Query 045732
Match_columns 697
No_of_seqs 284 out of 2007
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 05:00:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045732.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045732hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02893 Cellulose synthase-li 100.0 4E-171 9E-176 1448.6 59.6 694 2-696 12-708 (734)
2 PLN02638 cellulose synthase A 100.0 1E-166 2E-171 1439.5 50.8 686 2-697 255-1039(1079)
3 PLN02189 cellulose synthase 100.0 1E-166 2E-171 1435.5 51.1 685 2-697 237-1000(1040)
4 PLN02400 cellulose synthase 100.0 1E-166 2E-171 1440.1 49.1 686 2-697 262-1044(1085)
5 PLN02195 cellulose synthase A 100.0 5E-166 1E-170 1423.9 53.1 685 2-697 158-935 (977)
6 PLN02436 cellulose synthase A 100.0 1E-165 2E-170 1425.6 52.7 685 2-697 271-1054(1094)
7 PLN02915 cellulose synthase A 100.0 9E-164 2E-168 1411.5 52.9 687 2-697 193-1004(1044)
8 PLN02248 cellulose synthase-li 100.0 2E-162 5E-167 1401.5 51.6 690 2-697 268-1098(1135)
9 PLN02190 cellulose synthase-li 100.0 3E-161 8E-166 1359.7 48.2 671 2-696 9-734 (756)
10 PF03552 Cellulose_synt: Cellu 100.0 1E-150 3E-155 1271.3 34.2 598 92-697 1-686 (720)
11 TIGR03030 CelA cellulose synth 100.0 2E-72 4.3E-77 660.5 54.3 499 16-696 56-570 (713)
12 PRK11498 bcsA cellulose syntha 100.0 5.3E-72 1.1E-76 655.4 51.6 480 16-694 185-681 (852)
13 PRK05454 glucosyltransferase M 100.0 4.2E-38 9E-43 365.4 52.1 345 15-517 40-405 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 4.3E-37 9.4E-42 320.1 27.2 244 92-485 1-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 7.2E-35 1.6E-39 326.4 41.1 231 87-489 72-306 (444)
16 COG1215 Glycosyltransferases, 100.0 1.7E-35 3.8E-40 328.2 32.2 233 89-489 53-290 (439)
17 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 6.6E-34 1.4E-38 318.2 37.2 280 87-539 46-341 (439)
18 PRK11204 N-glycosyltransferase 100.0 4.2E-33 9E-38 309.2 42.0 229 87-489 51-285 (420)
19 PRK14716 bacteriophage N4 adso 100.0 6.6E-30 1.4E-34 288.0 43.4 262 87-511 63-353 (504)
20 cd06421 CESA_CelA_like CESA_Ce 100.0 1E-30 2.2E-35 264.3 24.9 229 90-487 1-234 (234)
21 cd06437 CESA_CaSu_A2 Cellulose 100.0 9.2E-31 2E-35 266.5 24.0 228 90-483 1-232 (232)
22 PRK11234 nfrB bacteriophage N4 100.0 1.9E-28 4.1E-33 286.3 36.7 235 86-488 59-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 1.8E-29 3.9E-34 259.2 22.8 231 90-488 1-235 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 7.7E-29 1.7E-33 252.2 23.9 231 93-491 1-235 (236)
25 TIGR03472 HpnI hopanoid biosyn 100.0 4E-26 8.7E-31 250.3 30.2 228 87-484 38-273 (373)
26 PF13641 Glyco_tranf_2_3: Glyc 100.0 4.2E-29 9.1E-34 252.5 5.6 224 90-482 1-228 (228)
27 cd04190 Chitin_synth_C C-termi 99.9 1.9E-27 4E-32 245.7 16.1 172 274-485 64-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.9 9.2E-24 2E-28 244.5 37.7 236 86-487 67-341 (703)
29 cd02520 Glucosylceramide_synth 99.9 8.4E-26 1.8E-30 224.8 17.1 193 90-482 1-195 (196)
30 cd04192 GT_2_like_e Subfamily 99.9 4.8E-25 1E-29 221.6 22.1 224 94-482 1-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 5E-24 1.1E-28 216.2 20.3 229 91-485 1-234 (235)
32 TIGR03469 HonB hopene-associat 99.9 4.2E-22 9.2E-27 219.4 32.7 233 86-481 36-280 (384)
33 cd06439 CESA_like_1 CESA_like_ 99.9 4.9E-23 1.1E-27 211.5 23.3 226 86-486 25-251 (251)
34 COG2943 MdoH Membrane glycosyl 99.9 5.6E-19 1.2E-23 191.9 43.8 202 254-514 213-422 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 4E-21 8.7E-26 195.5 20.0 224 91-488 1-232 (249)
36 cd06436 GlcNAc-1-P_transferase 99.8 1.9E-19 4.1E-24 178.9 18.4 118 254-378 51-178 (191)
37 cd06438 EpsO_like EpsO protein 99.8 2.4E-19 5.2E-24 176.3 14.1 164 94-377 1-169 (183)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 1.6E-18 3.4E-23 171.6 15.1 137 290-483 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 1.1E-17 2.3E-22 165.6 16.1 194 90-457 1-196 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 5.8E-17 1.3E-21 160.5 15.7 136 255-457 57-196 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 3.7E-16 8E-21 166.0 17.0 200 93-458 1-221 (299)
42 cd06433 GT_2_WfgS_like WfgS an 99.7 1.3E-15 2.9E-20 149.0 15.7 187 93-457 1-189 (202)
43 PLN02726 dolichyl-phosphate be 99.6 7.5E-15 1.6E-19 151.3 20.0 140 255-456 70-212 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 3.4E-15 7.5E-20 148.3 16.2 194 93-457 1-198 (214)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 5.2E-15 1.1E-19 148.5 17.4 121 269-453 58-178 (221)
46 PF13506 Glyco_transf_21: Glyc 99.6 3E-15 6.5E-20 147.8 15.0 154 268-481 15-175 (175)
47 cd04186 GT_2_like_c Subfamily 99.6 6.3E-15 1.4E-19 139.9 16.6 100 268-457 59-160 (166)
48 cd06913 beta3GnTL1_like Beta 1 99.6 2.5E-14 5.4E-19 144.4 20.3 201 94-457 1-204 (219)
49 cd06442 DPM1_like DPM1_like re 99.6 1.6E-14 3.5E-19 145.2 17.5 194 94-456 1-197 (224)
50 cd06420 GT2_Chondriotin_Pol_N 99.6 2.6E-14 5.7E-19 139.0 18.0 106 269-455 65-173 (182)
51 cd04185 GT_2_like_b Subfamily 99.6 2.5E-14 5.4E-19 142.1 17.6 166 94-457 1-168 (202)
52 PF03142 Chitin_synth_2: Chiti 99.6 4.7E-13 1E-17 151.1 29.8 169 286-488 200-379 (527)
53 cd02526 GT2_RfbF_like RfbF is 99.5 3.5E-14 7.6E-19 144.2 11.7 143 255-457 49-199 (237)
54 cd06423 CESA_like CESA_like is 99.5 2.5E-14 5.5E-19 134.9 9.5 163 94-378 1-169 (180)
55 PRK10073 putative glycosyl tra 99.5 6.6E-14 1.4E-18 151.5 13.1 198 89-457 5-211 (328)
56 cd04188 DPG_synthase DPG_synth 99.5 3.2E-13 7E-18 135.5 15.4 138 256-456 60-202 (211)
57 PRK10063 putative glycosyl tra 99.5 1.7E-12 3.6E-17 135.2 18.4 190 90-458 1-192 (248)
58 PRK10018 putative glycosyl tra 99.5 1.4E-12 3E-17 138.1 17.7 110 88-315 3-112 (279)
59 cd04179 DPM_DPG-synthase_like 99.4 1E-12 2.3E-17 127.9 12.5 165 94-378 1-166 (185)
60 PF00535 Glycos_transf_2: Glyc 99.4 9.7E-14 2.1E-18 130.9 4.5 166 93-378 1-168 (169)
61 PTZ00260 dolichyl-phosphate be 99.4 3.8E-11 8.2E-16 130.3 23.9 117 87-315 67-189 (333)
62 TIGR01556 rhamnosyltran L-rham 99.4 6.7E-12 1.5E-16 132.0 14.9 145 254-457 46-196 (281)
63 cd04187 DPM1_like_bac Bacteria 99.3 2.4E-11 5.1E-16 118.7 13.0 107 254-378 56-162 (181)
64 COG1216 Predicted glycosyltran 99.2 2.9E-10 6.3E-15 121.6 17.8 210 89-468 2-225 (305)
65 PF10111 Glyco_tranf_2_2: Glyc 99.2 3.4E-10 7.4E-15 119.9 17.7 132 269-457 74-217 (281)
66 cd00761 Glyco_tranf_GTA_type G 99.2 3.6E-10 7.7E-15 103.9 15.2 91 268-452 62-155 (156)
67 PRK10714 undecaprenyl phosphat 99.2 1.9E-09 4.1E-14 116.7 21.5 43 268-315 75-117 (325)
68 PRK13915 putative glucosyl-3-p 99.2 3.4E-10 7.4E-15 121.5 15.1 51 268-327 100-152 (306)
69 KOG2571 Chitin synthase/hyalur 99.2 1.2E-09 2.7E-14 127.7 20.2 168 269-482 424-596 (862)
70 cd02511 Beta4Glucosyltransfera 98.7 7.6E-08 1.6E-12 98.5 11.8 44 268-316 56-99 (229)
71 COG0463 WcaA Glycosyltransfera 98.7 7.3E-08 1.6E-12 90.9 10.8 46 89-140 2-47 (291)
72 KOG2547 Ceramide glucosyltrans 98.7 6.3E-08 1.4E-12 103.2 9.2 152 269-481 156-314 (431)
73 KOG2978 Dolichol-phosphate man 98.6 6.5E-07 1.4E-11 87.6 13.6 107 254-378 64-176 (238)
74 KOG2977 Glycosyltransferase [G 97.7 0.00021 4.5E-09 74.5 11.2 45 268-316 142-188 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.7 0.00037 8E-09 75.7 13.5 43 92-138 2-44 (334)
76 KOG3737 Predicted polypeptide 97.1 0.00065 1.4E-08 73.3 6.0 51 84-137 149-199 (603)
77 KOG3736 Polypeptide N-acetylga 96.7 0.00096 2.1E-08 76.8 2.6 48 87-137 139-186 (578)
78 PF02364 Glucan_synthase: 1,3- 95.6 0.14 3.1E-06 61.1 13.5 177 268-503 273-475 (817)
79 KOG3738 Predicted polypeptide 95.6 0.046 9.9E-07 59.7 8.5 49 87-138 121-169 (559)
80 PF13704 Glyco_tranf_2_4: Glyc 94.7 0.14 3.1E-06 45.0 7.7 34 102-140 1-34 (97)
81 TIGR02460 osmo_MPGsynth mannos 90.6 3.8 8.1E-05 44.7 12.6 44 268-314 141-184 (381)
82 PF13712 Glyco_tranf_2_5: Glyc 90.3 0.62 1.3E-05 47.8 6.4 50 268-325 39-89 (217)
83 cd00899 b4GalT Beta-4-Galactos 89.3 1.1 2.5E-05 46.0 7.3 141 268-487 47-200 (219)
84 PRK14503 mannosyl-3-phosphogly 89.2 4 8.6E-05 44.8 11.5 102 268-378 142-262 (393)
85 COG4092 Predicted glycosyltran 88.7 7 0.00015 41.2 12.5 81 252-335 61-142 (346)
86 PF03071 GNT-I: GNT-I family; 87.5 1.6 3.4E-05 49.3 7.6 48 87-139 90-138 (434)
87 PF01644 Chitin_synth_1: Chiti 84.4 13 0.00029 36.5 11.3 53 255-313 111-163 (163)
88 PF03452 Anp1: Anp1; InterPro 84.2 5.3 0.00011 42.4 9.1 55 87-145 22-78 (269)
89 PRK14502 bifunctional mannosyl 79.2 3.7 8.1E-05 48.9 6.4 44 268-314 146-189 (694)
90 PF02709 Glyco_transf_7C: N-te 78.0 2.2 4.8E-05 36.7 3.1 30 427-456 35-67 (78)
91 PF09488 Osmo_MPGsynth: Mannos 70.4 9.4 0.0002 41.9 6.2 43 268-313 141-183 (381)
92 KOG0916 1,3-beta-glucan syntha 66.7 1.3E+02 0.0028 38.8 15.3 181 268-505 1049-1241(1679)
93 PF05679 CHGN: Chondroitin N-a 64.3 63 0.0014 37.5 11.8 47 255-309 316-362 (499)
94 PF13896 Glyco_transf_49: Glyc 56.6 16 0.00034 39.8 4.9 45 276-325 120-164 (317)
95 PF11316 Rhamno_transf: Putati 43.9 1.8E+02 0.0039 30.3 10.2 55 252-314 84-140 (234)
96 KOG4179 Lysyl hydrolase/glycos 41.4 33 0.00072 38.4 4.3 36 271-311 98-133 (568)
97 PRK09382 ispDF bifunctional 2- 40.0 70 0.0015 35.8 6.8 41 271-315 83-123 (378)
98 PF02434 Fringe: Fringe-like; 36.3 47 0.001 34.9 4.5 27 286-313 85-111 (252)
99 PLN03153 hypothetical protein; 33.7 1.2E+02 0.0025 35.4 7.3 29 286-316 209-237 (537)
100 PF04724 Glyco_transf_17: Glyc 31.8 1.2E+02 0.0025 33.8 6.8 37 271-309 163-199 (356)
101 TIGR03584 PseF pseudaminic aci 26.9 6E+02 0.013 25.9 10.7 58 269-326 76-133 (222)
102 cd04182 GT_2_like_f GT_2_like_ 26.7 1.5E+02 0.0032 28.4 5.9 45 268-315 73-118 (186)
103 PF03213 Pox_P35: Poxvirus P35 24.1 1.7E+02 0.0036 32.0 6.0 45 286-334 117-161 (325)
104 TIGR02665 molyb_mobA molybdopt 24.0 1.3E+02 0.0027 29.2 4.9 43 268-315 72-115 (186)
105 cd02540 GT2_GlmU_N_bac N-termi 23.7 2.5E+02 0.0054 28.0 7.2 44 269-315 73-117 (229)
106 PF01762 Galactosyl_T: Galacto 23.1 65 0.0014 32.0 2.7 37 273-313 69-105 (195)
No 1
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=4.1e-171 Score=1448.64 Aligned_cols=694 Identities=67% Similarity=1.208 Sum_probs=655.2
Q ss_pred CCccccccCCchhhHHHHHHHHHHHHHHHHHHHhh-ccCC-ChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCchh
Q 045732 2 WPLNTTEPLRRTALNRVFAAVYTCAIFGLLYHHVQ-IIHS-RTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPEN 79 (697)
Q Consensus 2 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~yl~~R~~-~~~~-~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~ 79 (697)
.||||+++.|++.++|+++++++++++++++||+. .+.+ ..++| +++++||+||+|+|+++|+.||+|++|.+++|+
T Consensus 12 ~pL~~~~~~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w-~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~~~~~ 90 (734)
T PLN02893 12 PPLHTCHPMRRTIANRVFAVVYSCAILALLYHHVIALLHSTTTLIT-LLLLLADIVLAFMWATTQAFRMCPVHRRVFIEH 90 (734)
T ss_pred CCceeeeecCCchHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-HHHHHHHHHHHHHHHHccCccccccccccCHHH
Confidence 58999999999988999999999999999999999 4444 37899 999999999999999999999999999999999
Q ss_pred hhccCCCCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccc
Q 045732 80 LLKVMKPSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRK 159 (697)
Q Consensus 80 l~~~~~~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k 159 (697)
|.+..+.+++|.||||||||||++|||.+++|||+|++|.|||.||++|||||||++.+|||+|.||++|||.|||||||
T Consensus 91 L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk 170 (734)
T PLN02893 91 LEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKK 170 (734)
T ss_pred HhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccc
Confidence 98643456799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEee
Q 045732 160 NNVLETNPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLI 239 (697)
Q Consensus 160 ~~v~~~~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~ 239 (697)
|||+|||||+||+++++++.+|+++||+||||||.|||++++.++++++++.+++++++|++|+++++++|||+||||++
T Consensus 171 ~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l 250 (734)
T PLN02893 171 NKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLL 250 (734)
T ss_pred cCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeec
Confidence 99999999999999877889999999999999999999999989999998777888899999999999999999999999
Q ss_pred cCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCC
Q 045732 240 DNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTR 319 (697)
Q Consensus 240 ~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~ 319 (697)
|++++.|.+|.++|+++|++||||||++||+||||||+++++|+.+||||||+++||||++|||++++++||||.||+.+
T Consensus 251 ~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~ 330 (734)
T PLN02893 251 ESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMD 330 (734)
T ss_pred cCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcC
Confidence 99988888899999999999999999999999999999999999999999999999999998899999999999999888
Q ss_pred CcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCC
Q 045732 320 SNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEP 399 (697)
Q Consensus 320 ~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~ 399 (697)
+++|+||+||+|+|.+++|+++++.++||+++++|+||++|++||||||+|||+||++.+++....+.+++..+...++.
T Consensus 331 ~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~ 410 (734)
T PLN02893 331 PKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKS 410 (734)
T ss_pred CceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999987443333444455444445566
Q ss_pred CCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHH
Q 045732 400 IQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRW 479 (697)
Q Consensus 400 ~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RW 479 (697)
..+.+++++|++|+||.||++|.||+++||.|+|+|||+.||++||++|||++|++++++++.|++|+|+.++++||+||
T Consensus 411 ~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RW 490 (734)
T PLN02893 411 IKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRW 490 (734)
T ss_pred cchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHH
Confidence 77888999999999999999999999999999999999999999999999999999877889999999999999999999
Q ss_pred ccCcchhhhhccCcccccCCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHHHH
Q 045732 480 AIGGLQMAFARYSPFTVGTKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAY 558 (697)
Q Consensus 480 a~G~lqi~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~ 558 (697)
++|++|++++|+||+++|.++|++ ||++|++.++|+++++|.++|+++|++||++|++++|+++.+|+++|+.++++++
T Consensus 491 a~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~ 570 (734)
T PLN02893 491 SVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAY 570 (734)
T ss_pred HhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHH
Confidence 999999999999999977789999 9999999999999999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccch
Q 045732 559 GQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMF 638 (697)
Q Consensus 559 ~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~ 638 (697)
+++++|++|+|.++++|||+||+|+|.++++++++++++++|++|+++.+|+||+|+.+.+++++|+++.|+|++++|++
T Consensus 571 ~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ 650 (734)
T PLN02893 571 GQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMF 650 (734)
T ss_pred HHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhH
Confidence 99999999999999999999999999999999999999999999999999999999987777789999999999889999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCC
Q 045732 639 VPLAMAAIINLFSFFLGLLKMVGGSDKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDAC 696 (697)
Q Consensus 639 ~P~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~ 696 (697)
+|+++++++|++|+++|+++++.++.+++++++++||+|++++++||++||+.||||+
T Consensus 651 ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg 708 (734)
T PLN02893 651 LPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDG 708 (734)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999998777788899999999999999999999999998853
No 2
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=9.9e-167 Score=1439.49 Aligned_cols=686 Identities=36% Similarity=0.651 Sum_probs=630.7
Q ss_pred CCccccccCCch--hhHHHHHHHHHHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRT--ALNRVFAAVYTCAIFGLLYHHVQ-IIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~--~~~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||+++++.|++ .+||+++++++++++++++||++ ..+++.|+| +++++||+||+|+|+++|++||+|++|.++++
T Consensus 255 ~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W-l~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t~~d 333 (1079)
T PLN02638 255 QPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALW-LISVICEIWFALSWILDQFPKWLPVNRETYLD 333 (1079)
T ss_pred CCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHH-HHHHHHHHHHHHHHHHhccccccccccccCHH
Confidence 489999999999 57999999999999999999999 555678899 99999999999999999999999999999999
Q ss_pred hhhc-cCC---CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcc
Q 045732 79 NLLK-VMK---PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWL 154 (697)
Q Consensus 79 ~l~~-~~~---~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~ 154 (697)
+|.+ +.+ +++||.||||||||||++|||.+++|||+|+||.|||.|||+|||||||++.+|||+|.||++|||.||
T Consensus 334 rL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~Wv 413 (1079)
T PLN02638 334 RLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWV 413 (1079)
T ss_pred HHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhc
Confidence 9986 222 246999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhh-ccCccccccccchhhhhhhccccCC
Q 045732 155 PFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVV-NTGKVSDEYITSDQEREAFNKWTDN 225 (697)
Q Consensus 155 pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~-~~~~~~~~~~~~~~~~~~f~~w~~~ 225 (697)
||||||||+|||||+|||.+. ++|++|+++||+||||||+|||.++ +++++|++.++ ++.+++|+++
T Consensus 414 PFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~----m~dgt~W~g~ 489 (1079)
T PLN02638 414 PFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWI----MQDGTPWPGN 489 (1079)
T ss_pred ccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccc----ccCCccCCCC
Confidence 999999999999999999863 4899999999999999999999987 57888877543 3447899886
Q ss_pred CCcCCCccceeEeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcH
Q 045732 226 FSRYDHPAVIQVLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQT 305 (697)
Q Consensus 226 ~~~~~h~~~~~v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~ 305 (697)
.++|||+||||+.+++++.|.+|.++|+++||+||||||++||+||||||+++|+|+.+||||||+++||||++|||++
T Consensus 490 -~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~a 568 (1079)
T PLN02638 490 -NTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKA 568 (1079)
T ss_pred -CCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHH
Confidence 7889999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCC-
Q 045732 306 PLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLIS- 384 (697)
Q Consensus 306 L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~- 384 (697)
++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||++||+|+||||+|||+||++..|+...
T Consensus 569 lr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~ 648 (1079)
T PLN02638 569 LREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPK 648 (1079)
T ss_pred HHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997432210
Q ss_pred ---CC--------------------C------CC----------------------------------CCCC--------
Q 045732 385 ---PE--------------------I------PE----------------------------------LHPN-------- 393 (697)
Q Consensus 385 ---~~--------------------~------~~----------------------------------~~~~-------- 393 (697)
++ . .. +..+
T Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi 728 (1079)
T PLN02638 649 HKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFV 728 (1079)
T ss_pred ccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHH
Confidence 00 0 00 0000
Q ss_pred -------CCCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecC
Q 045732 394 -------YAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAP 466 (697)
Q Consensus 394 -------~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP 466 (697)
...+++.+.++++++|++|+||.||++|.||++.||.|+|+|||+.||++||++||||+|++++++++.|+||
T Consensus 729 ~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP 808 (1079)
T PLN02638 729 ASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAP 808 (1079)
T ss_pred HHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCC
Confidence 0112334677899999999999999999999999999999999999999999999999999877788999999
Q ss_pred CCHHHHHHHHHHHccCcchhhhhccCccccc-CCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCCh
Q 045732 467 ITLFDFINQYKRWAIGGLQMAFARYSPFTVG-TKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSE 544 (697)
Q Consensus 467 ~tl~~~l~Qr~RWa~G~lqi~~~~~~Pl~~~-~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~ 544 (697)
+|+.+++.||+||++|++|++++|+||+++| .++|++ ||++|++.++||+++++.++|+++|++||++|++++|+++.
