCCCCCceEEeCcCCc
Confidence 466666 9999999999998877 5789999999999999999988 899999998888555443
No 39
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.86 E-value=1.8e-21 Score=178.26 Aligned_cols=141 Identities=16% Similarity=0.086 Sum_probs=98.1
Q ss_pred CCCCCCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHH--HHCCCcEEEe
Q 045717 200 PPTDNEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAA--IEDGVDVLSL 277 (374)
Q Consensus 200 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a--~~~~~~Vin~ 277 (374)
...|.++|||||||||+|. .|++|+++++..++... ..+.+..+++|+ .+.+++||||
T Consensus 32 ~~~~~~~HGThVAgiiag~---------------~~~~p~a~~~~~~~~~~-----~~~~~~~~i~~~~~~~~gv~VINm 91 (247)
T cd07488 32 RNNTFDDHATLVASIMGGR---------------DGGLPAVNLYSSAFGIK-----SNNGQWQECLEAQQNGNNVKIINH 91 (247)
T ss_pred CCCCCCCHHHHHHHHHHhc---------------cCCCCccceehhhhCCC-----CCCccHHHHHHHHHhcCCceEEEe
Confidence 3557999999999999997 46779999987655321 233466788888 5678999999
Q ss_pred CcCCCCCCCCh---hhHHHHHHHHHHHHhC-CcEEEEecCCCCCCCC-----CCCCCCCCEEEEeeecCCCceee---ee
Q 045717 278 SIGLGPYQHKE---FHANAIAIAAFKAVKK-GIFVSISAGNWGPKPF-----SVVNDAPWMLTVGASTTDRSIVT---SV 345 (374)
Q Consensus 278 S~G~~~~~~~~---~~~~~~~~~~~~a~~~-Gi~vV~AAGN~g~~~~-----~~p~~~~~vitVgA~~~~~~~~~---~s 345 (374)
|||........ .....+..++..+..+ |+++|+||||+|.+.+ ..|+..+++|+|||++.+++++. ||
T Consensus 92 S~G~~~~~~~~~~~~~~~~l~~aid~~a~~~GvlvV~AAGN~g~~~~~~~~i~~pa~~~nvItVGA~d~~g~~~~~s~~s 171 (247)
T cd07488 92 SYGEGLKRDPRAVLYGYALLSLYLDWLSRNYEVINVFSAGNQGKEKEKFGGISIPTLAYNSIVVGSTDRNGDRFFASDVS 171 (247)
T ss_pred CCccCCCCCccccccccchHHHHHHHHHhhCCEEEEEecCCCCCCccCCCCcCCccccCCeEEEEEecCCCCcceecccc
Confidence 99986531100 0112234444455555 9999999999998543 34688899999999999997654 45
Q ss_pred EeC--------CCceEEeeeccc
Q 045717 346 QLG--------NQETYDGESLLQ 360 (374)
Q Consensus 346 ~~G--------~~~~~~g~~~~~ 360 (374)
|++ ...+|..++...
T Consensus 172 n~~~~~~~~~~~~~di~APG~~i 194 (247)
T cd07488 172 NAGSEINSYGRRKVLIVAPGSNY 194 (247)
T ss_pred cccCCCCCCCCceeEEEEeeeeE
Confidence 543 345565444433
No 40
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=2e-20 Score=172.03 Aligned_cols=178 Identities=20% Similarity=0.256 Sum_probs=127.8
Q ss_pred CcccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCC------C
Q 045717 131 NSGFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTD------N 204 (374)
Q Consensus 131 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d------~ 204 (374)
+.++|..+++|++|+++|+|.||||-||||+. |++--..|+|..+++.|+. .
T Consensus 150 v~~awa~g~tgknvttaimddgvdymhpdlk~----------------------nynaeasydfssndpfpyprytddwf 207 (629)
T KOG3526|consen 150 VAEAWALGYTGKNVTTAIMDDGVDYMHPDLKS----------------------NYNAEASYDFSSNDPFPYPRYTDDWF 207 (629)
T ss_pred HHHHHhhcccCCCceEEeecCCchhcCcchhc----------------------ccCceeecccccCCCCCCCcccchhh
Confidence 56799999999999999999999999999973 3344456777766543332 5
Q ss_pred CCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHH-CCCcEEEeCcCCCC
Q 045717 205 EGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIE-DGVDVLSLSIGLGP 283 (374)
Q Consensus 205 ~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~-~~~~Vin~S~G~~~ 283 (374)
+.|||.|||-+++...|+ +|| .|||++.++..+|+++.. ++.|+|+|-..-.+ ++.+|.+-|||...
