Query 045731
Match_columns 444
No_of_seqs 222 out of 818
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:59:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045731.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045731hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 5.8E-71 1.2E-75 579.7 24.3 377 51-440 70-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 5.1E-54 1.1E-58 425.8 18.4 283 50-392 1-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 1.9E-23 4.2E-28 213.9 14.4 331 52-436 157-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.1 7.1E-10 1.5E-14 114.7 12.6 240 123-405 128-383 (691)
5 cd03814 GT1_like_2 This family 95.9 0.048 1E-06 53.7 9.7 96 310-413 257-352 (364)
6 PF00852 Glyco_transf_10: Glyc 95.4 0.023 4.9E-07 58.4 5.5 85 263-350 173-261 (349)
7 cd03794 GT1_wbuB_like This fam 95.3 0.089 1.9E-06 51.7 9.2 95 310-414 285-387 (394)
8 PF00534 Glycos_transf_1: Glyc 95.3 0.026 5.7E-07 50.5 4.9 86 310-405 83-170 (172)
9 PLN02871 UDP-sulfoquinovose:DA 95.1 0.11 2.3E-06 55.1 9.7 93 311-415 323-422 (465)
10 cd03822 GT1_ecORF704_like This 94.9 0.14 3.1E-06 50.4 9.3 93 311-414 259-355 (366)
11 cd03801 GT1_YqgM_like This fam 94.7 0.17 3.7E-06 48.9 9.1 94 310-413 266-362 (374)
12 cd03809 GT1_mtfB_like This fam 94.5 0.15 3.2E-06 50.3 8.3 93 310-414 263-357 (365)
13 TIGR03449 mycothiol_MshA UDP-N 94.0 0.2 4.3E-06 51.4 8.3 96 310-415 293-390 (405)
14 cd03821 GT1_Bme6_like This fam 94.0 0.24 5.2E-06 48.5 8.6 93 311-413 273-366 (375)
15 TIGR03088 stp2 sugar transfera 93.5 0.42 9E-06 48.4 9.5 91 311-413 264-359 (374)
16 cd05844 GT1_like_7 Glycosyltra 93.3 0.62 1.4E-05 46.5 10.3 95 310-414 255-358 (367)
17 cd04951 GT1_WbdM_like This fam 93.1 0.41 8.8E-06 47.4 8.6 94 311-413 254-347 (360)
18 PRK09814 beta-1,6-galactofuran 93.1 0.12 2.7E-06 52.2 4.9 88 310-412 217-317 (333)
19 cd03820 GT1_amsD_like This fam 92.8 0.75 1.6E-05 44.3 9.8 94 311-413 244-339 (348)
20 cd03823 GT1_ExpE7_like This fa 92.8 0.85 1.8E-05 44.5 10.2 89 311-407 254-343 (359)
21 cd03818 GT1_ExpC_like This fam 92.8 0.72 1.6E-05 47.4 10.0 132 265-413 243-387 (396)
22 cd03808 GT1_cap1E_like This fa 92.6 0.25 5.5E-06 47.9 6.2 93 310-412 254-349 (359)
23 PRK15427 colanic acid biosynth 92.6 1.1 2.5E-05 46.6 11.3 91 310-413 289-392 (406)
24 cd04962 GT1_like_5 This family 92.6 0.45 9.8E-06 47.6 8.1 93 311-413 262-357 (371)
25 cd03807 GT1_WbnK_like This fam 92.5 0.24 5.2E-06 48.3 5.8 94 311-414 260-354 (365)
26 TIGR02149 glgA_Coryne glycogen 92.4 0.69 1.5E-05 46.8 9.3 92 310-413 271-373 (388)
27 cd03800 GT1_Sucrose_synthase T 92.2 0.4 8.8E-06 48.3 7.2 96 311-414 294-390 (398)
28 cd03806 GT1_ALG11_like This fa 91.4 1.2 2.6E-05 46.7 9.9 136 265-414 273-414 (419)
29 cd03819 GT1_WavL_like This fam 91.0 0.58 1.3E-05 46.4 6.8 94 310-413 254-352 (355)
30 cd03798 GT1_wlbH_like This fam 91.0 0.82 1.8E-05 44.4 7.7 95 310-413 269-363 (377)
31 cd03816 GT1_ALG1_like This fam 90.5 1.6 3.5E-05 45.5 9.8 123 265-408 269-399 (415)
32 cd03804 GT1_wbaZ_like This fam 90.2 0.9 1.9E-05 45.5 7.4 42 310-353 252-293 (351)
33 PRK15484 lipopolysaccharide 1, 89.8 3.5 7.5E-05 42.4 11.6 96 310-414 267-365 (380)
34 cd04955 GT1_like_6 This family 89.3 2.5 5.4E-05 41.9 9.8 90 311-413 259-351 (363)
35 cd03805 GT1_ALG2_like This fam 88.5 2.7 5.8E-05 42.6 9.5 96 310-414 290-386 (392)
36 cd04949 GT1_gtfA_like This fam 88.1 0.73 1.6E-05 46.5 5.0 94 311-413 270-365 (372)
37 PF13524 Glyco_trans_1_2: Glyc 88.1 0.98 2.1E-05 36.4 4.9 80 323-413 2-83 (92)
38 cd03792 GT1_Trehalose_phosphor 87.6 2.5 5.5E-05 42.8 8.7 92 310-414 264-359 (372)
39 cd03825 GT1_wcfI_like This fam 87.0 15 0.00032 36.3 13.6 91 310-408 255-345 (365)
40 cd03817 GT1_UGDG_like This fam 86.4 3.8 8.2E-05 40.0 8.9 91 310-411 269-361 (374)
41 TIGR02095 glgA glycogen/starch 86.4 3.8 8.2E-05 43.4 9.5 93 312-414 358-460 (473)
42 PRK09922 UDP-D-galactose:(gluc 85.4 2.3 5.1E-05 43.0 7.0 40 311-351 249-288 (359)
43 cd03802 GT1_AviGT4_like This f 85.2 2.1 4.5E-05 42.0 6.4 41 311-353 235-277 (335)
44 PLN02949 transferase, transfer 85.2 2.7 5.8E-05 44.9 7.6 100 310-414 345-444 (463)
45 PRK14098 glycogen synthase; Pr 84.5 3.2 6.9E-05 44.6 7.9 90 311-414 373-473 (489)
46 cd03795 GT1_like_4 This family 84.1 6.5 0.00014 38.7 9.4 96 310-413 254-353 (357)
47 cd03799 GT1_amsK_like This is 83.9 9.1 0.0002 37.6 10.4 97 310-414 246-349 (355)
48 PRK00654 glgA glycogen synthas 83.2 7 0.00015 41.4 9.7 90 313-413 350-449 (466)
49 TIGR03087 stp1 sugar transfera 82.0 2.7 5.9E-05 43.2 6.0 92 312-414 290-384 (397)
50 cd03813 GT1_like_3 This family 81.8 3.5 7.5E-05 43.9 6.8 96 310-412 361-462 (475)
51 cd03811 GT1_WabH_like This fam 81.7 12 0.00026 35.8 10.1 86 311-402 255-341 (353)
52 KOG2619 Fucosyltransferase [Ca 81.2 5.5 0.00012 41.3 7.7 125 261-398 193-322 (372)
53 PRK10307 putative glycosyl tra 81.2 7.2 0.00016 40.2 8.8 94 310-415 294-396 (412)
54 PHA01630 putative group 1 glyc 80.9 3.1 6.8E-05 42.3 5.8 41 311-352 201-241 (331)
55 TIGR02472 sucr_P_syn_N sucrose 78.0 3.7 8E-05 43.1 5.5 94 311-414 328-428 (439)
56 cd03796 GT1_PIG-A_like This fa 77.9 9.9 0.00021 39.1 8.5 97 310-417 260-358 (398)
57 cd03793 GT1_Glycogen_synthase_ 75.9 3.1 6.7E-05 45.6 4.2 115 310-429 465-589 (590)
58 cd03791 GT1_Glycogen_synthase_ 75.8 14 0.00031 38.8 9.2 41 312-352 363-403 (476)
59 cd04946 GT1_AmsK_like This fam 75.7 20 0.00044 37.2 10.2 90 311-411 300-396 (407)
60 TIGR02918 accessory Sec system 73.9 27 0.00058 37.7 10.8 91 312-413 385-486 (500)
61 PRK14099 glycogen synthase; Pr 73.7 5.5 0.00012 42.7 5.5 91 311-415 360-467 (485)
62 cd03812 GT1_CapH_like This fam 71.7 22 0.00048 35.0 9.0 42 310-352 257-298 (358)
63 PLN02939 transferase, transfer 68.7 46 0.001 38.8 11.5 95 314-415 851-955 (977)
64 smart00672 CAP10 Putative lipo 66.1 65 0.0014 31.6 10.7 164 231-409 40-230 (256)
65 cd01635 Glycosyltransferase_GT 65.5 28 0.0006 31.3 7.6 41 311-352 173-213 (229)
66 PRK15490 Vi polysaccharide bio 59.1 26 0.00056 38.5 7.0 41 311-352 464-504 (578)
67 TIGR02468 sucrsPsyn_pln sucros 58.4 29 0.00063 40.9 7.6 90 312-414 560-658 (1050)
68 PLN02275 transferase, transfer 57.9 34 0.00073 35.0 7.4 75 265-352 261-341 (371)
69 PHA01633 putative glycosyl tra 54.4 14 0.00029 37.9 3.7 43 310-353 214-256 (335)
70 KOG1387 Glycosyltransferase [C 54.0 83 0.0018 32.7 9.1 95 311-411 348-443 (465)
71 PRK13608 diacylglycerol glucos 52.7 27 0.00058 36.1 5.7 87 312-409 266-354 (391)
72 cd03788 GT1_TPS Trehalose-6-Ph 51.3 15 0.00031 39.2 3.5 91 310-410 351-445 (460)
73 COG1819 Glycosyl transferases, 48.1 1.7E+02 0.0037 30.6 10.9 153 236-406 213-380 (406)
74 PRK00726 murG undecaprenyldiph 46.8 84 0.0018 31.5 8.2 107 311-434 244-354 (357)
75 PLN00142 sucrose synthase 46.4 65 0.0014 37.1 7.8 95 313-415 659-759 (815)
76 PF05686 Glyco_transf_90: Glyc 45.5 1.5E+02 0.0033 31.0 9.9 121 228-352 112-246 (395)
77 PRK05749 3-deoxy-D-manno-octul 45.1 33 0.00072 35.5 5.0 107 311-434 311-420 (425)
78 PF00919 UPF0004: Uncharacteri 44.7 16 0.00034 30.6 2.0 31 114-145 11-42 (98)
79 PF13692 Glyco_trans_1_4: Glyc 43.5 22 0.00049 29.9 2.9 70 264-352 33-103 (135)
80 TIGR02400 trehalose_OtsA alpha 40.2 73 0.0016 34.0 6.7 86 310-406 346-436 (456)
81 PRK15179 Vi polysaccharide bio 36.0 1.4E+02 0.003 33.8 8.3 40 312-352 584-623 (694)
82 cd04950 GT1_like_1 Glycosyltra 35.5 45 0.00097 34.0 4.1 40 311-351 265-309 (373)
83 PLN02316 synthase/transferase 35.4 47 0.001 39.2 4.6 38 315-352 915-952 (1036)
84 TIGR02470 sucr_synth sucrose s 34.8 1.2E+02 0.0026 34.8 7.6 89 321-417 645-738 (784)
85 PHA03392 egt ecdysteroid UDP-g 31.8 1.2E+02 0.0027 32.8 6.9 157 255-427 287-461 (507)
86 cd03784 GT1_Gtf_like This fami 28.3 1.9E+02 0.0041 29.5 7.3 89 311-407 296-385 (401)
87 PLN02605 monogalactosyldiacylg 28.2 5.2E+02 0.011 26.3 10.6 85 312-406 275-361 (382)
88 PRK00025 lpxB lipid-A-disaccha 28.1 77 0.0017 32.0 4.4 36 312-353 254-289 (380)
89 TIGR03590 PseG pseudaminic aci 25.0 1.3E+02 0.0028 29.6 5.2 36 310-351 232-267 (279)
90 PRK10125 putative glycosyl tra 23.9 2.1E+02 0.0045 29.9 6.7 61 311-380 298-360 (405)
91 TIGR00236 wecB UDP-N-acetylglu 23.5 5.8E+02 0.012 25.6 9.8 60 279-351 241-300 (365)
92 KOG3185 Translation initiation 22.0 58 0.0013 30.8 1.9 32 319-350 20-51 (245)
93 PLN03063 alpha,alpha-trehalose 20.5 2.5E+02 0.0053 32.4 6.9 88 311-407 367-458 (797)
94 PHA02756 hypothetical protein; 20.4 1.5E+02 0.0034 26.0 4.0 51 10-60 10-68 (164)
95 PLN02208 glycosyltransferase f 20.3 1.4E+02 0.003 31.8 4.6 86 334-431 340-437 (442)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=5.8e-71 Score=579.67 Aligned_cols=377 Identities=35% Similarity=0.616 Sum_probs=335.5
Q ss_pred CCCceEeecCCchhhhHHHHHhccccc-cccCCCCccccccCCCCCCCcCCCCC---CccCCCcccccccccchHHHHHh
Q 045731 51 CLGRYIYIHDLPKQFNEDVLENCQLIT-RKIDKYDTCMYTLNSGFGPRIENSNG---ILSNSTSWFITDHFFLEVIFHNR 126 (444)
Q Consensus 51 c~~~~vyvYdLP~~Fn~~ll~~c~~~~-~~~~~~~~C~~~~n~G~g~~~~~~~~---~~~~~~~w~~t~qy~~E~~fh~r 126 (444)
|.+.+||||++|+.||.++++.|.... .|..+..+|.+..|+++++......+ .... ++|+.|+||++|.+||++
T Consensus 70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~~~E~~~~~~ 148 (464)
T KOG1021|consen 70 CAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHT-PSWCLTDQYASEGIFHNR 148 (464)
T ss_pred ccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccC-CCcccccchhHHHHHHHH
Confidence 999999999999999999999998775 45443349999999999987755433 2223 789999999999999999
Q ss_pred h--ccCccccCCCCCccEEEEeccccccchhcccCCC----CccchhHHHHHHHHHhcCccccccCCCCeEEEecCCCcc
Q 045731 127 M--KNYECLTNDSSLASAIYVPFYAGLDLRRHLWGFK----PSVRDSSGKNLIKWLLEKPEWEKMRGLDHFLVSGRPSLD 200 (444)
Q Consensus 127 l--~~s~~rT~dPeeAd~FyVP~y~~l~~~~~~~~~~----~~~~~~~~~~l~~~L~~~P~W~R~~GrDHf~v~~~~~wd 200 (444)
| ..++|||.||++||+||||||++++..+++..++ ...++.++..++.|+++||||||++|+|||||++|+.|+
T Consensus 149 ~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~ 228 (464)
T KOG1021|consen 149 MLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGD 228 (464)
T ss_pred HhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchh
Confidence 9 5789999999999999999999999988754442 234677888999999999999999999999999999998
Q ss_pred ccccCCCCcCcccCCChhcccceeEeeecCCCCCCcccCCCCccCCCCCchhhHHHhhhcccCCceEEEEeeecccCCcc
Q 045731 201 FRRQSNSKWGSMFRILPESQNMTMLSVDSQSWSNDLAIPYPTYFHPSKQTEVSEWQERMRRLKREYLFCFVGATRNYGGS 280 (444)
Q Consensus 201 fr~~~~~~wG~~~~~~p~~~n~~~l~~e~~~~~~DvviPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~F~G~~~~~~~~ 280 (444)
+++. .+||.....++++.|.+.+..+..+|.+|++|||++.+||....+. .|+..++..+|++|++|+|+. .++.
T Consensus 229 ~~~~--~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~--~~~~ 303 (464)
T KOG1021|consen 229 FRRR--SDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP--AGGQ 303 (464)
T ss_pred eeec--cchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc--cCCc
Confidence 8765 6799888889999998889999999999999999999999998877 899888889999999999984 3899
Q ss_pred hHHHHHHhhcc-CCCeeeeecCCCCccCCCchhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCcccccc
Q 045731 281 IRGSIIGQCKD-SSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYK 359 (444)
Q Consensus 281 iR~~L~~~~~~-~~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~ 359 (444)
||+.|+++|++ .+.+.+++|..|...|.++.+|++.|++|+|||||+||+++|+|+||||++|||||||+|+ .||+
T Consensus 304 iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~~lp 380 (464)
T KOG1021|consen 304 IRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---IQLP 380 (464)
T ss_pred HHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---cccC
Confidence 99999999999 4557888998888889999999999999999999999999999999999999999999999 4788
Q ss_pred ccCCCCCCceEEEeeccccchhhhhHHHHHcCCChHHHHHHHHHHHh-hccceeecC--CCCCcCcHHHHHHHHHHHHHH
Q 045731 360 WHLPKNHTKYSVFIPEKKLRDRRFRINETLLGVSKVEEEAMREEVIR-LIPRTVYGD--HKSKLEDAFDLAVKGVLERVE 436 (444)
Q Consensus 360 w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~~I~~~~i~~Mr~~l~~-v~~~~~Y~~--p~~~~~DAf~~~l~~l~~R~~ 436 (444)
|+.|.||++|||+|++++++++ |.++|.+|+++++.+||+++++ +.++|.+.. |... +|||++++++|+.|+.
T Consensus 381 f~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~-~da~~~~~~~v~~r~~ 456 (464)
T KOG1021|consen 381 FGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKR-GDAFHMILHSLWRRLH 456 (464)
T ss_pred cCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCc-chhHHHHHhhhhhccc
Confidence 8888999999999999999994 5999999999999999999995 888888877 4444 9999999999999999
Q ss_pred Hhhh
Q 045731 437 KLRG 440 (444)
Q Consensus 437 ~~r~ 440 (444)
.++.