T Consensus 809 ~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~ 888 (1079)
T PLN02638 809 INLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISN 888 (1079)
T ss_pred CCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccc
Confidence 9999999999999999999999999999976 378999 99999999999999999999999999999999999999989
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhh
Q 045732 545 PWFLLYVFMFLGAYGQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRY 624 (697)
Q Consensus 545 ~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~ 624 (697)
+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|.||+|..+++..
T Consensus 889 ~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~--- 965 (1079)
T PLN02638 889 IASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--- 965 (1079)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccccccc---
Confidence 98888888999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred hhccccccccccchHHHHHHHHHHHHHHHHhhhhhccCC--ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 625 ELEMFDFGVPSPMFVPLAMAAIINLFSFFLGLLKMVGGS--DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 625 ~~~~~~f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
..+.|+|+ ++++++|.++++++|++|+++|+++++.++ .++.+++++|.|+|+++++|||++||++|++|+|
T Consensus 966 ~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~~r~P 1039 (1079)
T PLN02638 966 FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTP 1039 (1079)
T ss_pred ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 24788998 689999999999999999999999987543 6889999999999999999999999999999998
No 3
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.1e-166 Score=1435.47 Aligned_cols=685 Identities=35% Similarity=0.648 Sum_probs=629.1
Q ss_pred CCccccccCCchhh--HHHHHHHHHHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRTAL--NRVFAAVYTCAIFGLLYHHVQ-IIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||+++++.|++.+ ||+++++++++++++++||++ ..+++.|+| +++++||+||+|+|+++|++||+|++|.++++
T Consensus 237 ~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W-~~s~~~E~wFaf~Wll~q~~kw~Pv~R~t~~d 315 (1040)
T PLN02189 237 QPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLW-LTSIICEIWFAVSWILDQFPKWFPIDRETYLD 315 (1040)
T ss_pred CCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHH-HHHHHHHHHHHHHHHHccCcccccccceeCHH
Confidence 48999999999964 999999999999999999999 555679999 99999999999999999999999999999999
Q ss_pred hhhc-cCCC---CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcc
Q 045732 79 NLLK-VMKP---SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWL 154 (697)
Q Consensus 79 ~l~~-~~~~---~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~ 154 (697)
+|.+ +.++ ++||.||||||||||++|||.+++|||+|+||.|||.|||+|||||||++.+|||+|.||++|||.||
T Consensus 316 rL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~Wv 395 (1040)
T PLN02189 316 RLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWV 395 (1040)
T ss_pred HHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhc
Confidence 9986 2222 34999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhh-ccCccccccccchhhhhhhccccCC
Q 045732 155 PFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVV-NTGKVSDEYITSDQEREAFNKWTDN 225 (697)
Q Consensus 155 pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~-~~~~~~~~~~~~~~~~~~f~~w~~~ 225 (697)
||||||||+|||||+|||.+. ++|++|+++||+||||||.||+.++ +++++|++.+. ++.+++|+++
T Consensus 396 PFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~----m~dGt~W~g~ 471 (1040)
T PLN02189 396 PFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWI----MQDGTPWPGN 471 (1040)
T ss_pred ccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccce----eccCccCCCC
Confidence 999999999999999999863 4899999999999999999999987 57888876543 3446789886
Q ss_pred CCcCCCccceeEeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcH
Q 045732 226 FSRYDHPAVIQVLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQT 305 (697)
Q Consensus 226 ~~~~~h~~~~~v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~ 305 (697)
.++|||+||||+.+++++.|.+|.++|+++||+||||||++||+||||||+++|+|+.+||||||+++||||++|||++
T Consensus 472 -~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~a 550 (1040)
T PLN02189 472 -NTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKA 550 (1040)
T ss_pred -CCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHH
Confidence 7899999999999998888889999999999999999999999999999999999999999999999999999998999
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCC--
Q 045732 306 PLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLI-- 383 (697)
Q Consensus 306 L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~-- 383 (697)
++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||++||+|+||||+|||+||++..++..
T Consensus 551 lr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~ 630 (1040)
T PLN02189 551 VREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPK 630 (1040)
T ss_pred HHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998743210
Q ss_pred ------------------CCCCCCCC--------------------------------------CCCCCCCCCCchhHHh
Q 045732 384 ------------------SPEIPELH--------------------------------------PNYAVDEPIQSPSILS 407 (697)
Q Consensus 384 ------------------~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~ 407 (697)
..+..+.. ++.......+..++++
T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~ 710 (1040)
T PLN02189 631 RPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLK 710 (1040)
T ss_pred cccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHH
Confidence 00000000 0011122345678999
Q ss_pred hhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhh
Q 045732 408 LAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMA 487 (697)
Q Consensus 408 ~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~ 487 (697)
+|++|+||.||++|.||++.||.|+|+|||+.||++||++||||+|++++++++.|+||+|+.+++.||+||++|++|++
T Consensus 711 eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~ 790 (1040)
T PLN02189 711 EAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIF 790 (1040)
T ss_pred HHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHh
Confidence 99999999999999999999999999999999999999999999999887889999999999999999999999999999
Q ss_pred hhccCcccccC--CCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHHHHHHHHHH
Q 045732 488 FARYSPFTVGT--KTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAYGQDFIE 564 (697)
Q Consensus 488 ~~~~~Pl~~~~--~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~~~~ll~ 564 (697)
++|+||+++|. ++|++ ||++|++.++|+++++|.++|+++|++||++|++++|+++.+++.+|+.+|+.++++.++|
T Consensus 791 ~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE 870 (1040)
T PLN02189 791 FSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGILE 870 (1040)
T ss_pred hccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999753 67999 9999999999999999999999999999999999999999999999988899999999999
Q ss_pred HHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccchHHHHHH
Q 045732 565 FVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMFVPLAMA 644 (697)
Q Consensus 565 ~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~P~~~l 644 (697)
++|+|.+.++|||+||+|+|.++++++++++++++|+||+++++|.||+|..+++.. ++.|+|+ ++++++|.+++
T Consensus 871 ~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~----~~ly~f~-~s~l~iP~ttl 945 (1040)
T PLN02189 871 LRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEF----GELYAFK-WTTLLIPPTTL 945 (1040)
T ss_pred HHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccccc----ccceeec-ceeHhHHHHHH
Confidence 999999999999999999999999999999999999999999999999998765432 3678898 68999999999
Q ss_pred HHHHHHHHHHhhhhhccCC--ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 645 AIINLFSFFLGLLKMVGGS--DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 645 ~~l~l~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
+++|++|+++|+++++.++ .++.+++++|.|+|+++++|||++||++|++|+|
T Consensus 946 ~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P 1000 (1040)
T PLN02189 946 LIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTP 1000 (1040)
T ss_pred HHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999987644 6889999999999999999999999999999998
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=9.8e-167 Score=1440.06 Aligned_cols=686 Identities=34% Similarity=0.644 Sum_probs=631.7
Q ss_pred CCccccccCCch--hhHHHHHHHHHHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRT--ALNRVFAAVYTCAIFGLLYHHVQ-IIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~--~~~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||++++++|++ .+||+++++++++++++++||++ ..+++.|+| +++++||+||+|+|+++|++||+|++|.++++
T Consensus 262 ~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~W-l~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~d 340 (1085)
T PLN02400 262 LPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLW-LTSVICEIWFALSWLLDQFPKWYPINRETYLD 340 (1085)
T ss_pred CCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHH-HHHHHHHHHHHHHHHHccCcccccccceeCHH
Confidence 589999999998 57999999999999999999999 555678889 99999999999999999999999999999999
Q ss_pred hhhc-cCC---CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcc
Q 045732 79 NLLK-VMK---PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWL 154 (697)
Q Consensus 79 ~l~~-~~~---~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~ 154 (697)
+|++ +.+ +++||.||||||||||++|||.+++|||+|+||.|||.|||+|||||||++.+|||+|.||++|||.||
T Consensus 341 rL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~Wv 420 (1085)
T PLN02400 341 RLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWV 420 (1085)
T ss_pred HHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhc
Confidence 9986 222 246999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhh-ccCccccccccchhhhhhhccccCC
Q 045732 155 PFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVV-NTGKVSDEYITSDQEREAFNKWTDN 225 (697)
Q Consensus 155 pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~-~~~~~~~~~~~~~~~~~~f~~w~~~ 225 (697)
||||||+|+|||||+|||.+. ++|++|+++||+||||||.|||+++ +++++|++.++ ++.|++|+++
T Consensus 421 PFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~----m~dgt~W~g~ 496 (1085)
T PLN02400 421 PFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWT----MQDGTPWPGN 496 (1085)
T ss_pred chhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccc----cccCccCCCC
Confidence 999999999999999999853 4899999999999999999999987 58888887643 3457899886
Q ss_pred CCcCCCccceeEeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcH
Q 045732 226 FSRYDHPAVIQVLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQT 305 (697)
Q Consensus 226 ~~~~~h~~~~~v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~ 305 (697)
+++|||+||||++++.++.|.+|.++|+++||+||||||++||+||||||+++|+|+.+||+|||+++||||++|||++
T Consensus 497 -~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a 575 (1085)
T PLN02400 497 -NPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKA 575 (1085)
T ss_pred -CCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchh
Confidence 7889999999999999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCC
Q 045732 306 PLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISP 385 (697)
Q Consensus 306 L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~ 385 (697)
++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||++||+|+||||+|||+||++..++...+
T Consensus 576 ~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~ 655 (1085)
T PLN02400 576 LKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEE 655 (1085)
T ss_pred HHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999874421100
Q ss_pred C--------------------------C-------------------CC-----------------CCC-----------
Q 045732 386 E--------------------------I-------------------PE-----------------LHP----------- 392 (697)
Q Consensus 386 ~--------------------------~-------------------~~-----------------~~~----------- 392 (697)
+ . ++ +..
T Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S 735 (1085)
T PLN02400 656 DLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAA 735 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHH
Confidence 0 0 00 000
Q ss_pred ----CCCCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCC
Q 045732 393 ----NYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPIT 468 (697)
Q Consensus 393 ----~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~t 468 (697)
+...+++.+.++++++|++|+||.||++|.||++.||.|+|+|||+.||++||++||||+|++++++++.|+||+|
T Consensus 736 ~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~ 815 (1085)
T PLN02400 736 TFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 815 (1085)
T ss_pred HHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCC
Confidence 0011233467889999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHHccCcchhhhhccCccccc-CCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhH
Q 045732 469 LFDFINQYKRWAIGGLQMAFARYSPFTVG-TKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPW 546 (697)
Q Consensus 469 l~~~l~Qr~RWa~G~lqi~~~~~~Pl~~~-~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~ 546 (697)
+.+++.||+||++|++|++++|+||+++| .++|++ ||++|++.++||++++|.++|+++|++||++|++++|.++.++
T Consensus 816 l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~ 895 (1085)
T PLN02400 816 LSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYA 895 (1085)
T ss_pred HHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHH
Confidence 99999999999999999999999999876 488999 9999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhh
Q 045732 547 FLLYVFMFLGAYGQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYEL 626 (697)
Q Consensus 547 ~~~~~~~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~ 626 (697)
+++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|.||+|..+++.. + .
T Consensus 896 ~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~~--~-~ 972 (1085)
T PLN02400 896 SMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--F-A 972 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCccccccc--c-c
Confidence 999998899999999999999999999999999999999999999999999999999999999999998764331 2 4
Q ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhhccCC--ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 627 EMFDFGVPSPMFVPLAMAAIINLFSFFLGLLKMVGGS--DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 627 ~~~~f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
++|+|+ ++++++|+++++++|++|+++|+++++.++ .++.+++++|.|+|+++++|||++||++|++|+|
T Consensus 973 ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~~r~P 1044 (1085)
T PLN02400 973 ELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTP 1044 (1085)
T ss_pred ceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Confidence 788998 689999999999999999999999987643 7889999999999999999999999999999998
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=4.8e-166 Score=1423.89 Aligned_cols=685 Identities=35% Similarity=0.631 Sum_probs=627.8
Q ss_pred CCccccccCCchhh--HHHHHHHHHHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRTAL--NRVFAAVYTCAIFGLLYHHVQ-IIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||+++++.|++.+ ||+++++++++++++++||++ ..+++.|+| +++++||+||+|+|+++|++||+|++|+++++
T Consensus 158 ~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W-l~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~d 236 (977)
T PLN02195 158 EPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDSAFGLW-LTSVICEIWFAFSWVLDQFPKWSPINRETYID 236 (977)
T ss_pred CCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccccchHHH-HHHHHHHHHHHHHHHHhcccccccccceECHH
Confidence 58999999999964 999999999999999999999 555667899 99999999999999999999999999999999
Q ss_pred hhhc-cCC---CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcc
Q 045732 79 NLLK-VMK---PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWL 154 (697)
Q Consensus 79 ~l~~-~~~---~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~ 154 (697)
+|.+ +.+ +++||.|||||+||||++|||.+++|||+|+||.|||.|||+|||||||++.+|||+|.||++|||.||
T Consensus 237 rL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~Wv 316 (977)
T PLN02195 237 RLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWV 316 (977)
T ss_pred HHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhc
Confidence 9986 222 256999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhhc-cCccccccccchhhhhhhccccCC
Q 045732 155 PFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVVN-TGKVSDEYITSDQEREAFNKWTDN 225 (697)
Q Consensus 155 pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~~-~~~~~~~~~~~~~~~~~f~~w~~~ 225 (697)
||||||||+|||||+|||++. ++|++|+++||+||||||.|||++++ +++++++.++ ++.|++|+++
T Consensus 317 PFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~----m~d~t~W~g~ 392 (977)
T PLN02195 317 PFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWT----MQDGTPWPGN 392 (977)
T ss_pred ccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccc----ccCCccCCCC
Confidence 999999999999999999853 48999999999999999999999986 4788877542 3567899886
Q ss_pred CCcCCCccceeEeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcH
Q 045732 226 FSRYDHPAVIQVLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQT 305 (697)
Q Consensus 226 ~~~~~h~~~~~v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~ 305 (697)
+++|||+||||+.+++++.|.+|.++|+++||+||||||++||+||||||+++|+|+.+||+|||+++||||++|+|++
T Consensus 393 -~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~ 471 (977)
T PLN02195 393 -NTRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKA 471 (977)
T ss_pred -CCCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHH
Confidence 7889999999999998888889999999999999999999999999999999999999999999999999999998899
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCC--
Q 045732 306 PLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLI-- 383 (697)
Q Consensus 306 L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~-- 383 (697)
++++||||.||+.++++|+||+||+|+|++++|+|++++++||+++++|+||++||+|+||||+|||+||++..++..
T Consensus 472 lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~ 551 (977)
T PLN02195 472 VREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPR 551 (977)
T ss_pred HHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998743221
Q ss_pred -------C-------CCCCCC---------------------------C--------------CC---------------
Q 045732 384 -------S-------PEIPEL---------------------------H--------------PN--------------- 393 (697)
Q Consensus 384 -------~-------~~~~~~---------------------------~--------------~~--------------- 393 (697)
. ++..+. . .+
T Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~ 631 (977)
T PLN02195 552 LPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMEN 631 (977)
T ss_pred ccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHh
Confidence 0 000000 0 00
Q ss_pred CCCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHH
Q 045732 394 YAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFI 473 (697)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l 473 (697)
...+...+..+++++|++|+||.||++|.||++.||.|+|+|||+.||++||++||||+|++++++++.|+||+|+.+++
T Consensus 632 ~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L 711 (977)
T PLN02195 632 GGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRL 711 (977)
T ss_pred cCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHH
Confidence 00122335678999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHccCcchhhhhccCcccccC--CCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHH
Q 045732 474 NQYKRWAIGGLQMAFARYSPFTVGT--KTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLY 550 (697)
Q Consensus 474 ~Qr~RWa~G~lqi~~~~~~Pl~~~~--~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~ 550 (697)
.||+||++|++|++++|+||+++|. ++|++ ||++|++.++|+++++|.++|+++|++||++|++++|+++.+++++|
T Consensus 712 ~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f 791 (977)
T PLN02195 712 HQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLF 791 (977)
T ss_pred HHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHH
Confidence 9999999999999999999999753 78999 99999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhcccc
Q 045732 551 VFMFLGAYGQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFD 630 (697)
Q Consensus 551 ~~~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~ 630 (697)
+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|.||+|..+++.. .+.|+
T Consensus 792 ~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~~----~~~Y~ 867 (977)
T PLN02195 792 LGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTEF----GELYM 867 (977)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccch----hccee
Confidence 88999999999999999999999999999999999999999999999999999999999999998765321 24567
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhccCC--ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 631 FGVPSPMFVPLAMAAIINLFSFFLGLLKMVGGS--DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 631 f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
|+ +|++++|.++++++|++|+++|+++++.++ .++.+++++|.|+|+++++|||++||++|++|+|
T Consensus 868 f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P 935 (977)
T PLN02195 868 VK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTP 935 (977)
T ss_pred cc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 87 689999999999999999999999987654 6888999999999999999999999999999998
No 6
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1e-165 Score=1425.63 Aligned_cols=685 Identities=34% Similarity=0.642 Sum_probs=627.9
Q ss_pred CCccccccCCchhh--HHHHHHHHHHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRTAL--NRVFAAVYTCAIFGLLYHHVQ-IIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||+++++.|++.+ ||+++++++++++++++||++ ..+++.|+| +++++||+||+|+|+++|++||+|++|.++++
T Consensus 271 ~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~W-l~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~d 349 (1094)
T PLN02436 271 QPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLW-LTSVICEIWFAVSWILDQFPKWYPIERETYLD 349 (1094)
T ss_pred CCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHH-HHHHHHHHHHHHHHHHccCcccccccceeCHH
Confidence 48999999999964 999999999999999999999 555678899 99999999999999999999999999999999
Q ss_pred hhhc-cCC---CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcc
Q 045732 79 NLLK-VMK---PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWL 154 (697)
Q Consensus 79 ~l~~-~~~---~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~ 154 (697)
+|.+ +.+ +++||.|||||+||||++|||.+++|||+|+||.|||.|||+|||||||++.+|||+|.||++|||.||
T Consensus 350 rL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~Wv 429 (1094)
T PLN02436 350 RLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWV 429 (1094)
T ss_pred HHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhc
Confidence 9986 222 246999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhhcc-CccccccccchhhhhhhccccCC
Q 045732 155 PFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVVNT-GKVSDEYITSDQEREAFNKWTDN 225 (697)
Q Consensus 155 pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~~~-~~~~~~~~~~~~~~~~f~~w~~~ 225 (697)
||||||||+|||||+|||.+. ++|++|+++||+||||||.|||++++. +++|++.++ ++.+.+|+++
T Consensus 430 PFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~----m~dgt~W~g~ 505 (1094)
T PLN02436 430 PFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWT----MQDGTPWPGN 505 (1094)
T ss_pred ccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhh----hccCccCCCC
Confidence 999999999999999999853 489999999999999999999999874 889987643 3456799886
Q ss_pred CCcCCCccceeEeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcH
Q 045732 226 FSRYDHPAVIQVLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQT 305 (697)
Q Consensus 226 ~~~~~h~~~~~v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~ 305 (697)
+++|||+||||++++.++.|.+|.++|+++||+||||||++||+||||||+++|+|+.+||+|||+++||||+.|||++
T Consensus 506 -~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a 584 (1094)
T PLN02436 506 -NVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKA 584 (1094)
T ss_pred -CCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHH
Confidence 7889999999999998888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCC-C
Q 045732 306 PLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLI-S 384 (697)
Q Consensus 306 L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~-~ 384 (697)
++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||++||+|+||||+|||+||++..++.. .
T Consensus 585 ~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~ 664 (1094)
T PLN02436 585 LREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKK 664 (1094)
T ss_pred HHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998743210 0
Q ss_pred --------------------CC-------C-----------C-----C--------------------CCCCC-------
Q 045732 385 --------------------PE-------I-----------P-----E--------------------LHPNY------- 394 (697)
Q Consensus 385 --------------------~~-------~-----------~-----~--------------------~~~~~------- 394 (697)
++ . + + +..++
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi 744 (1094)
T PLN02436 665 PPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFV 744 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHH
Confidence 00 0 0 0 00001
Q ss_pred --------CCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecC
Q 045732 395 --------AVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAP 466 (697)
Q Consensus 395 --------~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP 466 (697)
.++.+.+.++++++|++|+||.||++|.||++.||.|+|+|||+.||++||++||||+|++++++++.|+||
T Consensus 745 ~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP 824 (1094)
T PLN02436 745 ASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAP 824 (1094)
T ss_pred HHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCC
Confidence 112234577899999999999999999999999999999999999999999999999999877788999999
Q ss_pred CCHHHHHHHHHHHccCcchhhhhccCccccc-CCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCCh
Q 045732 467 ITLFDFINQYKRWAIGGLQMAFARYSPFTVG-TKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSE 544 (697)
Q Consensus 467 ~tl~~~l~Qr~RWa~G~lqi~~~~~~Pl~~~-~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~ 544 (697)
+|+.+++.||+||++|++|++++|+||+++| .++|++ ||++|++.++|+++++|.++|+++|++||++|++++|+++.