T Consensus 208 nshgtrcagev~aardng--icg------vgvaydskvagirmldqp----ymtdlieansmghep~kihiysaswgptd 275 (629)
T KOG3526|consen 208 NSHGTRCAGEVVAARDNG--ICG------VGVAYDSKVAGIRMLDQP----YMTDLIEANSMGHEPSKIHIYSASWGPTD 275 (629)
T ss_pred hccCccccceeeeeccCC--cee------eeeeeccccceeeecCCc----hhhhhhhhcccCCCCceEEEEecccCcCC
Confidence 899999999888776554 444 699999999999999865 88888887544333 35789999999866
Q ss_pred CCC-----ChhhHHHHHHHHHHHH-hCCcEEEEecCCCCCC-CCCCC--CCCCCEEEEeeecCCCcee
Q 045717 284 YQH-----KEFHANAIAIAAFKAV-KKGIFVSISAGNWGPK-PFSVV--NDAPWMLTVGASTTDRSIV 342 (374)
Q Consensus 284 ~~~-----~~~~~~~~~~~~~~a~-~~Gi~vV~AAGN~g~~-~~~~p--~~~~~vitVgA~~~~~~~~ 342 (374)
.+. -.....++.+.+.+-+ ..|-++|+|+|..|.+ .|++. +.+-|.|++-+.-.|++.+
T Consensus 276 dgktvdgprnatmraiv~gvnegrnglgsiyvwasgdgge~ddcncdgyaasmwtisinsaindg~na 343 (629)
T KOG3526|consen 276 DGKTVDGPRNATMRAIVRGVNEGRNGLGSIYVWASGDGGEDDDCNCDGYAASMWTISINSAINDGENA 343 (629)
T ss_pred CCcccCCchhHHHHHHHHhhhcccCCcccEEEEecCCCCCccccCCccchhheEEEEeehhhcCCccc
Confidence 322 1112233332222222 3568999999999964 44554 5667889987766666544
No 41
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=1.3e-19 Score=182.51 Aligned_cols=146 Identities=26% Similarity=0.284 Sum_probs=107.8
Q ss_pred CCCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCC-CCHHHHHHHHHHHHHCCCcEEEeCcCCC
Q 045717 204 NEGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGT-CPESSVSAALDAAIEDGVDVLSLSIGLG 282 (374)
Q Consensus 204 ~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g-~~~s~i~~ai~~a~~~~~~Vin~S~G~~ 282 (374)
...||||||||++|+...... ..||||+|+|+++++.|...+. -+...+..|+..++++++||||||||-.