T Consensus 457 ~~~~ 460 (464)
T KOG1021|consen 457 KLRS 460 (464)
T ss_pred cccc
Confidence 8774
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=5.1e-54 Score=425.78 Aligned_cols=283 Identities=31% Similarity=0.594 Sum_probs=217.9
Q ss_pred CCCCceEeecCCchhhhHHHHHhccccccccCCCCccccccCCCCCCCcCCCCCCccCCCcccccccccchHHHHHhhcc
Q 045731 50 ACLGRYIYIHDLPKQFNEDVLENCQLITRKIDKYDTCMYTLNSGFGPRIENSNGILSNSTSWFITDHFFLEVIFHNRMKN 129 (444)
Q Consensus 50 ~c~~~~vyvYdLP~~Fn~~ll~~c~~~~~~~~~~~~C~~~~n~G~g~~~~~~~~~~~~~~~w~~t~qy~~E~~fh~rl~~ 129 (444)
+|.+++|||||||++||.+++..... .. ..|..++||++|.+||++|++
T Consensus 1 ~~~~lkVYVY~lp~~~~~~~~~~~~~------------------------------~~-~~~~~~~~~~~e~~l~~~l~~ 49 (302)
T PF03016_consen 1 SHRGLKVYVYPLPPKFNKDLLDPRED------------------------------EQ-CSWYETSQYALEVILHEALLN 49 (302)
T ss_pred CCCCCEEEEEeCCccccccceecccc------------------------------cc-CCCcccccchHHHHHHHHHHh
Confidence 58899999999999999999832110 01 456678999999999999999
Q ss_pred CccccCCCCCccEEEEeccccccchhcccCCCC--ccchhHHHHHHHHHhcCccccccCCCCeEEEecCCCccccccCCC
Q 045731 130 YECLTNDSSLASAIYVPFYAGLDLRRHLWGFKP--SVRDSSGKNLIKWLLEKPEWEKMRGLDHFLVSGRPSLDFRRQSNS 207 (444)
Q Consensus 130 s~~rT~dPeeAd~FyVP~y~~l~~~~~~~~~~~--~~~~~~~~~l~~~L~~~P~W~R~~GrDHf~v~~~~~wdfr~~~~~ 207 (444)
|+++|.||+|||+||||++.++.. .+.|+.+. ...+.+...+..++.++|||||++|+||||+.+++
T Consensus 50 s~~~T~dp~eAdlF~vP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~---------- 118 (302)
T PF03016_consen 50 SPFRTDDPEEADLFFVPFYSSCYF-HHWWGSPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHD---------- 118 (302)
T ss_pred CCcEeCCHHHCeEEEEEccccccc-ccccCCccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccc----------
Confidence 999999999999999999998764 22222221 23455666778888899999999999999999954
Q ss_pred CcCcc-cCCChhcccceeEee-e-----cCCCC--CCcccCCCCccCCCCCchhhHHHhhhcccCCceEEEEeeecc-c-
Q 045731 208 KWGSM-FRILPESQNMTMLSV-D-----SQSWS--NDLAIPYPTYFHPSKQTEVSEWQERMRRLKREYLFCFVGATR-N- 276 (444)
Q Consensus 208 ~wG~~-~~~~p~~~n~~~l~~-e-----~~~~~--~DvviPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~F~G~~~-~- 276 (444)
||.+ ....+.+.+.+..++ . ...+. +||++|+....++... ...+ ......+|++|++|+|+.+ .
T Consensus 119 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~--~~~~-~~~~~~~R~~l~~f~g~~~~~~ 194 (302)
T PF03016_consen 119 -RGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPD--WRPW-PQRPPARRPYLLFFAGTIRPSS 194 (302)
T ss_pred -cccccccccHhhhccchhheeccCCCCcCcccCCCCeeccccccccccCC--cccc-ccCCccCCceEEEEeeeccccc
Confidence 4433 334445555544444 1 12232 8999998543222111 1111 2234689999999999987 3
Q ss_pred --CCcchHHHHHHhhccCCCeeeeecCCCCccCCCchhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCc
Q 045731 277 --YGGSIRGSIIGQCKDSSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSA 354 (444)
Q Consensus 277 --~~~~iR~~L~~~~~~~~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~a 354 (444)
.++.+|+.|++.|.+.++..+.. +...+.++.+|.+.|++|+|||+|+|+++++.|++|||++|||||||+|+
T Consensus 195 ~~~~~~~r~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~-- 269 (302)
T PF03016_consen 195 NDYSGGVRQRLLDECKSDPDFRCSD---GSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDD-- 269 (302)
T ss_pred cccchhhhhHHHHhcccCCcceeee---cccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCc--
Confidence 34689999999999887654432 22355677889999999999999999999999999999999999999998
Q ss_pred cccccccCCC----CCCceEEEeeccccchhhhhHHHHHcCC
Q 045731 355 YTQYKWHLPK----NHTKYSVFIPEKKLRDRRFRINETLLGV 392 (444)
Q Consensus 355 y~qy~w~LPf----d~~~fsV~I~e~dv~~~~~~i~~iL~~I 392 (444)
++||| ||++|||+|+++++++ |+++|++|
T Consensus 270 -----~~lPf~~~ldw~~fsv~v~~~~~~~----l~~iL~~i 302 (302)
T PF03016_consen 270 -----YVLPFEDVLDWSRFSVRVPEADLPE----LPEILRSI 302 (302)
T ss_pred -----ccCCcccccCHHHEEEEECHHHHHH----HHHHHhcC
Confidence 68999 9999999999999999 99999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.90 E-value=1.9e-23 Score=213.88 Aligned_cols=331 Identities=19% Similarity=0.275 Sum_probs=219.4
Q ss_pred CCceEeecCCchhhhH-HHHHhccccccccCCCCccccccCCCCCCCcCCCCCCccC--CCcccccccccchHHHHHhhc
Q 045731 52 LGRYIYIHDLPKQFNE-DVLENCQLITRKIDKYDTCMYTLNSGFGPRIENSNGILSN--STSWFITDHFFLEVIFHNRMK 128 (444)
Q Consensus 52 ~~~~vyvYdLP~~Fn~-~ll~~c~~~~~~~~~~~~C~~~~n~G~g~~~~~~~~~~~~--~~~w~~t~qy~~E~~fh~rl~ 128 (444)
.+....--.+|++.+. .+...|+..++..++ +|+.++ ||+.++.+....... .++| +-..|.+-+.
T Consensus 157 LP~sllP~~~pr~l~pp~~~~~c~lhncfdyS--RCsltS--gfPVYvyd~D~~~~G~~~d~~-------lk~~fq~t~~ 225 (907)
T KOG2264|consen 157 LPFSLLPLQIPRELEPPSQISPCQLHNCFDYS--RCSLTS--GFPVYVYDSDIITSGQSEDEW-------LKQVFQETIP 225 (907)
T ss_pred eccccCcccCcccCCCccccCcccchhccccc--cccccC--CceeEEeccceeecccchHHH-------HHHHHHHhcc
Confidence 3444444455555543 356779888998886 999886 888877543211100 1333 2246778788
Q ss_pred cCccccCCCCCccEEEEeccccccchhcccCCCCccchhHHHHHHHHHhcCccccccCCCCeEEEec-CCCccccccCCC
Q 045731 129 NYECLTNDSSLASAIYVPFYAGLDLRRHLWGFKPSVRDSSGKNLIKWLLEKPEWEKMRGLDHFLVSG-RPSLDFRRQSNS 207 (444)
Q Consensus 129 ~s~~rT~dPeeAd~FyVP~y~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~P~W~R~~GrDHf~v~~-~~~wdfr~~~~~ 207 (444)
...+.|.||+.||++.+-.- .+ ..|..... .+ ++-|-+.|+| |++|+||+++.. ++ +
T Consensus 226 ~n~~~ve~pd~ACiyi~lvg-e~------q~P~~l~p----~e-leklyslp~w-~~dg~Nhvl~Nl~r~---------s 283 (907)
T KOG2264|consen 226 NNVYLVETPDKACIYIHLVG-EI------QSPVVLTP----AE-LEKLYSLPHW-RTDGFNHVLFNLGRP---------S 283 (907)
T ss_pred cceeEeeCCCccEEEEEEec-cc------cCCCcCCh----Hh-hhhhhcCccc-cCCCcceEEEEccCc---------c
Confidence 88899999999999766443 21 11211111 12 2337788999 899999999985 22 2
Q ss_pred CcCcccCCChhcccceeEee-ecCCCC--CCcccCCCCccCCCCCchhhHHHh--hhcccCCceEEEEeeecc-cC--Cc
Q 045731 208 KWGSMFRILPESQNMTMLSV-DSQSWS--NDLAIPYPTYFHPSKQTEVSEWQE--RMRRLKREYLFCFVGATR-NY--GG 279 (444)
Q Consensus 208 ~wG~~~~~~p~~~n~~~l~~-e~~~~~--~DvviPy~t~fhP~~~~~~~~w~~--~~~~~~R~~L~~F~G~~~-~~--~~ 279 (444)
|-.+.+.....++.+.+... +....+ .|+++|.. .|+... ..|++ .+.+.+|++|+.|+|.++ .. -.
T Consensus 284 ~~~n~lyn~~t~raivvQssf~~~q~RpgfDl~V~pv--~h~~~e---~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn 358 (907)
T KOG2264|consen 284 DTQNLLYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPV--NHIAVE---KNFVELTPLVPFQRKYLITLQGKIESDNSSLN 358 (907)
T ss_pred ccccceeEeccCceEEEeecceeeeeccCCCcccCcc--cccccC---ccceecCcccchhhheeEEEEeeecccccccc
Confidence 33232222222222222211 222333 88888754 355443 23443 345789999999999887 21 12
Q ss_pred chHHHHHHhhccC-------CCeeeeecCC-----------CCccCCCchhHHHhcccCeeEec-CCCCCCCc-----ch
Q 045731 280 SIRGSIIGQCKDS-------SSCKLLDCGD-----------KTTNCYNPVNVMKAFESSVFCLQ-PPGDTPTR-----RS 335 (444)
Q Consensus 280 ~iR~~L~~~~~~~-------~~~~~~~c~~-----------~~~~c~~~~~y~~~m~~S~FCL~-P~Gds~ts-----~r 335 (444)
..+.-..+...+- ..+..+.|.. ...-|...+.-.+++.+|+|||+ |+||.--. .|
T Consensus 359 ~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r 438 (907)
T KOG2264|consen 359 EFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQR 438 (907)
T ss_pred hhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHH
Confidence 3444333332221 1234455541 12345566788899999999996 88987432 68
Q ss_pred HHHHHhhCceeEEeeCCCccccccccCCC----CCCceEEEeeccccchhhhhHHHHHcCCChHHHHHHHHHHHhhccce
Q 045731 336 TFDSILAGCIPVFFHPGSAYTQYKWHLPK----NHTKYSVFIPEKKLRDRRFRINETLLGVSKVEEEAMREEVIRLIPRT 411 (444)
Q Consensus 336 lfDai~aGCIPVi~~d~~ay~qy~w~LPf----d~~~fsV~I~e~dv~~~~~~i~~iL~~I~~~~i~~Mr~~l~~v~~~~ 411 (444)
+++|+..||||||+++.. .||| ||.+.+..+|...+.+ ++-+|+++...++.+||+++ ++
T Consensus 439 ~~eaL~~GavPviLg~~~-------~LPyqd~idWrraal~lPkaR~tE----~HFllrs~~dsDll~mRRqG-----Rl 502 (907)
T KOG2264|consen 439 FLEALQLGAVPVILGNSQ-------LLPYQDLIDWRRAALRLPKARLTE----AHFLLRSFEDSDLLEMRRQG-----RL 502 (907)
T ss_pred HHHHHhcCCeeEEecccc-------ccchHHHHHHHHHhhhCCccccch----HHHHHHhcchhhHHHHHhhh-----hh
Confidence 999999999999999885 7998 8999999999999999 99999999999999999998 77
Q ss_pred eecCCCCCcCcHHHHHHHHHHHHHH
Q 045731 412 VYGDHKSKLEDAFDLAVKGVLERVE 436 (444)
Q Consensus 412 ~Y~~p~~~~~DAf~~~l~~l~~R~~ 436 (444)
.|...-+...-.+++++..|..|+.
T Consensus 503 ~wEtYls~~~~~~~tvlA~lR~rlq 527 (907)
T KOG2264|consen 503 FWETYLSDRHLLARTVLAALRYRLQ 527 (907)
T ss_pred hHHHHhhHHHHHHHHHHHHHHHhhC
Confidence 8877666546678899999988874
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.10 E-value=7.1e-10 Score=114.70 Aligned_cols=240 Identities=18% Similarity=0.136 Sum_probs=157.3
Q ss_pred HHHhhccCccccCCCCCccEEEEeccccccchhcccCCCCccchhHHHHHHHHHhcCccccccCCCCeEEEecCCCcccc
Q 045731 123 FHNRMKNYECLTNDSSLASAIYVPFYAGLDLRRHLWGFKPSVRDSSGKNLIKWLLEKPEWEKMRGLDHFLVSGRPSLDFR 202 (444)
Q Consensus 123 fh~rl~~s~~rT~dPeeAd~FyVP~y~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~P~W~R~~GrDHf~v~~~~~wdfr 202 (444)
+-+....|.+.|.|+++|++| +|-..-+..+..-| ++. ..-|.+.-.|. .|.+|..+..-|+=+
T Consensus 128 lleA~~~S~yyt~n~N~aclf-~Ps~d~lnQn~l~~--------kl~---~~ala~l~~wd--rg~nH~~fnmLpGg~-- 191 (691)
T KOG1022|consen 128 LLEAWHLSFYYTFNYNGACLF-MPSSDELNQNPLSW--------KLE---KVALAKLLVWD--RGVNHEGFNMLPGGD-- 191 (691)
T ss_pred HHHHHHhccceecCCCceEEE-ecchhhhccCcchH--------HHH---HHHHhcccchh--cccceeeEeeccCCC--
Confidence 345566799999999999996 88776554432212 111 11234556898 799999998766411
Q ss_pred ccCCCCcCcccCCChhcccceeEeeecCCCC----CCcccCCCCccCCCCCchhhHHHhhhcccCCceEEEEeeecccCC
Q 045731 203 RQSNSKWGSMFRILPESQNMTMLSVDSQSWS----NDLAIPYPTYFHPSKQTEVSEWQERMRRLKREYLFCFVGATRNYG 278 (444)
Q Consensus 203 ~~~~~~wG~~~~~~p~~~n~~~l~~e~~~~~----~DvviPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~F~G~~~~~~ 278 (444)
+++ +..+..+.. ++-...-..++|. +||.||--+ |... +. ....+..|.+++--.|- +++
T Consensus 192 ----p~y-ntaldv~~d-~a~~~gggf~tW~yr~g~dv~ipv~S---p~~v-~~----~~~~~g~r~~~l~~~q~--n~~ 255 (691)
T KOG1022|consen 192 ----PTY-NTALDVGQD-EAWYSGGGFGTWKYRKGNDVYIPVRS---PGNV-GR----AFLYDGSRYRVLQDCQE--NYG 255 (691)
T ss_pred ----CCc-cccccCCcc-eeEEecCCcCcccccCCCcccccccc---cccc-Cc----cccCCccceeeeecccc--ccc
Confidence 222 221222111 1111111234664 899998632 3211 00 01123455443332221 567
Q ss_pred cchHHHHHHhhccCCC--eeeeecCCC----CccC--CCchhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEee
Q 045731 279 GSIRGSIIGQCKDSSS--CKLLDCGDK----TTNC--YNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFH 350 (444)
Q Consensus 279 ~~iR~~L~~~~~~~~~--~~~~~c~~~----~~~c--~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~ 350 (444)
..+|..+++...+.+. ..+-.|-+. ...| +..-+|...+...+||+.-+|.+-...-+.+-+.+||||||..
T Consensus 256 pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~v 335 (691)
T KOG1022|consen 256 PRIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISV 335 (691)
T ss_pred hHhHHhHHHHHhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeee
Confidence 7899999888766532 222233221 1233 2345789999999999999888888888999999999999999
Q ss_pred CCCccccccccCCC----CCCceEEEeeccccchhhhhHHHHHcCCChHHHHHHHHHHH
Q 045731 351 PGSAYTQYKWHLPK----NHTKYSVFIPEKKLRDRRFRINETLLGVSKVEEEAMREEVI 405 (444)
Q Consensus 351 d~~ay~qy~w~LPf----d~~~fsV~I~e~dv~~~~~~i~~iL~~I~~~~i~~Mr~~l~ 405 (444)
|. |-||| ||.-.||.++|..+.+ +.+.|++|+...+-+||.+..
T Consensus 336 d~-------y~lpf~~Vvdw~~aSv~~~e~~~~~----v~~~l~~i~~~~i~sl~~r~~ 383 (691)
T KOG1022|consen 336 DI-------YLLPFLGVVDWIVASVWCMEYYAGK----VMDALLNIETAGICSLQLRRI 383 (691)
T ss_pred eh-------hhhhhhhhhhceeeeEEeehhhHHH----HHHHhhcchhcchhhhhhhhh
Confidence 99 68999 9999999999999999 999999999999999987753
No 5
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.88 E-value=0.048 Score=53.66 Aligned_cols=96 Identities=9% Similarity=0.097 Sum_probs=63.1
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..++.+.|..|.+++.|.+.......++|||.+|| |||.++..+.. ++ ..-....+.++..+..+-.-.|.+++
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~~~----~~-i~~~~~g~~~~~~~~~~l~~~i~~l~ 330 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGGPA----DI-VTDGENGLLVEPGDAEAFAAALAALL 330 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCCch----hh-hcCCcceEEcCCCCHHHHHHHHHHHH
Confidence 45678899999999999877666678999999999 88888864211 11 11123455566655543111144444
Q ss_pred cCCChHHHHHHHHHHHhhccceee
Q 045731 390 LGVSKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
. .+++..+|.++..+....+.|
T Consensus 331 ~--~~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 331 A--DPELRRRMAARARAEAERRSW 352 (364)
T ss_pred c--CHHHHHHHHHHHHHHHhhcCH
Confidence 3 467788888888776655554
No 6
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=95.42 E-value=0.023 Score=58.41 Aligned_cols=85 Identities=16% Similarity=0.255 Sum_probs=48.6
Q ss_pred CCceEEEEeeecccCCcchHHHHHHhhccCCCeeee-ecCCCCccCCCchhHHHhcccCeeEecCC---CCCCCcchHHH
Q 045731 263 KREYLFCFVGATRNYGGSIRGSIIGQCKDSSSCKLL-DCGDKTTNCYNPVNVMKAFESSVFCLQPP---GDTPTRRSTFD 338 (444)
Q Consensus 263 ~R~~L~~F~G~~~~~~~~iR~~L~~~~~~~~~~~~~-~c~~~~~~c~~~~~y~~~m~~S~FCL~P~---Gds~ts~rlfD 338 (444)
+++.++.+..+-++ ...-|..+++++.+.-.+... .|..+ .+.......+.+++-+|.|+.- .....+--+|+
T Consensus 173 ~K~~~~~w~~Snc~-~~~~R~~~~~~L~~~~~vd~yG~c~~~--~~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~ 249 (349)
T PF00852_consen 173 KKTKLAAWIVSNCN-PHSGREEYVRELSKYIPVDSYGKCGNN--NPCPRDCKLELLSKYKFYLAFENSNCPDYITEKFWN 249 (349)
T ss_dssp TSSEEEEE--S-S---H-HHHHHHHHHHTTS-EEE-SSTT----SSS--S-HHHHHHTEEEEEEE-SS--TT---HHHHH
T ss_pred CCCceEEEEeeCcC-CcccHHHHHHHHHhhcCeEccCCCCCC--CCcccccccccccCcEEEEEecCCCCCCCCCHHHHH
Confidence 34445544443331 223399999999887444332 33111 1122345889999999999853 45556678999
Q ss_pred HHhhCceeEEee
Q 045731 339 SILAGCIPVFFH 350 (444)
Q Consensus 339 ai~aGCIPVi~~ 350 (444)
|+.+|||||+++
T Consensus 250 al~~g~VPI~~G 261 (349)
T PF00852_consen 250 ALLAGTVPIYWG 261 (349)
T ss_dssp HHHTTSEEEEES
T ss_pred HHHCCeEEEEEC
Confidence 999999999999
No 7
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.30 E-value=0.089 Score=51.68 Aligned_cols=95 Identities=16% Similarity=0.217 Sum_probs=62.0
Q ss_pred chhHHHhcccCeeEecCCCCCCC-----cchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhh
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPT-----RRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFR 384 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~t-----s~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~ 384 (444)
..++.+.|..+.+++.|...+.. ...+.|||.+|| |||.++..... +. ..-.+..+.++.+++.+
T Consensus 285 ~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~----~~-~~~~~~g~~~~~~~~~~---- 354 (394)
T cd03794 285 KEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA----EL-VEEAGAGLVVPPGDPEA---- 354 (394)
T ss_pred hHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch----hh-hccCCcceEeCCCCHHH----
Confidence 35788899999999999765532 456899999997 88888764211 11 11114556666666555
Q ss_pred HHHHHcCC--ChHHHHHHHHHHHhhcc-ceeec
Q 045731 385 INETLLGV--SKVEEEAMREEVIRLIP-RTVYG 414 (444)
Q Consensus 385 i~~iL~~I--~~~~i~~Mr~~l~~v~~-~~~Y~ 414 (444)
+.+.|..+ .+++..+|.++..+... +|.|.
