BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045719
         (384 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
           virus 3 GN=IIV3-084L PE=3 SV=1
          Length = 844

 Score = 34.7 bits (78), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 23/174 (13%)

Query: 163 NKQPKQKVYKKNSLKSNPFVNEFPAALQSYIHHIKDVAPDGNCGFRAIADLMGF--GEN- 219
           +KQP+   YK  +    P+ +      QS  + +K V+ DGNC FR++   +    GE  
Sbjct: 564 SKQPELPKYKGRT----PYTD-LEQLAQSKGYTVKQVSGDGNCLFRSVCKSIRALRGEKF 618

Query: 220 GWLQVRKDLLNELHLNMEHYSHLYGTY---ERVNELIHAISYFENCPGSDKW---MTMPD 273
              Q+R+ +++ L  N E +  +Y  Y   +R N L     Y         W   + +  
Sbjct: 619 THRQLRQMVVDYLRENPE-FLQVYLEYVARQRDNSLPSTEQYLSEMSKCGTWGDLICLKT 677

Query: 274 MGHLIASAYNIVVFHLSMKQCLTFLPLRSNPVPTDSRKEIAIGFVNNNHFVEVF 327
           +  ++   +N+++ +    Q ++           D    I +G+++N H+  + 
Sbjct: 678 LSEILKVQFNLLILNTKQFQMVSSQ--------DDYPDVIPLGYIDNYHYTSLV 723


>sp|Q9RKB9|TRI2_STRCO Putative tricorn protease homolog 2 OS=Streptomyces coelicolor
           (strain ATCC BAA-471 / A3(2) / M145) GN=tri2 PE=3 SV=1
          Length = 1171

 Score = 33.5 bits (75), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 180 PFVNEFPAALQSYIHHIKDVAPD---GNCGFRAIADLMGFGENGWLQVRKDLLNEL 232
           P V+E P   Q ++   ++V  +   G CG+  I D+   G +GW Q  +DL  E+
Sbjct: 937 PLVDERPLRYQDWVAKRREVVRELSGGRCGYLHIPDM---GGSGWAQFNRDLRMEV 989


>sp|Q9V0L2|AAT_PYRAB Aspartate aminotransferase OS=Pyrococcus abyssi (strain GE5 /
           Orsay) GN=aspC PE=3 SV=1
          Length = 389

 Score = 32.3 bits (72), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 56  KLDLIRNHNKRKVEMSYGPIFDLIAKRFNENDDDMKLHILQKLAE------------IAN 103
           +LDL+     RK+      + D+I+    E D D   HI +   E            I  
Sbjct: 6   RLDLVNPSEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDMGLTHYGPNIGL 65

Query: 104 PHTTSLIEPEAKK--NTRGRPNSK------ANASTCRDPSAFEIVLSGKEICSPTVAFMR 155
           P     I  + KK  N    PN +      AN +     SAF  +  G+E+  PT AF+ 
Sbjct: 66  PELREAIAEKLKKQNNIEADPNKEIMVLVGANQAFLMGLSAF--LKDGEEVLIPTPAFVS 123

Query: 156 --PAVKVNGNKQPKQKVYKKNSLKSN 179
             PAV + G K  +   Y++N  + N
Sbjct: 124 YAPAVILAGGKPVEVPTYEENEFRLN 149


>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
          Length = 443

 Score = 31.6 bits (70), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 41/201 (20%), Positives = 87/201 (43%), Gaps = 33/201 (16%)

Query: 187 AALQSYIHHIKDVAPDGNCGFRAIADLMGFGENGWLQVRKDLLNELHLNMEHYSHLY-GT 245
           A L+    + K VA DG+C FRA+A+ +   ++  ++VR   ++ L  N E +  +  G+
Sbjct: 27  AYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHCLRENREKFEAIIGGS 86

Query: 246 YERVNELIHAISYFENCPGSDKWMTMPDMGHLIASAYNIVV---FHLSMKQCLTFLPLRS 302
           +E          Y +      +W     +G +  SA +++    F  +++  ++   +  
Sbjct: 87  FE---------GYLKRLENPQEW-----VGQMEISALSLMYRKDFITNLEPNVSPSQVTE 132

Query: 303 NPVPTDSRKEIAIGFVNNNHFVEVFLLPGHPIPHVAINWQRFHSFCAK-GWETIYNHRIQ 361
           N  P    +++ + F N NH+  V+           + ++   + C    +E +Y    +
Sbjct: 133 NNFP----EKVLLCFSNGNHYDIVY----------PVKYKESSAMCQSLLYELLYEKVFK 178

Query: 362 HFKEIIGGDVATKEIIDVDNN 382
                I  ++ T E+ D DN+
Sbjct: 179 TDVSKIVMELDTLEVADEDNS 199


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.136    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,348,225
Number of Sequences: 539616
Number of extensions: 6786701
Number of successful extensions: 13682
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 13682
Number of HSP's gapped (non-prelim): 10
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)