T Consensus 309 Sg~HGTHVAgIa~anhpe~p~--------~NGvAPgaqIvSl~IGD~RLgsMETgtaltRA~~~v~e~~vDiINmSyGE~ 380 (1304)
T KOG1114|consen 309 SGPHGTHVAGIAAANHPETPE--------LNGVAPGAQIVSLKIGDGRLGSMETGTALTRAMIEVIEHNVDIINMSYGED 380 (1304)
T ss_pred CCCCcceehhhhccCCCCCcc--------ccCCCCCCEEEEEEecCccccccccchHHHHHHHHHHHhcCCEEEeccCcc
Confidence 356999999999999765433 3799999999999998876433 3345688999999999999999999976
Q ss_pred CCCCChhhHHHHHHHHHHHHhCCcEEEEecCCCCCCCCCCC---CCCCCEEEEeeecCC--------------Cceeeee
Q 045717 283 PYQHKEFHANAIAIAAFKAVKKGIFVSISAGNWGPKPFSVV---NDAPWMLTVGASTTD--------------RSIVTSV 345 (374)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~p---~~~~~vitVgA~~~~--------------~~~~~~s 345 (374)
.. .+.....++.......++|+++|.+|||+|+..+++. +....||.|||--.. .+.-.+|
T Consensus 381 a~--~pn~GRviEl~~e~vnKr~vI~VsSAGN~GPaltTVGaPggtTssvIgVGAYVsp~mm~a~y~~~e~vp~~~YtWs 458 (1304)
T KOG1114|consen 381 AH--LPNSGRVIELLRELVNKRGVIYVSSAGNNGPALTTVGAPGGTTSSVIGVGAYVSPGMMQAEYSVREPVPSNPYTWS 458 (1304)
T ss_pred CC--CCCcchHHHHHHHHhhhccEEEEEeCCCCCCceeeccCCCCcccceEeeeeecCHHHHHhhhhhhccCCCCccccc
Confidence 53 3444444554445667899999999999999888773 566799999993221 2233577
Q ss_pred EeCCCceEE-eeecc
Q 045717 346 QLGNQETYD-GESLL 359 (374)
Q Consensus 346 ~~G~~~~~~-g~~~~ 359 (374)
++|+..+=. |++++
T Consensus 459 SRgP~~DG~lGVsi~ 473 (1304)
T KOG1114|consen 459 SRGPCLDGDLGVSIS 473 (1304)
T ss_pred cCCCCcCCCcceEEe
Confidence 887764322 44443
No 42
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=6.9e-19 Score=176.43 Aligned_cols=195 Identities=24% Similarity=0.384 Sum_probs=146.9
Q ss_pred CcccccC--CCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCC--CCCCCC
Q 045717 131 NSGFWKD--SNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEP--PTDNEG 206 (374)
Q Consensus 131 ~~~~~~~--~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~d~~g 206 (374)
....|.. ..+|+||+|+|+|+|++..||+|.++.. ..++|.+.... ..|..+
T Consensus 129 ~~~~~~~~~~~~g~gv~~~vid~gv~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~d~~~ 184 (508)
T COG1404 129 VGALVANGAGLTGKGVTVAVIDTGVDASHPDLAGSAV------------------------AGGDFVDGDPEPPFLDDNG 184 (508)
T ss_pred cccccccccCCCCCCeEEEEeccCCCCCChhhhcccc------------------------cccccccCCCCCCCCCCCC
Confidence 3457776 8999999999999999999999986511 11344444333 578999
Q ss_pred CccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCC--CcEEEeCcCCCCC
Q 045717 207 HGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDG--VDVLSLSIGLGPY 284 (374)
Q Consensus 207 HGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~--~~Vin~S~G~~~~ 284 (374)
|||||+|++++.... ......|++|+++++.++++....+....++++.+++|+.+.+ +++||||+|...
T Consensus 185 hGt~vag~ia~~~~~-------~~~~~~g~a~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~in~s~g~~~- 256 (508)
T COG1404 185 HGTHVAGTIAAVIFD-------NGAGVAGVAPGAKLLLVKVLGSGGGSGELSDVAEGIEGAANLGGPADVINLSLGGSL- 256 (508)
T ss_pred Ccceeeeeeeeeccc-------CCCccccccCCCcEEEEEeccCCCCcccHHHHHHHHHHHHhcCCCCcEEEecCCCCc-
Confidence 999999999984211 1112389999999999999986532478888899999999998 999999999851
Q ss_pred CCChhhHHHHHHHHHHHHhCC-cEEEEecCCCCCCC----CCCCCCCC--CEEEEeeecCCCceeeeeEeCCC--ceEEe
Q 045717 285 QHKEFHANAIAIAAFKAVKKG-IFVSISAGNWGPKP----FSVVNDAP--WMLTVGASTTDRSIVTSVQLGNQ--ETYDG 355 (374)
Q Consensus 285 ~~~~~~~~~~~~~~~~a~~~G-i~vV~AAGN~g~~~----~~~p~~~~--~vitVgA~~~~~~~~~~s~~G~~--~~~~g 355 (374)
.......+..+...+...| +++|+|+||.|.+. ..+|+..+ .+++|||++..+..+.||++|.. +.+..