T Consensus 355 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 355 LAAAILELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 44444444 67788888888766544 55543
No 8
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.28 E-value=0.026 Score=50.53 Aligned_cols=86 Identities=9% Similarity=0.179 Sum_probs=52.5
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..++.+.++.|.+.++|.........+.|||.+|| |||.++..... ..+ -+. .-.+.++..++.+ +.+.+
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~~~---e~~-~~~-~~g~~~~~~~~~~----l~~~i 152 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGGNN---EII-NDG-VNGFLFDPNDIEE----LADAI 152 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTHHH---HHS-GTT-TSEEEESTTSHHH----HHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccccCCc---eee-ccc-cceEEeCCCCHHH----HHHHH
Confidence 45788999999999999887777789999999999 66677653110 011 011 1235565556555 44444
Q ss_pred cCCC--hHHHHHHHHHHH
Q 045731 390 LGVS--KVEEEAMREEVI 405 (444)
Q Consensus 390 ~~I~--~~~i~~Mr~~l~ 405 (444)
..+- ++....|.++.+
T Consensus 153 ~~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 153 EKLLNDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHhc
Confidence 4432 355666666654
No 9
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=95.12 E-value=0.11 Score=55.07 Aligned_cols=93 Identities=14% Similarity=0.187 Sum_probs=66.3
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC---C--CCceEEEeeccccchhhhhH
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK---N--HTKYSVFIPEKKLRDRRFRI 385 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf---d--~~~fsV~I~e~dv~~~~~~i 385 (444)
.++.+.|+.+..++.|.........++|||.+| +|||.++.. ..+- + ..+-.+.++..|..+ +
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~g-------g~~eiv~~~~~~~~G~lv~~~d~~~----l 390 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAG-------GIPDIIPPDQEGKTGFLYTPGDVDD----C 390 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCC-------CcHhhhhcCCCCCceEEeCCCCHHH----H
Confidence 578899999999999987666567899999999 899998753 1221 2 245667777666655 4
Q ss_pred HHHHcCC--ChHHHHHHHHHHHhhccceeecC
Q 045731 386 NETLLGV--SKVEEEAMREEVIRLIPRTVYGD 415 (444)
Q Consensus 386 ~~iL~~I--~~~~i~~Mr~~l~~v~~~~~Y~~ 415 (444)
.+.|..+ .++...+|.++..+....|-|..
T Consensus 391 a~~i~~ll~~~~~~~~~~~~a~~~~~~fsw~~ 422 (465)
T PLN02871 391 VEKLETLLADPELRERMGAAAREEVEKWDWRA 422 (465)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4433332 46778889988887766666644
No 10
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=94.87 E-value=0.14 Score=50.38 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=62.2
Q ss_pred hhHHHhcccCeeEecCCCCC--CCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHH
Q 045731 311 VNVMKAFESSVFCLQPPGDT--PTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINET 388 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds--~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~i 388 (444)
.++.+.|+.|.+++.|.... ..+..+.|||.+|+ |||.+|... . +.=.+ ..-.+.++..++.+ +.+.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~-~----~~i~~-~~~g~~~~~~d~~~----~~~~ 327 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH-A----EEVLD-GGTGLLVPPGDPAA----LAEA 327 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC-h----heeee-CCCcEEEcCCCHHH----HHHH
Confidence 46789999999999997766 55678999999999 999988642 0 11011 22345555555544 4444
Q ss_pred HcCC--ChHHHHHHHHHHHhhccceeec
Q 045731 389 LLGV--SKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 389 L~~I--~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
|..+ .+++..+|+++..+....+.|.
T Consensus 328 l~~l~~~~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 328 IRRLLADPELAQALRARAREYARAMSWE 355 (366)
T ss_pred HHHHHcChHHHHHHHHHHHHHHhhCCHH
Confidence 4332 3567888999888777665553
No 11
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=94.67 E-value=0.17 Score=48.90 Aligned_cols=94 Identities=12% Similarity=0.170 Sum_probs=62.0
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..++.+.|..|.+.+.|.-.......++|||.+|| |||.++..... ++ .......+.++..+..+ +.+.|
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~~~~~----~~-~~~~~~g~~~~~~~~~~----l~~~i 335 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIP----EV-VEDGETGLLVPPGDPEA----LAEAI 335 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCCCChh----HH-hcCCcceEEeCCCCHHH----HHHHH
Confidence 46788999999999999765555678999999997 67777653211 11 12245566777766555 55544
Q ss_pred cCC--ChHHHHHHHHHHH-hhccceee
Q 045731 390 LGV--SKVEEEAMREEVI-RLIPRTVY 413 (444)
Q Consensus 390 ~~I--~~~~i~~Mr~~l~-~v~~~~~Y 413 (444)
..+ .++...+|.++.. .+...+.|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 336 LRLLDDPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHhcCH
Confidence 442 4566778888776 45555544
No 12
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=94.49 E-value=0.15 Score=50.27 Aligned_cols=93 Identities=12% Similarity=0.152 Sum_probs=61.3
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..++.+.+..+.+++.|.-.......++|||.+|| |||.++..+ ++---.+..+.++.++..+ +.+.|
T Consensus 263 ~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~-------~~e~~~~~~~~~~~~~~~~----~~~~i 330 (365)
T cd03809 263 DEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS-------LPEVAGDAALYFDPLDPEA----LAAAI 330 (365)
T ss_pred hhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC-------ccceecCceeeeCCCCHHH----HHHHH
Confidence 45678899999999998643333467999999997 777777632 1111133455666666555 44444
Q ss_pred cC-C-ChHHHHHHHHHHHhhccceeec
Q 045731 390 LG-V-SKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 390 ~~-I-~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
.. + .++...+|.++..++...+.|.
T Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 331 ERLLEDPALREELRERGLARAKRFSWE 357 (365)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCCHH
Confidence 44 2 4667788888887777776664
No 13
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=94.03 E-value=0.2 Score=51.42 Aligned_cols=96 Identities=10% Similarity=0.134 Sum_probs=61.4
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINE 387 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~ 387 (444)
..+..+.|+.+..++.|.=.......+.|||.+|| |||.++... .+- .-..-.+.++..|...-.-.|.+
T Consensus 293 ~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~-------~~e~i~~~~~g~~~~~~d~~~la~~i~~ 364 (405)
T TIGR03449 293 PEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG-------LPVAVADGETGLLVDGHDPADWADALAR 364 (405)
T ss_pred HHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC-------cHhhhccCCceEECCCCCHHHHHHHHHH
Confidence 35677899999988888533333467999999996 888887531 221 12234566666665541111444
Q ss_pred HHcCCChHHHHHHHHHHHhhccceeecC
Q 045731 388 TLLGVSKVEEEAMREEVIRLIPRTVYGD 415 (444)
Q Consensus 388 iL~~I~~~~i~~Mr~~l~~v~~~~~Y~~ 415 (444)
+|. .++...+|.++..+...+|.|..
T Consensus 365 ~l~--~~~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 365 LLD--DPRTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred HHh--CHHHHHHHHHHHHHHHHhCCHHH
Confidence 443 46677889888877767666644
No 14
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=94.00 E-value=0.24 Score=48.45 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=56.2
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.+..+.+..+.+++.|.-.......++|||.+|| |||.++..... ++--+ ...+.++.++ .+-.-.|.+++.
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~----~~~~~--~~~~~~~~~~-~~~~~~i~~l~~ 344 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVPWQ----ELIEY--GCGWVVDDDV-DALAAALRRALE 344 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCCHH----HHhhc--CceEEeCCCh-HHHHHHHHHHHh
Confidence 4677889999999999765545577999999996 88888764211 11112 3344444332 220001333333
Q ss_pred CCChHHHHHHHHHHHhh-ccceee
Q 045731 391 GVSKVEEEAMREEVIRL-IPRTVY 413 (444)
Q Consensus 391 ~I~~~~i~~Mr~~l~~v-~~~~~Y 413 (444)
.+++.++|.++..+. ..++.|
T Consensus 345 --~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 345 --LPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred --CHHHHHHHHHHHHHHHHHhcCH
Confidence 236788888887665 566555
No 15
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=93.47 E-value=0.42 Score=48.39 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=58.2
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHHH
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINET 388 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~i 388 (444)
.+..+.|+.|.+++.|.-.......+.|||.+|+ |||.+|.. ..+- .-......++.++..+ +.+.
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~-------g~~e~i~~~~~g~~~~~~d~~~----la~~ 331 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG-------GNPELVQHGVTGALVPPGDAVA----LARA 331 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC-------CcHHHhcCCCceEEeCCCCHHH----HHHH
Confidence 4678889999998888644444567999999996 99998863 2221 2234566677666655 4444
Q ss_pred HcCC--ChHHHHHHHHHHHhh-ccceee
Q 045731 389 LLGV--SKVEEEAMREEVIRL-IPRTVY 413 (444)
Q Consensus 389 L~~I--~~~~i~~Mr~~l~~v-~~~~~Y 413 (444)
|..+ .+++...|.++..+. ..+|-|
T Consensus 332 i~~l~~~~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 332 LQPYVSDPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 4332 355666776666543 355555
No 16
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.27 E-value=0.62 Score=46.53 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=58.6
Q ss_pred chhHHHhcccCeeEecCCCCC------CCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhh
Q 045731 310 PVNVMKAFESSVFCLQPPGDT------PTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRF 383 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds------~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~ 383 (444)
..+..+.+..|...+.|.-.+ .....++|||.+|| |||.+|..... ++ ..-.+..+.++..++.+
T Consensus 255 ~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~~----e~-i~~~~~g~~~~~~d~~~--- 325 (367)
T cd05844 255 HAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGIP----EA-VEDGETGLLVPEGDVAA--- 325 (367)
T ss_pred HHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCch----hh-eecCCeeEEECCCCHHH---
Confidence 356778899999888875211 12357999999996 99998874211 00 12234566777666655
Q ss_pred hHHHHHcCC--ChHHHHHHHHHHHh-hccceeec
Q 045731 384 RINETLLGV--SKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 384 ~i~~iL~~I--~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
+.+.|..+ .++...+|.++..+ +..+|.|.
T Consensus 326 -l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 326 -LAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred -HHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 44444332 35667788877655 34566553
No 17
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=93.12 E-value=0.41 Score=47.40 Aligned_cols=94 Identities=10% Similarity=0.117 Sum_probs=54.6
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.+..+.|..+.+.+.|.........++|||.+|| |||.+|..... ++--+ -...++.+++.+-.-.|.++|+
T Consensus 254 ~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~----e~i~~---~g~~~~~~~~~~~~~~i~~ll~ 325 (360)
T cd04951 254 DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGVR----EVVGD---SGLIVPISDPEALANKIDEILK 325 (360)
T ss_pred ccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCChh----hEecC---CceEeCCCCHHHHHHHHHHHHh
Confidence 4567889999999998765555578999999999 88888763211 11112 2344455555441111333332
Q ss_pred CCChHHHHHHHHHHHhhccceee
Q 045731 391 GVSKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 391 ~I~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
.+++....|.++-..+...|-|
T Consensus 326 -~~~~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 326 -MSGEERDIIGARRERIVKKFSI 347 (360)
T ss_pred -CCHHHHHHHHHHHHHHHHhcCH
Confidence 3555566666553335455544
No 18
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=93.08 E-value=0.12 Score=52.19 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=60.8
Q ss_pred chhHHHhcccCeeEecCCCCC-----------CCcchHHHHHhhCceeEEeeCCCccccccccCC-C-CCCceEEEeecc
Q 045731 310 PVNVMKAFESSVFCLQPPGDT-----------PTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLP-K-NHTKYSVFIPEK 376 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds-----------~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LP-f-d~~~fsV~I~e~ 376 (444)
+.+..+.++. .|+|++.+++ .....++++|.+| +|||.++..+ ++ + .-...-+.++
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~-------~~~~V~~~~~G~~v~-- 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAA-------IADFIVENGLGFVVD-- 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCcc-------HHHHHHhCCceEEeC--
Confidence 4455666665 8999887761 1123488888887 5999998753 22 1 1233444454
Q ss_pred ccchhhhhHHHHHcCCChHHHHHHHHHHHhhcccee
Q 045731 377 KLRDRRFRINETLLGVSKVEEEAMREEVIRLIPRTV 412 (444)
Q Consensus 377 dv~~~~~~i~~iL~~I~~~~i~~Mr~~l~~v~~~~~ 412 (444)
++.+ +.+.|.+++++++.+|+++.+++.+.+.
T Consensus 286 ~~~e----l~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 286 SLEE----LPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred CHHH----HHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 4445 8888888999999999999998887764
No 19
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=92.80 E-value=0.75 Score=44.28 Aligned_cols=94 Identities=9% Similarity=0.061 Sum_probs=60.8
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.+..+.|+++.+++.|.........++|||.+||.+ |.++.... ..++ .+-....+.++..++.+ +.+.+.
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pv-i~~~~~~~---~~~~-~~~~~~g~~~~~~~~~~----~~~~i~ 314 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV-ISFDCPTG---PSEI-IEDGVNGLLVPNGDVEA----LAEALL 314 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCE-EEecCCCc---hHhh-hccCcceEEeCCCCHHH----HHHHHH
Confidence 578899999999999975554457799999999865 55553210 0111 12223556666666555 444444
Q ss_pred CC--ChHHHHHHHHHHHhhccceee
Q 045731 391 GV--SKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 391 ~I--~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
.+ .++...+|.++..+....|-|
T Consensus 315 ~ll~~~~~~~~~~~~~~~~~~~~~~ 339 (348)
T cd03820 315 RLMEDEELRKRMGANARESAERFSI 339 (348)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhCH
Confidence 33 577788888888777666554
No 20
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=92.78 E-value=0.85 Score=44.54 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=55.8
Q ss_pred hhHHHhcccCeeEecCCC-CCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 311 VNVMKAFESSVFCLQPPG-DTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~G-ds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
.++.+.++.+..++.|.- .......++|||.+| +|||.++..... ++ .+.....+.++..|+.+-.-.|.+++
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~~~~----e~-i~~~~~g~~~~~~d~~~l~~~i~~l~ 327 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIGGMA----EL-VRDGVNGLLFPPGDAEDLAAALERLI 327 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCCCHH----HH-hcCCCcEEEECCCCHHHHHHHHHHHH
Confidence 678889999999999963 233446799999999 678887753210 11 12233466677766544111144444
Q ss_pred cCCChHHHHHHHHHHHhh
Q 045731 390 LGVSKVEEEAMREEVIRL 407 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v 407 (444)
+ .++...+|+++..+.
T Consensus 328 ~--~~~~~~~~~~~~~~~ 343 (359)
T cd03823 328 D--DPDLLERLRAGIEPP 343 (359)
T ss_pred h--ChHHHHHHHHhHHHh
Confidence 3 567788888776543
No 21
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=92.76 E-value=0.72 Score=47.44 Aligned_cols=132 Identities=11% Similarity=0.077 Sum_probs=75.6
Q ss_pred ceEEEEeeecc-c------CCcchHHHHHHhhcc---CCCeeeeecCCCCccCCCchhHHHhcccCeeEecCCCCCCCcc
Q 045731 265 EYLFCFVGATR-N------YGGSIRGSIIGQCKD---SSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPGDTPTRR 334 (444)
Q Consensus 265 ~~L~~F~G~~~-~------~~~~iR~~L~~~~~~---~~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~Gds~ts~ 334 (444)
++-+.+.|... . .+...++.++++... .+.+.++. . ....++.+.|+.|..++.|.-......