T Consensus 825 ~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~ 904 (1094)
T PLN02436 825 INLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISN 904 (1094)
T ss_pred CCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCccch
Confidence 9999999999999999999999999999875 368999 99999999999999999999999999999999999999989
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhh
Q 045732 545 PWFLLYVFMFLGAYGQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRY 624 (697)
Q Consensus 545 ~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~ 624 (697)
+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++|+++++++|+||+++++|.||+|..+++. +
T Consensus 905 ~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~---~ 981 (1094)
T PLN02436 905 YASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGE---F 981 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccccccc---c
Confidence 9999999899999999999999999999999999999999999999999999999999999999999999876431 1
Q ss_pred hhccccccccccchHHHHHHHHHHHHHHHHhhhhhccCC--ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 625 ELEMFDFGVPSPMFVPLAMAAIINLFSFFLGLLKMVGGS--DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 625 ~~~~~~f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
.+.|+|+ ++++++|+++++++|++|+++|+.+++.++ .++.+++++|.|+|+++++|||++||++|++|+|
T Consensus 982 -a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr~~r~P 1054 (1094)
T PLN02436 982 -SELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRMP 1054 (1094)
T ss_pred -cceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 1456787 688999999999999999999999987644 6899999999999999999999999999999988
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=9.3e-164 Score=1411.52 Aligned_cols=687 Identities=34% Similarity=0.627 Sum_probs=626.1
Q ss_pred CCccccccCCchhh--HHHHHHHHHHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRTAL--NRVFAAVYTCAIFGLLYHHVQ-IIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||+++++.|++.+ ||+++++++++++++++||++ ..+++.|+| +++++||+||+|+|+++|++||+|++|.++++
T Consensus 193 ~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~W-l~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~d 271 (1044)
T PLN02915 193 QPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLW-LISVICEIWFALSWILDQFPKWFPINRETYLD 271 (1044)
T ss_pred CCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHH-HHHHHHHHHHHHHHHHccCccccccccccCHH
Confidence 58999999999964 999999999999999999999 445568899 99999999999999999999999999999999
Q ss_pred hhhc-cCCC---CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcc
Q 045732 79 NLLK-VMKP---SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWL 154 (697)
Q Consensus 79 ~l~~-~~~~---~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~ 154 (697)
+|.+ +.++ ++||.|||||+||||++|||.+++|||+|+||+|||.|||+|||||||++.+|||+|.||++|||.||
T Consensus 272 rL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~Wv 351 (1044)
T PLN02915 272 RLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWV 351 (1044)
T ss_pred HHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhc
Confidence 9985 2222 34999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhhc-cCccccccccchhhhhhhccccCC
Q 045732 155 PFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVVN-TGKVSDEYITSDQEREAFNKWTDN 225 (697)
Q Consensus 155 pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~~-~~~~~~~~~~~~~~~~~f~~w~~~ 225 (697)
||||||||+|||||+|||++. ++|++|+++||+||||||.|||++++ ++++|++.++ ++.|++|+++
T Consensus 352 PFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~----m~dgt~W~g~ 427 (1044)
T PLN02915 352 PFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWV----MQDGTPWPGN 427 (1044)
T ss_pred chhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccc----ccCCccCCCC
Confidence 999999999999999999863 48999999999999999999999986 4888877542 3457899987
Q ss_pred CCcCCCccceeEeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcH
Q 045732 226 FSRYDHPAVIQVLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQT 305 (697)
Q Consensus 226 ~~~~~h~~~~~v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~ 305 (697)
.+ +|||+||||++++.++.|.+|.++|+++||+||||||++||+||||||+.+|+|+.+||+|||+++||||+.|||++
T Consensus 428 ~~-~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a 506 (1044)
T PLN02915 428 NT-RDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKA 506 (1044)
T ss_pred CC-CCCccceEEeecCCCCcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchh
Confidence 65 79999999999998888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCC-
Q 045732 306 PLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLIS- 384 (697)
Q Consensus 306 L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~- 384 (697)
++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||++||+|+||||+|||+||++..++...
T Consensus 507 ~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~ 586 (1044)
T PLN02915 507 VREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEK 586 (1044)
T ss_pred hHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997543210
Q ss_pred ------CCCCC--------------------------C------------------------------------------
Q 045732 385 ------PEIPE--------------------------L------------------------------------------ 390 (697)
Q Consensus 385 ------~~~~~--------------------------~------------------------------------------ 390 (697)
+..++ +
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1044)
T PLN02915 587 RPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEG 666 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000 0
Q ss_pred ---------------C---------------CCCCCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHH
Q 045732 391 ---------------H---------------PNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYT 440 (697)
Q Consensus 391 ---------------~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t 440 (697)
. +....++..+.++++++|++|+||.||++|.||++.||.|+|+|||+.|
T Consensus 667 ~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~T 746 (1044)
T PLN02915 667 YDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILT 746 (1044)
T ss_pred ccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHH
Confidence 0 0001122335678999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhhhhccCccccc-CCCchH-HHHHHHHHHHHHhhH
Q 045732 441 GYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMAFARYSPFTVG-TKTIGL-MGLAYGHYAIWPIWC 518 (697)
Q Consensus 441 ~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~Pl~~~-~~~l~~-qrl~y~~~~~~~l~~ 518 (697)
|++||++||||+|++++++++.|+||+|+.++++||+||++|++|++++++||++++ .++|++ ||++|++.++|++.+
T Consensus 747 G~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~s 826 (1044)
T PLN02915 747 GFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTS 826 (1044)
T ss_pred HHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999998877889999999999999999999999999999999999964 378999 999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHH
Q 045732 519 IPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAYGQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYL 598 (697)
Q Consensus 519 ~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l 598 (697)
++.++|+++|++||++|++++|.++.....+++++|++++++++++++|+|.++++|||+||+|+|.+++++++++++++
T Consensus 827 lp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~i 906 (1044)
T PLN02915 827 IPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGL 906 (1044)
T ss_pred HHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998776666666677889999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccchHHHHHHHHHHHHHHHHhhhhhccC--CChhHHHHHHHHHH
Q 045732 599 LKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMFVPLAMAAIINLFSFFLGLLKMVGG--SDKEGLVLQMLIAG 676 (697)
Q Consensus 599 ~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~--~~~~~~~~~~~~~~ 676 (697)
+|+||+++++|+||+|..+++.++ + .+.|+|+ ++++++|.++++++|++|+++|+++++.+ +.++.++++++.++
T Consensus 907 LKvLg~se~~F~VTsK~~d~~~d~-~-~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~ 983 (1044)
T PLN02915 907 LKVLGGVDTNFTVTSKAADDEADE-F-GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAF 983 (1044)
T ss_pred HHHhcccCCcceecCCccccchhh-h-ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 999999999999999987654332 2 3678888 78999999999999999999999998754 46788999999999
Q ss_pred HHHHHHHHHHHHhHhcccCCC
Q 045732 677 FIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 677 ~~l~~l~p~~~~l~~r~~~~~ 697 (697)
|++++++||++||++|++|+|
T Consensus 984 wvvv~lyPf~kgLmgR~~r~P 1004 (1044)
T PLN02915 984 WVIVHLYPFLKGLMGRQNRTP 1004 (1044)
T ss_pred HHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999998
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.1e-162 Score=1401.54 Aligned_cols=690 Identities=32% Similarity=0.576 Sum_probs=611.8
Q ss_pred CCccccccCCchhh--HHHHHHHHHHHHHHHHHHHhhcc-CCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCch
Q 045732 2 WPLNTTEPLRRTAL--NRVFAAVYTCAIFGLLYHHVQII-HSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPE 78 (697)
Q Consensus 2 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~yl~~R~~~~-~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~ 78 (697)
.||+++++.|++.+ ||+++++++++++++|+||++.+ .++.|+| +++++||+||+|+|+++|+.||+|++|.++++
T Consensus 268 ~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W-~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t~~~ 346 (1135)
T PLN02248 268 RPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLW-GMSVVCEIWFAFSWLLDQLPKLCPINRATDLA 346 (1135)
T ss_pred CCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHH-HHHHHHHHHHHHHHHHhccccccccccccCHH
Confidence 48999999999964 99999999999999999999954 4678999 99999999999999999999999999999999
Q ss_pred hhhcc-CC--------CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHh
Q 045732 79 NLLKV-MK--------PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKF 149 (697)
Q Consensus 79 ~l~~~-~~--------~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~f 149 (697)
+|.+. +. +++||.||||||||||++|||.+++|||+|+||.|||.|||.|||+|||++.+|||+|.||++|
T Consensus 347 rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EAa~F 426 (1135)
T PLN02248 347 VLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAEAASF 426 (1135)
T ss_pred HHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 99862 21 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccCcccCCccccccccc--------ccCChhHHHHHHHHHHHHHHHhhhhccCccc-cccccc---hhh--
Q 045732 150 ARHWLPFCRKNNVLETNPETYFSLNH--------AACCPETQQIEMMYRNMKVRVADVVNTGKVS-DEYITS---DQE-- 215 (697)
Q Consensus 150 a~~w~pfc~k~~v~~~~p~~yf~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~-~~~~~~---~~~-- 215 (697)
||.||||||||||||||||+||+.+. ++|++|+++||+||||||.|||++++.++.+ +.|-.. +++
T Consensus 427 A~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~~~~ 506 (1135)
T PLN02248 427 ARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKAKKK 506 (1135)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHHhhhh
Confidence 99999999999999999999999853 4899999999999999999999997655443 111000 000
Q ss_pred -hh--hh-----------------c----cccC---CCCcCCCccceeEeecCCC------------CCCC--CCCCcCe
Q 045732 216 -RE--AF-----------------N----KWTD---NFSRYDHPAVIQVLIDNGK------------DEDT--TGHFLPN 254 (697)
Q Consensus 216 -~~--~f-----------------~----~w~~---~~~~~~h~~~~~v~~~~~~------------~~~~--~~~~~p~ 254 (697)
++ +| . .|.+ +|+++|||+||||+.++++ +.|. .|.++|+
T Consensus 507 ~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~ 586 (1135)
T PLN02248 507 QRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPM 586 (1135)
T ss_pred hhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccccccce
Confidence 11 22 2 2333 5899999999999998654 1232 3448999
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccC
Q 045732 255 LIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGL 334 (697)
Q Consensus 255 l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~ 334 (697)
++||+||||||++||+||||||+.+|+|+.+||||||+++||||++|||++++++||||+||+ ++++||||+||+|+|+
T Consensus 587 LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I 665 (1135)
T PLN02248 587 LVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGI 665 (1135)
T ss_pred eEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999997 8899999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCC-------------CCCC-------------
Q 045732 335 SSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLIS-------------PEIP------------- 388 (697)
Q Consensus 335 ~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~-------------~~~~------------- 388 (697)
+++|+|+|++++||+++++|+||++||+||||||+|||+||++..++... ...+
T Consensus 666 ~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1135)
T PLN02248 666 DPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDL 745 (1135)
T ss_pred CCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999997443210 0000
Q ss_pred ----CC-----CCCCCC-----------------------------------CCCCCchhHHhhhccccccccccccccc
Q 045732 389 ----EL-----HPNYAV-----------------------------------DEPIQSPSILSLAHHVASCNYENRTNWG 424 (697)
Q Consensus 389 ----~~-----~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~ye~~t~wg 424 (697)
++ ..++.. +......+++++|++|+||.||++|.||
T Consensus 746 ~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG 825 (1135)
T PLN02248 746 EDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWG 825 (1135)
T ss_pred cccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCCchh
Confidence 00 000000 0112355789999999999999999999
Q ss_pred cccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhhhhccCcccccCCCchH-
Q 045732 425 SKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMAFARYSPFTVGTKTIGL- 503 (697)
Q Consensus 425 ~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~Pl~~~~~~l~~- 503 (697)
++.||.|+|+|||+.||++||++||||+||+++++++.|+||+|+.++++||+||++|++||+++|++|++.+ ++|++
T Consensus 826 ~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~ 904 (1135)
T PLN02248 826 DRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFL 904 (1135)
T ss_pred hhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHH
Confidence 9999999999999999999999999999998777899999999999999999999999999999999998864 78999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHH-HHHHHHHHHHHHHHHhCCcccccchhhhhH
Q 045732 504 MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVF-MFLGAYGQDFIEFVLEGGTFGKWWNDQRMW 582 (697)
Q Consensus 504 qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~-~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w 582 (697)
||++|++.++|++.+++.++|+++|++||++|++++|+. .++|++|++ +++.++++.++|++|+|.+.++|||+||+|
T Consensus 905 QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W 983 (1135)
T PLN02248 905 QRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFW 983 (1135)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhhee
Confidence 999999999999999999999999999999999999976 567766663 457789999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccchHHHHHHHHHHHHHHHHhhhhhccC
Q 045732 583 MIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMFVPLAMAAIINLFSFFLGLLKMVGG 662 (697)
Q Consensus 583 ~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~ 662 (697)
+|.++++++++++++++|+||+++++|+||+|+.+++.+++| .+.|+|+ ++++++|+++++++|++|+++|++|++.+
T Consensus 984 ~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g 1061 (1135)
T PLN02248 984 LIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYS 1061 (1135)
T ss_pred eehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999877666677 4789998 68899999999999999999999999866
Q ss_pred --CChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 663 --SDKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 663 --~~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
+.++.+++++|.++|+++++|||++||++||+|+|
T Consensus 1062 ~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P 1098 (1135)
T PLN02248 1062 EIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTP 1098 (1135)
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 35788999999999999999999999999999998
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=3.5e-161 Score=1359.74 Aligned_cols=671 Identities=30% Similarity=0.516 Sum_probs=600.8
Q ss_pred CCccccccCCchhhHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCchhhh
Q 045732 2 WPLNTTEPLRRTALNRVFAAVYTCAIFGLLYHHVQIIHSRTPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPENLL 81 (697)
Q Consensus 2 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~ 81 (697)
.||||+++.|++. +|++.++++++++.|++||++.+.+..+.| +++++||+|++++|+++|+.+|+|++|.++|++|+
T Consensus 9 ~pL~~~~~~~~~~-~r~~~~~vl~~~~~~l~~R~~~~~~~~~~W-~~~~~~E~wf~~~WlL~q~~kw~pv~r~~~p~~l~ 86 (756)
T PLN02190 9 PPLCERISHKSYF-LRAVDLTILGLLFSLLLYRILHMSENDTVW-LVAFLCESCFSFVWLLITCIKWSPAEYKPYPDRLD 86 (756)
T ss_pred CCceeeeeccchh-HHHHHHHHHHHHHHHHHHHHhCCCcccHHH-HHHHHHHHHHHHHHHHhccceeeecCCCCCcHHHH
Confidence 5899999999997 999999999999999999999444434789 88999999999999999999999999999999998
Q ss_pred ccCCCCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccC
Q 045732 82 KVMKPSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNN 161 (697)
Q Consensus 82 ~~~~~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~ 161 (697)
+ +.+++|+||||||||||++|||.+|+|||+|++++|||+||++|||+|||++++|||+|.||++|||.|||||||||
T Consensus 87 ~--r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~ 164 (756)
T PLN02190 87 E--RVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYN 164 (756)
T ss_pred H--hhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccC
Confidence 7 44579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccccc-----ccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCcccee
Q 045732 162 VLETNPETYFSLNH-----AACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQ 236 (697)
Q Consensus 162 v~~~~p~~yf~~~~-----~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~ 236 (697)
|+|||||+||+.+. ++|.+|+++||+||||||+||++++. ++...+. +++ ++.|+ +++++|||+|||
T Consensus 165 IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~-~~~~~~~---~~~---~~~~~-~~~~~dH~~iiq 236 (756)
T PLN02190 165 VRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATG-DSHWLDA---EDD---FEAFS-NTKPNDHSTIVK 236 (756)
T ss_pred CCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhcc-CCCCccc---CCc---ccccC-CCCCCCCccceE
Confidence 99999999999732 68999999999999999999999863 4443322 122 23444 489999999999
Q ss_pred EeecCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCC
Q 045732 237 VLIDNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNP 316 (697)
Q Consensus 237 v~~~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp 316 (697)
|+.|++++ +.+|+++|+++||+|||||+++||+||||||+.+|+|+.+||+|||+++||||+.|||++++++||||+|+
T Consensus 237 Vll~~~~~-~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~ 315 (756)
T PLN02190 237 VVWENKGG-VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQK 315 (756)
T ss_pred EEecCCCC-ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCC
Confidence 99999554 34688999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CcEEEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCC-C--------
Q 045732 317 VTR-SNLSFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISP-E-------- 386 (697)
Q Consensus 317 ~~~-~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~-~-------- 386 (697)
+.+ +++||||+||+|+ |+|+|++++||++.++|+||++||+|+||||+|||+||++..|+.... .
T Consensus 316 ~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~ 390 (756)
T PLN02190 316 SKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATR 390 (756)
T ss_pred CCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccccc
Confidence 644 5899999999998 579999999999999999999999999999999999999975433211 0
Q ss_pred --CCC--CCCCCCCC----------------CCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHh
Q 045732 387 --IPE--LHPNYAVD----------------EPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHC 446 (697)
Q Consensus 387 --~~~--~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~ 446 (697)
..+ +..++..+ .+.+..+++++|++|+||.||++|.||++.||.|+|+|||+.||++||+
T Consensus 391 ~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~ 470 (756)
T PLN02190 391 EFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHS 470 (756)
T ss_pred cccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHc
Confidence 011 11112211 1234568999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhhhhccCccccc-CCCchH-HHHHHHHHHHHHhhHHHHHHH
Q 045732 447 EGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMAFARYSPFTVG-TKTIGL-MGLAYGHYAIWPIWCIPTLVY 524 (697)
Q Consensus 447 ~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~Pl~~~-~~~l~~-qrl~y~~~~~~~l~~~~~l~~ 524 (697)
+||||+||+++++++.|.+|+++.+.+.||+||++|++|++++|+||++.+ .++|++ ||++|++.++ |++++|+++|
T Consensus 471 rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y 549 (756)
T PLN02190 471 RGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIY 549 (756)
T ss_pred cCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999888999999999999999999999999999999999999874 589999 9999999877 9999999999
Q ss_pred HHHHHHHHHhCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcC
Q 045732 525 ALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAYGQDFIEFVLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGI 604 (697)
Q Consensus 525 ~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~ 604 (697)
+++|++||++|++++|+. +++.+++++++.+++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+
T Consensus 550 ~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~ 627 (756)
T PLN02190 550 CLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGI 627 (756)
T ss_pred HHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhcc
Confidence 999999999999999964 577778778888999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeCCCCCC-------------ccchhhhhhccccccccccchHHHHHHHHHHHHHHHHhhhhhccC-----CChh
Q 045732 605 SAFGFNVTSKVLD-------------NDQSKRYELEMFDFGVPSPMFVPLAMAAIINLFSFFLGLLKMVGG-----SDKE 666 (697)
Q Consensus 605 ~~~~F~VT~K~~~-------------~~~~~~~~~~~~~f~~~~~l~~P~~~l~~l~l~a~~~g~~~~~~~-----~~~~ 666 (697)
++++|+||.|..+ ++++++|++++|+|+ +|++++|.++++++|++|++.|+++++.+ +.++
T Consensus 628 s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~ 706 (756)
T PLN02190 628 SKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGS 706 (756)
T ss_pred ccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccc
Confidence 9999999999754 334578889999998 69999999999999999999999987532 3344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhcccCC
Q 045732 667 GLVLQMLIAGFIMVNCWPIYEAMVLRSDAC 696 (697)
Q Consensus 667 ~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~ 696 (697)
.+++++.|+|++++++||+|||+ ||||+
T Consensus 707 -~l~q~~~~~~vv~~~~P~~~gl~-~kdkg 734 (756)
T PLN02190 707 -GLAEACGCILVVMLFLPFLKGLF-EKGKY 734 (756)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 45999999999999999999998 88774
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.3e-150 Score=1271.28 Aligned_cols=598 Identities=44% Similarity=0.828 Sum_probs=552.7
Q ss_pred eeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccc
Q 045732 92 LDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYF 171 (697)
Q Consensus 92 VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf 171 (697)
||||||||||++|||.+++|||+|++|+|||.|||+|||+|||++++|||+|.||++|||.||||||||+|+|||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc--------ccCChhHHHHHHHHHHHHHHHhhhhc-cCccccccccchhhhhhhccccCCCCcCCCccceeEeecCC
Q 045732 172 SLNH--------AACCPETQQIEMMYRNMKVRVADVVN-TGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNG 242 (697)
Q Consensus 172 ~~~~--------~~~~~e~~~~~~~y~~l~~ri~~~~~-~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~ 242 (697)
+.+. ++|++|+++||++|||||.|||.+++ .+++|++.+++.+ +++|++ ++++|||+||||+.+++
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~----~~~w~~-~~~~dH~~iiqv~~~~~ 155 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQD----GTPWPG-NTRRDHPGIIQVLLDNP 155 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccC----CCcCCC-CCCcCChhheEeeccCC
Confidence 9863 58999999999999999999999875 5667877654443 378986 69999999999999999
Q ss_pred CCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcE
Q 045732 243 KDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNL 322 (697)
Q Consensus 243 ~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v 322 (697)
++.|.+|+++|+++||+|||||+++||+||||||+++|+|+.+||+|||+++||||+.|||++++++||||+||+.++++
T Consensus 156 ~~~~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~ 235 (720)
T PF03552_consen 156 GGKDVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKI 235 (720)
T ss_pred CCcccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCC-----------------
Q 045732 323 SFVQFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISP----------------- 385 (697)
Q Consensus 323 ~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~----------------- 385 (697)
|+||+||+|+|++++|+|+|+.++||+++++|+||++||+|+||||+|||+||++..++....