T Consensus 257 --~~~~~~~~~~a~~~~~~~g~v~~v~aagn~~~~~~~~~~~~p~~~~~~~~i~v~a~~~~~~~~~~s~~g~~~~~~~~a 334 (508)
T COG1404 257 --SDSASPALGDALAAAANAGGVVIVAAAGNDGSNASGGDLAYPASYPAPNVIAVGALDLSDTVASFSNDGSPTGVDIAA 334 (508)
T ss_pred --cccccHHHHHHHHHHHHcCCEEEEEecccCCCCCccccccCCcccCCCceEEEecCCCCCccccccccCCCCCcceeC
Confidence 1112233344444777777 99999999999876 34566555 99999999998899999999985 55554
Q ss_pred eecc
Q 045717 356 ESLL 359 (374)
Q Consensus 356 ~~~~ 359 (374)
++..
T Consensus 335 pg~~ 338 (508)
T COG1404 335 PGVN 338 (508)
T ss_pred CCcc
Confidence 4444
No 43
>cd04056 Peptidases_S53 Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-
Probab=99.34 E-value=6.1e-12 Score=121.92 Aligned_cols=106 Identities=25% Similarity=0.214 Sum_probs=86.2
Q ss_pred ccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHC---CCcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhCCcEE
Q 045717 232 TAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIED---GVDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKKGIFV 308 (374)
Q Consensus 232 ~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~---~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~v 308 (374)
.+.||||+|+|+.+++.+.. ...++.++.+++.. +++|||||||.........+.+.+..+..++..+||+|
T Consensus 82 ~~~gvAP~a~i~~~~~~~~~-----~~~~~~a~~~ai~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gitv 156 (361)
T cd04056 82 YAGAIAPGANITLYFAPGTV-----TNGPLLAFLAAVLDNPNLPSVISISYGEPEQSLPPAYAQRVCNLFAQAAAQGITV 156 (361)
T ss_pred HHHhccCCCeEEEEEECCcC-----ccHHHHHHHHHHHcCCCCCCEEEccCCccccccCHHHHHHHHHHHHHHHhCCeEE
Confidence 34899999999999997653 34577888888877 89999999998764323445567777777999999999
Q ss_pred EEecCCCCCCCC-----------CCCCCCCCEEEEeeecCCCcee
Q 045717 309 SISAGNWGPKPF-----------SVVNDAPWMLTVGASTTDRSIV 342 (374)
Q Consensus 309 V~AAGN~g~~~~-----------~~p~~~~~vitVgA~~~~~~~~ 342 (374)
|+||||+|...+ .+|+.+|+|++||+++......
T Consensus 157 vaAsGd~G~~~~~~~~~~~~~~~~~Pas~P~V~sVGgt~~~~~~~ 201 (361)
T cd04056 157 LAASGDSGAGGCGGDGSGTGFSVSFPASSPYVTAVGGTTLYTGGT 201 (361)
T ss_pred EEeCCCCCCCCCCCCCCCCcccCCCCCCCCceeeeecccccCCCc
Confidence 999999997654 4689999999999999987654
No 44
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Limited proteolysis of most large protein precursors is carried out in vivo by the subtilisin-like pro-protein convertases. Many important biological processes such as peptide hormone synthesis, viral protein processing and receptor maturation involve proteolytic processing by these enzymes []. The subtilisin-serine protease (SRSP) family hormone and pro-protein convertases (furin, PC1/3, PC2, PC4, PACE4, PC5/6, and PC7/7/LPC) act within the secretory pathway to cleave polypeptide precursors at specific basic sites, generating their biologically active forms. Serum proteins, pro-hormones, receptors, zymogens, viral surface glycoproteins, bacterial toxins, amongst others, are activated by this route []. The SRSPs share the same domain structure, including a signal peptide, the pro-peptide, the catalytic domain, the P/middle or homo B domain, and the C terminus. Proteinase propeptide inhibitors (sometimes refered to as activation peptides) are responsible for the modulation of folding and activity of the pro-enzyme or zymogen. The pro-segment docks into the enzyme moiety shielding the substrate binding site, thereby promoting inhibition of the enzyme. Several such propeptides share a similar topology [], despite often low sequence identities []. The propeptide region has an open-sandwich antiparallel-alpha/antiparallel-beta fold, with two alpha-helices and four beta-strands with a (beta/alpha/beta)x2 topology. This group of sequences contain the propeptide domain at the N terminus of peptidases belonging to MEROPS family S8A, subtilisins. A number of the members of this group of sequences belong to MEROPS inhibitor family I9, clan I-. The propeptide is removed by proteolytic cleavage; removal activating the enzyme.; GO: 0004252 serine-type endopeptidase activity, 0042802 identical protein binding, 0043086 negative regulation of catalytic activity; PDB: 3CNQ_P 1SPB_P 3CO0_P 1ITP_A 1V5I_B 1SCJ_B 3P5B_P 2XTJ_P 2W2M_P 2P4E_P ....