T Consensus 243 ~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G------~-v~~~~~~~~l~~adv~v~~s~~e~~~~ 315 (396)
T cd03818 243 DARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLG------R-VPYDQYLALLQVSDVHVYLTYPFVLSW 315 (396)
T ss_pred CcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeC------C-CCHHHHHHHHHhCcEEEEcCcccccch
Confidence 46677777521 1 112256666666543 23444432 1 124577889999998888764443345
Q ss_pred hHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHHHHcCCChHHHHHHHHHHHhhc-cce
Q 045731 335 STFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINETLLGVSKVEEEAMREEVIRLI-PRT 411 (444)
Q Consensus 335 rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~iL~~I~~~~i~~Mr~~l~~v~-~~~ 411 (444)
.++|||.+|| |||.++.. ..+- .-..-.+.++..|...=.-.|.++|. .+++..+|.++.++.. .+|
T Consensus 316 ~llEAmA~G~-PVIas~~~-------g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~l~~~ar~~~~~~f 385 (396)
T cd03818 316 SLLEAMACGC-LVVGSDTA-------PVREVITDGENGLLVDFFDPDALAAAVIELLD--DPARRARLRRAARRTALRYD 385 (396)
T ss_pred HHHHHHHCCC-CEEEcCCC-------CchhhcccCCceEEcCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhc
Confidence 7999999999 88888753 1221 22234556666554441111444454 3567788888776543 335
Q ss_pred ee
Q 045731 412 VY 413 (444)
Q Consensus 412 ~Y 413 (444)
.|
T Consensus 386 s~ 387 (396)
T cd03818 386 LL 387 (396)
T ss_pred cH
Confidence 54
No 22
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=92.61 E-value=0.25 Score=47.86 Aligned_cols=93 Identities=9% Similarity=0.065 Sum_probs=58.3
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..+..+.++.|.+++.|.........++|||.+|| |||.++..... ++ ..-....+.++.++..+ +.+.+
T Consensus 254 ~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~~----~~-i~~~~~g~~~~~~~~~~----~~~~i 323 (359)
T cd03808 254 RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGCR----EA-VIDGVNGFLVPPGDAEA----LADAI 323 (359)
T ss_pred cccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCch----hh-hhcCcceEEECCCCHHH----HHHHH
Confidence 44677899999999999766555678999999995 78888763211 11 11133456666665554 33333
Q ss_pred cCC--ChHHHHHHHHHHHhh-cccee
Q 045731 390 LGV--SKVEEEAMREEVIRL-IPRTV 412 (444)
Q Consensus 390 ~~I--~~~~i~~Mr~~l~~v-~~~~~ 412 (444)
..+ .++...+|.++..+. ..++-
T Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 324 ERLIEDPELRARMGQAARKRAEEEFD 349 (359)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 332 356677777776554 44443
No 23
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=92.55 E-value=1.1 Score=46.63 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=61.2
Q ss_pred chhHHHhcccCeeEecCCC-------CCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccch
Q 045731 310 PVNVMKAFESSVFCLQPPG-------DTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRD 380 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~G-------ds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~ 380 (444)
..+..+.++.+..++.|.= ++. ...+.|||.+|+ |||.++.. -.|- .-..-.+.++..|..+
T Consensus 289 ~~el~~~l~~aDv~v~pS~~~~~g~~Eg~-p~~llEAma~G~-PVI~t~~~-------g~~E~v~~~~~G~lv~~~d~~~ 359 (406)
T PRK15427 289 SHEVKAMLDDADVFLLPSVTGADGDMEGI-PVALMEAMAVGI-PVVSTLHS-------GIPELVEADKSGWLVPENDAQA 359 (406)
T ss_pred HHHHHHHHHhCCEEEECCccCCCCCccCc-cHHHHHHHhCCC-CEEEeCCC-------CchhhhcCCCceEEeCCCCHHH
Confidence 4567899999999999852 333 356999999995 99998764 2332 2234456777777665
Q ss_pred hhhhHHHHHcCC---ChHHHHHHHHHHHh-hccceee
Q 045731 381 RRFRINETLLGV---SKVEEEAMREEVIR-LIPRTVY 413 (444)
Q Consensus 381 ~~~~i~~iL~~I---~~~~i~~Mr~~l~~-v~~~~~Y 413 (444)
+.+.|..+ ++++..+|.++.++ +..+|-|
T Consensus 360 ----la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 360 ----LAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred ----HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 54444433 56778888888765 4455554
No 24
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.55 E-value=0.45 Score=47.63 Aligned_cols=93 Identities=11% Similarity=0.101 Sum_probs=58.8
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHHH
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINET 388 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~i 388 (444)
.+..+.|+.+..++.|.-.......+.|||.+| +|||.++.. ..+- .-..-...++..++.+-.-.|.++
T Consensus 262 ~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~-------~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l 333 (371)
T cd04962 262 DHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAG-------GIPEVVKHGETGFLVDVGDVEAMAEYALSL 333 (371)
T ss_pred ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCC-------CchhhhcCCCceEEcCCCCHHHHHHHHHHH
Confidence 367889999999999964444456799999999 788888764 1221 111223455655555411113333
Q ss_pred HcCCChHHHHHHHHHHHhh-ccceee
Q 045731 389 LLGVSKVEEEAMREEVIRL-IPRTVY 413 (444)
Q Consensus 389 L~~I~~~~i~~Mr~~l~~v-~~~~~Y 413 (444)
+. .+++..+|+++..+. ..+|-|
T Consensus 334 ~~--~~~~~~~~~~~~~~~~~~~fs~ 357 (371)
T cd04962 334 LE--DDELWQEFSRAARNRAAERFDS 357 (371)
T ss_pred Hh--CHHHHHHHHHHHHHHHHHhCCH
Confidence 33 577888999888765 555544
No 25
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=92.48 E-value=0.24 Score=48.26 Aligned_cols=94 Identities=10% Similarity=0.027 Sum_probs=57.9
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.+..+.|..+.+++.|.........+.|||.+|| |||.++... .+.--.+..+.++.++..+-.-.|.+++.
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~-------~~e~~~~~g~~~~~~~~~~l~~~i~~l~~ 331 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGD-------NAELVGDTGFLVPPGDPEALAEAIEALLA 331 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCC-------hHHHhhcCCEEeCCCCHHHHHHHHHHHHh
Confidence 4577899999999999876655678999999996 788887642 11111114555665554441111444443
Q ss_pred CCChHHHHHHHHHHHh-hccceeec
Q 045731 391 GVSKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 391 ~I~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
.+++..+|.++..+ +..+|.|.
T Consensus 332 --~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 332 --DPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred --ChHHHHHHHHHHHHHHHHhCCHH
Confidence 24667777776654 34455553
No 26
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=92.39 E-value=0.69 Score=46.83 Aligned_cols=92 Identities=9% Similarity=0.148 Sum_probs=57.9
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeecccc------chh
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKL------RDR 381 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv------~~~ 381 (444)
..+..+.|..|..++.|.-.......+.|||.+|| |||.++.. ..+- .-....+.++..+. ..
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~-------~~~e~i~~~~~G~~~~~~~~~~~~~~~~- 341 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATG-------GIPEVVVDGETGFLVPPDNSDADGFQAE- 341 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCC-------CHHHHhhCCCceEEcCCCCCcccchHHH-
Confidence 45678889999999998654444567899999999 89988763 1221 11223445555444 33
Q ss_pred hhhHHHHHcCC--ChHHHHHHHHHHHh-hccceee
Q 045731 382 RFRINETLLGV--SKVEEEAMREEVIR-LIPRTVY 413 (444)
Q Consensus 382 ~~~i~~iL~~I--~~~~i~~Mr~~l~~-v~~~~~Y 413 (444)
+.+.|..+ .+++..+|.++..+ +...|-|
T Consensus 342 ---l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 342 ---LAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred ---HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 33333322 46777888887765 4455555
No 27
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=92.16 E-value=0.4 Score=48.31 Aligned_cols=96 Identities=8% Similarity=0.137 Sum_probs=60.5
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.++.+.++.|..++.|.-.......++|||.+| +|||.++..... ++ ..-....+.++..+..+=.-.|.+++.
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~~~~----e~-i~~~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVGGPR----DI-VVDGVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCCCHH----HH-ccCCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 457788999999999976555556799999999 599998763110 11 122234556665554441011444443
Q ss_pred CCChHHHHHHHHHHHhhc-cceeec
Q 045731 391 GVSKVEEEAMREEVIRLI-PRTVYG 414 (444)
Q Consensus 391 ~I~~~~i~~Mr~~l~~v~-~~~~Y~ 414 (444)
.+++..+|.++..+.. .+|.|.
T Consensus 368 --~~~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 368 --DPALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred --CHHHHHHHHHHHHHHHHHhCCHH
Confidence 3677888888876654 666553
No 28
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=91.40 E-value=1.2 Score=46.70 Aligned_cols=136 Identities=13% Similarity=0.139 Sum_probs=73.2
Q ss_pred ceEEEEeeecc-cCCcchHHHHHHhhcc---CCCeeeeecCCCCccCCCchhHHHhcccCeeEecCCCCCCCcchHHHHH
Q 045731 265 EYLFCFVGATR-NYGGSIRGSIIGQCKD---SSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSI 340 (444)
Q Consensus 265 ~~L~~F~G~~~-~~~~~iR~~L~~~~~~---~~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai 340 (444)
+.-+.+.|+.+ ......+..|.+..++ .+.+.++. . ....++.+.|+.|..++.|.=+..-...++|||
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g------~-v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAM 345 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVV------N-APFEELLEELSTASIGLHTMWNEHFGIGVVEYM 345 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEec------C-CCHHHHHHHHHhCeEEEECCccCCcccHHHHHH
Confidence 46778888644 2222233444433332 23455542 1 234678899999999998864444457799999
Q ss_pred hhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHHHHcCCChHHHHHHHHHHHhhccceeec
Q 045731 341 LAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINETLLGVSKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 341 ~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~iL~~I~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
.+||.||.-..+-... ...-|. .-..|.+. +.+++.+ .|.++|+. ++++...|+++-.++..+|-+.
T Consensus 346 a~G~pvIa~~~ggp~~--~iv~~~~~g~~G~l~~-d~~~la~---ai~~ll~~-~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 346 AAGLIPLAHASGGPLL--DIVVPWDGGPTGFLAS-TAEEYAE---AIEKILSL-SEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred HcCCcEEEEcCCCCch--heeeccCCCCceEEeC-CHHHHHH---HHHHHHhC-CHHHHHHHHHHHHHHHHhhCHH
Confidence 9999766543221000 000111 11233321 2333333 15555543 6666666777777777776553
No 29
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=91.01 E-value=0.58 Score=46.36 Aligned_cols=94 Identities=10% Similarity=0.103 Sum_probs=59.4
Q ss_pred chhHHHhcccCeeEecCC-CCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHH
Q 045731 310 PVNVMKAFESSVFCLQPP-GDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINET 388 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~-Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~i 388 (444)
..++.+.|+.|..++.|. -.......++|||.+|| |||.++..... ++ .+-..-.+.++.+++.. +.+.
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~~~~----e~-i~~~~~g~~~~~~~~~~----l~~~ 323 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHGGAR----ET-VRPGETGLLVPPGDAEA----LAQA 323 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCCCcH----HH-HhCCCceEEeCCCCHHH----HHHH
Confidence 456788999999999986 22223357999999999 77888753211 00 12223455566666665 5554
Q ss_pred Hc---CCChHHHHHHHHHHHhhc-cceee
Q 045731 389 LL---GVSKVEEEAMREEVIRLI-PRTVY 413 (444)
Q Consensus 389 L~---~I~~~~i~~Mr~~l~~v~-~~~~Y 413 (444)
|. ..++++..+|.++.++.. .+|.|
T Consensus 324 i~~~~~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 324 LDQILSLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhhhh
Confidence 42 236788888888876643 44433
No 30
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=90.96 E-value=0.82 Score=44.38 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=54.6
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..+..+.+.+|.+++.|.........++|||.+|| |||.++..+.. ++ .......+.+...+..+=.-.|.+++
T Consensus 269 ~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~~----~~-~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 269 HEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIP----EI-ITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred HHHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCChH----HH-hcCCcceeEECCCCHHHHHHHHHHHh
Confidence 35678999999999999766656678999999999 67777654211 11 11222235666656554000144444
Q ss_pred cCCChHHHHHHHHHHHhhccceee
Q 045731 390 LGVSKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
.. + +. ...+++...+...+.|
T Consensus 343 ~~-~-~~-~~~~~~~~~~~~~~s~ 363 (377)
T cd03798 343 AD-P-WL-RLGRAARRRVAERFSW 363 (377)
T ss_pred cC-c-HH-HHhHHHHHHHHHHhhH
Confidence 32 2 22 3333444445555554
No 31
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=90.47 E-value=1.6 Score=45.50 Aligned_cols=123 Identities=12% Similarity=0.113 Sum_probs=70.1
Q ss_pred ceEEEEeeecccCCcchHHHHHHhhccC--CCeeeeecCCCCccCCCchhHHHhcccCeeEecCC----CCCCCcchHHH
Q 045731 265 EYLFCFVGATRNYGGSIRGSIIGQCKDS--SSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPP----GDTPTRRSTFD 338 (444)
Q Consensus 265 ~~L~~F~G~~~~~~~~iR~~L~~~~~~~--~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~----Gds~ts~rlfD 338 (444)
++.+.+.|. |..++.|.+..++. +++.++. | -....++.+.|..|..++.|. |.+. ...++|
T Consensus 269 ~i~l~ivG~-----G~~~~~l~~~~~~~~l~~~~~~~---g---~~~~~~~~~~l~~aDv~v~~~~~~~~~~~-p~~~~E 336 (415)
T cd03816 269 KLLCIITGK-----GPLKEKYLERIKELKLKKVTIRT---P---WLSAEDYPKLLASADLGVSLHTSSSGLDL-PMKVVD 336 (415)
T ss_pred CEEEEEEec-----CccHHHHHHHHHHcCCCcEEEEc---C---cCCHHHHHHHHHhCCEEEEccccccccCC-cHHHHH
Confidence 467778883 44566666665543 3344332 1 113567888899998887542 3333 356999
Q ss_pred HHhhCceeEEeeCCCccccccccCCCC-CCceEEEeeccccchhhhhHHHHHcCC-ChHHHHHHHHHHHhhc
Q 045731 339 SILAGCIPVFFHPGSAYTQYKWHLPKN-HTKYSVFIPEKKLRDRRFRINETLLGV-SKVEEEAMREEVIRLI 408 (444)
Q Consensus 339 ai~aGCIPVi~~d~~ay~qy~w~LPfd-~~~fsV~I~e~dv~~~~~~i~~iL~~I-~~~~i~~Mr~~l~~v~ 408 (444)
||.+|+ |||.++...- -++=-| -..+.|- +.+++.+ .|.++|..- ++++..+|.++.++..
T Consensus 337 ama~G~-PVI~s~~~~~----~eiv~~~~~G~lv~-d~~~la~---~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 337 MFGCGL-PVCALDFKCI----DELVKHGENGLVFG-DSEELAE---QLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHcCC-CEEEeCCCCH----HHHhcCCCCEEEEC-CHHHHHH---HHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 999998 9999886310 011112 2334331 2222322 144444431 2778899988876655
No 32
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=90.19 E-value=0.9 Score=45.51 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=33.0
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCC
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGS 353 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ 353 (444)
..++.+.++.+..++.|.-.+.+ ..++|||.+|| |||.++..
T Consensus 252 ~~~~~~~~~~ad~~v~ps~e~~g-~~~~Eama~G~-Pvi~~~~~ 293 (351)
T cd03804 252 DEELRDLYARARAFLFPAEEDFG-IVPVEAMASGT-PVIAYGKG 293 (351)
T ss_pred HHHHHHHHHhCCEEEECCcCCCC-chHHHHHHcCC-CEEEeCCC
Confidence 44578899999999988654443 55899999998 99988763
No 33
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=89.84 E-value=3.5 Score=42.43 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=54.9
Q ss_pred chhHHHhcccCeeEecCCCC-CCCcchHHHHHhhCceeEEeeCCCccccccccCCCCC-CceEEEeeccccchhhhhHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGD-TPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNH-TKYSVFIPEKKLRDRRFRINE 387 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gd-s~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~-~~fsV~I~e~dv~~~~~~i~~ 387 (444)
..+..+.|+.|..++.|... ..-...++|||.+| +|||.++...-. ++=-|. .-+ +.++..+...-.-.|..
T Consensus 267 ~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~~----Eiv~~~~~G~-~l~~~~d~~~la~~I~~ 340 (380)
T PRK15484 267 PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGIT----EFVLEGITGY-HLAEPMTSDSIISDINR 340 (380)
T ss_pred HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCcH----hhcccCCceE-EEeCCCCHHHHHHHHHH
Confidence 35678889999999999753 33346799999999 789998863110 111122 222 23344443330001344
Q ss_pred HHcCCChHHHHHHHHHHHh-hccceeec
Q 045731 388 TLLGVSKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 388 iL~~I~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
+|. ..+..+|.++.++ +..+|.|.
T Consensus 341 ll~---d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 341 TLA---DPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HHc---CHHHHHHHHHHHHHHHHhCCHH
Confidence 443 3345677777754 55666664
No 34
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.31 E-value=2.5 Score=41.86 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=50.7
Q ss_pred hhHHHhcccCeeEecCCCC-CCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccc-cchhhhhHHHH
Q 045731 311 VNVMKAFESSVFCLQPPGD-TPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKK-LRDRRFRINET 388 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gd-s~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~d-v~~~~~~i~~i 388 (444)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++... ++---..-...++..+ +.+ .|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~~-------~~e~~~~~g~~~~~~~~l~~---~i~~l 327 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNPF-------NREVLGDKAIYFKVGDDLAS---LLEEL 327 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCCc-------cceeecCCeeEecCchHHHH---HHHHH
Confidence 4566778888888877543 333467999999999 777776531 2210011223334333 433 13333
Q ss_pred HcCCChHHHHHHHHHHHhhc-cceee
Q 045731 389 LLGVSKVEEEAMREEVIRLI-PRTVY 413 (444)
Q Consensus 389 L~~I~~~~i~~Mr~~l~~v~-~~~~Y 413 (444)
++ .++.+.+|.++..+.. .+|-|
T Consensus 328 ~~--~~~~~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 328 EA--DPEEVSAMAKAARERIREKYTW 351 (363)
T ss_pred Hh--CHHHHHHHHHHHHHHHHHhCCH
Confidence 33 2366777887776543 34554
No 35
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=88.54 E-value=2.7 Score=42.59 Aligned_cols=96 Identities=8% Similarity=-0.025 Sum_probs=55.0
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
.....+.++.|.+++.|.........+.|||.+| +|||.++.... -++=-+.. -.+.++. +..+-.-.|.+++
T Consensus 290 ~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~~----~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~ 362 (392)
T cd03805 290 DSQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGGP----LETVVDGE-TGFLCEP-TPEEFAEAMLKLA 362 (392)
T ss_pred hHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCCc----HHHhccCC-ceEEeCC-CHHHHHHHHHHHH
Confidence 3455688999999998866554456789999999 67777765310 01111322 2233443 3322001144444
Q ss_pred cCCChHHHHHHHHHHHh-hccceeec
Q 045731 390 LGVSKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
. .++...+|+++.++ +...|.|.
T Consensus 363 ~--~~~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 363 N--DPDLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred h--ChHHHHHHHHHHHHHHHHhcCHH
Confidence 4 35567888887765 44555553
No 36
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=88.10 E-value=0.73 Score=46.51 Aligned_cols=94 Identities=12% Similarity=0.088 Sum_probs=59.1
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCC--CCCCceEEEeeccccchhhhhHHHH
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLP--KNHTKYSVFIPEKKLRDRRFRINET 388 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LP--fd~~~fsV~I~e~dv~~~~~~i~~i 388 (444)
.+..+.++.+..++.|.-.......+.|||.+|| |||..+-. +..+ ..-.+-.+.++..+..+-.-.|..+
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~------~g~~~~v~~~~~G~lv~~~d~~~la~~i~~l 342 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVN------YGPSEIIEDGENGYLVPKGDIEALAEAIIEL 342 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCC------CCcHHHcccCCCceEeCCCcHHHHHHHHHHH
Confidence 4577889999999998744333467999999999 77877632 1111 1223445566655544411114444
Q ss_pred HcCCChHHHHHHHHHHHhhccceee
Q 045731 389 LLGVSKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 389 L~~I~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
|. .++.+.+|+++..+....|.+
T Consensus 343 l~--~~~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 343 LN--DPKLLQKFSEAAYENAERYSE 365 (372)
T ss_pred Hc--CHHHHHHHHHHHHHHHHHhhH
Confidence 44 367888999888776666554
No 37
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=88.09 E-value=0.98 Score=36.37 Aligned_cols=80 Identities=11% Similarity=0.156 Sum_probs=45.4
Q ss_pred EecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEe-eccccchhhhhHHHHHcCCChHHHHHHH
Q 045731 323 CLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFI-PEKKLRDRRFRINETLLGVSKVEEEAMR 401 (444)
Q Consensus 323 CL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I-~e~dv~~~~~~i~~iL~~I~~~~i~~Mr 401 (444)
||-|.-.+-...|+||+|.+|+..|.-.. ..+ .--|+..+-.+.+ +.+++.+ .|...|+ .++++++|.