T Consensus 236 ~~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k 315 (720)
T PF03552_consen 236 AFVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRK 315 (720)
T ss_pred EEEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcc
Confidence 999999999999999999999999999999999999999999999999999999986532100
Q ss_pred --------CC---------------CCCC--------------------CC---------------CCCCCCCCchhHHh
Q 045732 386 --------EI---------------PELH--------------------PN---------------YAVDEPIQSPSILS 407 (697)
Q Consensus 386 --------~~---------------~~~~--------------------~~---------------~~~~~~~~~~~~~~ 407 (697)
.. ++.. .+ ...+++.++.++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~ 395 (720)
T PF03552_consen 316 KKKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLE 395 (720)
T ss_pred cccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHH
Confidence 00 0000 00 11223557789999
Q ss_pred hhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhh
Q 045732 408 LAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMA 487 (697)
Q Consensus 408 ~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~ 487 (697)
+|++|+||.||++|.||++.||.|+|+|||+.||++||++||||+||.+++++|.|.||+|+.+.+.|++||+.|++||+
T Consensus 396 EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~ 475 (720)
T PF03552_consen 396 EAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIF 475 (720)
T ss_pred HHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCccccc-CCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHHHHHHHHHHH
Q 045732 488 FARYSPFTVG-TKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAYGQDFIEF 565 (697)
Q Consensus 488 ~~~~~Pl~~~-~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~~~~ll~~ 565 (697)
++|+||+++| .++|++ ||++|++.++|+++++|.++|+++|++||++|++++|+++.+++++|+.+|+++++++++|+
T Consensus 476 fSr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~ 555 (720)
T PF03552_consen 476 FSRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEF 555 (720)
T ss_pred hhcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHH
Confidence 9999999986 589999 99999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccchHHHHHHH
Q 045732 566 VLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMFVPLAMAA 645 (697)
Q Consensus 566 ~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~P~~~l~ 645 (697)
+|+|.++++|||+||+|+|.++++++++++++++|++|+++++|.||+|..++++.+.+ +.|.|++ +++++|.++++
T Consensus 556 ~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~w-S~LfiP~tTll 632 (720)
T PF03552_consen 556 RWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFKW-SPLFIPPTTLL 632 (720)
T ss_pred HhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--ccccccc-cchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999875544433 4677764 78999999999
Q ss_pred HHHHHHHHHhhhhhccC--CChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCCC
Q 045732 646 IINLFSFFLGLLKMVGG--SDKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDACP 697 (697)
Q Consensus 646 ~l~l~a~~~g~~~~~~~--~~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~~ 697 (697)
++|++|+++|+++.+.+ ++++++++++|+++|+++++|||+|||++||+|+|
T Consensus 633 ilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~r~P 686 (720)
T PF03552_consen 633 ILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKDRIP 686 (720)
T ss_pred HHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccCCcc
Confidence 99999999999998754 36889999999999999999999999999999998
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=2e-72 Score=660.48 Aligned_cols=499 Identities=23% Similarity=0.297 Sum_probs=401.4
Q ss_pred HHHHHHHHHHH-HHHHHHHHhh-ccCCC---hhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCchhhhccCCCCCCC
Q 045732 16 NRVFAAVYTCA-IFGLLYHHVQ-IIHSR---TPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPENLLKVMKPSEFP 90 (697)
Q Consensus 16 ~r~~~~~~~~~-~~~yl~~R~~-~~~~~---~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~~~P 90 (697)
-|++.++..++ .+.|++||++ +++.. ...++++++++|+++.++.++..+..++|.+|++.+. +. .++.+|
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~--~~--~~~~~P 131 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPL--PL--DPEEWP 131 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCC--CC--CcccCC
Confidence 35555555444 5679999999 77654 3357899999999987777776666677777764332 11 245689
Q ss_pred ceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccc
Q 045732 91 ALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETY 170 (697)
Q Consensus 91 ~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~y 170 (697)
+|||+||+ |||+++++++|+.+++++|||+++++|+|+|||++|.|.....++.
T Consensus 132 ~VsViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~----------------------- 185 (713)
T TIGR03030 132 TVDVFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQ----------------------- 185 (713)
T ss_pred eeEEEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhh-----------------------
Confidence 99999999 9999999999999999999999999999999999998742221110
Q ss_pred cccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCC
Q 045732 171 FSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGH 250 (697)
Q Consensus 171 f~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~ 250 (697)
.|.++-+++.+++.++
T Consensus 186 ---------~~~~~~~~~~~~l~~~------------------------------------------------------- 201 (713)
T TIGR03030 186 ---------AEAAQRREELKEFCRK------------------------------------------------------- 201 (713)
T ss_pred ---------hhhhhhHHHHHHHHHH-------------------------------------------------------
Confidence 0000000011111100
Q ss_pred CcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEecCc
Q 045732 251 FLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQFPQ 329 (697)
Q Consensus 251 ~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ~pq 329 (697)
.++.|++|++| +|+||||||+|+++ ++||+|+++|||++++ ||+|++++++|. || ++|+||+||
T Consensus 202 --~~v~yi~r~~n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp----~v~~Vqtp~ 266 (713)
T TIGR03030 202 --LGVNYITRPRN----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDP----KLFLVQTPH 266 (713)
T ss_pred --cCcEEEECCCC----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCC----CEEEEeCCe
Confidence 13789999886 68999999999997 8999999999999995 999999999995 66 699999999
Q ss_pred eeccCCcc-------hHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 045732 330 RFRGLSSN-------DIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQS 402 (697)
Q Consensus 330 ~f~n~~~~-------d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~ 402 (697)
.|+|.+.. +.+.++...||+.++.|.+.++++++||+|+++||++++++
T Consensus 267 ~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~i------------------------ 322 (713)
T TIGR03030 267 FFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEI------------------------ 322 (713)
T ss_pred eccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHc------------------------
Confidence 99986532 23456777899999999999999999999999999999988
Q ss_pred hhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 403 PSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 403 ~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||++++++||++++++++++||+++|++++ .+.|++|+|++++++||.||++|
T Consensus 323 ------------------------GGf~~~~vtED~~l~~rL~~~G~~~~y~~~~--~~~g~~p~sl~~~~~Qr~RWa~G 376 (713)
T TIGR03030 323 ------------------------GGIAGETVTEDAETALKLHRRGWNSAYLDRP--LIAGLAPETLSGHIGQRIRWAQG 376 (713)
T ss_pred ------------------------CCCCCCCcCcHHHHHHHHHHcCCeEEEeccc--cccccCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999974 57899999999999999999999
Q ss_pred cchhhhhccCcccccCCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHHHHHHH
Q 045732 483 GLQMAFARYSPFTVGTKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAYGQD 561 (697)
Q Consensus 483 ~lqi~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~~~~ 561 (697)
++|+++ ..||++. +++++ ||++|+++++|++++++.++|+++|++++++|++++++ +...++.| ++++++.+
T Consensus 377 ~~qi~~-~~~pl~~--~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~-~~~~~~~~---~lp~~~~~ 449 (713)
T TIGR03030 377 MMQIFR-LDNPLLK--RGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVA-SALEILAY---ALPHMLHS 449 (713)
T ss_pred hHHHHh-hhCcccc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeC-CHHHHHHH---HHHHHHHH
Confidence 999998 4589875 78999 99999999999999999999999999999999999985 34334443 35666666
Q ss_pred HHHHHH-hCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccchHH
Q 045732 562 FIEFVL-EGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMFVP 640 (697)
Q Consensus 562 ll~~~~-~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~P 640 (697)
++.+.+ .|.....||++. ..+...++.+..++.+++++++.+|+|||||...+++ . .+++++|
T Consensus 450 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~------~-----~~~~~~p 513 (713)
T TIGR03030 450 LLTNSYLFGRVRWPFWSEV-----YETVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED------Y-----FSPLSRP 513 (713)
T ss_pred HHHHHHHcCCeecchHHHH-----HHHHHHHHHHHHHHHHHhCcCCCCceecCCCcccccc------c-----cchHHHH
Confidence 766443 566667889874 3444555777778888999999999999998754321 1 2478999
Q ss_pred HHHHHHHHHHHHHHhhhhhccCC-ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccCC
Q 045732 641 LAMAAIINLFSFFLGLLKMVGGS-DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDAC 696 (697)
Q Consensus 641 ~~~l~~l~l~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~~ 696 (697)
+++++++|++|+++|++++..++ ....+++|++|++||++++...+....+|+.++
T Consensus 514 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR 570 (713)
T TIGR03030 514 YLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRR 570 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 99999999999999999987554 345678999999999999999999999887653
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-72 Score=655.40 Aligned_cols=480 Identities=22% Similarity=0.288 Sum_probs=386.7
Q ss_pred HHHHH-HHHHHHHHHHHHHHhh-ccCCC---hhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCchhhhccCCCCCCC
Q 045732 16 NRVFA-AVYTCAIFGLLYHHVQ-IIHSR---TPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPENLLKVMKPSEFP 90 (697)
Q Consensus 16 ~r~~~-~~~~~~~~~yl~~R~~-~~~~~---~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~~~P 90 (697)
.|++. ++.+++.+.|++||++ +++.. ..+++++++++|+++.+..++..+....|..|++.+ ++. ..+.+|
T Consensus 185 ~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~--~~~~~P 260 (852)
T PRK11498 185 SALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPK--DMSLWP 260 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCc--ccCCCC
Confidence 44443 4445556789999999 77643 344578999999998777776666666677775432 332 235689
Q ss_pred ceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccc
Q 045732 91 ALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETY 170 (697)
Q Consensus 91 ~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~y 170 (697)
+|||+||| |||+.+++++|+.+++++|||+++++|||+|||++|.|
T Consensus 261 ~VsViIPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t------------------------------- 306 (852)
T PRK11498 261 TVDIFVPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF------------------------------- 306 (852)
T ss_pred cEEEEEec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-------------------------------
Confidence 99999999 99999999999999999999999999999999999854
Q ss_pred cccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCC
Q 045732 171 FSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGH 250 (697)
Q Consensus 171 f~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~ 250 (697)
+++ .++
T Consensus 307 ------------~~l---a~~----------------------------------------------------------- 312 (852)
T PRK11498 307 ------------RQF---AQE----------------------------------------------------------- 312 (852)
T ss_pred ------------HHH---HHH-----------------------------------------------------------
Confidence 111 110
Q ss_pred CcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh-cCCCCCCcEEEEecCc
Q 045732 251 FLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV-SNPVTRSNLSFVQFPQ 329 (697)
Q Consensus 251 ~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~dp~~~~~v~~VQ~pq 329 (697)
..+.|++|++| .|+||||+|+|+++ ++||||+++|||+++. ||+|++++++| .|| ++|+||+||
T Consensus 313 --~~v~yI~R~~n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP----~VglVQtp~ 377 (852)
T PRK11498 313 --VGVKYIARPTH----EHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDK----KLAMMQTPH 377 (852)
T ss_pred --CCcEEEEeCCC----CcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCC----CeEEEEcce
Confidence 02678888875 68999999999998 8999999999999995 99999999876 576 699999999
Q ss_pred eeccCCcch-------HHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 045732 330 RFRGLSSND-------IYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQS 402 (697)
Q Consensus 330 ~f~n~~~~d-------~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~ 402 (697)
.|+|.+... ...++...||+.++.|.+.++++++||+++++||++++++
T Consensus 378 ~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeV------------------------ 433 (852)
T PRK11498 378 HFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEI------------------------ 433 (852)
T ss_pred eccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHHh------------------------
Confidence 999865421 1234667899999999999999999999999999999988
Q ss_pred hhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 403 PSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 403 ~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||++++++||++++++++++||+++|+++ +.+.|++|+|++++++||.||++|
T Consensus 434 ------------------------GGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWarG 487 (852)
T PRK11498 434 ------------------------GGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWARG 487 (852)
T ss_pred ------------------------cCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987 457899999999999999999999
Q ss_pred cchhhhhccCcccccCCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHHHHHHH
Q 045732 483 GLQMAFARYSPFTVGTKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLGAYGQD 561 (697)
Q Consensus 483 ~lqi~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~~~~~~ 561 (697)
++|+++ ++||+.. +++++ ||++|++++++++.+++.++|+++|++|+++|+.++.+ +...++.|+ +|+++..
T Consensus 488 ~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a-~~~~i~~y~---lP~~~~~ 560 (852)
T PRK11498 488 MVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYA-PALMIALFV---LPHMIHA 560 (852)
T ss_pred HHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeC-ChHHHHHHH---HHHHHHH
Confidence 999997 6799874 79999 99999999999999999999999999999999998863 333333333 4544443
Q ss_pred HHHH-HHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccccchHH
Q 045732 562 FIEF-VLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPSPMFVP 640 (697)
Q Consensus 562 ll~~-~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~P 640 (697)
.+.. ..+|.....||++.. .+..+.+.....+..++++++.+|+|||||+..++ +.++|+ +..|
T Consensus 561 ~l~~~~~~g~~r~~~wseiy-----e~v~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~~~P 625 (852)
T PRK11498 561 SLTNSRIQGKYRHSFWSEIY-----ETVLAWYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV----ISRP 625 (852)
T ss_pred HHHHHHhcCcchHhHHHHHH-----HHHHHHHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH----HHHH
Confidence 3333 335666667887642 23333333355666789999999999999875432 446554 5678
Q ss_pred HHHHHHHHHHHHHHhhhhhccCC--ChhHHHHHHHHHHHHHHHHHHHHHHhHhccc
Q 045732 641 LAMAAIINLFSFFLGLLKMVGGS--DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSD 694 (697)
Q Consensus 641 ~~~l~~l~l~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~ 694 (697)
+++++++|++|+++|++++..+. ....+.+|++|++||++++...+...++++.
T Consensus 626 ~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~ 681 (852)
T PRK11498 626 YIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQ 681 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999987654 3356789999999999999999999988865
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=4.2e-38 Score=365.40 Aligned_cols=345 Identities=17% Similarity=0.173 Sum_probs=236.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh-ccCCChhH---HH-----HHHHHHHHHHHHHHHHHHHhhhccccCCCCchhhhc--c
Q 045732 15 LNRVFAAVYTCAIFGLLYHHVQ-IIHSRTPL---AS-----LSLLLSDTVLAFMWATMQVFRMRPIRRKEFPENLLK--V 83 (697)
Q Consensus 15 ~~r~~~~~~~~~~~~yl~~R~~-~~~~~~~~---w~-----~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~--~ 83 (697)
+.|++.+...++.+.|..|+.. +++..... +. .+++..+.+.+..-++..+...+ .|.+....-+. .
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 5677777777788889999999 55432211 11 22223333322222233222211 11111100000 0
Q ss_pred CCCCCCCceeEEeccCCCCCCchHHH----HHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccc
Q 045732 84 MKPSEFPALDVFVCTADPYKEPPINV----VNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRK 159 (697)
Q Consensus 84 ~~~~~~P~VdV~V~t~~p~nE~~~~v----~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k 159 (697)
......|+|+|+||+ |||+++.+ +.|++|+.++|||. +++++|+|||++|.|..
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~------------------ 175 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAA------------------ 175 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHH------------------
Confidence 012458999999999 99998754 55566677799984 69999999999986510
Q ss_pred cCcccCCcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEee
Q 045732 160 NNVLETNPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLI 239 (697)
Q Consensus 160 ~~v~~~~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~ 239 (697)
.| ++.+++++++..
T Consensus 176 --------------------~e----~~~~~~L~~~~~------------------------------------------ 189 (691)
T PRK05454 176 --------------------AE----EAAWLELRAELG------------------------------------------ 189 (691)
T ss_pred --------------------HH----HHHHHHHHHhcC------------------------------------------
Confidence 01 112333332210
Q ss_pred cCCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCC
Q 045732 240 DNGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVT 318 (697)
Q Consensus 240 ~~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~ 318 (697)
..+++.|.+|++| .+.||||+|++++..+ .++|||+++|||++++ +|+|++++++|. ||
T Consensus 190 -----------~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP-- 249 (691)
T PRK05454 190 -----------GEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANP-- 249 (691)
T ss_pred -----------CCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCc--
Confidence 1135889888886 6889999999999865 6789999999999996 999999999986 77
Q ss_pred CCcEEEEecCceeccCCc-chHHHHHH-HHHHHHHHHHHhhcCC--eeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCC
Q 045732 319 RSNLSFVQFPQRFRGLSS-NDIYAAEF-RRLFFVNLLGFDGLKG--ATYVGTGTFFCRRALFGSPSNLISPEIPELHPNY 394 (697)
Q Consensus 319 ~~~v~~VQ~pq~f~n~~~-~d~~~~~~-~~f~~~~~~g~~~~~~--~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~ 394 (697)
++|+||+++.+.|.+. ..+..+.. .++......|.+.|++ ..|+|+|+++||+++.+++. ++.+.
T Consensus 250 --~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~g------lp~L~--- 318 (691)
T PRK05454 250 --RAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCG------LPPLP--- 318 (691)
T ss_pred --CEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcC------Ccccc---
Confidence 6999999999888652 12222222 2233345678777663 56899999999999976510 11110
Q ss_pred CCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHH
Q 045732 395 AVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFIN 474 (697)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~ 474 (697)
| .|||.+++++||++++.+++++|||++|+++. +.+++++|+|+.++++
T Consensus 319 -----------------------------g-~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~-~~~~ee~P~tl~~~~~ 367 (691)
T PRK05454 319 -----------------------------G-RGPFGGHILSHDFVEAALMRRAGWGVWLAPDL-PGSYEELPPNLLDELK 367 (691)
T ss_pred -----------------------------c-cCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc-ccccccCCCCHHHHHH
Confidence 1 17898899999999999999999999999973 3578999999999999
Q ss_pred HHHHHccCcchhhhhccCcccccCCCchH-HHHHHHHHHHHHhh
Q 045732 475 QYKRWAIGGLQMAFARYSPFTVGTKTIGL-MGLAYGHYAIWPIW 517 (697)
Q Consensus 475 Qr~RWa~G~lqi~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~~l~ 517 (697)
||.||++|++|++.. +. .+++++ +|+.|+...+.++.
T Consensus 368 qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~ 405 (691)
T PRK05454 368 RDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLS 405 (691)
T ss_pred HHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999752 22 267888 99988765554443
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=4.3e-37 Score=320.10 Aligned_cols=244 Identities=18% Similarity=0.268 Sum_probs=187.3
Q ss_pred eeEEeccCCCCCCchHHHHHHHHHHHc----CCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCc
Q 045732 92 LDVFVCTADPYKEPPINVVNTALSVMA----FDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNP 167 (697)
Q Consensus 92 VdV~V~t~~p~nE~~~~v~~Tv~s~l~----~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p 167 (697)
|+|+||+ |||++.++.+|+.+.+. +||++ +++|+|+|||+++... +
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--~------------------------ 50 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--L------------------------ 50 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH--H------------------------
Confidence 6899999 99999989999999875 56633 4999999999987320 0
Q ss_pred ccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCC
Q 045732 168 ETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDT 247 (697)
Q Consensus 168 ~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~ 247 (697)
.|. +++++++++. +
T Consensus 51 ------------~~~----~~~~~l~~~~---------~----------------------------------------- 64 (254)
T cd04191 51 ------------AEE----AAWLDLCEEL---------G----------------------------------------- 64 (254)
T ss_pred ------------HHH----HHHHHHHHHh---------C-----------------------------------------
Confidence 011 1122222110 0
Q ss_pred CCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEe
Q 045732 248 TGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQ 326 (697)
Q Consensus 248 ~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ 326 (697)
..++++|++|+++ .|.||||||+++...+ +++|+|+++|||+.+. ||+|.+++.+|. || ++|+||
T Consensus 65 ---~~~~v~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~----~vg~vq 130 (254)
T cd04191 65 ---AQGRIYYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANP----RAGIIQ 130 (254)
T ss_pred ---CCCcEEEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCC----CEEEEe
Confidence 1346999999986 6889999999998633 6789999999999995 999999999996 77 699999
Q ss_pred cCceeccCCcc-hHHH-HHHHHHHHHHHHHHhhcCC--eeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 045732 327 FPQRFRGLSSN-DIYA-AEFRRLFFVNLLGFDGLKG--ATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQS 402 (697)
Q Consensus 327 ~pq~f~n~~~~-d~~~-~~~~~f~~~~~~g~~~~~~--~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~ 402 (697)
+|+.+.|.+.. ..+. .+...|...++.|++.|++ .+|+|+++++||++|.++..
T Consensus 131 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~---------------------- 188 (254)
T cd04191 131 TAPKLIGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCA---------------------- 188 (254)
T ss_pred CCceeECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcC----------------------
Confidence 99999986531 1221 1234455667788877654 57899999999999976410
Q ss_pred hhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 403 PSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 403 ~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
.+ ..|..|||.+++++||+++|++++.+|||++|.++. ..+++++|+|++++++||.||++|
T Consensus 189 --------------~~---~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~~qr~RW~~G 250 (254)
T cd04191 189 --------------LP---VLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFLKRDRRWCQG 250 (254)
T ss_pred --------------Cc---cccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHHHHHHHHHhh
Confidence 00 012227888899999999999999999999999974 235799999999999999999999
Q ss_pred cch
Q 045732 483 GLQ 485 (697)
Q Consensus 483 ~lq 485 (697)
++|
T Consensus 251 ~~q 253 (254)
T cd04191 251 NLQ 253 (254)
T ss_pred cCc
Confidence 998
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=7.2e-35 Score=326.39 Aligned_cols=231 Identities=21% Similarity=0.193 Sum_probs=186.2
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
+..|+|+|+||+ |||+. .+.+|+.|+++++||+ ++|+|+|||++|.|.+.+.+.
T Consensus 72 ~~~p~vsViIP~---yNE~~-~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~-------------------- 125 (444)
T PRK14583 72 KGHPLVSILVPC---FNEGL-NARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDAL-------------------- 125 (444)
T ss_pred CCCCcEEEEEEe---CCCHH-HHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHH--------------------
Confidence 357999999999 99996 5689999999999995 899999999999773222221
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
. +
T Consensus 126 -------------------~---~-------------------------------------------------------- 127 (444)
T PRK14583 126 -------------------L---A-------------------------------------------------------- 127 (444)
T ss_pred -------------------H---H--------------------------------------------------------
Confidence 0 0
Q ss_pred CCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEE
Q 045732 247 TTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFV 325 (697)
Q Consensus 247 ~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~V 325 (697)
+.|++.++.+++ +++||+|+|.|++. +++|+++++|||+++ +||++++++..|. || +++.|
T Consensus 128 ----~~~~v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~~~----~~g~v 189 (444)
T PRK14583 128 ----EDPRLRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIANP----RTGAV 189 (444)
T ss_pred ----hCCCEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHhCC----CeEEE
Confidence 012355555554 36799999999997 799999999999999 5999999998775 44 69999
Q ss_pred ecCceeccCCcc-hH-HHHHHHHHHHHHHHHHhhcCCee-eeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 045732 326 QFPQRFRGLSSN-DI-YAAEFRRLFFVNLLGFDGLKGAT-YVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQS 402 (697)
Q Consensus 326 Q~pq~f~n~~~~-d~-~~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~ 402 (697)
|+.....|.+.. .. ...+...+++.+.++.+..+..+ .+|+++++||+++.++
T Consensus 190 ~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~v------------------------ 245 (444)
T PRK14583 190 TGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADV------------------------ 245 (444)
T ss_pred EccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHHc------------------------
Confidence 998776654311 11 11234445566667777666655 4699999999999987
Q ss_pred hhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 403 PSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 403 ~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||+.+.++||++++++++.+||++.|+++ +.+++++|+|++++++||.||++|
T Consensus 246 ------------------------Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~RW~~G 299 (444)
T PRK14583 246 ------------------------GYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRLRWAQG 299 (444)
T ss_pred ------------------------CCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHHHHhCc
Confidence 999999999999999999999999999997 568999999999999999999999
Q ss_pred cchhhhh
Q 045732 483 GLQMAFA 489 (697)
Q Consensus 483 ~lqi~~~ 489 (697)
.+|++++
T Consensus 300 ~~~~~~~ 306 (444)
T PRK14583 300 GAEVFLK 306 (444)
T ss_pred HHHHHHH
Confidence 9999974
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.7e-35 Score=328.20 Aligned_cols=233 Identities=28% Similarity=0.374 Sum_probs=183.5
Q ss_pred CCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcc
Q 045732 89 FPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPE 168 (697)
Q Consensus 89 ~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~ 168 (697)
+|+|||+||+ |||+++++++|+.+++++|||. ++|+|+|||++|.|.+.+.|..