Probab=98.95 E-value=2e-09 Score=81.32 Aligned_cols=81 Identities=22% Similarity=0.433 Sum_probs=57.8
Q ss_pred eEEEEeCCCCCCCCCccccHHHHHHhhccccccCCCCccccccceEEEeccccceEEEEcCHHHHHHHhcCCCceEEEec
Q 045717 33 TYIVYVQEPKHGNFSKEIDLESWYHSFLPATISSNSIDDDHQSRMVHCYRHVISGFAARLTAEEVKVMETKSGFISAHVE 112 (374)
Q Consensus 33 ~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~p~V~~v~~~ 112 (374)
+|||+|+++..... ....+.+++.+++.+..... ...+.++.+.|...++||+++++++.+++|+++|+|++|+||
T Consensus 1 ~YIV~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~y~~~~~Gfs~~l~~~~i~~L~~~p~V~~Ve~D 76 (82)
T PF05922_consen 1 RYIVVFKDDASAAS-SFSSHKSWQASILKSALKSA---SSINAKVLYSYDNAFNGFSAKLSEEEIEKLRKDPGVKSVEPD 76 (82)
T ss_dssp EEEEEE-TTSTHHC-HHHHHHHHHH----HHHHTH----TTT-EEEEEESSTSSEEEEEE-HHHHHHHHTSTTEEEEEEE
T ss_pred CEEEEECCCCCcch-hHHHHHHHHHHHHhhhhhhh---cccCCceEEEEeeeEEEEEEEeCHHHHHHHHcCCCeEEEEeC
Confidence 69999999865433 12566677765554321100 145889999999889999999999999999999999999999
Q ss_pred ceecc
Q 045717 113 NTLQL 117 (374)
Q Consensus 113 ~~~~~ 117 (374)
..+++
T Consensus 77 ~~v~l 81 (82)
T PF05922_consen 77 QVVSL 81 (82)
T ss_dssp CEEEE
T ss_pred ceEec
Confidence 98875
No 45
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=2.1e-06 Score=84.57 Aligned_cols=175 Identities=19% Similarity=0.210 Sum_probs=111.9
Q ss_pred CcccccCCCCCCccEEEEeecccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCC------CCCCC
Q 045717 131 NSGFWKDSNFGKGVIIGVVDSGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSE------PPTDN 204 (374)
Q Consensus 131 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~d~ 204 (374)
+...|..+++|+++.|+++|+|+...||++... +...+.+++..... +....
T Consensus 22 v~~~~~~~~~g~~~~~~i~ddgl~~~h~~~~~~----------------------~~~~~s~d~~~~~~~p~~~~~~~~~ 79 (431)
T KOG3525|consen 22 VQNAWCKGYTGTRVSVTILDDGLECSHPDLRNN----------------------YDPLGSYDVNRHDNDPEPRCDGTNE 79 (431)
T ss_pred eeeccccCCCCCceEEEEeeccccccCcccccc----------------------cCcceeEeeecCCCCcccccCCCCc
Confidence 567999999999999999999999999999743 22333444443321 12235
Q ss_pred CCCccchhccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHC-CCcEEEeCcCCCC
Q 045717 205 EGHGTHTSSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIED-GVDVLSLSIGLGP 283 (374)
Q Consensus 205 ~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~-~~~Vin~S~G~~~ 283 (374)
..|||.|++-++...++... ..|+++++++..++++... .++...+....... .+++-..||+...