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~-~~~-----~~~~~~~~~~~~~~~~~el~~---~i~~ll~--~~~~~~~ia 70 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVISDDS-PGL-----REIFEDGEHIITYNDPEELAE---KIEYLLE--NPEERRRIA 70 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEECCh-HHH-----HHHcCCCCeEEEECCHHHHHH---HHHHHHC--CHHHHHHHH
Confidence 34443223335799999999996544333 211 2225555445555 4455555 1444444 688899998
Q ss_pred HHHHh-hccceee
Q 045731 402 EEVIR-LIPRTVY 413 (444)
Q Consensus 402 ~~l~~-v~~~~~Y 413 (444)
++..+ +..++.|
T Consensus 71 ~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 71 KNARERVLKRHTW 83 (92)
T ss_pred HHHHHHHHHhCCH
Confidence 88865 4435554
No 38
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=87.65 E-value=2.5 Score=42.84 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=57.3
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeec-cccchhhhhHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPE-KKLRDRRFRIN 386 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e-~dv~~~~~~i~ 386 (444)
..+..+.++.+..++.|.........+.|||.+| +|||.++.. .++- .-....+.++. +++.. .|.
T Consensus 264 ~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~-------~~~~~i~~~~~g~~~~~~~~~a~---~i~ 332 (372)
T cd03792 264 DLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVG-------GIPLQIEDGETGFLVDTVEEAAV---RIL 332 (372)
T ss_pred HHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCC-------CchhhcccCCceEEeCCcHHHHH---HHH
Confidence 3567788899999998875444456899999999 599998863 1221 11122223332 22222 255
Q ss_pred HHHcCCChHHHHHHHHHHHhh-ccceeec
Q 045731 387 ETLLGVSKVEEEAMREEVIRL-IPRTVYG 414 (444)
Q Consensus 387 ~iL~~I~~~~i~~Mr~~l~~v-~~~~~Y~ 414 (444)
+.|. .+++..+|.++..+. ...|.|.
T Consensus 333 ~ll~--~~~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 333 YLLR--DPELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred HHHc--CHHHHHHHHHHHHHHHHHHcCHH
Confidence 5554 467788998887764 4566653
No 39
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=87.01 E-value=15 Score=36.27 Aligned_cols=91 Identities=11% Similarity=0.065 Sum_probs=55.5
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..++.+.|+.|.+.+.|.........+.|||.+||- ||.++..... ++--+ .+-.+.++..+..+-.-.|.+++
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~~~~~----e~~~~-~~~g~~~~~~~~~~~~~~l~~l~ 328 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDVGGIP----DIVDH-GVTGYLAKPGDPEDLAEGIEWLL 328 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecCCCCh----hheeC-CCceEEeCCCCHHHHHHHHHHHH
Confidence 345678899999999998766666789999999985 6666543211 11112 23455566555443111144444
Q ss_pred cCCChHHHHHHHHHHHhhc
Q 045731 390 LGVSKVEEEAMREEVIRLI 408 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v~ 408 (444)
. .+++..+|.++..+..
T Consensus 329 ~--~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 329 A--DPDEREELGEAARELA 345 (365)
T ss_pred h--CHHHHHHHHHHHHHHH
Confidence 3 4566788888776543
No 40
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=86.40 E-value=3.8 Score=39.98 Aligned_cols=91 Identities=8% Similarity=0.074 Sum_probs=55.6
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccc--cchhhhhHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKK--LRDRRFRINE 387 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~d--v~~~~~~i~~ 387 (444)
..++.+.+..|.+.+.|.........++|||.+|+ |||..+..+. .--..-.+-.+.++.++ +.+ .|.+
T Consensus 269 ~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~~-----~~~i~~~~~g~~~~~~~~~~~~---~i~~ 339 (374)
T cd03817 269 REELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPGL-----PDLVADGENGFLFPPGDEALAE---ALLR 339 (374)
T ss_pred hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCCh-----hhheecCceeEEeCCCCHHHHH---HHHH
Confidence 35678899999999999765555678999999986 5556665321 11112223444555444 222 1444
Q ss_pred HHcCCChHHHHHHHHHHHhhccce
Q 045731 388 TLLGVSKVEEEAMREEVIRLIPRT 411 (444)
Q Consensus 388 iL~~I~~~~i~~Mr~~l~~v~~~~ 411 (444)
++. .++..++|+++.++...++
T Consensus 340 l~~--~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 340 LLQ--DPELRRRLSKNAEESAEKF 361 (374)
T ss_pred HHh--ChHHHHHHHHHHHHHHHHH
Confidence 443 2455678888877766554
No 41
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=86.35 E-value=3.8 Score=43.40 Aligned_cols=93 Identities=12% Similarity=0.124 Sum_probs=55.1
Q ss_pred hHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC---CC-----CceEEEeeccccchhhh
Q 045731 312 NVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK---NH-----TKYSVFIPEKKLRDRRF 383 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf---d~-----~~fsV~I~e~dv~~~~~ 383 (444)
...+.++.+.+++.|.-..+......|||.+||.||. ++.. -++- |. ..-.+.++..+..+=.-
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~g-------g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~ 429 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTG-------GLADTVVDGDPEAESGTGFLFEEYDPGALLA 429 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCC-------CccceEecCCCCCCCCceEEeCCCCHHHHHH
Confidence 4567899999999998777666789999999997665 4432 1221 21 13456666655544000
Q ss_pred hHHHHHcCC--ChHHHHHHHHHHHhhccceeec
Q 045731 384 RINETLLGV--SKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 384 ~i~~iL~~I--~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
.|..+|... .++...+|.++.. ...|.|.
T Consensus 430 ~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~ 460 (473)
T TIGR02095 430 ALSRALRLYRQDPSLWEALQKNAM--SQDFSWD 460 (473)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcH
Confidence 133333311 4566777777653 3455553
No 42
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=85.37 E-value=2.3 Score=43.04 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=30.4
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeC
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHP 351 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d 351 (444)
..+.+.++.+..++.|.........+.|||.+| +|||.++
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~ 288 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSD 288 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeC
Confidence 345666788888888865544457899999999 6888887
No 43
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=85.24 E-value=2.1 Score=41.95 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=32.9
Q ss_pred hhHHHhcccCeeEecCCC--CCCCcchHHHHHhhCceeEEeeCCC
Q 045731 311 VNVMKAFESSVFCLQPPG--DTPTRRSTFDSILAGCIPVFFHPGS 353 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~G--ds~ts~rlfDai~aGCIPVi~~d~~ 353 (444)
.+..+.++.+.+++.|.- .+. ...++|||.+|+ |||.+|..
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~-~~~~lEAma~G~-PvI~~~~~ 277 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPF-GLVMIEAMACGT-PVIAFRRG 277 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCc-chHHHHHHhcCC-CEEEeCCC
Confidence 356788999999999964 333 367999999997 99999864
No 44
>PLN02949 transferase, transferring glycosyl groups
Probab=85.19 E-value=2.7 Score=44.92 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=53.7
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
..+..+.++++.+++.|.-+..--..+.|||.+||+||.-..+-... ....+.+-.. .-++.+ ++.+-.-.|.++|
T Consensus 345 ~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~--eIV~~~~~g~-tG~l~~-~~~~la~ai~~ll 420 (463)
T PLN02949 345 YRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM--DIVLDEDGQQ-TGFLAT-TVEEYADAILEVL 420 (463)
T ss_pred HHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc--eeeecCCCCc-ccccCC-CHHHHHHHHHHHH
Confidence 35677889999988877533333357999999998877765432000 0001111011 111111 3322000144444
Q ss_pred cCCChHHHHHHHHHHHhhccceeec
Q 045731 390 LGVSKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
+. ++++..+|+++.++...+|.+.
T Consensus 421 ~~-~~~~r~~m~~~ar~~~~~FS~e 444 (463)
T PLN02949 421 RM-RETERLEIAAAARKRANRFSEQ 444 (463)
T ss_pred hC-CHHHHHHHHHHHHHHHHHcCHH
Confidence 43 5677788998887766665553
No 45
>PRK14098 glycogen synthase; Provisional
Probab=84.49 E-value=3.2 Score=44.58 Aligned_cols=90 Identities=12% Similarity=0.051 Sum_probs=55.9
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCC---CCC---CceEEEeeccccchhhhh
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLP---KNH---TKYSVFIPEKKLRDRRFR 384 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LP---fd~---~~fsV~I~e~dv~~~~~~ 384 (444)
....+.++.|.+++.|.-..+......+||.+||+||+..-+- ++ .|. ..-.+.++..+...
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG--------l~d~v~~~~~~~~~G~l~~~~d~~~---- 440 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG--------IVETIEEVSEDKGSGFIFHDYTPEA---- 440 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC--------CceeeecCCCCCCceeEeCCCCHHH----
Confidence 3456889999999999766666678899999999999876442 22 121 22345556655544
Q ss_pred HHHHHcC----C-ChHHHHHHHHHHHhhccceeec
Q 045731 385 INETLLG----V-SKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 385 i~~iL~~----I-~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
+.+.|.. . .++++.+|+++. +...|.|.
T Consensus 441 la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~ 473 (489)
T PRK14098 441 LVAKLGEALALYHDEERWEELVLEA--MERDFSWK 473 (489)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChH
Confidence 4443332 1 355666666543 33555554
No 46
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=84.12 E-value=6.5 Score=38.69 Aligned_cols=96 Identities=10% Similarity=0.009 Sum_probs=57.1
Q ss_pred chhHHHhcccCeeEecCC---CCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHH
Q 045731 310 PVNVMKAFESSVFCLQPP---GDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRIN 386 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~---Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~ 386 (444)
..++.+.++.+..++.|. +.+.. ..+.|||.+| +|||.++..... +.--+.......++.+|..+-.-.|.
T Consensus 254 ~~~~~~~~~~ad~~i~ps~~~~e~~g-~~~~Ea~~~g-~Pvi~~~~~~~~----~~i~~~~~~g~~~~~~d~~~~~~~i~ 327 (357)
T cd03795 254 DEEKAALLAACDVFVFPSVERSEAFG-IVLLEAMAFG-KPVISTEIGTGG----SYVNLHGVTGLVVPPGDPAALAEAIR 327 (357)
T ss_pred HHHHHHHHHhCCEEEeCCcccccccc-hHHHHHHHcC-CCEEecCCCCch----hHHhhCCCceEEeCCCCHHHHHHHHH
Confidence 345778999999999885 23333 4699999997 577777753110 00002245556666666544100133
Q ss_pred HHHcCCChHHHHHHHHHHHhhc-cceee
Q 045731 387 ETLLGVSKVEEEAMREEVIRLI-PRTVY 413 (444)
Q Consensus 387 ~iL~~I~~~~i~~Mr~~l~~v~-~~~~Y 413 (444)
+++. .+++..+|+++..+.. ++|.+
T Consensus 328 ~l~~--~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 328 RLLE--DPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred HHHH--CHHHHHHHHHHHHHHHHHhcch
Confidence 3443 4678889998887643 44443
No 47
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=83.88 E-value=9.1 Score=37.59 Aligned_cols=97 Identities=10% Similarity=0.022 Sum_probs=55.5
Q ss_pred chhHHHhcccCeeEecCCCC------CCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhh
Q 045731 310 PVNVMKAFESSVFCLQPPGD------TPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRF 383 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gd------s~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~ 383 (444)
..++.+.++++.+++.|... ......++|||.+||-.|. ++..... ++--+ ..-...+++++..+=.-
T Consensus 246 ~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~~~~~----~~i~~-~~~g~~~~~~~~~~l~~ 319 (355)
T cd03799 246 QEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDVSGIP----ELVED-GETGLLVPPGDPEALAD 319 (355)
T ss_pred hHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCCCCcc----hhhhC-CCceEEeCCCCHHHHHH
Confidence 45788999999999998643 2335679999999986654 5442110 11112 22345555545444000
Q ss_pred hHHHHHcCCChHHHHHHHHHHHh-hccceeec
Q 045731 384 RINETLLGVSKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 384 ~i~~iL~~I~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
.|.+++. .+++..+|.++..+ +..+|-|.
T Consensus 320 ~i~~~~~--~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 320 AIERLLD--DPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred HHHHHHh--CHHHHHHHHHHHHHHHHHhcCHH
Confidence 1444443 35667888887754 33455443
No 48
>PRK00654 glgA glycogen synthase; Provisional
Probab=83.19 E-value=7 Score=41.44 Aligned_cols=90 Identities=10% Similarity=0.134 Sum_probs=53.8
Q ss_pred HHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCC-----CceEEEeeccccchhhhhHHH
Q 045731 313 VMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNH-----TKYSVFIPEKKLRDRRFRINE 387 (444)
Q Consensus 313 y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~-----~~fsV~I~e~dv~~~~~~i~~ 387 (444)
....++.|.+++.|.=..+......|||.+||+||+-.-+-. -+.-.|. +.-.+.++..+... +.+
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~-----~e~v~~~~~~~~~~~G~lv~~~d~~~----la~ 420 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGL-----ADTVIDYNPEDGEATGFVFDDFNAED----LLR 420 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCc-----cceeecCCCCCCCCceEEeCCCCHHH----HHH
Confidence 457789999999997666666789999999998877543310 0111122 13356667666554 444
Q ss_pred HHcCC-----ChHHHHHHHHHHHhhccceee
Q 045731 388 TLLGV-----SKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 388 iL~~I-----~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
.|..+ .++...+|.++.. ...|.|
T Consensus 421 ~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw 449 (466)
T PRK00654 421 ALRRALELYRQPPLWRALQRQAM--AQDFSW 449 (466)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHh--ccCCCh
Confidence 33322 3455677766653 244544
No 49
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=81.99 E-value=2.7 Score=43.18 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=55.8
Q ss_pred hHHHhcccCeeEecCC--CCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHH
Q 045731 312 NVMKAFESSVFCLQPP--GDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~--Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
+....++.+..++.|. |.+. ...+.|||.+|| |||.++... -.+.-. .+-.+.++ .+..+-.-.|.++|
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~~-----~~i~~~-~~~g~lv~-~~~~~la~ai~~ll 360 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEAA-----EGIDAL-PGAELLVA-ADPADFAAAILALL 360 (397)
T ss_pred CHHHHHHhCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCccc-----cccccc-CCcceEeC-CCHHHHHHHHHHHH
Confidence 5677889999999884 4444 346999999998 999987521 012211 12344455 44433000144444
Q ss_pred cCCChHHHHHHHHHHHh-hccceeec
Q 045731 390 LGVSKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
. .+++..+|.++.++ +..+|.|.
T Consensus 361 ~--~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 361 A--NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred c--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 4 46677888888766 44667664
No 50
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=81.77 E-value=3.5 Score=43.86 Aligned_cols=96 Identities=14% Similarity=0.013 Sum_probs=57.9
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCC-----CceEEEeeccccchhhhh
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNH-----TKYSVFIPEKKLRDRRFR 384 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~-----~~fsV~I~e~dv~~~~~~ 384 (444)
..+..+.|..+..++.|.-.......++|||.+|| |||.+|..... ++--+. ..-.+.++..|..+-.-.
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~~----elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSCR----ELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCChH----HHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 44677888899988888633333467999999999 88888754211 111121 235666776665541111
Q ss_pred HHHHHcCCChHHHHHHHHHHHh-hcccee
Q 045731 385 INETLLGVSKVEEEAMREEVIR-LIPRTV 412 (444)
Q Consensus 385 i~~iL~~I~~~~i~~Mr~~l~~-v~~~~~ 412 (444)
|.++|. .+++..+|.++..+ +...|.
T Consensus 436 i~~ll~--~~~~~~~~~~~a~~~v~~~~s 462 (475)
T cd03813 436 ILRLLK--DPELRRAMGEAGRKRVERYYT 462 (475)
T ss_pred HHHHhc--CHHHHHHHHHHHHHHHHHhCC
Confidence 444443 46778888887765 333333
No 51
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=81.66 E-value=12 Score=35.79 Aligned_cols=86 Identities=7% Similarity=-0.019 Sum_probs=48.5
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.+..+.+..|.+++.|.-.......+.|||.+||. ||.+|..... ++ ..-..-.+.++.++...-...+..++.
T Consensus 255 ~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~~~~----e~-i~~~~~g~~~~~~~~~~~~~~~~~i~~ 328 (353)
T cd03811 255 SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCPGPR----EI-LEDGENGLLVPVGDEAALAAAALALLD 328 (353)
T ss_pred CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCCChH----HH-hcCCCceEEECCCCHHHHHHHHHHHHh
Confidence 35678899999999997544445679999999985 5556542100 11 122334556666665441000122222
Q ss_pred CC-ChHHHHHHHH
Q 045731 391 GV-SKVEEEAMRE 402 (444)
Q Consensus 391 ~I-~~~~i~~Mr~ 402 (444)
.. .++...+|.+
T Consensus 329 ~~~~~~~~~~~~~ 341 (353)
T cd03811 329 LLLDPELRERLAA 341 (353)
T ss_pred ccCChHHHHHHHH
Confidence 22 2445666666
No 52
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=81.20 E-value=5.5 Score=41.29 Aligned_cols=125 Identities=14% Similarity=0.172 Sum_probs=73.2
Q ss_pred ccCCceEEEEeeecccCCcchHHHHHHhhccCCCeee-eecCCCCccCCCchhHHHhcccCeeEecCC---CCCCCcchH
Q 045731 261 RLKREYLFCFVGATRNYGGSIRGSIIGQCKDSSSCKL-LDCGDKTTNCYNPVNVMKAFESSVFCLQPP---GDTPTRRST 336 (444)
Q Consensus 261 ~~~R~~L~~F~G~~~~~~~~iR~~L~~~~~~~~~~~~-~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~---Gds~ts~rl 336 (444)
..+++.++.+.-... ...-|.++++++...-.+.+ .+|......+.......+.+..=+|=|.-- -..+-+--|
T Consensus 193 ~~k~~~~aw~vSnc~--~~~~R~~~~~~L~k~l~iD~YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKf 270 (372)
T KOG2619|consen 193 SAKTKLAAWLVSNCI--PRSARLDYYKELMKHLEIDSYGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYVTEKF 270 (372)
T ss_pred ccccceeeeeccccC--cchHHHHHHHHHHhhCceeeccccccccccCCCCCcceeecccceEEEEecccCCcccccHHH
Confidence 345555555555442 55778888888776522322 234311112233456678888889988732 233445679
Q ss_pred HHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeec-cccchhhhhHHHHHcCCChHHHH
Q 045731 337 FDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPE-KKLRDRRFRINETLLGVSKVEEE 398 (444)
Q Consensus 337 fDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e-~dv~~~~~~i~~iL~~I~~~~i~ 398 (444)
+-|+.+|.|||+++... |. =-+| .+--|.|+. ..+.+ +.+.|+.+..++.+
T Consensus 271 w~al~~gsVPVvlg~~n-~e---~fvP---~~SfI~vdDF~s~~e----la~ylk~L~~n~~~ 322 (372)
T KOG2619|consen 271 WNALDAGSVPVVLGPPN-YE---NFVP---PDSFIHVDDFQSPQE----LAAYLKKLDKNPAA 322 (372)
T ss_pred HhhhhcCcccEEECCcc-cc---ccCC---CcceEehhhcCCHHH----HHHHHHHhhcCHHH
Confidence 99999999999999853 21 1244 333344443 23445 77788877554433
No 53
>PRK10307 putative glycosyl transferase; Provisional
Probab=81.18 E-value=7.2 Score=40.18 Aligned_cols=94 Identities=6% Similarity=0.001 Sum_probs=58.8
Q ss_pred chhHHHhcccCeeEecCCCCCC----CcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhh
Q 045731 310 PVNVMKAFESSVFCLQPPGDTP----TRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRF 383 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~----ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~ 383 (444)
..++.+.++.|..++.|.=... ....++|+|.+| +|||.++... -.++- + +-.+.++..|+.+
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g-----~~~~~~i~--~~G~~~~~~d~~~--- 362 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPG-----TELGQLVE--GIGVCVEPESVEA--- 362 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCC-----chHHHHHh--CCcEEeCCCCHHH---
Confidence 3567788999999888742221 123589999998 6888886420 01111 2 3456666666665
Q ss_pred hHHHHHcCC--ChHHHHHHHHHHHh-hccceeecC
Q 045731 384 RINETLLGV--SKVEEEAMREEVIR-LIPRTVYGD 415 (444)
Q Consensus 384 ~i~~iL~~I--~~~~i~~Mr~~l~~-v~~~~~Y~~ 415 (444)
+.+.|..+ .+++..+|+++..+ +..+|-|..