T Consensus 53 ~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~~~--------------------- 106 (439)
T COG1215 53 LPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEELG--------------------- 106 (439)
T ss_pred CCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHHHH---------------------
Confidence 5999999999 9999999999999999999998 8899999999997643332210
Q ss_pred cccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCC
Q 045732 169 TYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTT 248 (697)
Q Consensus 169 ~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~ 248 (697)
++ .+
T Consensus 107 ---------------------~~-------------~~------------------------------------------ 110 (439)
T COG1215 107 ---------------------AE-------------YG------------------------------------------ 110 (439)
T ss_pred ---------------------hh-------------cC------------------------------------------
Confidence 00 00
Q ss_pred CCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecC
Q 045732 249 GHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFP 328 (697)
Q Consensus 249 ~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~p 328 (697)
|.++.+..++ ++++|++|+|.+++. +++|+|+++|||+++. ||+|++++..|.|+. ..+.+|.|
T Consensus 111 ----~~~~~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~---~~~v~~~~ 174 (439)
T COG1215 111 ----PNFRVIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPP---VGAVVGTP 174 (439)
T ss_pred ----cceEEEeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCC---eeEEeCCc
Confidence 0111111112 369999999999997 7899999999999995 999999999999874 34789999
Q ss_pred ceeccCCcchHHHHHHHH-----HHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 045732 329 QRFRGLSSNDIYAAEFRR-----LFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSP 403 (697)
Q Consensus 329 q~f~n~~~~d~~~~~~~~-----f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (697)
+.+.+.+....++..... ++...+.+.+.....+++|+++++||++|.++
T Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~------------------------- 229 (439)
T COG1215 175 RIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEV------------------------- 229 (439)
T ss_pred eeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHh-------------------------
Confidence 887765321122222111 22222223333345778999999999999987
Q ss_pred hHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCc
Q 045732 404 SILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGG 483 (697)
Q Consensus 404 ~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~ 483 (697)
|||..+++|||.+++++++.+|||+.|+++ +.+++++|+|+.++++||.||++|+
T Consensus 230 -----------------------g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 284 (439)
T COG1215 230 -----------------------GGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQRLRWARGG 284 (439)
T ss_pred -----------------------CCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHHHHHHccc
Confidence 899999999999999999999999999998 5689999999999999999999999
Q ss_pred chhhhh
Q 045732 484 LQMAFA 489 (697)
Q Consensus 484 lqi~~~ 489 (697)
+|++..
T Consensus 285 ~~~~~~ 290 (439)
T COG1215 285 LQVLLL 290 (439)
T ss_pred ceeeeh
Confidence 999973
No 17
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=6.6e-34 Score=318.17 Aligned_cols=280 Identities=15% Similarity=0.219 Sum_probs=202.1
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
+..|+|+|+||+ |||+ +.+.+||.|+++++||+++++|+|+|||++|.|.+.+.++.
T Consensus 46 ~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~------------------- 102 (439)
T TIGR03111 46 GKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQ------------------- 102 (439)
T ss_pred CCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHH-------------------
Confidence 568999999999 9999 68899999999999999999999999999998743333310
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
+
T Consensus 103 ---------------------------~---------------------------------------------------- 103 (439)
T TIGR03111 103 ---------------------------N---------------------------------------------------- 103 (439)
T ss_pred ---------------------------H----------------------------------------------------
Confidence 0
Q ss_pred CCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEE
Q 045732 247 TTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFV 325 (697)
Q Consensus 247 ~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~V 325 (697)
..|++..+.-++ ++|||+|+|.|++. +++|+|+++|||+++ +||+|++++..|. || +++.|
T Consensus 104 ----~~~~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~~~----~v~~v 165 (439)
T TIGR03111 104 ----EFPGLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFENNP----DIHAM 165 (439)
T ss_pred ----hCCCeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHhCC----CeEEE
Confidence 001122222222 47899999999997 889999999999999 5999999999986 55 57777
Q ss_pred ecCceeccCC--cc----hHHHHHHHHHHHHH---H--HHHhh-cCCee-eeeeeEeeehhhhcCCCCCCCCCCCCCCCC
Q 045732 326 QFPQRFRGLS--SN----DIYAAEFRRLFFVN---L--LGFDG-LKGAT-YVGTGTFFCRRALFGSPSNLISPEIPELHP 392 (697)
Q Consensus 326 Q~pq~f~n~~--~~----d~~~~~~~~f~~~~---~--~g~~~-~~~~~-~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~ 392 (697)
++.+.-.... .. ..+..+. .+++.. . +...+ .+..+ ++|+++++||+++.++
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~v-------------- 230 (439)
T TIGR03111 166 TGVILTDKELIEKTKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKT-------------- 230 (439)
T ss_pred EeEEecCchhhhhhcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHh--------------
Confidence 6544221100 00 0111111 112211 1 12222 22333 4678888999999887
Q ss_pred CCCCCCCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHh-CCcEEEEeCCCCCceeeecCCCHHH
Q 045732 393 NYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHC-EGWRSIYCTPDRPAFYGDAPITLFD 471 (697)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~-~Gwrsvy~~~~~~~~~g~aP~tl~~ 471 (697)
|||+.++++||++++++++. .|+|+.|+++ +.++.++|+|+++
T Consensus 231 ----------------------------------ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~ 274 (439)
T TIGR03111 231 ----------------------------------QLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNK 274 (439)
T ss_pred ----------------------------------CCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHH
Confidence 99999999999999999975 6999999987 5689999999999
Q ss_pred HHHHHHHHccCcchhhhhccCcccccCCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccc
Q 045732 472 FINQYKRWAIGGLQMAFARYSPFTVGTKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIF 539 (697)
Q Consensus 472 ~l~Qr~RWa~G~lqi~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~ 539 (697)
+++||.||++|.+|++....++... ++.++ +++.+..........+|.+++.++++++.++|.++.
T Consensus 275 ~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 275 LYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999999742233321 34555 665554444444557788888888888888876544
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=4.2e-33 Score=309.25 Aligned_cols=229 Identities=24% Similarity=0.290 Sum_probs=183.4
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
...|+|+|+||+ |||+ +.+.+|+.|+++++||+ ++|+|+|||++|.|.+.+.+.
T Consensus 51 ~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~-------------------- 104 (420)
T PRK11204 51 KEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRL-------------------- 104 (420)
T ss_pred CCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHH--------------------
Confidence 458999999999 9998 57789999999999994 889999999999763222210
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
.
T Consensus 105 -----------------------~-------------------------------------------------------- 105 (420)
T PRK11204 105 -----------------------A-------------------------------------------------------- 105 (420)
T ss_pred -----------------------H--------------------------------------------------------
Confidence 0
Q ss_pred CCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEE
Q 045732 247 TTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFV 325 (697)
Q Consensus 247 ~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~V 325 (697)
...|++.++.+++| +||++|+|.|++. +++|+++++|||+++. ||+|.+++..|. || ++++|
T Consensus 106 ---~~~~~v~~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~----~v~~v 168 (420)
T PRK11204 106 ---AQIPRLRVIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNP----RVGAV 168 (420)
T ss_pred ---HhCCcEEEEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CeEEE
Confidence 01234677776653 6799999999997 8999999999999995 999999999994 65 69999
Q ss_pred ecCceeccCCcchHHHH----HHHHHHHHHHHHHhhcCCee-eeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q 045732 326 QFPQRFRGLSSNDIYAA----EFRRLFFVNLLGFDGLKGAT-YVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPI 400 (697)
Q Consensus 326 Q~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~ 400 (697)
|+.....|... ..+. +....++....+....+... .+|+++++||+++.++
T Consensus 169 ~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~v---------------------- 224 (420)
T PRK11204 169 TGNPRIRNRST--LLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEV---------------------- 224 (420)
T ss_pred ECCceeccchh--HHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHh----------------------
Confidence 99877766421 1211 22223333444444444443 4688899999999887
Q ss_pred CchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHc
Q 045732 401 QSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWA 480 (697)
Q Consensus 401 ~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa 480 (697)
|||+++.++||++++++++.+||++.|+++ +.++++.|+|++++++||.||+
T Consensus 225 --------------------------gg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr~RW~ 276 (420)
T PRK11204 225 --------------------------GYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGLWKQRLRWA 276 (420)
T ss_pred --------------------------CCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHHHHHHHHHh
Confidence 999999999999999999999999999998 5599999999999999999999
Q ss_pred cCcchhhhh
Q 045732 481 IGGLQMAFA 489 (697)
Q Consensus 481 ~G~lqi~~~ 489 (697)
+|++|+++.
T Consensus 277 ~G~~~~l~~ 285 (420)
T PRK11204 277 QGGAEVLLK 285 (420)
T ss_pred cCHHHHHHH
Confidence 999999983
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=6.6e-30 Score=287.98 Aligned_cols=262 Identities=23% Similarity=0.206 Sum_probs=181.7
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVM-AFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l-~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
.+.|+|+|+||+ |||+ .++.+||.+++ ++||| +++|+|+||+++|.|.+.+.+
T Consensus 63 ~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~-------------------- 116 (504)
T PRK14716 63 VPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDR-------------------- 116 (504)
T ss_pred CCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHH--------------------
Confidence 458999999999 9999 58899999964 79997 489999999999987433332
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
+++ +|
T Consensus 117 -------------------l~~------------------------------------------~~-------------- 121 (504)
T PRK14716 117 -------------------LAA------------------------------------------RY-------------- 121 (504)
T ss_pred -------------------HHH------------------------------------------HC--------------
Confidence 110 11
Q ss_pred CCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcc--cCCCC---CEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCC
Q 045732 246 DTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSA--TMTNA---PIILTLDCDTSSNDPQTPLRVLCYVSNPVTRS 320 (697)
Q Consensus 246 ~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~--~~s~g---e~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~ 320 (697)
|+++.+. .+++| .++|++|||.+++..- ....| |+|+++|||.++ +|++|+.....+.|
T Consensus 122 -------p~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~~----- 185 (504)
T PRK14716 122 -------PRVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLPR----- 185 (504)
T ss_pred -------CCeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcCC-----
Confidence 2222222 11111 4689999999997531 11234 999999999999 59999877665543
Q ss_pred cEEEEecCceeccCCcchH----HHHHHHHHHHHHHHHHhhcCCee-eeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCC
Q 045732 321 NLSFVQFPQRFRGLSSNDI----YAAEFRRLFFVNLLGFDGLKGAT-YVGTGTFFCRRALFGSPSNLISPEIPELHPNYA 395 (697)
Q Consensus 321 ~v~~VQ~pq~f~n~~~~d~----~~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~ 395 (697)
.++||.|....+...... +..+....+...+..++.+++++ ++|+|+++||++|+++.
T Consensus 186 -~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~---------------- 248 (504)
T PRK14716 186 -HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLA---------------- 248 (504)
T ss_pred -CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHH----------------
Confidence 468999986655432222 12222222333455678888775 68999999999998640
Q ss_pred CCCCCCchhHHhhhcccccccccccccccccc-CccCCCccchHHHHHHHHhCCcEEEEeCCCC-------------Cce
Q 045732 396 VDEPIQSPSILSLAHHVASCNYENRTNWGSKM-GFRYGSLTEDYYTGYRLHCEGWRSIYCTPDR-------------PAF 461 (697)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g-G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~-------------~~~ 461 (697)
++ ..| +|+++++|||+++|++++.+|||++|++.+. .+.
T Consensus 249 -----------~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t 301 (504)
T PRK14716 249 -----------AE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIAT 301 (504)
T ss_pred -----------hh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccc
Confidence 00 003 3999999999999999999999999998741 124
Q ss_pred eeecCCCHHHHHHHHHHHccCc-chhhhhcc--CcccccCCCchH-HHHHHHHH
Q 045732 462 YGDAPITLFDFINQYKRWAIGG-LQMAFARY--SPFTVGTKTIGL-MGLAYGHY 511 (697)
Q Consensus 462 ~g~aP~tl~~~l~Qr~RWa~G~-lqi~~~~~--~Pl~~~~~~l~~-qrl~y~~~ 511 (697)
.+++|+|++++++||.||+.|. +|...... .++. .+.+.+ +|..-+..
T Consensus 302 ~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 302 REFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTN 353 (504)
T ss_pred cccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHH
Confidence 5889999999999999999995 78764211 1111 244555 77665543
No 20
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.98 E-value=1e-30 Score=264.31 Aligned_cols=229 Identities=38% Similarity=0.492 Sum_probs=187.9
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|+|+|+||+ |||+++.+++|+.|+++++||.++++|+|+|||++|.|.+.+.+
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------------ 53 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE------------------------ 53 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH------------------------
Confidence 789999999 99988889999999999999998899999999999866211111
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
+.. .
T Consensus 54 ----------------------~~~----------------------------------~-------------------- 57 (234)
T cd06421 54 ----------------------LGV----------------------------------E-------------------- 57 (234)
T ss_pred ----------------------hhc----------------------------------c--------------------
Confidence 000 0
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC-CCCCCcEEEEecC
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN-PVTRSNLSFVQFP 328 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d-p~~~~~v~~VQ~p 328 (697)
.++.++.++++ .++|++|+|.|++. +++|||+++|+|.+++ |++|.+++..|.+ + ++++|+++
T Consensus 58 ---~~~~~~~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~~v~~~ 121 (234)
T cd06421 58 ---YGYRYLTRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDDP----KVALVQTP 121 (234)
T ss_pred ---cCceEEEeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcCC----CeEEEecc
Confidence 01445555553 58899999999997 7999999999999995 9999999999976 4 68999999
Q ss_pred ceeccCCcc----hHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 045732 329 QRFRGLSSN----DIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPS 404 (697)
Q Consensus 329 q~f~n~~~~----d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (697)
+.+.+.+.. ..+......++..+..+...++...++|++.++||+++.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~i-------------------------- 175 (234)
T cd06421 122 QFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDEI-------------------------- 175 (234)
T ss_pred eEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHHh--------------------------
Confidence 888775542 12233344455556666666677888999999999999887
Q ss_pred HHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcc
Q 045732 405 ILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGL 484 (697)
Q Consensus 405 ~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~l 484 (697)
|||+...+.||++++.+++.+||+++|.+++ .+++..|++++++++||.||.+|++
T Consensus 176 ----------------------g~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~--~~~~~~~~~~~~~~~q~~rw~~~~~ 231 (234)
T cd06421 176 ----------------------GGFPTDSVTEDLATSLRLHAKGWRSVYVPEP--LAAGLAPETLAAYIKQRLRWARGML 231 (234)
T ss_pred ----------------------CCCCccceeccHHHHHHHHHcCceEEEecCc--cccccCCccHHHHHHHHHHHhcCCe
Confidence 8999888999999999999999999999984 4889999999999999999999999
Q ss_pred hhh
Q 045732 485 QMA 487 (697)
Q Consensus 485 qi~ 487 (697)
|++
T Consensus 232 ~~~ 234 (234)
T cd06421 232 QIL 234 (234)
T ss_pred eeC
Confidence 864
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=9.2e-31 Score=266.47 Aligned_cols=228 Identities=23% Similarity=0.327 Sum_probs=176.7
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|++.+.+..
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~---------------------- 53 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIV---------------------- 53 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHH----------------------
Confidence 689999999 9998 578899999999999998999999998 8887754444421
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
+++.+
T Consensus 54 -----------------~~~~~---------------------------------------------------------- 58 (232)
T cd06437 54 -----------------EEYAA---------------------------------------------------------- 58 (232)
T ss_pred -----------------HHHhh----------------------------------------------------------
Confidence 00100
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCc
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQ 329 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq 329 (697)
..+++.++.+.++ .++|++|+|.|++. ++||+|+++|||+++. |++|+++..++.|+ ++++||++.
T Consensus 59 -~~~~i~~~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~ 124 (232)
T cd06437 59 -QGVNIKHVRRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADP----KLGFVQTRW 124 (232)
T ss_pred -cCCceEEEECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCC----CeEEEecce
Confidence 0123566666654 46799999999997 7999999999999995 99999988888776 699999877
Q ss_pred eeccCCcch--HHH-HHHHHHHHHHHHHHhhcCCe-eeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 045732 330 RFRGLSSND--IYA-AEFRRLFFVNLLGFDGLKGA-TYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSI 405 (697)
Q Consensus 330 ~f~n~~~~d--~~~-~~~~~f~~~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (697)
.+.|.+.+- ... .....++...+.+....+.. .++|+++++||+++.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v--------------------------- 177 (232)
T cd06437 125 GHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIEDA--------------------------- 177 (232)
T ss_pred eeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHHh---------------------------
Confidence 666543221 111 11111233333444434443 35799999999999887
Q ss_pred HhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCc
Q 045732 406 LSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGG 483 (697)
Q Consensus 406 ~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~ 483 (697)
|||+..+..||+++++|++.+||+++|+++ +.+++..|+|++++++||+||++|.
T Consensus 178 ---------------------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 178 ---------------------GGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred ---------------------CCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhccCC
Confidence 999988899999999999999999999997 5589999999999999999999994
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=1.9e-28 Score=286.33 Aligned_cols=235 Identities=24% Similarity=0.265 Sum_probs=174.3
Q ss_pred CCCCCceeEEeccCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCccc
Q 045732 86 PSEFPALDVFVCTADPYKEPPINVVNTALSVM-AFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLE 164 (697)
Q Consensus 86 ~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l-~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~ 164 (697)
.++.|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|++++|++++.|.+.+.+
T Consensus 59 ~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~------------------- 113 (727)
T PRK11234 59 KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDA------------------- 113 (727)
T ss_pred cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHH-------------------
Confidence 3567999999999 9999 68889999987 799997 89999998888776422222
Q ss_pred CCcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCC
Q 045732 165 TNPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKD 244 (697)
Q Consensus 165 ~~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~ 244 (697)
+.+.
T Consensus 114 --------------------l~~~-------------------------------------------------------- 117 (727)
T PRK11234 114 --------------------VCAR-------------------------------------------------------- 117 (727)
T ss_pred --------------------HHHH--------------------------------------------------------
Confidence 1111
Q ss_pred CCCCCCCcCeEE--EEEccCCCCCCCCChHHHHHHHHHhccc-----CCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCC
Q 045732 245 EDTTGHFLPNLI--YVSREKSKSCPSHFKAGALNAMLRVSAT-----MTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPV 317 (697)
Q Consensus 245 ~~~~~~~~p~l~--yv~R~k~~~~~~~~KAGaLN~al~~~~~-----~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~ 317 (697)
+|+++ .+.|. | .++||+|||+++...-. ....++++++|||.++ +|++|+ .+.++.++
T Consensus 118 -------~p~~~~v~~~~~---g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~- 182 (727)
T PRK11234 118 -------FPNVHKVVCARP---G--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVER- 182 (727)
T ss_pred -------CCCcEEEEeCCC---C--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCC-
Confidence 12222 22332 2 47899999999997411 0245778899999999 599997 67788765
Q ss_pred CCCcEEEEecCceeccCCcchHH----HHHHHHHHHHHHHHHhhcCCee-eeeeeEee-eh--hhhcCCCCCCCCCCCCC
Q 045732 318 TRSNLSFVQFPQRFRGLSSNDIY----AAEFRRLFFVNLLGFDGLKGAT-YVGTGTFF-CR--RALFGSPSNLISPEIPE 389 (697)
Q Consensus 318 ~~~~v~~VQ~pq~f~n~~~~d~~----~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~-RR--~aL~~i~~~~~~~~~~~ 389 (697)
+ ++||.|....+...+... ..+....++..+.+++.+++++ +.|+|++| || ++|.++
T Consensus 183 ---~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~----------- 247 (727)
T PRK11234 183 ---K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLED----------- 247 (727)
T ss_pred ---C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHh-----------
Confidence 3 899999764443222222 2343334556678889997765 67999999 66 456554
Q ss_pred CCCCCCCCCCCCchhHHhhhcccccccccccccccccc---CccCCCccchHHHHHHHHhCCcEEEEeCCCC--------
Q 045732 390 LHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM---GFRYGSLTEDYYTGYRLHCEGWRSIYCTPDR-------- 458 (697)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g---G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~-------- 458 (697)
| ||+.+++|||+++|++|+.+||+++|++...
T Consensus 248 -------------------------------------ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~ 290 (727)
T PRK11234 248 -------------------------------------GDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKERE 290 (727)
T ss_pred -------------------------------------cCCCCcCCCcchHHHHHHHHHHHCCCEEEEccccccccccccc
Confidence 4 5999999999999999999999999998211
Q ss_pred -------------CceeeecCCCHHHHHHHHHHHccC-cchhhh
Q 045732 459 -------------PAFYGDAPITLFDFINQYKRWAIG-GLQMAF 488 (697)
Q Consensus 459 -------------~~~~g~aP~tl~~~l~Qr~RWa~G-~lqi~~ 488 (697)
.++++..|+|+++.++||.||.+| .+|.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 291 QRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred ccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 347888999999999999999999 577764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=1.8e-29 Score=259.15 Aligned_cols=231 Identities=23% Similarity=0.276 Sum_probs=180.5
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|.|+|+||+ |||+ ..+.+||.|+++++||+++++|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~----------------------- 53 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARAL----------------------- 53 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHh-----------------------
Confidence 789999999 9999 6788999999999999888999999999999774322220
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
.. +
T Consensus 54 --------------------~~--------------~------------------------------------------- 56 (241)
T cd06427 54 --------------------RL--------------P------------------------------------------- 56 (241)
T ss_pred --------------------cc--------------C-------------------------------------------
Confidence 00 0
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCc
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQ 329 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq 329 (697)
...+++++...+ ..+|++|+|.|++. ++||+|+++|+|+.+. |++|.+++.+|.+. ++++++||++.