T Consensus 80 ~~~g~~Ca~~~a~~~~~~~C--------~vg~~~~~~~~g~~~l~~~-----v~~~~~~~~~~~~~~~~di~scsw~pdd 146 (431)
T KOG3525|consen 80 NKHGTRCAGCVAARANNLTC--------GVGVAYNATIGGIRMLAGC-----VSDAVEAPSLGFGPCHIDIYSCSWGPDD 146 (431)
T ss_pred cccCCCCCcccccccCCCcC--------CCCcccCccccceeeeeee-----cccceecccccCCCCCceeecCcCCccc
Confidence 88999999999987533222 2799999999999998754 11222332222232 4789999999865
Q ss_pred CCC-----ChhhHHHHHHHHH-HHHhCCcEEEEecCCCCCCCCCCC--CCCC--CEEEEeeecCCCc
Q 045717 284 YQH-----KEFHANAIAIAAF-KAVKKGIFVSISAGNWGPKPFSVV--NDAP--WMLTVGASTTDRS 340 (374)
Q Consensus 284 ~~~-----~~~~~~~~~~~~~-~a~~~Gi~vV~AAGN~g~~~~~~p--~~~~--~vitVgA~~~~~~ 340 (374)
.+. ......++..... ....+|.+.|+|.||.|...+..+ ...+ ..++.+.++..+.
T Consensus 147 d~~t~~~~~~l~~~~~~~~~~~g~~~~gs~~v~as~ngg~~~d~c~c~~y~~~i~t~~~~~~~~~~~ 213 (431)
T KOG3525|consen 147 DGKTCDGPGTLAREALVYGRGCGRHGKGSIFVWASGNGGTCGDSCHCDGYTNSIYTLSISCATQCGK 213 (431)
T ss_pred CCCcCCCCcchhhhhhhccccccccCCCCeeEEEecCccccccccccccccCcceecccccccccCC
Confidence 322 1122222221111 234678999999999998766554 3333 3444455444443
No 46
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.46 E-value=0.001 Score=71.58 Aligned_cols=165 Identities=17% Similarity=0.144 Sum_probs=93.0
Q ss_pred ccccCCCCCCccEEEEee-cccCCCCCCCCCCCCCCCCCccCCccccCCCCcCCceeeeeeeCCCCCCCCCCCCCCccch
Q 045717 133 GFWKDSNFGKGVIIGVVD-SGIGPTHPSFGDKDMPPPPAKWRGKCEFAGGAGCNNKIIGARNFLNKSEPPTDNEGHGTHT 211 (374)
Q Consensus 133 ~~~~~~~~G~gv~VaViD-tGid~~Hpdf~~~~~~~~~~~w~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~gHGThV 211 (374)
.+...+.+|+|++||||| -|-.+...|+. ..|++-.... ....++.- . ....+|+||=
T Consensus 219 ~l~~~g~tGkG~tIaIid~yG~p~~~~dl~--------~Fd~~~Gip~---~~~~~V~~----i------g~g~~~~~~g 277 (1174)
T COG4934 219 ALYESGATGKGETIAIIDAYGDPYNNQDLY--------SFDQQYGIPN---PILSRVTY----I------GPGIGSGTGG 277 (1174)
T ss_pred ecccCCCCCCCcEEEEEeccCCcccHHHHH--------HHHHhhCCCC---CCceEEEE----e------CCCCCCCCCc
Confidence 345567889999999999 55544433332 1222111110 01111111 0 1245666664
Q ss_pred hccccccCCCCCCcccCCCcccccccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCCC-cEEEeCcCCCC--CCCCh
Q 045717 212 SSTAAGTFVNGANILGQANGTAVGMAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDGV-DVLSLSIGLGP--YQHKE 288 (374)
Q Consensus 212 AGiiag~~~~~~~~~g~~~g~~~GvAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~~-~Vin~S~G~~~--~~~~~ 288 (374)
+.-+. .+..-..-+||+|+|..+-.- ....+.+..++.+....-. -++-.||+... ....+
T Consensus 278 ~~E~s-----------LDVE~s~A~AP~A~I~lvvap-----~~~~~a~dna~n~~~~~~~s~~ip~S~s~~~~~~~~~~ 341 (1174)
T COG4934 278 AEETS-----------LDVEWSHAMAPKANIDLVVAP-----NPLVSALDNAYNEVLYYMVSFVIPISWSYAEFQGPISP 341 (1174)
T ss_pred cccce-----------eehhhhhccCccCceEEEEcC-----CCceehhhHHHHHHHHhhhcccccchhHHHHhccCCCh
Confidence 43221 111223678999999998762 2233333344443332211 33335666422 11133
Q ss_pred hhHHHHHHHHHHHHhCCcEEEEecCCCCCCCC--------CCCCCCCCEEEEee
Q 045717 289 FHANAIAIAAFKAVKKGIFVSISAGNWGPKPF--------SVVNDAPWMLTVGA 334 (374)
Q Consensus 289 ~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~--------~~p~~~~~vitVgA 334 (374)
.+-+.+.....++..+|+.+++|+|..|.... .+|+++|.|.+||.
