Query 045721
Match_columns 273
No_of_seqs 45 out of 47
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 08:07:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045721.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045721hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fi8a_ b.47.1.2 (A:) Granzyme 14.8 38 0.0027 24.7 2.1 20 169-190 207-226 (227)
2 d1goia1 b.72.2.1 (A:447-498) C 10.5 24 0.0018 23.6 -0.2 16 196-211 37-52 (52)
3 d1ukxa_ d.20.1.3 (A:) EIF2-alp 9.9 75 0.0054 22.5 2.4 15 178-192 115-129 (137)
4 d2daxa1 d.20.1.3 (A:8-147) Unc 9.1 58 0.0043 22.7 1.5 14 178-191 118-131 (140)
5 g1avo.1 a.24.8.1 (A:,B:) Prote 8.0 95 0.0069 25.1 2.5 21 235-255 130-150 (200)
6 g1rtf.1 b.47.1.2 (A:,B:) Two-c 8.0 82 0.006 23.0 2.0 19 169-189 240-258 (260)
7 d1eq9a_ b.47.1.2 (A:) (alpha,g 7.9 72 0.0052 22.7 1.5 19 170-190 203-221 (222)
8 d2dawa1 d.20.1.3 (A:8-148) RWD 7.7 62 0.0045 22.8 1.1 14 178-191 120-133 (141)
9 d1eysh2 f.23.10.1 (H:7-43) Pho 7.5 1.3E+02 0.0092 18.8 2.4 22 214-235 5-26 (37)
10 d1fxya_ b.47.1.2 (A:) Coagulat 7.2 1.3E+02 0.0092 21.6 2.7 20 170-191 207-226 (228)
No 1
>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.78 E-value=38 Score=24.70 Aligned_cols=20 Identities=20% Similarity=0.539 Sum_probs=16.6
Q ss_pred hceeeeheehhhhhhHHHHHHh
Q 045721 169 VPLLYTVKRLFLIIDWINDAWF 190 (273)
Q Consensus 169 VPv~Yn~RRiF~i~dW~~~e~~ 190 (273)
.|-+|+ ||-.-.|||++.+.
T Consensus 207 ~p~vyt--~v~~y~~WI~~~i~ 226 (227)
T d1fi8a_ 207 TPRAFT--KVSTFLSWIKKTMK 226 (227)
T ss_dssp SCEEEE--EGGGGHHHHHHHHC
T ss_pred CCeEEE--EHHHHHHHHHHHHc
Confidence 377887 89999999998764
No 2
>d1goia1 b.72.2.1 (A:447-498) Chitinase B, C-terminal domain {Serratia marcescens [TaxId: 615]}
Probab=10.53 E-value=24 Score=23.60 Aligned_cols=16 Identities=44% Similarity=0.715 Sum_probs=13.1
Q ss_pred CCCccccceeeehhhH
Q 045721 196 ANAEVKDTAWYWFGRV 211 (273)
Q Consensus 196 ~~~~~~~~~w~~fGR~ 211 (273)
.+.+.+|++|+..||+
T Consensus 37 ss~PgSdsawlkvgrv 52 (52)
T d1goia1 37 TSAPGSDSAWLKVGRV 52 (52)
T ss_dssp CSCTTTCTTEEEEEEC
T ss_pred ccCCCCcchheeeccC
Confidence 3677889999999984
No 3
>d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.87 E-value=75 Score=22.51 Aligned_cols=15 Identities=7% Similarity=0.193 Sum_probs=11.6
Q ss_pred hhhhhhHHHHHHhhc
Q 045721 178 LFLIIDWINDAWFNK 192 (273)
Q Consensus 178 iF~i~dW~~~e~~~~ 192 (273)
||.+++|+++-+.+.