T Consensus 57 -~~~~i~~~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~ 123 (241)
T cd06427 57 -SIFRVVVVPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPL 123 (241)
T ss_pred -CCeeEEEecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCce
Confidence 001133333322 36899999999997 8999999999999995 99999999998732 13799999988
Q ss_pred eeccCCcch---HHHHHHHHHHHHHHHHHhhcCCee-eeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 045732 330 RFRGLSSND---IYAAEFRRLFFVNLLGFDGLKGAT-YVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSI 405 (697)
Q Consensus 330 ~f~n~~~~d---~~~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (697)
.+.|...+- ....+....++....+....+... ++|++.++||+++.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v--------------------------- 176 (241)
T cd06427 124 NYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLREL--------------------------- 176 (241)
T ss_pred EeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHHc---------------------------
Confidence 777643221 111222233455556666666554 4688889999999987
Q ss_pred HhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcch
Q 045732 406 LSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQ 485 (697)
Q Consensus 406 ~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lq 485 (697)
|||+....+||++.+++++.+|||+++++. .+++..|+|++++++||.||++|.+|
T Consensus 177 ---------------------gg~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~Rw~~g~~~ 232 (241)
T cd06427 177 ---------------------GGWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSRWIKGYMQ 232 (241)
T ss_pred ---------------------CCCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHHHhccHHH
Confidence 899887889999999999999999999975 25788999999999999999999999
Q ss_pred hhh
Q 045732 486 MAF 488 (697)
Q Consensus 486 i~~ 488 (697)
++.
T Consensus 233 ~~~ 235 (241)
T cd06427 233 TWL 235 (241)
T ss_pred HHH
Confidence 986
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.97 E-value=7.7e-29 Score=252.19 Aligned_cols=231 Identities=28% Similarity=0.375 Sum_probs=174.3
Q ss_pred eEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccccc
Q 045732 93 DVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFS 172 (697)
Q Consensus 93 dV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~ 172 (697)
+|+||+ |||+++.+.+|+.|+++++||+ .+|+|+|||++|.|..
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~------------------------------- 44 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALW------------------------------- 44 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHH-------------------------------
Confidence 589999 9999889999999999999996 7899999999997631
Q ss_pred cccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCc
Q 045732 173 LNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFL 252 (697)
Q Consensus 173 ~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~ 252 (697)
++++++ .++. -
T Consensus 45 -------~~i~~~---~~~~-----------------------------------------------------------~ 55 (236)
T cd06435 45 -------KPVEAH---CAQL-----------------------------------------------------------G 55 (236)
T ss_pred -------HHHHHH---HHHh-----------------------------------------------------------C
Confidence 011111 0000 0
Q ss_pred CeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceec
Q 045732 253 PNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFR 332 (697)
Q Consensus 253 p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~ 332 (697)
+++.++..+++ .++|++|+|.|++.+. .++|+|+++|+|..++ |++|.+++..|.++ ++++|+++..+.
T Consensus 56 ~~i~~i~~~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~ 124 (236)
T cd06435 56 ERFRFFHVEPL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDP----RVGFVQAPQDYR 124 (236)
T ss_pred CcEEEEEcCCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCC----CeeEEecCcccc
Confidence 12455555543 4679999999999742 3589999999999995 99999999999865 689999887655
Q ss_pred cCCcchHHHHHH----HHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhh
Q 045732 333 GLSSNDIYAAEF----RRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSL 408 (697)
Q Consensus 333 n~~~~d~~~~~~----~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (697)
+... ..+.... ..++..........+..++.|+++++||+++.++
T Consensus 125 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~i------------------------------ 173 (236)
T cd06435 125 DGEE-SLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDV------------------------------ 173 (236)
T ss_pred CCCc-cHHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHHHh------------------------------
Confidence 4322 1221111 1111111112222334556899899999999987
Q ss_pred hccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhhh
Q 045732 409 AHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMAF 488 (697)
Q Consensus 409 ~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~~ 488 (697)
|||+.....||++++++++.+|||+.|+++ +..+...|+|+.++++||.||++|++|++.
T Consensus 174 ------------------Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~ 233 (236)
T cd06435 174 ------------------GGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAYGAVQILK 233 (236)
T ss_pred ------------------CCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhcchhhhhh
Confidence 899988889999999999999999999997 457899999999999999999999999987
Q ss_pred hcc
Q 045732 489 ARY 491 (697)
Q Consensus 489 ~~~ 491 (697)
+|
T Consensus 234 -~~ 235 (236)
T cd06435 234 -KH 235 (236)
T ss_pred -cc
Confidence 44
No 25
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=4e-26 Score=250.33 Aligned_cols=228 Identities=16% Similarity=0.204 Sum_probs=166.6
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
...|+|+|+||+ |||++ .+.+|+.|++++|||+ ++|+|+||+++|.|.+.+.+
T Consensus 38 ~~~p~VSViiP~---~nee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~--------------------- 90 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRR--------------------- 90 (373)
T ss_pred CCCCCeEEEEEC---CCCCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHH---------------------
Confidence 348999999999 99996 5679999999999997 89999999999976322221
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
++++ ||+
T Consensus 91 ------------------~~~~------------------------------------------~p~------------- 97 (373)
T TIGR03472 91 ------------------LRAD------------------------------------------FPD------------- 97 (373)
T ss_pred ------------------HHHh------------------------------------------CCC-------------
Confidence 1000 111
Q ss_pred CCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEe
Q 045732 247 TTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQ 326 (697)
Q Consensus 247 ~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ 326 (697)
.++.++..+++.| .++|++|+|++++. +++|+++++|||.+++ ||+|++++..|.|| ++++|+
T Consensus 98 ------~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~----~v~~V~ 160 (373)
T TIGR03472 98 ------ADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADP----DVGLVT 160 (373)
T ss_pred ------CceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCC----CcceEe
Confidence 1244554444332 46799999999986 8999999999999995 99999999999887 589998
Q ss_pred cCceeccCCcchHHHHHHH-----HHHHHHHHHHhhcCC-eeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q 045732 327 FPQRFRGLSSNDIYAAEFR-----RLFFVNLLGFDGLKG-ATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPI 400 (697)
Q Consensus 327 ~pq~f~n~~~~d~~~~~~~-----~f~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~ 400 (697)
++....+. ......... .++...... ...+. .++.|++.++||++++++
T Consensus 161 ~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~~i---------------------- 215 (373)
T TIGR03472 161 CLYRGRPV--PGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLEAI---------------------- 215 (373)
T ss_pred ccccCCCC--CCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHHHc----------------------
Confidence 86432221 111111111 111111111 12222 346788889999999988
Q ss_pred CchhHHhhhccccccccccccccccccCccC--CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHH
Q 045732 401 QSPSILSLAHHVASCNYENRTNWGSKMGFRY--GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKR 478 (697)
Q Consensus 401 ~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~R 478 (697)
|||+. ++++||++++.++..+||++.|.+. +..+...|+|++++++||.|
T Consensus 216 --------------------------GGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~~~~q~~R 267 (373)
T TIGR03472 216 --------------------------GGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFATLLAHELR 267 (373)
T ss_pred --------------------------CChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHHHHHHHHH
Confidence 99985 5789999999999999999999876 45677788999999999999
Q ss_pred HccCcc
Q 045732 479 WAIGGL 484 (697)
Q Consensus 479 Wa~G~l 484 (697)
|++..-
T Consensus 268 W~r~~~ 273 (373)
T TIGR03472 268 WSRTIR 273 (373)
T ss_pred HHhhhh
Confidence 985544
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=4.2e-29 Score=252.50 Aligned_cols=224 Identities=29% Similarity=0.356 Sum_probs=143.3
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|+|+|+||+ |||+. .+.+||.|+++++||+ ++|+|+||++++.|.+.+.+
T Consensus 1 P~v~Vvip~---~~~~~-~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~------------------------ 50 (228)
T PF13641_consen 1 PRVSVVIPA---YNEDD-VLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRA------------------------ 50 (228)
T ss_dssp --EEEE--B---SS-HH-HHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHH------------------------
T ss_pred CEEEEEEEe---cCCHH-HHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHH------------------------
Confidence 789999999 99995 7789999999999965 99999999999866322221
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
+.+.| + +
T Consensus 51 ---------------~~~~~----------------~--------------------------~---------------- 57 (228)
T PF13641_consen 51 ---------------LAARY----------------P--------------------------R---------------- 57 (228)
T ss_dssp ---------------HHHTT----------------G--------------------------G----------------
T ss_pred ---------------HHHHc----------------C--------------------------C----------------
Confidence 10000 0 0
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCc
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQ 329 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq 329 (697)
-.+.++.+++++| .++|++|+|.+++. .++|+|+++|+|+++ +|++|.+++.+|.+| ++++||++.
T Consensus 58 ---~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~----~~~~v~~~~ 123 (228)
T PF13641_consen 58 ---VRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADP----GVGAVGGPV 123 (228)
T ss_dssp ----GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--EEEEEE
T ss_pred ---CceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhC----CCCeEeeeE
Confidence 0156666665421 24799999999998 789999999999999 599999999999776 699999888
Q ss_pred eeccCCcchHHHHHHHHHH----HHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 045732 330 RFRGLSSNDIYAAEFRRLF----FVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSI 405 (697)
Q Consensus 330 ~f~n~~~~d~~~~~~~~f~----~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (697)
.+.+.... +......++ .....+....+..+++|+++++||+++.++
T Consensus 124 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~~--------------------------- 174 (228)
T PF13641_consen 124 FPDNDRNW--LTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEEV--------------------------- 174 (228)
T ss_dssp EETTCCCE--EEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHHH---------------------------
T ss_pred eecCCCCH--HHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHHh---------------------------
Confidence 66653211 100001111 111223344445667899999999999887
Q ss_pred HhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 406 LSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 406 ~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||+.....||.++++++.++||++.|+++ +.++...|.+++++++||.||++|
T Consensus 175 ---------------------g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 175 ---------------------GGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ----------------------S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred ---------------------CCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 899988889999999999999999999997 558999999999999999999987
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.95 E-value=1.9e-27 Score=245.69 Aligned_cols=172 Identities=16% Similarity=0.073 Sum_probs=114.8
Q ss_pred HHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh-cCCCCCCcEEEEecCceeccCCcchHHHHHHHH-H--HH
Q 045732 274 ALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV-SNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRR-L--FF 349 (697)
Q Consensus 274 aLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~-f--~~ 349 (697)
++|.++.. +++|+|+++|||+++. |++|++++.+| .|| ++|.|++.....|...+ .+...+.. + ..
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~-~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQG-PLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcch-hHHHhHheehhhhh
Confidence 45666654 7999999999999995 99999999998 466 69999998877664322 22111111 1 01
Q ss_pred HH-HHHHhhcCCe-eeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccccccccccc
Q 045732 350 VN-LLGFDGLKGA-TYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM 427 (697)
Q Consensus 350 ~~-~~g~~~~~~~-~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g 427 (697)
.+ ..+....+.. ++.|++++||++++.++... ......+.|.+.+... ..
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~---------------------------~~~~~~~~~~~~~~~~-~~ 185 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGG---------------------------KGPLLDYAYLTNTVDS-LH 185 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccc---------------------------cccchhhccccCcccc-hH
Confidence 11 1233334443 45699999999999875100 0000000010010000 01
Q ss_pred CccCCCccchHHHHHHHHhCCcEEEE--eCCCCCceeeecCCCHHHHHHHHHHHccCcch
Q 045732 428 GFRYGSLTEDYYTGYRLHCEGWRSIY--CTPDRPAFYGDAPITLFDFINQYKRWAIGGLQ 485 (697)
Q Consensus 428 G~~~~svtED~~t~~~l~~~Gwrsvy--~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lq 485 (697)
+....+++||.+++++|..+|||+.| +++ +.+++++|+|++++++||+||++|++.
T Consensus 186 ~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 186 KKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 22335689999999999999999999 876 568999999999999999999999874
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=9.2e-24 Score=244.55 Aligned_cols=236 Identities=22% Similarity=0.270 Sum_probs=170.8
Q ss_pred CCCCCceeEEeccCCCCCCchHHHHHHHHHHH-cCCCCCCceEEEE---ecCCCCchhhHhHHHHHHhhhhccccccccC
Q 045732 86 PSEFPALDVFVCTADPYKEPPINVVNTALSVM-AFDYPTDKLSVYV---SDDGGCAATLFGFVEAAKFARHWLPFCRKNN 161 (697)
Q Consensus 86 ~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l-~~dYP~~kl~v~v---~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~ 161 (697)
..+.|.|+|+||+ |||+ +++.+||.+++ ++|||+ ++|+| .|||.+..
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~~----------------------- 117 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETIT----------------------- 117 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHHH-----------------------
Confidence 3567999999999 9999 78999999986 899995 78998 57774431
Q ss_pred cccCCcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecC
Q 045732 162 VLETNPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDN 241 (697)
Q Consensus 162 v~~~~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~ 241 (697)
+++++++
T Consensus 118 -------------------~~~~~~~------------------------------------------------------ 124 (703)
T PRK15489 118 -------------------EVERMRR------------------------------------------------------ 124 (703)
T ss_pred -------------------HHHHHhc------------------------------------------------------
Confidence 2222100
Q ss_pred CCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhc--cc-CCCCC--EEEEeCCCCCCCCCcHHHHHHHHhcCC
Q 045732 242 GKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVS--AT-MTNAP--IILTLDCDTSSNDPQTPLRVLCYVSNP 316 (697)
Q Consensus 242 ~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~--~~-~s~ge--~Il~lDAD~~~~~p~~L~~~v~~f~dp 316 (697)
++|+++.|..+.+ ...+||.|||.++... .. ...++ .|+++|||.++ ||++|+.+ .++.+.
T Consensus 125 ---------~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~-~P~~L~~~-~~~~~~ 190 (703)
T PRK15489 125 ---------RYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVL-HPLELKYF-NYLLPR 190 (703)
T ss_pred ---------cCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCC-ChhHHHHH-HhhcCC
Confidence 1233444444332 2588999999999863 00 11334 49999999999 69999765 566543
Q ss_pred CCCCcEEEEecCce-eccCCcc---hHHHHHHHHHHHHHHHHHhhcCCee-eeeeeEeeehhhhcCCCCCCCCCCCCCCC
Q 045732 317 VTRSNLSFVQFPQR-FRGLSSN---DIYAAEFRRLFFVNLLGFDGLKGAT-YVGTGTFFCRRALFGSPSNLISPEIPELH 391 (697)
Q Consensus 317 ~~~~~v~~VQ~pq~-f~n~~~~---d~~~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~ 391 (697)
-.+||.|-. ..|...+ ..+..|....++..+.+++..++++ .+|+|++|||++|..+
T Consensus 191 -----~~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l------------- 252 (703)
T PRK15489 191 -----KDLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLAL------------- 252 (703)
T ss_pred -----cceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHH-------------
Confidence 146898742 2222111 2355667777888889999999887 4799999999998653
Q ss_pred CCCCCCCCCCchhHHhhhcccccccccccccccccc---CccCCCccchHHHHHHHHhCCcEEEEeCC------------
Q 045732 392 PNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM---GFRYGSLTEDYYTGYRLHCEGWRSIYCTP------------ 456 (697)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g---G~~~~svtED~~t~~~l~~~Gwrsvy~~~------------ 456 (697)
+++ | ||+.+|+|||+++|+||+.+|||+.|+--
T Consensus 253 --------------~~~------------------gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~ 300 (703)
T PRK15489 253 --------------MKE------------------RGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWF 300 (703)
T ss_pred --------------HHh------------------cCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccc
Confidence 111 3 58889999999999999999999999321
Q ss_pred ---------CCCceeeecCCCHHHHHHHHHHHccCcc-hhh
Q 045732 457 ---------DRPAFYGDAPITLFDFINQYKRWAIGGL-QMA 487 (697)
Q Consensus 457 ---------~~~~~~g~aP~tl~~~l~Qr~RWa~G~l-qi~ 487 (697)
...+..+..|.|+++.++||.||..|-. |-.
T Consensus 301 ~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 301 GPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred cccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1245678899999999999999999987 664
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.94 E-value=8.4e-26 Score=224.79 Aligned_cols=193 Identities=18% Similarity=0.213 Sum_probs=155.3
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|.|+|+||+ |||+.. +.++|.|+++++||+ ++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vsviip~---~n~~~~-l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~---------------------- 52 (196)
T cd02520 1 PGVSILKPL---CGVDPN-LYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLI---------------------- 52 (196)
T ss_pred CCeEEEEec---CCCCcc-HHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHH----------------------
Confidence 789999999 999975 679999999999997 8999999999997743332210
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
+ +||.+
T Consensus 53 --------------------~---------------------------------------~~~~~--------------- 58 (196)
T cd02520 53 --------------------A---------------------------------------KYPNV--------------- 58 (196)
T ss_pred --------------------H---------------------------------------HCCCC---------------
Confidence 0 00000
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCc
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQ 329 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq 329 (697)
.+.++..+++.| ..+|++|+|.|++. ++||+++++|+|+.++ |++|.+++..+.++ ++++|++.
T Consensus 59 ----~~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~- 122 (196)
T cd02520 59 ----DARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDP----GVGLVTCL- 122 (196)
T ss_pred ----cEEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCC----CCCeEEee-
Confidence 133444443322 34799999999997 7899999999999995 99999999998776 47777753
Q ss_pred eeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhh
Q 045732 330 RFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLA 409 (697)
Q Consensus 330 ~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (697)
+..|+++++||+++.++
T Consensus 123 --------------------------------~~~g~~~~~r~~~~~~~------------------------------- 139 (196)
T cd02520 123 --------------------------------CAFGKSMALRREVLDAI------------------------------- 139 (196)
T ss_pred --------------------------------cccCceeeeEHHHHHhc-------------------------------
Confidence 45688999999999887
Q ss_pred ccccccccccccccccccCccC--CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 410 HHVASCNYENRTNWGSKMGFRY--GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 410 ~~~~~~~ye~~t~wg~~gG~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||+. ..+.||++.++++..+||++.|+++ +.++...|.+++++++||.||++.
T Consensus 140 -----------------ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 140 -----------------GGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -----------------cChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 88974 3568999999999999999999987 458899999999999999999874
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.93 E-value=4.8e-25 Score=221.55 Aligned_cols=224 Identities=19% Similarity=0.181 Sum_probs=165.7
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||| |||+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+..+
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~--------------------------- 49 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFA--------------------------- 49 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHH---------------------------
Confidence 68999 9998 6789999999999999988999999999999763222100
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
.. ...+
T Consensus 50 ---------------~~-----------------------------------------------------------~~~~ 55 (229)
T cd04192 50 ---------------AA-----------------------------------------------------------KPNF 55 (229)
T ss_pred ---------------Hh-----------------------------------------------------------CCCc
Confidence 00 0012
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
++.++.++.. ...+|+.++|.+++. +++|+|+++|+|.++. |++|++++..+.++ ..+.|+++..+..
T Consensus 56 ~v~~~~~~~~---~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~ 123 (229)
T cd04192 56 QLKILNNSRV---SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKE----QIGLVAGPVIYFK 123 (229)
T ss_pred ceEEeeccCc---ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcC----CCcEEeeeeeecC
Confidence 3555555431 257899999999997 7899999999999995 99999999988765 4677777776652
Q ss_pred CCcc-hHHHHHHHHHHHHHHHHHhhcCCe-eeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcc
Q 045732 334 LSSN-DIYAAEFRRLFFVNLLGFDGLKGA-TYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHH 411 (697)
Q Consensus 334 ~~~~-d~~~~~~~~f~~~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (697)
.+.. ..+......+......+...++.+ .+.|++.++||+++.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~--------------------------------- 170 (229)
T cd04192 124 GKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEV--------------------------------- 170 (229)
T ss_pred CccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHh---------------------------------
Confidence 2111 111111111111222333344444 45788899999999987
Q ss_pred ccccccccccccccccCccC--CCccchHHHHHHHHhCCc-EEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 412 VASCNYENRTNWGSKMGFRY--GSLTEDYYTGYRLHCEGW-RSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 412 ~~~~~ye~~t~wg~~gG~~~--~svtED~~t~~~l~~~Gw-rsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||++ ...+||.+..+++..+|| ++.|++.+...++...|++++++++||+||++|
T Consensus 171 ---------------ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 171 ---------------GGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred ---------------cCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 99975 367899999999999999 999986655668899999999999999999988
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=5e-24 Score=216.16 Aligned_cols=229 Identities=19% Similarity=0.202 Sum_probs=161.6
Q ss_pred ceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccc
Q 045732 91 ALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETY 170 (697)
Q Consensus 91 ~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~y 170 (697)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+.
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~------------------------ 49 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQT------------------------ 49 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhh------------------------
Confidence 48999999 9999778899999999999 4 579999999998652222110
Q ss_pred cccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCC
Q 045732 171 FSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGH 250 (697)
Q Consensus 171 f~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~ 250 (697)
+
T Consensus 50 ------------------~------------------------------------------------------------- 50 (235)
T cd06434 50 ------------------V------------------------------------------------------------- 50 (235)
T ss_pred ------------------c-------------------------------------------------------------
Confidence 0
Q ss_pred CcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCce
Q 045732 251 FLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQR 330 (697)
Q Consensus 251 ~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~ 330 (697)
..+.+.++. ++ +++|++|+|.|++. +++|+|+++|+|..+. |++|++++..|.|+ +++.|++.+.
T Consensus 51 ~~~~~~v~~-~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~----~v~~v~~~~~ 115 (235)
T cd06434 51 KYGGIFVIT-VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDP----KVGGVGTNQR 115 (235)
T ss_pred cCCcEEEEe-cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCC----CEeEEcCceE
Confidence 001133332 22 47899999999997 7999999999999995 99999999999876 6999999888
Q ss_pred eccCCcchHHHHHHHHHHHH----HHHHHhhcCCe-eeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 045732 331 FRGLSSNDIYAAEFRRLFFV----NLLGFDGLKGA-TYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSI 405 (697)
Q Consensus 331 f~n~~~~d~~~~~~~~f~~~----~~~g~~~~~~~-~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (697)
..+.+.. .+......++.. ........++. .+.|.+.++||+++.+...
T Consensus 116 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~------------------------- 169 (235)
T cd06434 116 ILRPRDS-KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLF------------------------- 169 (235)
T ss_pred eecCccc-HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhh-------------------------
Confidence 7765321 111111112111 11222333333 3456677899999976410
Q ss_pred HhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcch
Q 045732 406 LSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQ 485 (697)
Q Consensus 406 ~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lq 485 (697)
.+. +.+ .++ +|+. ....||.+++.+++.+||+..|++.. .++..+|.++.++++||.||++|..+
T Consensus 170 ~~~--------~~~--~~~--~~~~-~~~~eD~~l~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 170 LEE--------FTN--ETF--MGRR-LNAGDDRFLTRYVLSHGYKTVYQYTS--EAYTETPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred HHH--------hhh--hhh--cCCC-CCcCchHHHHHHHHHCCCeEEEecCC--eEEEEcchhHHHHHHHhhhhhhcccC
Confidence 000 000 000 3333 45789999999999999999999974 47888999999999999999999864
No 32
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=4.2e-22 Score=219.44 Aligned_cols=233 Identities=22% Similarity=0.125 Sum_probs=158.6
Q ss_pred CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccC
Q 045732 86 PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 86 ~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
++..|+|+|+||+ |||+ +.+.+|+.|+++++||. +++|+|+|||++|.|.+.+.+..