T Consensus 342 ~~~~~~d~l~~qasaeGITi~AASGD~Gay~~~~~~~~sv~~PasSPYVtsVGG 395 (1174)
T COG4934 342 GYADLMDLLYEQASAEGITIFAASGDSGAYDDTPTPYLSVNFPASSPYVTSVGG 395 (1174)
T ss_pred HHHHHHHHHHHHhhccceEEEEecccccccCCCcccceeecccCCCccEEeecC
Confidence 35556666666899999999999999986553 35799999999999
No 47
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=30.76 E-value=63 Score=22.46 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=12.5
Q ss_pred ChhHHHHHHHHHHhhh-hhhcccccCc
Q 045717 1 MASILISLFFIISFSP-AIAGISNFES 26 (374)
Q Consensus 1 ~~sl~l~~~~~~~~~~-~~~~~~~~~~ 26 (374)
|++.++++.||+..+. ..+++++++.
T Consensus 1 MA~Kl~vialLC~aLva~vQ~APQYa~ 27 (65)
T PF10731_consen 1 MASKLIVIALLCVALVAIVQSAPQYAP 27 (65)
T ss_pred CcchhhHHHHHHHHHHHHHhcCcccCC
Confidence 5666554444443333 3444555544
No 48
>PRK03719 ecotin; Provisional
Probab=28.29 E-value=1.2e+02 Score=26.00 Aligned_cols=20 Identities=0% Similarity=0.200 Sum_probs=14.9
Q ss_pred cCcCCCCCceEEEEeCCCCC
Q 045717 24 FESDINDLQTYIVYVQEPKH 43 (374)
Q Consensus 24 ~~~~~~~~~~yIV~l~~~~~ 43 (374)
++.++..-.|+|++|....+
T Consensus 40 yP~p~~G~~r~Vi~Lp~~~~ 59 (166)
T PRK03719 40 YPQAEKGMKRQVITLPPQED 59 (166)
T ss_pred CCCCCCCCEEEEEEcCCCCC
Confidence 45566667899999988654
No 49
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=25.53 E-value=2.6e+02 Score=26.40 Aligned_cols=76 Identities=22% Similarity=0.195 Sum_probs=48.7
Q ss_pred cccceEeeeecccCCCCCCCHHHHHHHHHHHHHCC----CcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhCCcEEEEec
Q 045717 237 APLAHLAMYKACDDYNGTCPESSVSAALDAAIEDG----VDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKKGIFVSISA 312 (374)
Q Consensus 237 Ap~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~----~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AA 312 (374)
.|.+++..+.+.=.+ -.....|+.||..+.+.+ +|||-+-=||+.......|++. ..+.......++||.|-
T Consensus 39 ~~~~~~~~~p~~vQG--~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs~eDL~~FN~e--~varai~~~~~PvisaI 114 (319)
T PF02601_consen 39 NPIVEIILYPASVQG--EGAAASIVSALRKANEMGQADDFDVIIIIRGGGSIEDLWAFNDE--EVARAIAASPIPVISAI 114 (319)
T ss_pred CCCcEEEEEeccccc--cchHHHHHHHHHHHHhccccccccEEEEecCCCChHHhcccChH--HHHHHHHhCCCCEEEec
Confidence 455655555543322 257788999999998765 8999888887652112223222 22234456779999999
Q ss_pred CCCC
Q 045717 313 GNWG 316 (374)
Q Consensus 313 GN~g 316 (374)
|-+-
T Consensus 115 GHe~ 118 (319)
T PF02601_consen 115 GHET 118 (319)
T ss_pred CCCC
Confidence 9885
No 50