T Consensus 115 if~lv~~lqe~L~e~ 129 (137)
T d1ukxa_ 115 IFELAHHVQSFLSEH 129 (137)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 479999999766654
No 4
>d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.11 E-value=58 Score=22.71 Aligned_cols=14 Identities=7% Similarity=0.396 Sum_probs=11.8
Q ss_pred hhhhhhHHHHHHhh
Q 045721 178 LFLIIDWINDAWFN 191 (273)
Q Consensus 178 iF~i~dW~~~e~~~ 191 (273)
||.+++|+++...+
T Consensus 118 if~lve~lqe~~~~ 131 (140)
T d2daxa1 118 ILNATEWVREHASG 131 (140)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 37999999988775
No 5
>g1avo.1 a.24.8.1 (A:,B:) Proteasome activator reg(alpha) {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.04 E-value=95 Score=25.10 Aligned_cols=21 Identities=29% Similarity=0.517 Sum_probs=18.3
Q ss_pred HHHHHHHhhhHHHhhhhhhhh
Q 045721 235 RAFERYFKERDEIQGKMAEDK 255 (273)
Q Consensus 235 rAf~rYy~~~~e~~~k~a~d~ 255 (273)
..+.+||..|+++.+|.++.-
T Consensus 130 ~~i~kY~~~Rak~vsK~~KyP 150 (200)
T g1avo.1 130 TQISKYFSERGDAVTKAAKQP 150 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHhhCC
Confidence 567899999999999998764
No 6
>g1rtf.1 b.47.1.2 (A:,B:) Two-chain tissue plasminogen activator (TC)-T-PA {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.01 E-value=82 Score=22.99 Aligned_cols=19 Identities=42% Similarity=0.819 Sum_probs=15.3
Q ss_pred hceeeeheehhhhhhHHHHHH
Q 045721 169 VPLLYTVKRLFLIIDWINDAW 189 (273)
Q Consensus 169 VPv~Yn~RRiF~i~dW~~~e~ 189 (273)
.|.+|+ ||-.-.|||++.+
T Consensus 240 ~p~vyt--rv~~~~dWI~~~i 258 (260)
T g1rtf.1 240 VPGVYT--KVTNYLDWIRDNM 258 (260)
T ss_dssp CCEEEE--EGGGGHHHHHHHC
T ss_pred CCEEEE--EHHHHHHHHHHhc
Confidence 367776 9999999999764
No 7
>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}
Probab=7.85 E-value=72 Score=22.72 Aligned_cols=19 Identities=37% Similarity=0.690 Sum_probs=14.8
Q ss_pred ceeeeheehhhhhhHHHHHHh
Q 045721 170 PLLYTVKRLFLIIDWINDAWF 190 (273)
Q Consensus 170 Pv~Yn~RRiF~i~dW~~~e~~ 190 (273)
|.+|+ ||-.-.+||++.+.
T Consensus 203 p~vyt--~v~~y~~WI~~~i~ 221 (222)
T d1eq9a_ 203 PDVYT--RVSSFVSWINANLK 221 (222)
T ss_dssp CEEEE--EGGGGHHHHHHTSC
T ss_pred CcEEE--EHHHHHHHHHHHhc
Confidence 56776 88888999997654
No 8
>d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.69 E-value=62 Score=22.82 Aligned_cols=14 Identities=21% Similarity=0.508 Sum_probs=10.9
Q ss_pred hhhhhhHHHHHHhh
Q 045721 178 LFLIIDWINDAWFN 191 (273)
Q Consensus 178 iF~i~dW~~~e~~~ 191 (273)
||.+++|+++....
T Consensus 120 if~lv~~lqe~~~~ 133 (141)
T d2dawa1 120 VCAAIQWLQDNSAS 133 (141)
T ss_dssp HHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHH
Confidence 37999999977653
No 9
>d1eysh2 f.23.10.1 (H:7-43) Photosystem II reaction centre subunit H, transmembrane region {Thermochromatium tepidum [TaxId: 1050]}
Probab=7.50 E-value=1.3e+02 Score=18.78 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=18.0
Q ss_pred HHHHHHHHHhhhHhhhhhcchH
Q 045721 214 VANLAYFASNLFCFLIPLFLPR 235 (273)
Q Consensus 214 vANl~yw~~NLFgFLiP~fLPr 235 (273)
+|.++.|.|=+|.+.+=.||-|
T Consensus 5 ~Aql~ly~Fw~FFagLi~YL~r 26 (37)
T d1eysh2 5 AAQITIWAFWLFFFGLIIYLRR 26 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 6788999999999988777654
No 10
>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}
Probab=7.21 E-value=1.3e+02 Score=21.63 Aligned_cols=20 Identities=25% Similarity=0.703 Sum_probs=16.1
Q ss_pred ceeeeheehhhhhhHHHHHHhh
Q 045721 170 PLLYTVKRLFLIIDWINDAWFN 191 (273)
Q Consensus 170 Pv~Yn~RRiF~i~dW~~~e~~~ 191 (273)
|.+|+ ||-.-.+||++.+..
T Consensus 207 p~vft--~v~~~~~WI~~~i~~ 226 (228)
T d1fxya_ 207 PGVYT--KVYNYVKWIKNTIAA 226 (228)
T ss_dssp CEEEE--EGGGGHHHHHHHHHH
T ss_pred CEEEE--EHHHHHHHHHHHHHh
Confidence 56676 899999999988764
Done!