BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045722
MKWGQFLWLVESMNKNNAIANMSETKLSMHAGPHVDAPDHMFDHYFDVDSLDLEQFQHCF
NWICYICPELLVNFTKDKNILN

High Scoring Gene Products

Symbol, full name Information P value
AT4G35220 protein from Arabidopsis thaliana 3.5e-12
AT4G34180 protein from Arabidopsis thaliana 4.9e-11
AT1G44542 protein from Arabidopsis thaliana 8.5e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045722
        (82 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2122053 - symbol:AT4G35220 "AT4G35220" species...   165  3.5e-12   1
TAIR|locus:2124231 - symbol:AT4G34180 "AT4G34180" species...   154  4.9e-11   1
TAIR|locus:2823650 - symbol:AT1G44542 "AT1G44542" species...   153  8.5e-11   1


>TAIR|locus:2122053 [details] [associations]
            symbol:AT4G35220 "AT4G35220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA] Pfam:PF04199
            GO:GO:0005783 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
            HOGENOM:HOG000219455 InterPro:IPR007325 OMA:HTSKWPL EMBL:AF372956
            EMBL:AY074834 EMBL:AY085190 IPI:IPI00519989 RefSeq:NP_567979.1
            UniGene:At.2286 ProteinModelPortal:Q94JT5 SMR:Q94JT5 PRIDE:Q94JT5
            EnsemblPlants:AT4G35220.1 GeneID:829675 KEGG:ath:AT4G35220
            TAIR:At4g35220 InParanoid:Q94JT5 PhylomeDB:Q94JT5
            ProtClustDB:CLSN2917670 Genevestigator:Q94JT5 Uniprot:Q94JT5
        Length = 272

 Score = 165 (63.1 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 40/81 (49%), Positives = 50/81 (61%)

Query:     4 GQFLWLVESMNKNNAIANMSETKLSMHAGPHVDAPDHMFDHY----FDVDSLDLEQFQHC 59
             G+FLWL  SM KN ++AN SE K+  H G HVD+P H++D Y    FDVDSLDL+     
Sbjct:    79 GRFLWLAASM-KNGSLANNSEMKIPTHTGTHVDSPGHVYDKYYDAGFDVDSLDLQ----V 133

Query:    60 FNWICYICPELLVNFTKDKNI 80
              N +      LLV+  KDKNI
Sbjct:   134 LNGLA-----LLVDVPKDKNI 149


>TAIR|locus:2124231 [details] [associations]
            symbol:AT4G34180 "AT4G34180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005618 "cell wall" evidence=IDA]
            [GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0006623 "protein targeting to vacuole"
            evidence=RCA] [GO:0006833 "water transport" evidence=RCA]
            [GO:0006972 "hyperosmotic response" evidence=RCA] [GO:0007030
            "Golgi organization" evidence=RCA] [GO:0009266 "response to
            temperature stimulus" evidence=RCA] [GO:0046686 "response to
            cadmium ion" evidence=RCA] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] Pfam:PF04199 GO:GO:0005783 GO:GO:0005794
            GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009651
            eggNOG:COG1878 HOGENOM:HOG000219455 OMA:WEHIAHA InterPro:IPR007325
            EMBL:AY037228 EMBL:AF428442 EMBL:AY088629 EMBL:AY125547
            IPI:IPI00539419 RefSeq:NP_567957.1 UniGene:At.24487
            ProteinModelPortal:Q93V74 STRING:Q93V74 PaxDb:Q93V74 PRIDE:Q93V74
            EnsemblPlants:AT4G34180.1 GeneID:829566 KEGG:ath:AT4G34180
            TAIR:At4g34180 InParanoid:Q93V74 PhylomeDB:Q93V74
            ProtClustDB:CLSN2917665 Genevestigator:Q93V74 Uniprot:Q93V74
        Length = 255

 Score = 154 (59.3 bits), Expect = 4.9e-11, P = 4.9e-11
 Identities = 39/79 (49%), Positives = 48/79 (60%)

Query:     6 FLWLVESMNKNNAIANMSETKLSMHAGPHVDAPDHMFDHY----FDVDSLDLEQFQHCFN 61
             FL L  SM KN + AN+SE KLS+H+G HVDAP H +D+Y    FD DSLDL+       
Sbjct:    64 FLRLAASM-KNGSFANVSEMKLSVHSGTHVDAPGHFWDNYYDAGFDTDSLDLQVLNG--- 119

Query:    62 WICYICPELLVNFTKDKNI 80
                   P LLV+  +DKNI
Sbjct:   120 ------PALLVDVPRDKNI 132


>TAIR|locus:2823650 [details] [associations]
            symbol:AT1G44542 "AT1G44542" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF04199 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC084807 eggNOG:COG1878
            HOGENOM:HOG000219455 InterPro:IPR007325 EMBL:BT012646 EMBL:AK220578
            IPI:IPI00541425 RefSeq:NP_175091.1 UniGene:At.50651
            ProteinModelPortal:Q94LA9 SMR:Q94LA9 PaxDb:Q94LA9 PRIDE:Q94LA9
            EnsemblPlants:AT1G44542.1 GeneID:841032 KEGG:ath:AT1G44542
            TAIR:At1g44542 InParanoid:Q94LA9 OMA:IVDISHY PhylomeDB:Q94LA9
            ProtClustDB:CLSN2914339 Genevestigator:Q94LA9 Uniprot:Q94LA9
        Length = 271

 Score = 153 (58.9 bits), Expect = 8.5e-11, P = 8.5e-11
 Identities = 40/81 (49%), Positives = 49/81 (60%)

Query:     4 GQFLWLVESMNKNNAIANMSETKLSMHAGPHVDAPDHMFDHY----FDVDSLDLEQFQHC 59
             G FL L  SM KN + AN+S+ +LS+H+G HVDAP H  DHY    FD DSLDL+     
Sbjct:    78 GNFLRLAVSM-KNGSDANISKMELSVHSGTHVDAPGHFHDHYYESGFDTDSLDLQ----I 132

Query:    60 FNWICYICPELLVNFTKDKNI 80
              N      P LLV+  +DKNI
Sbjct:   133 LNG-----PALLVDVPRDKNI 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.468    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       82        82   0.00091  102 3  11 22  0.38    29
                                                     29  0.43    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  135 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.23u 0.14s 9.37t   Elapsed:  00:00:01
  Total cpu time:  9.24u 0.14s 9.38t   Elapsed:  00:00:01
  Start:  Fri May 10 02:16:16 2013   End:  Fri May 10 02:16:17 2013

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