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~------------------ 92 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAA------------------ 92 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHH------------------
Confidence 4578999999999 9999 57789999999999996 48999999999998743222210
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
+.+ |
T Consensus 93 ---------------------~~~----------------~--------------------------------------- 96 (384)
T TIGR03469 93 ---------------------RAY----------------G--------------------------------------- 96 (384)
T ss_pred ---------------------Hhc----------------C---------------------------------------
Confidence 000 0
Q ss_pred CCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCC-----CCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCC
Q 045732 246 DTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTN-----APIILTLDCDTSSNDPQTPLRVLCYVSNPVTRS 320 (697)
Q Consensus 246 ~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~-----ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~ 320 (697)
..+++++++.+.++ .+..+|+.|+|.+++. +. +|+++++|||+.++ |+.|++++..+.++.
T Consensus 97 -----~~~~i~vi~~~~~~-~g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~--- 162 (384)
T TIGR03469 97 -----RGDRLTVVSGQPLP-PGWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG--- 162 (384)
T ss_pred -----CCCcEEEecCCCCC-CCCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC---
Confidence 00124444433221 1247899999999997 45 99999999999995 999999999998652
Q ss_pred cEEEEecCceeccCCcchH-HHHHHHHHHHHHH---HHHhhc-CCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCC
Q 045732 321 NLSFVQFPQRFRGLSSNDI-YAAEFRRLFFVNL---LGFDGL-KGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYA 395 (697)
Q Consensus 321 ~v~~VQ~pq~f~n~~~~d~-~~~~~~~f~~~~~---~g~~~~-~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~ 395 (697)
+++|....++......+. .......++.... ...+.. ......|.+.++||++++++
T Consensus 163 -~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~v----------------- 224 (384)
T TIGR03469 163 -LDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERI----------------- 224 (384)
T ss_pred -CCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHc-----------------
Confidence 455544333322111011 0001111111111 111111 12235688889999999988
Q ss_pred CCCCCCchhHHhhhccccccccccccccccccCccC--CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHH
Q 045732 396 VDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRY--GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFI 473 (697)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l 473 (697)
|||+. ..+.||.+++.++.++|+++.+.... .......-+++++.+
T Consensus 225 -------------------------------GGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~~~~~~~~~ 272 (384)
T TIGR03469 225 -------------------------------GGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRPYDGLGEIW 272 (384)
T ss_pred -------------------------------CCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEecCCHHHHH
Confidence 99975 46899999999999999999998754 233444567999999
Q ss_pred HHHHHHcc
Q 045732 474 NQYKRWAI 481 (697)
Q Consensus 474 ~Qr~RWa~ 481 (697)
+|+.||..
T Consensus 273 ~~~~r~~~ 280 (384)
T TIGR03469 273 RMIARTAY 280 (384)
T ss_pred HHHHHhHH
Confidence 99999953
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.91 E-value=4.9e-23 Score=211.48 Aligned_cols=226 Identities=18% Similarity=0.214 Sum_probs=164.9
Q ss_pred CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccC
Q 045732 86 PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 86 ~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
.+..|+++|+||+ |||+ ..+.+++.++.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 25 ~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~-------------------- 80 (251)
T cd06439 25 PAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE-------------------- 80 (251)
T ss_pred CCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH--------------------
Confidence 3568999999999 9999 577899999999999998899999999999976211111
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
+.+
T Consensus 81 -----------------------~~~------------------------------------------------------ 83 (251)
T cd06439 81 -----------------------YAD------------------------------------------------------ 83 (251)
T ss_pred -----------------------Hhh------------------------------------------------------
Confidence 100
Q ss_pred CCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 045732 246 DTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFV 325 (697)
Q Consensus 246 ~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~V 325 (697)
. ++.++..++ +.+|++|+|.+++. +++|+|+++|+|.+++ |++|.+++..+.++ ++++|
T Consensus 84 -----~--~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v 142 (251)
T cd06439 84 -----K--GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADP----SVGAV 142 (251)
T ss_pred -----C--cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCC----CccEE
Confidence 0 134444444 46799999999997 7899999999999996 99999999999765 57888
Q ss_pred ecCceeccCCcchHHHHHHHHHHHHHHHHHhhcCC-eeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 045732 326 QFPQRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKG-ATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPS 404 (697)
Q Consensus 326 Q~pq~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (697)
++.....+.+...........+...+.......+. ....|++.++||+++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------------------- 195 (251)
T cd06439 143 SGELVIVDGGGSGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFRP--------------------------- 195 (251)
T ss_pred EeEEEecCCcccchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhcC---------------------------
Confidence 87766554321001001111111112111222222 22344445578988853
Q ss_pred HHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcc
Q 045732 405 ILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGL 484 (697)
Q Consensus 405 ~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~l 484 (697)
|+.....||.++++++..+||++.|.++ +..+...|.+.+++++|+.||+.|++
T Consensus 196 ------------------------~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~~g~~ 249 (251)
T cd06439 196 ------------------------LPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRRRVRIAAGNL 249 (251)
T ss_pred ------------------------CCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHHHHHHHhccc
Confidence 4445568999999999999999999987 45899999999999999999999999
Q ss_pred hh
Q 045732 485 QM 486 (697)
Q Consensus 485 qi 486 (697)
|.
T Consensus 250 ~~ 251 (251)
T cd06439 250 QA 251 (251)
T ss_pred cC
Confidence 83
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=5.6e-19 Score=191.87 Aligned_cols=202 Identities=20% Similarity=0.294 Sum_probs=155.6
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEecCceec
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQFPQRFR 332 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ~pq~f~ 332 (697)
++.|-.|.+| -+.||||+....+..| +.+++++++|||+++. +|.+.+++..|+ || +.|++||-..-.
T Consensus 213 ~ifYRrRr~n----~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P----~aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRRN----VKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANP----DAGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhhh----hcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCC----CCceeecchhhc
Confidence 4777777665 6889999999999988 8999999999999997 999999999987 44 789999976555
Q ss_pred cCCcchHHH---HHHHHHHHH-HHHHHhhcCC--eeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHH
Q 045732 333 GLSSNDIYA---AEFRRLFFV-NLLGFDGLKG--ATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSIL 406 (697)
Q Consensus 333 n~~~~d~~~---~~~~~f~~~-~~~g~~~~~~--~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (697)
|.+ ..|+ +-..-.|+. ...|..-|++ .-|-|.|+++|.+++.+.+ .++-++
T Consensus 282 gg~--TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hc------gLp~Lp--------------- 338 (736)
T COG2943 282 GGD--TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHC------GLPPLP--------------- 338 (736)
T ss_pred Ccc--hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhc------CCCCCC---------------
Confidence 543 2333 222334554 4568888876 4689999999999996542 111121
Q ss_pred hhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchh
Q 045732 407 SLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQM 486 (697)
Q Consensus 407 ~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi 486 (697)
| +|.|.+..++.|+..+-.|.+.||-+--.++ +...+++.|.|+-+.+++-+|||+|++|.
T Consensus 339 -----------------G-~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~PpnLlD~l~RDRRWC~GNLqh 399 (736)
T COG2943 339 -----------------G-RGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPPNLLDELKRDRRWCHGNLQH 399 (736)
T ss_pred -----------------C-CCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCchHHHHHhhhhHhhhcchhh
Confidence 1 1568878899999999999999998866554 56789999999999999999999999998
Q ss_pred hhhccCcccccCCCchH-HHHHHHHHHHH
Q 045732 487 AFARYSPFTVGTKTIGL-MGLAYGHYAIW 514 (697)
Q Consensus 487 ~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~ 514 (697)
+. ++ +.+++.+ .|+.+....+.
T Consensus 400 ~r-----l~-~~~GlHwvsR~h~~tGVms 422 (736)
T COG2943 400 FR-----LF-LVKGLHWVSRAHFLTGVMS 422 (736)
T ss_pred ce-----ee-ccCCccHHHHHHHHHHHHH
Confidence 64 23 2478888 77776655443
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.87 E-value=4e-21 Score=195.51 Aligned_cols=224 Identities=18% Similarity=0.166 Sum_probs=161.8
Q ss_pred ceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccc
Q 045732 91 ALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETY 170 (697)
Q Consensus 91 ~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~y 170 (697)
+++|+||+ |||+. .+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+
T Consensus 1 ~~sIiip~---~n~~~-~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~------------------------- 51 (249)
T cd02525 1 FVSIIIPV---RNEEK-YIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQE------------------------- 51 (249)
T ss_pred CEEEEEEc---CCchh-hHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHH-------------------------
Confidence 48999999 99984 67899999999999977899999999999965211111
Q ss_pred cccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCC
Q 045732 171 FSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGH 250 (697)
Q Consensus 171 f~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~ 250 (697)
+. .
T Consensus 52 ------------------~~---~-------------------------------------------------------- 54 (249)
T cd02525 52 ------------------YA---A-------------------------------------------------------- 54 (249)
T ss_pred ------------------HH---h--------------------------------------------------------
Confidence 00 0
Q ss_pred CcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCce
Q 045732 251 FLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQR 330 (697)
Q Consensus 251 ~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~ 330 (697)
..|.+.++..+ ++++++|+|.|++. +++|+++++|+|.++ +|++|.+++..+.++ +...|+++..
T Consensus 55 ~~~~v~~i~~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~----~~~~v~~~~~ 119 (249)
T cd02525 55 KDPRIRLIDNP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYILELVEALKRT----GADNVGGPME 119 (249)
T ss_pred cCCeEEEEeCC------CCCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHHHHHHHHhcC----CCCEEeccee
Confidence 01235555533 35689999999997 789999999999999 599999999888776 3455555443
Q ss_pred eccCCcchHHHHHHHH-HHHHHHHH---HhhcC---CeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 045732 331 FRGLSSNDIYAAEFRR-LFFVNLLG---FDGLK---GATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSP 403 (697)
Q Consensus 331 f~n~~~~d~~~~~~~~-f~~~~~~g---~~~~~---~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (697)
..+.+ ........ .......+ ..... .....|.+.++||+++.++
T Consensus 120 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 171 (249)
T cd02525 120 TIGES---KFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKV------------------------- 171 (249)
T ss_pred cCCCC---hHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHh-------------------------
Confidence 22211 11111111 11000011 11111 2245678888999999876
Q ss_pred hHHhhhccccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 404 SILSLAHHVASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 404 ~~~~~~~~~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||++. ...||.+.+++++++|+++.|+++. .+....|.+++++++|+.||+.|
T Consensus 172 -----------------------g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~--~~~~~~~~s~~~~~~~~~r~~~~ 226 (249)
T cd02525 172 -----------------------GGFDESLVRNEDAELNYRLRKAGYKIWLSPDI--RVYYYPRSTLKKLARQYFRYGKW 226 (249)
T ss_pred -----------------------CCCCcccCccchhHHHHHHHHcCcEEEEcCCe--EEEEcCCCCHHHHHHHHHHHhhh
Confidence 778765 4579999999999999999999974 47778899999999999999999
Q ss_pred cchhhh
Q 045732 483 GLQMAF 488 (697)
Q Consensus 483 ~lqi~~ 488 (697)
..|+..
T Consensus 227 ~~~~~~ 232 (249)
T cd02525 227 RARTLR 232 (249)
T ss_pred hHHHHH
Confidence 999987
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.83 E-value=1.9e-19 Score=178.90 Aligned_cols=118 Identities=23% Similarity=0.161 Sum_probs=86.1
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcc-------cCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEe
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSA-------TMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQ 326 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~-------~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ 326 (697)
+++++.++... .+.+|++|+|.+++.+. ...++|+|+++|||..++ |++|+++..+|.|| +++.||
T Consensus 51 ~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~ 123 (191)
T cd06436 51 RVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDP----RVAGTQ 123 (191)
T ss_pred cEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCC----ceEEEe
Confidence 35566654211 14689999999999741 011358999999999995 99999998889887 689999
Q ss_pred cCceeccCCcch--HH-HHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCC
Q 045732 327 FPQRFRGLSSND--IY-AAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGS 378 (697)
Q Consensus 327 ~pq~f~n~~~~d--~~-~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i 378 (697)
++.++.|.+.+- .+ ..+....+..++.++...+...++|+|++|||++|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~v 178 (191)
T cd06436 124 SRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDGL 178 (191)
T ss_pred eeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHHh
Confidence 999888865432 11 12333344566777777776667999999999999876
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.81 E-value=2.4e-19 Score=176.28 Aligned_cols=164 Identities=20% Similarity=0.157 Sum_probs=115.3
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||+ |||+ ..+.+||.++++++||.++++|+|+|||++|.|.+.+.+
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~---------------------------- 48 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA---------------------------- 48 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH----------------------------
Confidence 68999 9999 678899999999999988899999999999977211110
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
+ .
T Consensus 49 ---------------~----------------~----------------------------------------------- 50 (183)
T cd06438 49 ---------------A----------------G----------------------------------------------- 50 (183)
T ss_pred ---------------c----------------C-----------------------------------------------
Confidence 0 0
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcc-cCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceec
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSA-TMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFR 332 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~-~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~ 332 (697)
..++.+.+. ++++|++|+|.+++.+. ..+++|+++++|||+.++ |++|.+++..|.+. ...||+.....
T Consensus 51 -~~~~~~~~~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~ 120 (183)
T cd06438 51 -ATVLERHDP---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSK 120 (183)
T ss_pred -CeEEEeCCC---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeee
Confidence 001112211 25789999999998741 114699999999999995 99999999998753 34678766665
Q ss_pred cCCcchH---HHHHHHHHHHHHHHHHhhcCCe-eeeeeeEeeehhhhcC
Q 045732 333 GLSSNDI---YAAEFRRLFFVNLLGFDGLKGA-TYVGTGTFFCRRALFG 377 (697)
Q Consensus 333 n~~~~d~---~~~~~~~f~~~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~ 377 (697)
+.+.+.. ..-....++.....++..+++. .+.|+|.++||+++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~ 169 (183)
T cd06438 121 NPDDSWITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLRQ 169 (183)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHHh
Confidence 5432211 1112222334445567777765 4689999999999975
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.79 E-value=1.6e-18 Score=171.56 Aligned_cols=137 Identities=31% Similarity=0.454 Sum_probs=111.0
Q ss_pred EEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHHH----HHHHHHhhcCCe-eee
Q 045732 290 IILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLFF----VNLLGFDGLKGA-TYV 364 (697)
Q Consensus 290 ~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~g~~~~~~~-~~~ 364 (697)
+|+++|||+.++ ||++++++.++.|| ++++||+|..+.|. ++.+.+-+...+. ......+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~----~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDP----KVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCC----CceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999995 99999999999876 69999999998743 2223222222221 112333444443 468
Q ss_pred eeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccCcc-CCCccchHHHHHH
Q 045732 365 GTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFR-YGSLTEDYYTGYR 443 (697)
Q Consensus 365 Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~-~~svtED~~t~~~ 443 (697)
|+|.++||+++.++ |||+ +.+++||++++++
T Consensus 74 G~~~~~r~~~l~~v------------------------------------------------g~~~~~~~~~ED~~l~~~ 105 (193)
T PF13632_consen 74 GSGMLFRREALREV------------------------------------------------GGFDDPFSIGEDMDLGFR 105 (193)
T ss_pred CcceeeeHHHHHHh------------------------------------------------CcccccccccchHHHHHH
Confidence 99999999999987 8999 8899999999999
Q ss_pred HHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCc
Q 045732 444 LHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGG 483 (697)
Q Consensus 444 l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~ 483 (697)
+.++|||+.|+++. .+++.+|+|+.++++||+||..|.
T Consensus 106 l~~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 106 LRRAGYRIVYVPDA--IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred HHHCCCEEEEeccc--ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99999999999974 489999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.76 E-value=1.1e-17 Score=165.60 Aligned_cols=194 Identities=20% Similarity=0.228 Sum_probs=135.3
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|+|+|+||+ |||+.+.+++|+.|+++++||. .+|+|+|||++|.|.+.+.+
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~------------------------ 51 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLK------------------------ 51 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHH------------------------
Confidence 679999999 9999667889999999999986 78999999999854211111
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
.|.+
T Consensus 52 ------------------~~~~---------------------------------------------------------- 55 (202)
T cd04184 52 ------------------KYAA---------------------------------------------------------- 55 (202)
T ss_pred ------------------HHHh----------------------------------------------------------
Confidence 1110
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh-cCCCCCCcEEEEecC
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV-SNPVTRSNLSFVQFP 328 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~dp~~~~~v~~VQ~p 328 (697)
..+++.++..+. +.+++.|+|.|++. +++|+++++|+|.++. |++|.+++..+ .++ ++++|.+.
T Consensus 56 -~~~~~~~~~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~ 120 (202)
T cd04184 56 -QDPRIKVVFREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHP----DADLIYSD 120 (202)
T ss_pred -cCCCEEEEEccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCC----CCCEEEcc
Confidence 012245555544 47899999999997 7899999999999995 99999999988 565 46666554
Q ss_pred ceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhh
Q 045732 329 QRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSL 408 (697)
Q Consensus 329 q~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (697)
......+.. ... . .+..... .+......+.|.+.++||+++.++
T Consensus 121 ~~~~~~~~~-~~~-~---~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~i------------------------------ 164 (202)
T cd04184 121 EDKIDEGGK-RSE-P---FFKPDWS-PDLLLSQNYIGHLLVYRRSLVRQV------------------------------ 164 (202)
T ss_pred HHhccCCCC-Eec-c---ccCCCCC-HHHhhhcCCccceEeEEHHHHHHh------------------------------
Confidence 433221110 000 0 0000000 000011134566778999999887
Q ss_pred hccccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCC
Q 045732 409 AHHVASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 409 ~~~~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||+.+ ...||++.++|+..+||+.+|+++.
T Consensus 165 ------------------ggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~ 196 (202)
T cd04184 165 ------------------GGFREGFEGAQDYDLVLRVSEHTDRIAHIPRV 196 (202)
T ss_pred ------------------CCCCcCcccchhHHHHHHHHhccceEEEccHh
Confidence 889765 4689999999999999999999873
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.73 E-value=5.8e-17 Score=160.45 Aligned_cols=136 Identities=19% Similarity=0.154 Sum_probs=97.2
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccC
Q 045732 255 LIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGL 334 (697)
Q Consensus 255 l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~ 334 (697)
+.++..++| .|+++|+|.|++. ++||+|+++|+|.++. |++|.+++..|.+. +++++|.+.....+.
T Consensus 57 i~~i~~~~n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~ 123 (201)
T cd04195 57 LKVVPLEKN-----RGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKN---PEIDIVGGGVLEFDS 123 (201)
T ss_pred eEEEEcCcc-----ccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhC---CCeEEEcccEEEECC
Confidence 556666653 6899999999997 7899999999999995 99999999998631 257888776654432
Q ss_pred CcchHHH----HHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhc
Q 045732 335 SSNDIYA----AEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAH 410 (697)
Q Consensus 335 ~~~d~~~----~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (697)
+...... ......+.. . .....++|.+.++||+++.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~rr~~~~~~-------------------------------- 165 (201)
T cd04195 124 DGNDIGKRRLPTSHDDILKF---A---RRRSPFNHPTVMFRKSKVLAV-------------------------------- 165 (201)
T ss_pred CCCeeccccCCCCHHHHHHH---h---ccCCCCCChHHhhhHHHHHHc--------------------------------
Confidence 2211100 001111111 1 112223556678999999877
Q ss_pred cccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCC
Q 045732 411 HVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 411 ~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||......||+++.+++..+|+++.|+++.
T Consensus 166 ----------------g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~ 196 (201)
T cd04195 166 ----------------GGYQDLPLVEDYALWARMLANGARFANLPEI 196 (201)
T ss_pred ----------------CCcCCCCCchHHHHHHHHHHcCCceecccHH
Confidence 8898878999999999999999999999863
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.69 E-value=3.7e-16 Score=165.99 Aligned_cols=200 Identities=18% Similarity=0.112 Sum_probs=135.1
Q ss_pred eEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccccc
Q 045732 93 DVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFS 172 (697)
Q Consensus 93 dV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~ 172 (697)
+|+||+ |||+++.+.+||.|++++.+|....+|+|+|||++|.|.+.+.+.
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~-------------------------- 51 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEE-------------------------- 51 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHH--------------------------
Confidence 589999 999977889999999999998766799999999999763222210
Q ss_pred cccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCc
Q 045732 173 LNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFL 252 (697)
Q Consensus 173 ~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~ 252 (697)
+.. ...
T Consensus 52 ----------------~~~----------------------------------------------------------~~~ 57 (299)
T cd02510 52 ----------------YYK----------------------------------------------------------KYL 57 (299)
T ss_pred ----------------HHh----------------------------------------------------------hcC
Confidence 000 012
Q ss_pred CeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCcee-
Q 045732 253 PNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRF- 331 (697)
Q Consensus 253 p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f- 331 (697)
|+++++..++ +.|++.|.|.|++. +.||+|+++|+|++++ |++|.+++..+.+.. . ++| +|...
T Consensus 58 ~~v~vi~~~~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~~~---~-~~v-~p~~~~ 122 (299)
T cd02510 58 PKVKVLRLKK-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAENR---K-TVV-CPIIDV 122 (299)
T ss_pred CcEEEEEcCC-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHhCC---C-eEE-Eeeecc
Confidence 3466776665 37899999999997 8999999999999995 999999999886432 2 222 23211
Q ss_pred --------ccCCc--c---h-HHHHHHHHHH-HHHHHHH--hhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCC
Q 045732 332 --------RGLSS--N---D-IYAAEFRRLF-FVNLLGF--DGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNY 394 (697)
Q Consensus 332 --------~n~~~--~---d-~~~~~~~~f~-~~~~~g~--~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~ 394 (697)
.+... . + .+........ ....... .....+...|.+.++||+++.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~v---------------- 186 (299)
T cd02510 123 IDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLEL---------------- 186 (299)
T ss_pred ccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHh----------------
Confidence 11000 0 0 0000000000 0000000 11223456687788999999987
Q ss_pred CCCCCCCchhHHhhhccccccccccccccccccCccCCCc---cchHHHHHHHHhCCcEEEEeCCCC
Q 045732 395 AVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSL---TEDYYTGYRLHCEGWRSIYCTPDR 458 (697)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~sv---tED~~t~~~l~~~Gwrsvy~~~~~ 458 (697)
|||+++-. .||++.++|+..+||+++|++++.