T Consensus 363 -la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 363 -LVAAIAALARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred -HHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 55555443 45677889888876 445676643
No 54
>PHA01630 putative group 1 glycosyl transferase
Probab=80.93 E-value=3.1 Score=42.30 Aligned_cols=41 Identities=10% Similarity=0.141 Sum_probs=30.8
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
.+..+.++.+..++.|.-......-+.|||.+|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 5677889999999998533333456999999998 5666654
No 55
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=77.97 E-value=3.7 Score=43.10 Aligned_cols=94 Identities=9% Similarity=0.122 Sum_probs=53.3
Q ss_pred hhHHHhcccC----eeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhh
Q 045731 311 VNVMKAFESS----VFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFR 384 (444)
Q Consensus 311 ~~y~~~m~~S----~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~ 384 (444)
.+..+.++.+ ...+.|.-.......+.|||.+|| |||.++.. ..+- +-.+-.+.++..|...=.-.
T Consensus 328 ~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~g-------g~~eiv~~~~~G~lv~~~d~~~la~~ 399 (439)
T TIGR02472 328 DDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDG-------GPRDIIANCRNGLLVDVLDLEAIASA 399 (439)
T ss_pred HHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCC-------CcHHHhcCCCcEEEeCCCCHHHHHHH
Confidence 3445556554 334445423333456999999999 99999863 1221 22334566676665541111
Q ss_pred HHHHHcCCChHHHHHHHHHHHh-hccceeec
Q 045731 385 INETLLGVSKVEEEAMREEVIR-LIPRTVYG 414 (444)
Q Consensus 385 i~~iL~~I~~~~i~~Mr~~l~~-v~~~~~Y~ 414 (444)
|.++|. .+++..+|.++..+ +..+|.|.
T Consensus 400 i~~ll~--~~~~~~~~~~~a~~~~~~~fsw~ 428 (439)
T TIGR02472 400 LEDALS--DSSQWQLWSRNGIEGVRRHYSWD 428 (439)
T ss_pred HHHHHh--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 444444 45667778777754 55666664
No 56
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=77.94 E-value=9.9 Score=39.06 Aligned_cols=97 Identities=8% Similarity=0.015 Sum_probs=53.3
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHH
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINE 387 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~ 387 (444)
..++.+.++.+..++.|.-.......+.|||.+|| |||.++.. .++- + +...++++. +..+=.-.|.+
T Consensus 260 ~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~g-------g~~e~i~-~~~~~~~~~-~~~~l~~~l~~ 329 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVG-------GIPEVLP-PDMILLAEP-DVESIVRKLEE 329 (398)
T ss_pred HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCC-------Cchhhee-CCceeecCC-CHHHHHHHHHH
Confidence 46788899999999988643333368999999998 56666643 1221 1 122344443 33220011555
Q ss_pred HHcCCChHHHHHHHHHHHhhccceeecCCC
Q 045731 388 TLLGVSKVEEEAMREEVIRLIPRTVYGDHK 417 (444)
Q Consensus 388 iL~~I~~~~i~~Mr~~l~~v~~~~~Y~~p~ 417 (444)
.|... .++...+++...++..+|-|..-.
T Consensus 330 ~l~~~-~~~~~~~~~~~~~~~~~fs~~~~~ 358 (398)
T cd03796 330 AISIL-RTGKHDPWSFHNRVKKMYSWEDVA 358 (398)
T ss_pred HHhCh-hhhhhHHHHHHHHHHhhCCHHHHH
Confidence 55432 222223344445577777775533
No 57
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=75.90 E-value=3.1 Score=45.60 Aligned_cols=115 Identities=13% Similarity=0.181 Sum_probs=67.9
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeecc-------ccchhh
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEK-------KLRDRR 382 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~-------dv~~~~ 382 (444)
...|.+.++.+..++.|.-..+...-..|||.+| +|||.++..-...+.-+.--+..+..|.|... .+.+
T Consensus 465 g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~-- 541 (590)
T cd03793 465 GLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ-- 541 (590)
T ss_pred CcchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH--
Confidence 3478899999999999986666566799999999 69999987521111111111333577887632 2222
Q ss_pred hhHHHHHcC---CChHHHHHHHHHHHhhccceeecCCCCCcCcHHHHHHH
Q 045731 383 FRINETLLG---VSKVEEEAMREEVIRLIPRTVYGDHKSKLEDAFDLAVK 429 (444)
Q Consensus 383 ~~i~~iL~~---I~~~~i~~Mr~~l~~v~~~~~Y~~p~~~~~DAf~~~l~ 429 (444)
|.+.|.. -+..+....|....+....|.|..-..-...|.+.+++
T Consensus 542 --La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 542 --LTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred --HHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 3333333 23334444444444788888886533222456665543
No 58
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=75.84 E-value=14 Score=38.79 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=32.5
Q ss_pred hHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 312 NVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
...+.++.+.+.+.|.-..+......|||.+||.||.-.-+
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g 403 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG 403 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC
Confidence 34578899999999976666667899999999998764433
No 59
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=75.69 E-value=20 Score=37.15 Aligned_cols=90 Identities=12% Similarity=0.156 Sum_probs=49.0
Q ss_pred hhHHHhcccC--eeEecCC-CCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeec-cccchhhhh
Q 045731 311 VNVMKAFESS--VFCLQPP-GDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPE-KKLRDRRFR 384 (444)
Q Consensus 311 ~~y~~~m~~S--~FCL~P~-Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e-~dv~~~~~~ 384 (444)
.+..+.++.+ ...+.|. ..+ -.-.+.|||.+|+ |||.++-. -.|- +-..-.+.++. ++..+=.-.
T Consensus 300 ~e~~~~~~~~~~~v~v~~S~~Eg-~p~~llEAma~G~-PVIas~vg-------g~~e~i~~~~~G~l~~~~~~~~~la~~ 370 (407)
T cd04946 300 SEVYKLYKENPVDVFVNLSESEG-LPVSIMEAMSFGI-PVIATNVG-------GTPEIVDNGGNGLLLSKDPTPNELVSS 370 (407)
T ss_pred HHHHHHHhhcCCCEEEeCCcccc-ccHHHHHHHHcCC-CEEeCCCC-------CcHHHhcCCCcEEEeCCCCCHHHHHHH
Confidence 3555666543 2233343 333 3467999999995 99988753 2232 21222344443 233330011
Q ss_pred HHHHHcCCChHHHHHHHHHHHhhc-cce
Q 045731 385 INETLLGVSKVEEEAMREEVIRLI-PRT 411 (444)
Q Consensus 385 i~~iL~~I~~~~i~~Mr~~l~~v~-~~~ 411 (444)
|.+++. ++++..+|+++.++.+ .+|
T Consensus 371 I~~ll~--~~~~~~~m~~~ar~~~~~~f 396 (407)
T cd04946 371 LSKFID--NEEEYQTMREKAREKWEENF 396 (407)
T ss_pred HHHHHh--CHHHHHHHHHHHHHHHHHHc
Confidence 444444 5788899998887643 344
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=73.94 E-value=27 Score=37.75 Aligned_cols=91 Identities=13% Similarity=0.178 Sum_probs=51.7
Q ss_pred hHHHhcccCeeEecCC-CCCCCcchHHHHHhhCceeEEeeCCCccccccccCC---C-CCCceEEEee-----ccc-cch
Q 045731 312 NVMKAFESSVFCLQPP-GDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLP---K-NHTKYSVFIP-----EKK-LRD 380 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~-Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LP---f-d~~~fsV~I~-----e~d-v~~ 380 (444)
+..+.++.+.-++.|. ..+. ...+.|||.+|| |||.+|-. +-.| - .-+.+-|-.+ +++ +..
T Consensus 385 ~~~~~~~~adv~v~pS~~Egf-gl~~lEAma~G~-PVI~~dv~------~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~ 456 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGF-GLTLMEAVGSGL-GMIGFDVN------YGNPTFIEDNKNGYLIPIDEEEDDEDQIITA 456 (500)
T ss_pred CHHHHHHhCCEEEEcCccccc-cHHHHHHHHhCC-CEEEecCC------CCCHHHccCCCCEEEEeCCccccchhHHHHH
Confidence 4566777777777665 3333 467999999997 67776631 1122 1 2234444432 112 222
Q ss_pred hhhhHHHHHcCCChHHHHHHHHHHHhhccceee
Q 045731 381 RRFRINETLLGVSKVEEEAMREEVIRLIPRTVY 413 (444)
Q Consensus 381 ~~~~i~~iL~~I~~~~i~~Mr~~l~~v~~~~~Y 413 (444)
=.-.|..+| .+++..+|.++..+....|.+
T Consensus 457 la~~I~~ll---~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 457 LAEKIVEYF---NSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHHHHHHh---ChHHHHHHHHHHHHHHHhcCH
Confidence 000144444 356788999998887776655
No 61
>PRK14099 glycogen synthase; Provisional
Probab=73.74 E-value=5.5 Score=42.73 Aligned_cols=91 Identities=12% Similarity=0.148 Sum_probs=56.4
Q ss_pred hhHHHhc-ccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC---CCC--------ceEEEeecccc
Q 045731 311 VNVMKAF-ESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK---NHT--------KYSVFIPEKKL 378 (444)
Q Consensus 311 ~~y~~~m-~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf---d~~--------~fsV~I~e~dv 378 (444)
.+....+ +.|.+.+.|.=..+......|||.+||+||+-.-+ -++- +.. .-.+.++..|.
T Consensus 360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~G--------Gl~d~V~~~~~~~~~~~~~~G~l~~~~d~ 431 (485)
T PRK14099 360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVG--------GLADTVVDANEMAIATGVATGVQFSPVTA 431 (485)
T ss_pred HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCC--------CccceeecccccccccCCCceEEeCCCCH
Confidence 3455555 56888888876666667899999999999884322 1221 221 24566676665
Q ss_pred chhhhhHHHHHcC----C-ChHHHHHHHHHHHhhccceeecC
Q 045731 379 RDRRFRINETLLG----V-SKVEEEAMREEVIRLIPRTVYGD 415 (444)
Q Consensus 379 ~~~~~~i~~iL~~----I-~~~~i~~Mr~~l~~v~~~~~Y~~ 415 (444)
.. +.+.|.. + .++...+|+++.. ...|.|..
T Consensus 432 ~~----La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~ 467 (485)
T PRK14099 432 DA----LAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRN 467 (485)
T ss_pred HH----HHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHH
Confidence 55 4444432 1 4667788888764 35566643
No 62
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=71.68 E-value=22 Score=34.97 Aligned_cols=42 Identities=10% Similarity=-0.022 Sum_probs=33.1
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
..+..+.+.++.++++|.-.......+.|||.+||-. |.++.
T Consensus 257 ~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~Pv-I~s~~ 298 (358)
T cd03812 257 RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPC-ILSDT 298 (358)
T ss_pred cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCE-EEEcC
Confidence 4467789999999999976655668899999999855 45553
No 63
>PLN02939 transferase, transferring glycosyl groups
Probab=68.70 E-value=46 Score=38.83 Aligned_cols=95 Identities=6% Similarity=0.020 Sum_probs=56.3
Q ss_pred HHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCC--------ceEEEeeccccchhhhhH
Q 045731 314 MKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHT--------KYSVFIPEKKLRDRRFRI 385 (444)
Q Consensus 314 ~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~--------~fsV~I~e~dv~~~~~~i 385 (444)
...++.|.+++.|.=..+..-...+||.+||+||+..-+-. -+.=.|++ .-.+.++..+...=.-.|
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL-----~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL 925 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL-----NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSAL 925 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC-----cceeecCCccccccCCCceEEecCCCHHHHHHHH
Confidence 46899999999997666666789999999999997654421 01112321 224445555544300013
Q ss_pred HHHHcCC--ChHHHHHHHHHHHhhccceeecC
Q 045731 386 NETLLGV--SKVEEEAMREEVIRLIPRTVYGD 415 (444)
Q Consensus 386 ~~iL~~I--~~~~i~~Mr~~l~~v~~~~~Y~~ 415 (444)
...|..+ .++.+.+|+++. +...|-|..
T Consensus 926 ~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~ 955 (977)
T PLN02939 926 ERAFNYYKRKPEVWKQLVQKD--MNIDFSWDS 955 (977)
T ss_pred HHHHHHhccCHHHHHHHHHHH--HHhcCCHHH
Confidence 3333322 467788887754 345666644
No 64
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=66.08 E-value=65 Score=31.64 Aligned_cols=164 Identities=11% Similarity=0.093 Sum_probs=90.7
Q ss_pred CCCCCcccCCCCccC--CCCCchhhHHH----------hhhcccCCceEEEEeeecccCCcchHHHHHHhhccCCC---e
Q 045731 231 SWSNDLAIPYPTYFH--PSKQTEVSEWQ----------ERMRRLKREYLFCFVGATRNYGGSIRGSIIGQCKDSSS---C 295 (444)
Q Consensus 231 ~~~~DvviPy~t~fh--P~~~~~~~~w~----------~~~~~~~R~~L~~F~G~~~~~~~~iR~~L~~~~~~~~~---~ 295 (444)
....||++|-..++. |... +..|. ..++-.+|.-.++|+|++. ++..|+.|++...+.++ .
T Consensus 40 ~~~~DIl~P~~~~w~~w~~~~--~~~~~~~~~~~~~~~~~~pW~~K~~~a~WRG~~~--~~~~R~~Lv~~~~~~p~~~da 115 (256)
T smart00672 40 DEYLDIVFPDWSFWAGWPEVN--GRPWDKDLMELEEGNKRTKWSDKNAYAYWRGNPT--VASERLDLIKCNQSSPELVNA 115 (256)
T ss_pred CCCCceEecCHHHhCCCcccc--CcchHHHHHHHHhhhcCCCccccCcCccccCCCC--CCcchHHHHHHhcCCccccee
Confidence 334889888765552 2111 11121 1234567888999999874 22389999988766643 2
Q ss_pred eeee-cCCCCccCCC-------chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCC
Q 045731 296 KLLD-CGDKTTNCYN-------PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHT 367 (444)
Q Consensus 296 ~~~~-c~~~~~~c~~-------~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~ 367 (444)
.+.. |.. ..|.. ...-++...+-+|=+..-|.+++ -|+.=-|.+|+|++..... |.++-.+.=..|.
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S-~rl~~~l~~~Svvl~~~~~--~~~~~~~~L~P~~ 190 (256)
T smart00672 116 RITIQDWP--GKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWS-VRLKYILACDSVVLKVKPE--YYEFFSRGLQPWV 190 (256)
T ss_pred EEEEecCC--CCChHHhcccCcCCCCHHHHhhcceEEecCCccch-hhHHHHHhcCceEEEeCCc--hhHHHHhcccCcc
Confidence 3332 111 12211 11223455678999999999876 5788899999998777654 3333222211344
Q ss_pred ceEEEeec--cc--cchhhhhHHHHHcCCChHHHHHHHHHHHhhcc
Q 045731 368 KYSVFIPE--KK--LRDRRFRINETLLGVSKVEEEAMREEVIRLIP 409 (444)
Q Consensus 368 ~fsV~I~e--~d--v~~~~~~i~~iL~~I~~~~i~~Mr~~l~~v~~ 409 (444)
-| |-|.. .| +.+ ..+.+++ .+++.+++=++..+.+.
T Consensus 191 HY-vPv~~d~sd~~l~~----~i~~~~~-~~~~a~~Ia~~~~~~~~ 230 (256)
T smart00672 191 HY-WPIKSDLSCRELKE----AVDWGNE-HDKKAQEIGKRGSEFIQ 230 (256)
T ss_pred ce-EEeeCCCchhhHHH----HHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 33 22222 22 555 5555555 34555555555555333
No 65
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=65.47 E-value=28 Score=31.28 Aligned_cols=41 Identities=10% Similarity=0.059 Sum_probs=31.1
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
..+...++.|..++.|.........++|||.+|| |||.++.
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 3455556669999999877777789999999976 4555554
No 66
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=59.10 E-value=26 Score=38.54 Aligned_cols=41 Identities=12% Similarity=0.095 Sum_probs=32.6
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
.+..+.|+.+..++.|.=.......+.|||.+|| |||.++.
T Consensus 464 ~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdv 504 (578)
T PRK15490 464 RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPA 504 (578)
T ss_pred hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCC
Confidence 3566778888888888655555678999999999 9998875
No 67
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=58.36 E-value=29 Score=40.86 Aligned_cols=90 Identities=12% Similarity=0.113 Sum_probs=54.6
Q ss_pred hHHHhcccC-----eeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhh
Q 045731 312 NVMKAFESS-----VFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFR 384 (444)
Q Consensus 312 ~y~~~m~~S-----~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~ 384 (444)
+..+.++.+ .|++-..-.++ -.-+.|||.+|+ |||.++.. -++- .-..-.+.++..|...
T Consensus 560 dvp~lYr~Ad~s~DVFV~PS~~EgF-GLvlLEAMAcGl-PVVASdvG-------G~~EII~~g~nGlLVdP~D~ea---- 626 (1050)
T TIGR02468 560 DVPDIYRLAAKTKGVFINPAFIEPF-GLTLIEAAAHGL-PMVATKNG-------GPVDIHRVLDNGLLVDPHDQQA---- 626 (1050)
T ss_pred HHHHHHHHhhhcCCeeeCCcccCCC-CHHHHHHHHhCC-CEEEeCCC-------CcHHHhccCCcEEEECCCCHHH----
Confidence 445566554 45553333333 366999999995 99998753 1221 2234466777766555
Q ss_pred HHHHHcCC--ChHHHHHHHHHHHhhccceeec
Q 045731 385 INETLLGV--SKVEEEAMREEVIRLIPRTVYG 414 (444)
Q Consensus 385 i~~iL~~I--~~~~i~~Mr~~l~~v~~~~~Y~ 414 (444)
|.+.|..+ .++...+|.++..+....|-|.