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=23.43 E-value=4e+02 Score=22.94 Aligned_cols=87 Identities=18% Similarity=0.093 Sum_probs=45.6
Q ss_pred HHHHHHHHHH-CCCcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhCCcEE-EEecCCCCCCCCCC----CCCCC-----C
Q 045717 260 VSAALDAAIE-DGVDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKKGIFV-SISAGNWGPKPFSV----VNDAP-----W 328 (374)
Q Consensus 260 i~~ai~~a~~-~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~v-V~AAGN~g~~~~~~----p~~~~-----~ 328 (374)
.-.+++.+.+ .|.+.|++|.|.+.. -.-.+.+ ..+..+..--++| +==-|..|...... -+..| +
T Consensus 12 A~ravE~aa~~iGgRCIS~S~GNPT~---lsG~elV-~lIk~a~~DPV~VMfDD~G~~g~G~GE~Al~~v~~h~~IeVLG 87 (180)
T PF14097_consen 12 AKRAVEIAAKNIGGRCISQSAGNPTP---LSGEELV-ELIKQAPHDPVLVMFDDKGFIGEGPGEQALEYVANHPDIEVLG 87 (180)
T ss_pred HHHHHHHHHHHhCcEEEeccCCCCCc---CCHHHHH-HHHHhCCCCCEEEEEeCCCCCCCCccHHHHHHHHcCCCceEEE
Confidence 4568888665 599999999998862 2222333 2333444333333 33455555443311 12232 5
Q ss_pred EEEEeeecCC--CceeeeeEeCCC
Q 045717 329 MLTVGASTTD--RSIVTSVQLGNQ 350 (374)
Q Consensus 329 vitVgA~~~~--~~~~~~s~~G~~ 350 (374)
+|.|++-+.. +.+..+|---.+
T Consensus 88 ~iAVASnT~~~~g~~VD~sidr~G 111 (180)
T PF14097_consen 88 AIAVASNTHGAEGTKVDVSIDRDG 111 (180)
T ss_pred EEEEEecCCCCCceEeEEEEcCCC
Confidence 6667665553 334445544333
No 51
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=22.21 E-value=4.2e+02 Score=26.50 Aligned_cols=78 Identities=21% Similarity=0.182 Sum_probs=53.2
Q ss_pred ccccceEeeeecccCCCCCCCHHHHHHHHHHHHHCC-CcEEEeCcCCCCCCCChhhHHHHHHHHHHHHhCCcEEEEecCC
Q 045717 236 MAPLAHLAMYKACDDYNGTCPESSVSAALDAAIEDG-VDVLSLSIGLGPYQHKEFHANAIAIAAFKAVKKGIFVSISAGN 314 (374)
Q Consensus 236 vAp~a~i~~~kv~~~~~~g~~~s~i~~ai~~a~~~~-~~Vin~S~G~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN 314 (374)
-.|.++++.+.+.=.. -.....|+.||+.+-+.+ +|||=..=|++.-.....+++. ..++......++||.|-|-
T Consensus 159 R~P~~~viv~pt~VQG--~~A~~eIv~aI~~an~~~~~DvlIVaRGGGSiEDLW~FNdE--~vaRAi~~s~iPvISAVGH 234 (440)
T COG1570 159 RFPSVEVIVYPTLVQG--EGAAEEIVEAIERANQRGDVDVLIVARGGGSIEDLWAFNDE--IVARAIAASRIPVISAVGH 234 (440)
T ss_pred hCCCCeEEEEeccccC--CCcHHHHHHHHHHhhccCCCCEEEEecCcchHHHHhccChH--HHHHHHHhCCCCeEeeccc
Confidence 3577888888775443 356778999999998876 9999888877651102222222 2233455778999999998
Q ss_pred CCC
Q 045717 315 WGP 317 (374)
Q Consensus 315 ~g~ 317 (374)
+-.
T Consensus 235 EtD 237 (440)
T COG1570 235 ETD 237 (440)
T ss_pred CCC
Confidence 853
Done!