T Consensus 627 LA~AL~~LL~Dpelr~~m~~~gr~~v~~FSWe 658 (1050)
T TIGR02468 627 IADALLKLVADKQLWAECRQNGLKNIHLFSWP 658 (1050)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHCCHH
Confidence 44433332 4667888998887766666664
No 68
>PLN02275 transferase, transferring glycosyl groups
Probab=57.89 E-value=34 Score=34.96 Aligned_cols=75 Identities=13% Similarity=0.068 Sum_probs=49.4
Q ss_pred ceEEEEeeecccCCcchHHHHHHhhccC--CCeeeeecCCCCccCCCchhHHHhcccCeeEecCC----CCCCCcchHHH
Q 045731 265 EYLFCFVGATRNYGGSIRGSIIGQCKDS--SSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPP----GDTPTRRSTFD 338 (444)
Q Consensus 265 ~~L~~F~G~~~~~~~~iR~~L~~~~~~~--~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~----Gds~ts~rlfD 338 (444)
.+-+.+.|. |..|+.|.++.++. +++.++. ......++.+.|+.+..++.|. |.+. ...++|
T Consensus 261 ~i~l~ivG~-----G~~~~~l~~~~~~~~l~~v~~~~------~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~-p~~llE 328 (371)
T PLN02275 261 RLLFIITGK-----GPQKAMYEEKISRLNLRHVAFRT------MWLEAEDYPLLLGSADLGVSLHTSSSGLDL-PMKVVD 328 (371)
T ss_pred CeEEEEEeC-----CCCHHHHHHHHHHcCCCceEEEc------CCCCHHHHHHHHHhCCEEEEeccccccccc-cHHHHH
Confidence 477888883 56677777666543 3444432 1123567888899999888653 2222 356999
Q ss_pred HHhhCceeEEeeCC
Q 045731 339 SILAGCIPVFFHPG 352 (444)
Q Consensus 339 ai~aGCIPVi~~d~ 352 (444)
||.+|+ |||.++.
T Consensus 329 AmA~G~-PVVa~~~ 341 (371)
T PLN02275 329 MFGCGL-PVCAVSY 341 (371)
T ss_pred HHHCCC-CEEEecC
Confidence 999986 8888764
No 69
>PHA01633 putative glycosyl transferase group 1
Probab=54.42 E-value=14 Score=37.94 Aligned_cols=43 Identities=16% Similarity=0.284 Sum_probs=34.2
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCC
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGS 353 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ 353 (444)
..+..+.++.|.+.+.|.-......-+.|||.+|| |||.++-.
T Consensus 214 ~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~ 256 (335)
T PHA01633 214 REYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP 256 (335)
T ss_pred HHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC
Confidence 34677889999988888655544577999999999 99998763
No 70
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=54.02 E-value=83 Score=32.67 Aligned_cols=95 Identities=13% Similarity=0.121 Sum_probs=52.4
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCce-EEEeeccccchhhhhHHHHH
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKY-SVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~f-sV~I~e~dv~~~~~~i~~iL 389 (444)
.+..+++.++++-+.-.=+..---++.|+|+||-|||.=..+-. ..+.--+|..= .=|..+++..- .-.|.+|+
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP----~lDIV~~~~G~~tGFla~t~~EY-aE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGP----LLDIVTPWDGETTGFLAPTDEEY-AEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCC----ceeeeeccCCccceeecCChHHH-HHHHHHHH
Confidence 46778899999998865444333679999999999987655420 01111133211 11122221111 00155555
Q ss_pred cCCChHHHHHHHHHHHhhccce
Q 045731 390 LGVSKVEEEAMREEVIRLIPRT 411 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v~~~~ 411 (444)
.. ..++...||++-+.-.-+|
T Consensus 423 ~~-~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 423 KL-NYDERNMMRRNARKSLARF 443 (465)
T ss_pred Hc-CHHHHHHHHHHHHHHHHHh
Confidence 54 5566777887765544443
No 71
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=52.75 E-value=27 Score=36.10 Aligned_cols=87 Identities=9% Similarity=0.035 Sum_probs=49.6
Q ss_pred hHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC-CCCceEEEeec-cccchhhhhHHHHH
Q 045731 312 NVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK-NHTKYSVFIPE-KKLRDRRFRINETL 389 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf-d~~~fsV~I~e-~dv~~~~~~i~~iL 389 (444)
++.+.|+.|.+++..+|- ..+.|||.+|+ |||+.+... -|-...--+ .-..+.+.+.. +++.+ .|.++|
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~p-gqe~~N~~~~~~~G~g~~~~~~~~l~~---~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPAP-GQELENALYFEEKGFGKIADTPEEAIK---IVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCCC-CcchhHHHHHHhCCcEEEeCCHHHHHH---HHHHHh
Confidence 567889999999885552 35899999985 888876421 000000000 11234444332 22222 144444
Q ss_pred cCCChHHHHHHHHHHHhhcc
Q 045731 390 LGVSKVEEEAMREEVIRLIP 409 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~v~~ 409 (444)
. .++++.+|+++..+...
T Consensus 337 ~--~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 337 N--GNEQLTNMISTMEQDKI 354 (391)
T ss_pred c--CHHHHHHHHHHHHHhcC
Confidence 4 46788999999876554
No 72
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=51.29 E-value=15 Score=39.19 Aligned_cols=91 Identities=7% Similarity=0.034 Sum_probs=55.5
Q ss_pred chhHHHhcccCeeEecCC-CCCCCcchHHHHHhhCce---eEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhH
Q 045731 310 PVNVMKAFESSVFCLQPP-GDTPTRRSTFDSILAGCI---PVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRI 385 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~-Gds~ts~rlfDai~aGCI---PVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i 385 (444)
..+..+.++.+.-++.|. -++. ..-..|||.+||= |||+++...-. +. .+-.+.|+..|+..-.-.|
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~-~lv~lEAma~g~p~~g~vV~S~~~G~~----~~----~~~g~lv~p~d~~~la~ai 421 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGM-NLVAKEYVACQDDDPGVLILSEFAGAA----EE----LSGALLVNPYDIDEVADAI 421 (460)
T ss_pred HHHHHHHHHhccEEEeCcccccc-CcccceeEEEecCCCceEEEeccccch----hh----cCCCEEECCCCHHHHHHHH
Confidence 456778888988888875 3333 3568899999996 69999753110 11 2335677766655511113
Q ss_pred HHHHcCCChHHHHHHHHHHHhhccc
Q 045731 386 NETLLGVSKVEEEAMREEVIRLIPR 410 (444)
Q Consensus 386 ~~iL~~I~~~~i~~Mr~~l~~v~~~ 410 (444)
.++|. .++++.++|.++..+....
T Consensus 422 ~~~l~-~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 422 HRALT-MPLEERRERHRKLREYVRT 445 (460)
T ss_pred HHHHc-CCHHHHHHHHHHHHHHHHh
Confidence 33443 3667777776666655443
No 73
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=48.10 E-value=1.7e+02 Score=30.64 Aligned_cols=153 Identities=14% Similarity=0.230 Sum_probs=84.5
Q ss_pred cccCCCCccCCCCCchhhHHHhhhcccCCceEEEEeeecccCCcchHHHHHHhhccCCCeeeeecCCCCccC--------
Q 045731 236 LAIPYPTYFHPSKQTEVSEWQERMRRLKREYLFCFVGATRNYGGSIRGSIIGQCKDSSSCKLLDCGDKTTNC-------- 307 (444)
Q Consensus 236 vviPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~F~G~~~~~~~~iR~~L~~~~~~~~~~~~~~c~~~~~~c-------- 307 (444)
.+.++...++.....+...| ....|+.+..-.|+..+. ..+=+.+++.|.+.+.-.++.-......+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~----~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~ 287 (406)
T COG1819 213 FIGPYIGPLLGEAANELPYW----IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVI 287 (406)
T ss_pred CCcCccccccccccccCcch----hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccccccccccCCCceE
Confidence 33344333454444455555 356788888888876311 23334455555555433232211101011
Q ss_pred -CCchhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC-----CCCceEEEeeccccchh
Q 045731 308 -YNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK-----NHTKYSVFIPEKKLRDR 381 (444)
Q Consensus 308 -~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf-----d~~~fsV~I~e~dv~~~ 381 (444)
.+.....+.+.+|.=-.+..|.+ .+.+|+.+| ||+|+-+.. ++.|. .+..+-+.++-+.+...
T Consensus 288 v~~~~p~~~~l~~ad~vI~hGG~g----tt~eaL~~g-vP~vv~P~~------~DQ~~nA~rve~~G~G~~l~~~~l~~~ 356 (406)
T COG1819 288 VADYVPQLELLPRADAVIHHGGAG----TTSEALYAG-VPLVVIPDG------ADQPLNAERVEELGAGIALPFEELTEE 356 (406)
T ss_pred EecCCCHHHHhhhcCEEEecCCcc----hHHHHHHcC-CCEEEecCC------cchhHHHHHHHHcCCceecCcccCCHH
Confidence 12335667899999888887764 488999887 788888765 45555 45666777776555544
Q ss_pred hhhHHHHHcCC-ChHHHHHHHHHHHh
Q 045731 382 RFRINETLLGV-SKVEEEAMREEVIR 406 (444)
Q Consensus 382 ~~~i~~iL~~I-~~~~i~~Mr~~l~~ 406 (444)
. |.+.++.+ .++.+++-.+++.+
T Consensus 357 ~--l~~av~~vL~~~~~~~~~~~~~~ 380 (406)
T COG1819 357 R--LRAAVNEVLADDSYRRAAERLAE 380 (406)
T ss_pred H--HHHHHHHHhcCHHHHHHHHHHHH
Confidence 3 33333332 34445544444443
No 74
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=46.79 E-value=84 Score=31.46 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=57.0
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCC--ccccccccCCCCCCceEEEeeccccchhh--hhHH
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGS--AYTQYKWHLPKNHTKYSVFIPEKKLRDRR--FRIN 386 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~--ay~qy~w~LPfd~~~fsV~I~e~dv~~~~--~~i~ 386 (444)
.++.+.|..+..++...| ...++|||.+|+--|.+..+. ...|...---.--....+.++.+++.... -.|.
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~ 319 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL 319 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH
Confidence 467899999999998776 245999999997555443321 00000000001112346667765532111 0144
Q ss_pred HHHcCCChHHHHHHHHHHHhhccceeecCCCCCcCcHHHHHHHHHHHH
Q 045731 387 ETLLGVSKVEEEAMREEVIRLIPRTVYGDHKSKLEDAFDLAVKGVLER 434 (444)
Q Consensus 387 ~iL~~I~~~~i~~Mr~~l~~v~~~~~Y~~p~~~~~DAf~~~l~~l~~R 434 (444)
+.|.. ++...+|+++..+.. . .++.+.+.+.+...
T Consensus 320 ~ll~~--~~~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~~ 354 (357)
T PRK00726 320 ELLSD--PERLEAMAEAARALG------K-----PDAAERLADLIEEL 354 (357)
T ss_pred HHHcC--HHHHHHHHHHHHhcC------C-----cCHHHHHHHHHHHH
Confidence 44443 666788888753322 2 45666666655543
No 75
>PLN00142 sucrose synthase
Probab=46.44 E-value=65 Score=37.06 Aligned_cols=95 Identities=8% Similarity=0.007 Sum_probs=53.4
Q ss_pred HHHhccc-CeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHHHH
Q 045731 313 VMKAFES-SVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINETL 389 (444)
Q Consensus 313 y~~~m~~-S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~iL 389 (444)
....+++ +...++|.=..+-...+.|||.+|+ |||.++.- -++- .-..-.+.|+..|...-.-.|.+.|
T Consensus 659 Lyr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvG-------G~~EIV~dG~tG~LV~P~D~eaLA~aI~~lL 730 (815)
T PLN00142 659 LYRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQG-------GPAEIIVDGVSGFHIDPYHGDEAANKIADFF 730 (815)
T ss_pred HHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCC-------CHHHHhcCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 3444544 3344566544444467999999997 67777652 1221 2234456666655544111133333
Q ss_pred cC--CChHHHHHHHHHH-HhhccceeecC
Q 045731 390 LG--VSKVEEEAMREEV-IRLIPRTVYGD 415 (444)
Q Consensus 390 ~~--I~~~~i~~Mr~~l-~~v~~~~~Y~~ 415 (444)
+. -.++...+|.++. .++..+|.|..
T Consensus 731 ekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 731 EKCKEDPSYWNKISDAGLQRIYECYTWKI 759 (815)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 22 2577788888876 44667888765
No 76
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=45.51 E-value=1.5e+02 Score=31.01 Aligned_cols=121 Identities=7% Similarity=0.053 Sum_probs=66.9
Q ss_pred ecCCCCCCcccCCCCccCCCCCchhhHHHh----------hhcccCCceEEEEeeecccCCcchHHHHHHhhccCCC---
Q 045731 228 DSQSWSNDLAIPYPTYFHPSKQTEVSEWQE----------RMRRLKREYLFCFVGATRNYGGSIRGSIIGQCKDSSS--- 294 (444)
Q Consensus 228 e~~~~~~DvviPy~t~fhP~~~~~~~~w~~----------~~~~~~R~~L~~F~G~~~~~~~~iR~~L~~~~~~~~~--- 294 (444)
+.+....||++|-.+++ -.....+..|.. .++-.+|.-.++|+|+.. .+..|+.|++.-.+.++
T Consensus 112 ~~~~~~~DIl~Pd~~fw-gw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~~--~~~~R~~L~~~~~~~~~~~~ 188 (395)
T PF05686_consen 112 CKSSDTADILFPDFSFW-GWPEINIGPWDEDRKDIKEGNERVPWEDKKPKAFWRGSPT--VAETRQRLVRCSRSHPDLWD 188 (395)
T ss_pred ccccCcCccccCCcccc-ccccccCCchHHHhhhhhccccCCChhhcccceEECCCcC--CCcchhHHHHHhccCCccce
Confidence 34444588888854432 111112223321 234466778899999874 33479999875444332
Q ss_pred eeeeecCCCCccC-CCchhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 295 CKLLDCGDKTTNC-YNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 295 ~~~~~c~~~~~~c-~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
..+..-....... .....-++..-+-+|=+..-|.+++ -|+.=-|.+|++.+.....
T Consensus 189 a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S-~RlkylL~c~SvVl~~~~~ 246 (395)
T PF05686_consen 189 ARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWS-GRLKYLLACNSVVLKVKSP 246 (395)
T ss_pred eeechhhhhhhccccccccCHHHHhhhheeecCCCceee-hhHHHHHcCCceEEEeCCc
Confidence 2222211110000 1111224455678888999999885 6788888888887666443
No 77
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=45.05 E-value=33 Score=35.54 Aligned_cols=107 Identities=8% Similarity=0.046 Sum_probs=57.4
Q ss_pred hhHHHhcccCeeEecCCCC-CCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHH
Q 045731 311 VNVMKAFESSVFCLQPPGD-TPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINE 387 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gd-s~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~ 387 (444)
++..+.++.+..++++... ...-..+.|||.+|| |||.++...-.. ++.- .-..+.+. ..|..+=...|..
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~~~~---e~~~~~~~~g~~~~--~~d~~~La~~l~~ 384 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTFNFK---EIFERLLQAGAAIQ--VEDAEDLAKAVTY 384 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCccCHH---HHHHHHHHCCCeEE--ECCHHHHHHHHHH
Confidence 4677888999877664321 011234899999996 888876520000 1110 11234333 2233320001444
Q ss_pred HHcCCChHHHHHHHHHHHhhccceeecCCCCCcCcHHHHHHHHHHHH
Q 045731 388 TLLGVSKVEEEAMREEVIRLIPRTVYGDHKSKLEDAFDLAVKGVLER 434 (444)
Q Consensus 388 iL~~I~~~~i~~Mr~~l~~v~~~~~Y~~p~~~~~DAf~~~l~~l~~R 434 (444)
.|. .++...+|.++..+..... .+|.+.+++.+..-
T Consensus 385 ll~--~~~~~~~m~~~a~~~~~~~---------~~~~~~~~~~l~~~ 420 (425)
T PRK05749 385 LLT--DPDARQAYGEAGVAFLKQN---------QGALQRTLQLLEPY 420 (425)
T ss_pred Hhc--CHHHHHHHHHHHHHHHHhC---------ccHHHHHHHHHHHh
Confidence 443 4677788888876655331 36777777666543
No 78
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=44.68 E-value=16 Score=30.56 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=23.4
Q ss_pred cccccchHHHHHhhccCcc-ccCCCCCccEEEE
Q 045731 114 TDHFFLEVIFHNRMKNYEC-LTNDSSLASAIYV 145 (444)
Q Consensus 114 t~qy~~E~~fh~rl~~s~~-rT~dPeeAd~FyV 145 (444)
.+|+-+|.+. ..|.+..+ .|.+|++||+++|
T Consensus 11 ~N~~Dse~i~-~~l~~~G~~~~~~~e~AD~iii 42 (98)
T PF00919_consen 11 MNQYDSERIA-SILQAAGYEIVDDPEEADVIII 42 (98)
T ss_pred ccHHHHHHHH-HHHHhcCCeeecccccCCEEEE
Confidence 4677778444 55666655 8999999999976
No 79
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=43.49 E-value=22 Score=29.92 Aligned_cols=70 Identities=7% Similarity=0.099 Sum_probs=40.2
Q ss_pred CceEEEEeeecccCCcchHHHHHHhhccCCCeeeeecCCCCccCCCchhHHHhcccCeeEecCCC-CCCCcchHHHHHhh
Q 045731 264 REYLFCFVGATRNYGGSIRGSIIGQCKDSSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPG-DTPTRRSTFDSILA 342 (444)
Q Consensus 264 R~~L~~F~G~~~~~~~~iR~~L~~~~~~~~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~G-ds~ts~rlfDai~a 342 (444)
.+.-+.+.|.. .. + ++.. ..+.+.++. .- .++.+.++++.+++.|.- +.-.+..++|+|.+
T Consensus 33 p~~~l~i~G~~---~~----~-l~~~-~~~~v~~~g------~~---~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~ 94 (135)
T PF13692_consen 33 PDIELIIIGNG---PD----E-LKRL-RRPNVRFHG------FV---EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA 94 (135)
T ss_dssp TTEEEEEECES---S-----H-HCCH-HHCTEEEE-------S----HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT
T ss_pred cCEEEEEEeCC---HH----H-HHHh-cCCCEEEcC------CH---HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh
Confidence 35788888863 11 1 2222 224555543 11 478999999999999963 22345789999999
Q ss_pred CceeEEeeCC
Q 045731 343 GCIPVFFHPG 352 (444)
Q Consensus 343 GCIPVi~~d~ 352 (444)
||-. |.++.
T Consensus 95 G~pv-i~~~~ 103 (135)
T PF13692_consen 95 GKPV-IASDN 103 (135)
T ss_dssp T--E-EEEHH
T ss_pred CCCE-EECCc
Confidence 9855 44544
No 80
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=40.19 E-value=73 Score=33.97 Aligned_cols=86 Identities=13% Similarity=0.122 Sum_probs=53.1
Q ss_pred chhHHHhcccCeeEecCC-CCCCCcchHHHHHhhCcee----EEeeCCCccccccccCCCCCCceEEEeeccccchhhhh
Q 045731 310 PVNVMKAFESSVFCLQPP-GDTPTRRSTFDSILAGCIP----VFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFR 384 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~-Gds~ts~rlfDai~aGCIP----Vi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~ 384 (444)
..+..+.++.+.-|+.|. .++.+ --..|||++|+ | ||+++..--. -++. -++.|+..|...-.-.
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~-Lv~lEamA~g~-P~~g~vVlS~~~G~~---~~l~-----~gllVnP~d~~~lA~a 415 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMN-LVAKEYVAAQD-PKDGVLILSEFAGAA---QELN-----GALLVNPYDIDGMADA 415 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccC-ccHHHHHHhcC-CCCceEEEeCCCCCh---HHhC-----CcEEECCCCHHHHHHH
Confidence 567888999999998875 44443 56999999996 8 8998743100 1231 3677777776551111
Q ss_pred HHHHHcCCChHHHHHHHHHHHh
Q 045731 385 INETLLGVSKVEEEAMREEVIR 406 (444)
Q Consensus 385 i~~iL~~I~~~~i~~Mr~~l~~ 406 (444)
|.++|. .|+++.+++.+++.+
T Consensus 416 I~~aL~-~~~~er~~r~~~~~~ 436 (456)
T TIGR02400 416 IARALT-MPLEEREERHRAMMD 436 (456)
T ss_pred HHHHHc-CCHHHHHHHHHHHHH
Confidence 444443 366665555555444
No 81
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=35.96 E-value=1.4e+02 Score=33.84 Aligned_cols=40 Identities=13% Similarity=-0.022 Sum_probs=29.5
Q ss_pred hHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 312 NVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
+....|..+...+.|.-.......+.|||.+|| |||.++.
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~ 623 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLA 623 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECC
Confidence 566778888777777544444578999999995 7888775
No 82
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=35.51 E-value=45 Score=34.02 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=29.6
Q ss_pred hhHHHhcccCeeEecCCCCC-----CCcchHHHHHhhCceeEEeeC
Q 045731 311 VNVMKAFESSVFCLQPPGDT-----PTRRSTFDSILAGCIPVFFHP 351 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds-----~ts~rlfDai~aGCIPVi~~d 351 (444)
.+..+.++.+..|+.|--.+ .....++|+|.+|+ |||-.+
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 56778999999999995332 12246999999996 777654
No 83
>PLN02316 synthase/transferase
Probab=35.39 E-value=47 Score=39.18 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=33.0
Q ss_pred HhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCC
Q 045731 315 KAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPG 352 (444)
Q Consensus 315 ~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~ 352 (444)
..++.+.+.+.|.=..+......+||.+||+||+-.-+
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC
Confidence 68999999999987777778899999999999996554
No 84
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=34.81 E-value=1.2e+02 Score=34.84 Aligned_cols=89 Identities=8% Similarity=-0.015 Sum_probs=51.8
Q ss_pred eeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccchhhhhHHHHHcC--CChHH
Q 045731 321 VFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRDRRFRINETLLG--VSKVE 396 (444)
Q Consensus 321 ~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~~~~~i~~iL~~--I~~~~ 396 (444)
..+++|.=..+--..+.|||.+|+-+ |.++.- -++. .-..-.+.|+..|...-.-.|.++|+. -.++.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlPV-VAT~~G-------G~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~ 716 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLPT-FATRFG-------GPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSY 716 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCCE-EEcCCC-------CHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHH
Confidence 34566654555557799999999855 555432 1221 223445666766655411113333321 25777
Q ss_pred HHHHHHHHH-hhccceeecCCC
Q 045731 397 EEAMREEVI-RLIPRTVYGDHK 417 (444)
Q Consensus 397 i~~Mr~~l~-~v~~~~~Y~~p~ 417 (444)
..+|.++.. ++..+|.|....
T Consensus 717 ~~~ms~~a~~rV~~~FSW~~~A 738 (784)
T TIGR02470 717 WQKISQGGLQRIYEKYTWKIYS 738 (784)
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 888888864 567888887643
No 85
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=31.81 E-value=1.2e+02 Score=32.75 Aligned_cols=157 Identities=12% Similarity=0.062 Sum_probs=77.6
Q ss_pred HHhhhcccCC-ceEEEEeeec-c--cCCcchHHHHHHhhccCCCeeeeecCCCCc--cC------CCchhHHHhcccC-e
Q 045731 255 WQERMRRLKR-EYLFCFVGAT-R--NYGGSIRGSIIGQCKDSSSCKLLDCGDKTT--NC------YNPVNVMKAFESS-V 321 (444)
Q Consensus 255 w~~~~~~~~R-~~L~~F~G~~-~--~~~~~iR~~L~~~~~~~~~~~~~~c~~~~~--~c------~~~~~y~~~m~~S-~ 321 (444)
|++.+...++ ..+++| |+. . .......+.+++.+++.+.-.+........ .. .......++|++. .
T Consensus 287 l~~fl~~~~~g~V~vS~-GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp~v 365 (507)
T PHA03392 287 LEEFLNNSTNGVVYVSF-GSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNV 365 (507)
T ss_pred HHHHHhcCCCcEEEEEC-CCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEecCCCHHHHhcCCCC
Confidence 3333333444 455555 442 2 224457778888887665433343321110 00 0112344666543 3
Q ss_pred eEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC-----CCCceEEEeeccccchhhhhHHHHHcCCChHH
Q 045731 322 FCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK-----NHTKYSVFIPEKKLRDRRFRINETLLGVSKVE 396 (444)
Q Consensus 322 FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf-----d~~~fsV~I~e~dv~~~~~~i~~iL~~I~~~~ 396 (444)
-+.+=.|.. .++.||+.+| ||+|+-+..+ +-+. ......+.++..++.... |.+.++.+-.+
T Consensus 366 ~~fItHGG~---~s~~Eal~~G-vP~v~iP~~~------DQ~~Na~rv~~~G~G~~l~~~~~t~~~--l~~ai~~vl~~- 432 (507)
T PHA03392 366 KAFVTQGGV---QSTDEAIDAL-VPMVGLPMMG------DQFYNTNKYVELGIGRALDTVTVSAAQ--LVLAIVDVIEN- 432 (507)
T ss_pred CEEEecCCc---ccHHHHHHcC-CCEEECCCCc------cHHHHHHHHHHcCcEEEeccCCcCHHH--HHHHHHHHhCC-
Confidence 344444443 3599999998 5888777641 2333 245677888776665422 44444433211
Q ss_pred HHHHHHHHHhhccceeecCCCCCcCcHHHHH
Q 045731 397 EEAMREEVIRLIPRTVYGDHKSKLEDAFDLA 427 (444)
Q Consensus 397 i~~Mr~~l~~v~~~~~Y~~p~~~~~DAf~~~ 427 (444)
.+.|++.+++...+.= .|.++.+.|.+.+
T Consensus 433 -~~y~~~a~~ls~~~~~-~p~~~~~~av~~i 461 (507)
T PHA03392 433 -PKYRKNLKELRHLIRH-QPMTPLHKAIWYT 461 (507)
T ss_pred -HHHHHHHHHHHHHHHh-CCCCHHHHHHHHH
Confidence 3455555555554322 3333334555544
No 86
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=28.33 E-value=1.9e+02 Score=29.46 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=46.8
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHHHHHc
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL 390 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~~iL~ 390 (444)
.++.+.|..+..-.+-.|. ..+.||+.+| +|+|+-+... .|+.+--=..+....+.+...++.... |.+.|+
T Consensus 296 ~p~~~ll~~~d~~I~hgG~----~t~~eal~~G-vP~v~~P~~~-dQ~~~a~~~~~~G~g~~l~~~~~~~~~--l~~al~ 367 (401)
T cd03784 296 VPHDWLLPRCAAVVHHGGA----GTTAAALRAG-VPQLVVPFFG-DQPFWAARVAELGAGPALDPRELTAER--LAAALR 367 (401)
T ss_pred CCHHHHhhhhheeeecCCc----hhHHHHHHcC-CCEEeeCCCC-CcHHHHHHHHHCCCCCCCCcccCCHHH--HHHHHH
Confidence 4567888888877777664 3589999888 5777666531 122110001234455555554432221 444443
Q ss_pred CC-ChHHHHHHHHHHHhh
Q 045731 391 GV-SKVEEEAMREEVIRL 407 (444)
Q Consensus 391 ~I-~~~~i~~Mr~~l~~v 407 (444)
.+ .++..+++++...++
T Consensus 368 ~~l~~~~~~~~~~~~~~~ 385 (401)
T cd03784 368 RLLDPPSRRRAAALLRRI 385 (401)
T ss_pred HHhCHHHHHHHHHHHHHH
Confidence 32 244455555554444
No 87
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=28.18 E-value=5.2e+02 Score=26.28 Aligned_cols=85 Identities=18% Similarity=0.264 Sum_probs=47.4
Q ss_pred hHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC-CCCceEEEeec-cccchhhhhHHHHH
Q 045731 312 NVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK-NHTKYSVFIPE-KKLRDRRFRINETL 389 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf-d~~~fsV~I~e-~dv~~~~~~i~~iL 389 (444)
+..+.|+.|...+.++| + ..+.|||.+|+ |||+.+...- |-.-..++ --....+.+.. +++.+ .|.++|
T Consensus 275 ~~~~l~~aaDv~V~~~g--~--~ti~EAma~g~-PvI~~~~~pg-qe~gn~~~i~~~g~g~~~~~~~~la~---~i~~ll 345 (382)
T PLN02605 275 NMEEWMGACDCIITKAG--P--GTIAEALIRGL-PIILNGYIPG-QEEGNVPYVVDNGFGAFSESPKEIAR---IVAEWF 345 (382)
T ss_pred cHHHHHHhCCEEEECCC--c--chHHHHHHcCC-CEEEecCCCc-cchhhHHHHHhCCceeecCCHHHHHH---HHHHHH
Confidence 57889999999888876 2 24899999997 7777663210 00001111 11234444421 22222 144444
Q ss_pred cCCChHHHHHHHHHHHh
Q 045731 390 LGVSKVEEEAMREEVIR 406 (444)
Q Consensus 390 ~~I~~~~i~~Mr~~l~~ 406 (444)
.. .+++.++|+++..+
T Consensus 346 ~~-~~~~~~~m~~~~~~ 361 (382)
T PLN02605 346 GD-KSDELEAMSENALK 361 (382)
T ss_pred cC-CHHHHHHHHHHHHH
Confidence 43 36778888888654
No 88
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=28.09 E-value=77 Score=32.02 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=27.6
Q ss_pred hHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCC
Q 045731 312 NVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGS 353 (444)
Q Consensus 312 ~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ 353 (444)
+..+.++.|..++.+.|. ...||+.+|| |||+...+
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~ 289 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKV 289 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEcc
Confidence 567889999999998653 3559999986 77777553
No 89
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=25.03 E-value=1.3e+02 Score=29.62 Aligned_cols=36 Identities=11% Similarity=0.285 Sum_probs=29.2
Q ss_pred chhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeC
Q 045731 310 PVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHP 351 (444)
Q Consensus 310 ~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d 351 (444)
..+..+.|..|...+.+.| + .++|++.+| +|+|+-.
T Consensus 232 ~~~m~~lm~~aDl~Is~~G-~----T~~E~~a~g-~P~i~i~ 267 (279)
T TIGR03590 232 VENMAELMNEADLAIGAAG-S----TSWERCCLG-LPSLAIC 267 (279)
T ss_pred HHHHHHHHHHCCEEEECCc-h----HHHHHHHcC-CCEEEEE
Confidence 3567899999999999877 2 299999999 7777654
No 90
>PRK10125 putative glycosyl transferase; Provisional
Probab=23.94 E-value=2.1e+02 Score=29.85 Aligned_cols=61 Identities=10% Similarity=0.059 Sum_probs=41.6
Q ss_pred hhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeCCCccccccccCCC--CCCceEEEeeccccch
Q 045731 311 VNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHPGSAYTQYKWHLPK--NHTKYSVFIPEKKLRD 380 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf--d~~~fsV~I~e~dv~~ 380 (444)
.+..+.++.+...+.|.-.......+.|||.+|| |||.+|-. -+|- +- .-.+.++..|+..
T Consensus 298 ~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~g-------G~~Eiv~~-~~G~lv~~~d~~~ 360 (405)
T PRK10125 298 RKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSD-------AAREVLQK-SGGKTVSEEEVLQ 360 (405)
T ss_pred HHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCC-------ChHHhEeC-CcEEEECCCCHHH
Confidence 4567788888877777644444577999999985 88888753 2332 22 2466777777766
No 91
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=23.49 E-value=5.8e+02 Score=25.56 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=39.1
Q ss_pred cchHHHHHHhhccCCCeeeeecCCCCccCCCchhHHHhcccCeeEecCCCCCCCcchHHHHHhhCceeEEeeC
Q 045731 279 GSIRGSIIGQCKDSSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHP 351 (444)
Q Consensus 279 ~~iR~~L~~~~~~~~~~~~~~c~~~~~~c~~~~~y~~~m~~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~d 351 (444)
..++..+.+.+...+.+.+++ . .+..++...|..+.+.+.+.|- -+.||+.+|| |||...
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~------~-~~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~ 300 (365)
T TIGR00236 241 PVVREPLHKHLGDSKRVHLIE------P-LEYLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLR 300 (365)
T ss_pred hHHHHHHHHHhCCCCCEEEEC------C-CChHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECC
Confidence 346666655554334565553 1 2345678899999999877642 3799999886 777753
No 92
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=22.00 E-value=58 Score=30.76 Aligned_cols=32 Identities=25% Similarity=0.545 Sum_probs=28.0
Q ss_pred cCeeEecCCCCCCCcchHHHHHhhCceeEEee
Q 045731 319 SSVFCLQPPGDTPTRRSTFDSILAGCIPVFFH 350 (444)
Q Consensus 319 ~S~FCL~P~Gds~ts~rlfDai~aGCIPVi~~ 350 (444)
.-++||+..|.+-.=.+.|||=+++.|||+=.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 45799999999888889999999999998744
No 93
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=20.48 E-value=2.5e+02 Score=32.39 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=52.4
Q ss_pred hhHHHhcccCeeEecCC-CCCCCcchHHHHHhhCce---eEEeeCCCccccccccCCCCCCceEEEeeccccchhhhhHH
Q 045731 311 VNVMKAFESSVFCLQPP-GDTPTRRSTFDSILAGCI---PVFFHPGSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRIN 386 (444)
Q Consensus 311 ~~y~~~m~~S~FCL~P~-Gds~ts~rlfDai~aGCI---PVi~~d~~ay~qy~w~LPfd~~~fsV~I~e~dv~~~~~~i~ 386 (444)
.++...++.+.-|+.|+ -|+.+ --..|||++|+- +||+++-.--. -.+ .+-++.|+..|+..-.-.|.
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmn-Lv~lEamA~g~p~~gvlVlSe~~G~~---~~l----~~~allVnP~D~~~lA~AI~ 438 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMN-LVSYEFVACQKAKKGVLVLSEFAGAG---QSL----GAGALLVNPWNITEVSSAIK 438 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccC-cchhhHheeecCCCCCEEeeCCcCch---hhh----cCCeEEECCCCHHHHHHHHH
Confidence 56778999999999886 23332 448999999983 28888642100 011 34578888877665111244
Q ss_pred HHHcCCChHHHHHHHHHHHhh
Q 045731 387 ETLLGVSKVEEEAMREEVIRL 407 (444)
Q Consensus 387 ~iL~~I~~~~i~~Mr~~l~~v 407 (444)
..|. +++++.+++.+.+.+.
T Consensus 439 ~aL~-m~~~er~~r~~~~~~~ 458 (797)
T PLN03063 439 EALN-MSDEERETRHRHNFQY 458 (797)
T ss_pred HHHh-CCHHHHHHHHHHHHHh
Confidence 4443 4666555544444433
No 94
>PHA02756 hypothetical protein; Provisional
Probab=20.37 E-value=1.5e+02 Score=26.01 Aligned_cols=51 Identities=14% Similarity=0.012 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccccccc--c--ccc----CcCCCCCCCceEeecC
Q 045731 10 LGFVFIFYTMICLLLLRNCYSSIIGSTKIDG--I--KVN----SKQVNACLGRYIYIHD 60 (444)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~----~~~~~~c~~~~vyvYd 60 (444)
+++++++.|.-+||.-++...+..++--+.+ | .+. .+..+.|.|-.||..+
T Consensus 10 i~yl~~lgfswlql~wffg~~svgg~iltpsa~pyipplslii~~psn~c~gwav~~~~ 68 (164)
T PHA02756 10 IFYLAFLGFSWLQLPWFFGIPSVGGFILTPSAHPYIPPLSLIITKPSNECEGWAVKFFE 68 (164)
T ss_pred HHHHHHHhHHHHhhHHhhccCCcceEEECCCCCCCCCCeEEEEEccCCcccceEEEEEe
Confidence 5677788888889988888777554331111 1 011 1466889999998755
No 95
>PLN02208 glycosyltransferase family protein
Probab=20.32 E-value=1.4e+02 Score=31.80 Aligned_cols=86 Identities=13% Similarity=0.129 Sum_probs=46.3
Q ss_pred chHHHHHhhCceeEEeeCCCccccccccCCC------CCCceEEEeeccc---cchhhhhHHHHHcCC---ChHHHHHHH
Q 045731 334 RSTFDSILAGCIPVFFHPGSAYTQYKWHLPK------NHTKYSVFIPEKK---LRDRRFRINETLLGV---SKVEEEAMR 401 (444)
Q Consensus 334 ~rlfDai~aGCIPVi~~d~~ay~qy~w~LPf------d~~~fsV~I~e~d---v~~~~~~i~~iL~~I---~~~~i~~Mr 401 (444)
.++.||+.+| ||++..+..+ +.+. +--...|.+..++ +.... |.+.++.+ +.++-++||
T Consensus 340 nS~~Eai~~G-VP~l~~P~~~------DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~--l~~ai~~~m~~~~e~g~~~r 410 (442)
T PLN02208 340 GTIWESLVSD-CQMVLIPFLS------DQVLFTRLMTEEFEVSVEVSREKTGWFSKES--LSNAIKSVMDKDSDLGKLVR 410 (442)
T ss_pred hHHHHHHHcC-CCEEecCcch------hhHHHHHHHHHHhceeEEeccccCCcCcHHH--HHHHHHHHhcCCchhHHHHH
Confidence 4699999998 5777776532 2222 1123456665432 33222 33433332 224567888
Q ss_pred HHHHhhccceeecCCCCCcCcHHHHHHHHH
Q 045731 402 EEVIRLIPRTVYGDHKSKLEDAFDLAVKGV 431 (444)
Q Consensus 402 ~~l~~v~~~~~Y~~p~~~~~DAf~~~l~~l 431 (444)
++.+++...+. ..++. ..+++-.++.+
T Consensus 411 ~~~~~~~~~~~--~~gsS-~~~l~~~v~~l 437 (442)
T PLN02208 411 SNHTKLKEILV--SPGLL-TGYVDKFVEEL 437 (442)
T ss_pred HHHHHHHHHHh--cCCcH-HHHHHHHHHHH
Confidence 88888777763 23333 44454444444
Done!