T Consensus 187 --------------------------------GgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~ 221 (299)
T cd02510 187 --------------------------------GGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSR 221 (299)
T ss_pred --------------------------------CCCCCcccccCchhHHHHHHHHHcCCeEEEeeccE
Confidence 89987642 499999999999999999999753
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.66 E-value=1.3e-15 Score=148.97 Aligned_cols=187 Identities=22% Similarity=0.199 Sum_probs=131.5
Q ss_pred eEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccccc
Q 045732 93 DVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFS 172 (697)
Q Consensus 93 dV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~ 172 (697)
+|+||| |||+ ..+++|+.|+.+++||. ++|+|+|||++|.|.+.+.+
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~--------------------------- 47 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKK--------------------------- 47 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHH---------------------------
Confidence 589999 9999 68899999999999987 89999999999976321111
Q ss_pred cccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCc
Q 045732 173 LNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFL 252 (697)
Q Consensus 173 ~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~ 252 (697)
+.+
T Consensus 48 ----------------~~~------------------------------------------------------------- 50 (202)
T cd06433 48 ----------------YED------------------------------------------------------------- 50 (202)
T ss_pred ----------------hHh-------------------------------------------------------------
Confidence 100
Q ss_pred CeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh-cCCCCCCcEEEEecCcee
Q 045732 253 PNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV-SNPVTRSNLSFVQFPQRF 331 (697)
Q Consensus 253 p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~dp~~~~~v~~VQ~pq~f 331 (697)
.+.++..++ ..++++|+|.|++. +++|+|+++|+|..+. ++.+.+++..+ .++ +.++|.+...+
T Consensus 51 -~~~~~~~~~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~----~~~~v~g~~~~ 115 (202)
T cd06433 51 -KITYWISEP-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHP----EVDVVYGDVLL 115 (202)
T ss_pred -hcEEEEecC-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCC----CccEEEeeeEE
Confidence 012223333 36899999999997 7899999999999995 99999998544 454 46667666544
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcc
Q 045732 332 RGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHH 411 (697)
Q Consensus 332 ~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (697)
.+.+........ ...............+|++.++||+++.++
T Consensus 116 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 157 (202)
T cd06433 116 VDENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEKY--------------------------------- 157 (202)
T ss_pred EcCCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHHHHh---------------------------------
Confidence 433221110000 000011112233456778889999999887
Q ss_pred ccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCC
Q 045732 412 VASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 412 ~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||+.+ ...||.+..+++..+|++++++++.
T Consensus 158 ---------------~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~ 189 (202)
T cd06433 158 ---------------GGFDESYRIAADYDLLLRLLLAGKIFKYLPEV 189 (202)
T ss_pred ---------------CCCchhhCchhhHHHHHHHHHcCCceEecchh
Confidence 778754 5689999999999999999988864
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.65 E-value=7.5e-15 Score=151.28 Aligned_cols=140 Identities=13% Similarity=-0.024 Sum_probs=89.0
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccC
Q 045732 255 LIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGL 334 (697)
Q Consensus 255 l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~ 334 (697)
+.++.+++ +.+|++|+|.|++. ++||+|+++|+|..+ +|+.|.+++..+.++ +..+|.+.....+.
T Consensus 70 v~~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~g~r~~~~~ 135 (243)
T PLN02726 70 ILLRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRET----GADIVTGTRYVKGG 135 (243)
T ss_pred EEEEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhc----CCcEEEEccccCCC
Confidence 44555544 36799999999997 789999999999998 599999999988764 34556554322211
Q ss_pred C-cchHH-HHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccc
Q 045732 335 S-SNDIY-AAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHV 412 (697)
Q Consensus 335 ~-~~d~~-~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (697)
. ....+ .......+..+..-..+.+..-.+|...++||+++..+
T Consensus 136 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~i---------------------------------- 181 (243)
T PLN02726 136 GVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALEDL---------------------------------- 181 (243)
T ss_pred CcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHHH----------------------------------
Confidence 1 01011 11111112222222222233335566668999999876
Q ss_pred cccccccccccccccCc-cCCCccchHHHHHHHHhCCcEEEEeCC
Q 045732 413 ASCNYENRTNWGSKMGF-RYGSLTEDYYTGYRLHCEGWRSIYCTP 456 (697)
Q Consensus 413 ~~~~ye~~t~wg~~gG~-~~~svtED~~t~~~l~~~Gwrsvy~~~ 456 (697)
+++ ..+...+|+++.+++..+|||+.++|.
T Consensus 182 --------------~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~ 212 (243)
T PLN02726 182 --------------VSSVVSKGYVFQMEIIVRASRKGYRIEEVPI 212 (243)
T ss_pred --------------HhhccCCCcEEehHHHHHHHHcCCcEEEeCc
Confidence 211 112345689999999999999999985
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=3.4e-15 Score=148.35 Aligned_cols=194 Identities=17% Similarity=0.153 Sum_probs=132.9
Q ss_pred eEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccccc
Q 045732 93 DVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFS 172 (697)
Q Consensus 93 dV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~ 172 (697)
+|+||| |||+ ..+.+||.|+++++|| +++|+|+|||++|.|.+.+.+
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~--------------------------- 47 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKE--------------------------- 47 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHH---------------------------
Confidence 589999 9999 5778999999999999 489999999999977432222
Q ss_pred cccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCc
Q 045732 173 LNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFL 252 (697)
Q Consensus 173 ~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~ 252 (697)
+.+ +||
T Consensus 48 ----------------~~~--------------------------------------~~~-------------------- 53 (214)
T cd04196 48 ----------------YID--------------------------------------KDP-------------------- 53 (214)
T ss_pred ----------------HHh--------------------------------------cCC--------------------
Confidence 100 000
Q ss_pred CeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh-cCCCCCCcEEEEecCcee
Q 045732 253 PNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV-SNPVTRSNLSFVQFPQRF 331 (697)
Q Consensus 253 p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~dp~~~~~v~~VQ~pq~f 331 (697)
+.+.++..++ ++|+++|+|.++.. ++||+|+++|+|.++. |+.|.+++..+ .++ ..+++.+....
T Consensus 54 ~~~~~~~~~~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~----~~~~~~~~~~~ 119 (214)
T cd04196 54 FIIILIRNGK-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDD----KPLLVYSDLEL 119 (214)
T ss_pred ceEEEEeCCC-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCC----CceEEecCcEE
Confidence 1134444444 48899999999997 8999999999999995 99999999984 444 46777776554
Q ss_pred ccCCcchHHHHHHHHHHHH--HHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhh
Q 045732 332 RGLSSNDIYAAEFRRLFFV--NLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLA 409 (697)
Q Consensus 332 ~n~~~~d~~~~~~~~f~~~--~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (697)
.+.+... ........... ............+.|+++++||+++.++
T Consensus 120 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~------------------------------- 167 (214)
T cd04196 120 VDENGNP-IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELA------------------------------- 167 (214)
T ss_pred ECCCCCC-cccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhh-------------------------------
Confidence 4322110 00000000000 0001111223456788899999999887
Q ss_pred ccccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCC
Q 045732 410 HHVASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 410 ~~~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|+++.. ...||..+.+++.. |++..|+++.
T Consensus 168 -----------------~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~ 198 (214)
T cd04196 168 -----------------LPFPDADVIMHDWWLALLASA-FGKVVFLDEP 198 (214)
T ss_pred -----------------ccccccccccchHHHHHHHHH-cCceEEcchh
Confidence 777766 67899999988877 6688888863
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=5.2e-15 Score=148.46 Aligned_cols=121 Identities=21% Similarity=0.137 Sum_probs=82.8
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHH
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLF 348 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~ 348 (697)
.+|++|+|.|++. +++|+|+++|+|..+. |+++.+++..+.++ ....+.....+.+....... .
T Consensus 58 ~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~-------~ 121 (221)
T cd02522 58 KGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRAD----GAVAGAFRLRFDDPGPRLRL-------L 121 (221)
T ss_pred cCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcC----CcEEEEEEeeecCCccchhh-------h
Confidence 5699999999997 7899999999999995 99999987766654 23333322223322111000 1
Q ss_pred HHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccC
Q 045732 349 FVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMG 428 (697)
Q Consensus 349 ~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG 428 (697)
...........+..+.+.|.++||+++.++ ||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~------------------------------------------------G~ 153 (221)
T cd02522 122 ELGANLRSRLFGLPYGDQGLFIRRELFEEL------------------------------------------------GG 153 (221)
T ss_pred hhcccceecccCCCcCCceEEEEHHHHHHh------------------------------------------------CC
Confidence 100111111222234456778899999887 89
Q ss_pred ccCCCccchHHHHHHHHhCCcEEEE
Q 045732 429 FRYGSLTEDYYTGYRLHCEGWRSIY 453 (697)
Q Consensus 429 ~~~~svtED~~t~~~l~~~Gwrsvy 453 (697)
|++....||++.++++...|+++.+
T Consensus 154 fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 154 FPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred CCccccccHHHHHHHHHhCCCEEEc
Confidence 9988899999999999999999876
No 46
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.64 E-value=3e-15 Score=147.81 Aligned_cols=154 Identities=21% Similarity=0.231 Sum_probs=118.7
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHH
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRL 347 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f 347 (697)
.+.|.+||..+++. . +++|++++.|+|..++ |++|++++..+.|| ++|+|.++....+.+. ..+.-...+
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p----~vglVt~~~~~~~~~~--~~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADP----GVGLVTGLPRGVPARG--FWSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCC----CCcEEEecccccCCcC--HHHHHHHHH
Confidence 57899999999995 2 7999999999999995 99999999999998 5899987666554332 221111122
Q ss_pred HHHHHHHHh-hcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccc
Q 045732 348 FFVNLLGFD-GLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSK 426 (697)
Q Consensus 348 ~~~~~~g~~-~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~ 426 (697)
+.....-.. .-+..++.|...++||++|+++
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~~------------------------------------------------ 116 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREALEEI------------------------------------------------ 116 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHHHHc------------------------------------------------
Confidence 221111111 2245678899999999999987
Q ss_pred cCccC--CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecC----CCHHHHHHHHHHHcc
Q 045732 427 MGFRY--GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAP----ITLFDFINQYKRWAI 481 (697)
Q Consensus 427 gG~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP----~tl~~~l~Qr~RWa~ 481 (697)
|||.. +.++||+.+|-+++.+|||++..+. +......| .+++++++++.||++
T Consensus 117 GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 117 GGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 88875 6899999999999999999999985 34556666 489999999999985
No 47
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=6.3e-15 Score=139.85 Aligned_cols=100 Identities=20% Similarity=0.185 Sum_probs=84.1
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHH
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRL 347 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f 347 (697)
+.++++|+|.+++. +++|+++++|+|.++. |+++.+++..+.+. ++++++++.
T Consensus 59 ~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~---~~~~~~~~~------------------- 111 (166)
T cd04186 59 NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQD---PDVGIVGPK------------------- 111 (166)
T ss_pred CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhC---CCceEEEcc-------------------
Confidence 47899999999997 7899999999999995 99999999866532 257777543
Q ss_pred HHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccccccccccc
Q 045732 348 FFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM 427 (697)
Q Consensus 348 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g 427 (697)
++|++.++||+++.++ |
T Consensus 112 ---------------~~~~~~~~~~~~~~~~------------------------------------------------~ 128 (166)
T cd04186 112 ---------------VSGAFLLVRREVFEEV------------------------------------------------G 128 (166)
T ss_pred ---------------CceeeEeeeHHHHHHc------------------------------------------------C
Confidence 6788899999999887 7
Q ss_pred CccCCC--ccchHHHHHHHHhCCcEEEEeCCC
Q 045732 428 GFRYGS--LTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 428 G~~~~s--vtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
||+... ..||.+.++++..+||++.++++.
T Consensus 129 ~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~ 160 (166)
T cd04186 129 GFDEDFFLYYEDVDLCLRARLAGYRVLYVPQA 160 (166)
T ss_pred CCChhhhccccHHHHHHHHHHcCCeEEEccce
Confidence 887653 569999999999999999999863
No 48
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.62 E-value=2.5e-14 Score=144.40 Aligned_cols=201 Identities=15% Similarity=0.040 Sum_probs=127.4
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||+ |||+ ..+.+|+.|+++++||. .++|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~---------------------------- 47 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEK---------------------------- 47 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHH----------------------------
Confidence 68999 9998 68899999999999994 589999999999987422222
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
|.+ +. ..+
T Consensus 48 ---------------~~~---~~------------------------------------------------------~~~ 55 (219)
T cd06913 48 ---------------WRK---KL------------------------------------------------------EDS 55 (219)
T ss_pred ---------------HHH---hC------------------------------------------------------ccc
Confidence 110 00 001
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
++.++..+.+.+ .+.|.+.|.|.|++. ++||+++++|+|..+. |+.+.+.+..+.+.. .++|-.+.....
T Consensus 56 ~~~~~~~~~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~ 125 (219)
T cd06913 56 GVIVLVGSHNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQHP----NSIIGCQVRRIP 125 (219)
T ss_pred CeEEEEecccCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHhCC----CcEEEEEEEecC
Confidence 244444332211 246899999999997 8999999999999995 999998877665421 123322111111
Q ss_pred CCcchHHHHHHHHH-HHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccc
Q 045732 334 LSSNDIYAAEFRRL-FFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHV 412 (697)
Q Consensus 334 ~~~~d~~~~~~~~f-~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (697)
.+....+....... ...+........++.....+.++||+++.++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~---------------------------------- 171 (219)
T cd06913 126 EDSTERYTRWINTLTREQLLTQVYTSHGPTVIMPTWFCSREWFSHV---------------------------------- 171 (219)
T ss_pred cccchhhHHHHHhcCHHHHHHHHHhhcCCccccccceeehhHHhhc----------------------------------
Confidence 11111111100000 0001111112233333344567899999887
Q ss_pred cccccccccccccccCccCC--CccchHHHHHHHHhCCcEEEEeCCC
Q 045732 413 ASCNYENRTNWGSKMGFRYG--SLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 413 ~~~~ye~~t~wg~~gG~~~~--svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||+.. ...||+++.+++..+|+++.|+++.
T Consensus 172 --------------g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~ 204 (219)
T cd06913 172 --------------GPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRC 204 (219)
T ss_pred --------------CCccchhccchhHHHHHHHHHHcCCceEEEcce
Confidence 888754 3469999999999999999999875
No 49
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.61 E-value=1.6e-14 Score=145.22 Aligned_cols=194 Identities=15% Similarity=0.014 Sum_probs=126.9
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||+ |||+ ..+.+|+.++..+.|+ ..++|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9999 4678999999999993 3489999999999976321111
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
|.+ ..|
T Consensus 48 ---------------~~~-----------------------------------------------------------~~~ 53 (224)
T cd06442 48 ---------------LAK-----------------------------------------------------------EYP 53 (224)
T ss_pred ---------------HHH-----------------------------------------------------------hCC
Confidence 110 012
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
++.++..++ +.||++|+|.|++. +.||+|+++|+|..++ |+.|.+++..+.+++ .++|.++.....
T Consensus 54 ~i~~~~~~~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~ 119 (224)
T cd06442 54 RVRLIVRPG-----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG----ADLVIGSRYVEG 119 (224)
T ss_pred ceEEEecCC-----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC----CCEEEEeeeecC
Confidence 244555555 47899999999997 7899999999999995 999999999876652 345555433222
Q ss_pred CC-cchHHHHH-HHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcc
Q 045732 334 LS-SNDIYAAE-FRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHH 411 (697)
Q Consensus 334 ~~-~~d~~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (697)
.. .+...... .........+-....+.....|++.++||+++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i--------------------------------- 166 (224)
T cd06442 120 GGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAYRREVLEKL--------------------------------- 166 (224)
T ss_pred CccCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhHHHHHHH---------------------------------
Confidence 11 11111100 00001111111112233445666668899999876
Q ss_pred cccccccccccccccc-CccCCCccchHHHHHHHHhCCcEEEEeCC
Q 045732 412 VASCNYENRTNWGSKM-GFRYGSLTEDYYTGYRLHCEGWRSIYCTP 456 (697)
Q Consensus 412 ~~~~~ye~~t~wg~~g-G~~~~svtED~~t~~~l~~~Gwrsvy~~~ 456 (697)
| ++......+|.++.+++...||++.+.+.
T Consensus 167 ---------------g~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 167 ---------------IDSLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred ---------------hhhccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 3 33333446678899999999999999885
No 50
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.61 E-value=2.6e-14 Score=139.01 Aligned_cols=106 Identities=16% Similarity=0.113 Sum_probs=79.8
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHHH
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRLF 348 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~ 348 (697)
.+|++++|.+++. ++||+|+++|+|.+++ |++|.+++..+ ++ .++ |.+++...+.....
T Consensus 65 ~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~----~~~-v~g~~~~~~~~~~~---------- 123 (182)
T cd06420 65 FRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EP----GVF-LSGSRVLLNEKLTE---------- 123 (182)
T ss_pred hhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CC----CcE-Eecceeecccccce----------
Confidence 5799999999997 8999999999999995 99999999887 43 344 34444333221110
Q ss_pred HHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccC
Q 045732 349 FVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMG 428 (697)
Q Consensus 349 ~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG 428 (697)
..+.|++++++|+.+.++ ||
T Consensus 124 ------------~~~~~~~~~~~r~~~~~~------------------------------------------------gg 143 (182)
T cd06420 124 ------------RGIRGCNMSFWKKDLLAV------------------------------------------------NG 143 (182)
T ss_pred ------------eEeccceEEEEHHHHHHh------------------------------------------------CC
Confidence 345577778888888776 88
Q ss_pred ccCCC---ccchHHHHHHHHhCCcEEEEeC
Q 045732 429 FRYGS---LTEDYYTGYRLHCEGWRSIYCT 455 (697)
Q Consensus 429 ~~~~s---vtED~~t~~~l~~~Gwrsvy~~ 455 (697)
|+... -.||++.++|+..+|++..++.
T Consensus 144 f~~~~~~~~~eD~~l~~r~~~~g~~~~~~~ 173 (182)
T cd06420 144 FDEEFTGWGGEDSELVARLLNSGIKFRKLK 173 (182)
T ss_pred CCcccccCCcchHHHHHHHHHcCCcEEEec
Confidence 87653 2799999999999997766665
No 51
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.60 E-value=2.5e-14 Score=142.09 Aligned_cols=166 Identities=17% Similarity=0.134 Sum_probs=123.3
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||| |||+ ..+.+++.|++++.||. .+|+|+|||++|.|.+.+.+
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~---------------------------- 46 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTS---------------------------- 46 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHH----------------------------
Confidence 68999 9999 67899999999999995 57999999999976211111
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
+. ...+
T Consensus 47 ---------------~~-----------------------------------------------------------~~~~ 52 (202)
T cd04185 47 ---------------LG-----------------------------------------------------------DLDN 52 (202)
T ss_pred ---------------hc-----------------------------------------------------------CCCc
Confidence 00 0001
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
+.++..+++ .|++.++|.+++.+- .+++|+++++|+|.++. |+++.+++..+.++ +++++. |..+..
T Consensus 53 -i~~~~~~~n-----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~----~~~~~~-~~~~~~ 119 (202)
T cd04185 53 -IVYLRLPEN-----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKD----NPQFLA-PLVLDP 119 (202)
T ss_pred -eEEEECccc-----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcC----CceEec-ceeEcC
Confidence 445555543 678889999888642 35799999999999995 99999999998865 466663 333321
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccc
Q 045732 334 LSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVA 413 (697)
Q Consensus 334 ~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (697)
+. +++|.++||+++.++
T Consensus 120 -~~---------------------------~~~~~~~~~~~~~~~----------------------------------- 136 (202)
T cd04185 120 -DG---------------------------SFVGVLISRRVVEKI----------------------------------- 136 (202)
T ss_pred -CC---------------------------ceEEEEEeHHHHHHh-----------------------------------
Confidence 10 456788999999876
Q ss_pred ccccccccccccccCccCC--CccchHHHHHHHHhCCcEEEEeCCC
Q 045732 414 SCNYENRTNWGSKMGFRYG--SLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 414 ~~~ye~~t~wg~~gG~~~~--svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
||+... ...||.+.+.++..+|+++ |++..
T Consensus 137 -------------g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~ 168 (202)
T cd04185 137 -------------GLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDA 168 (202)
T ss_pred -------------CCCChhhhccchHHHHHHHHHHcCCcE-Eecce
Confidence 565432 3579999999999999999 99874
No 52
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.60 E-value=4.7e-13 Score=151.13 Aligned_cols=169 Identities=22% Similarity=0.277 Sum_probs=108.7
Q ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEecCceeccCCcchH-HHHHHHHHH-HHHHHHHhhcCCee
Q 045732 286 TNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQFPQRFRGLSSNDI-YAAEFRRLF-FVNLLGFDGLKGAT 362 (697)
Q Consensus 286 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~-~~~~~~~f~-~~~~~g~~~~~~~~ 362 (697)
...|||+.+|||+.+ +|+.+.+++.-+. || +++.|-+.-...|...+-. +-+..+.+. ..++++.++.-|.+
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~~d~----~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAMERDP----KIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHcCCC----CeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCce
Confidence 346999999999999 5999999999875 55 6777777656666543211 111112221 24556777766655
Q ss_pred e--eeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhh-hccccccccccccccccccC-cc--CCCccc
Q 045732 363 Y--VGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSL-AHHVASCNYENRTNWGSKMG-FR--YGSLTE 436 (697)
Q Consensus 363 ~--~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ye~~t~wg~~gG-~~--~~svtE 436 (697)
. -|..++||-+|+..... ...+.+ -.+++++. +.... .+ .. -..+.|
T Consensus 275 tCLPGcfsmyR~~a~~~~~~----~~~p~l----------~~~~i~~~Y~~~~~-------------dtlh~~nl~~lGE 327 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDG----YWVPLL----------ISPDIIEKYSENPV-------------DTLHQKNLLDLGE 327 (527)
T ss_pred eecCCcceeeeeehhccccc----cccccc----------cchHHHHHHhhccc-------------hHHHHHhhhhcch
Confidence 4 47777899999975200 000000 01112211 10000 01 11 124789
Q ss_pred hHHHHHHHHhC--CcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccCcchhhh
Q 045732 437 DYYTGYRLHCE--GWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIGGLQMAF 488 (697)
Q Consensus 437 D~~t~~~l~~~--Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~lqi~~ 488 (697)
|-.++-.|.++ |||..|++. +.+++.+|++++.++.||+||..|++--++
T Consensus 328 DR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 328 DRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred hHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 99988777776 899999998 558999999999999999999999985543
No 53
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.54 E-value=3.5e-14 Score=144.18 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=91.0
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHH---HHhc-CCCCCCcEEEEecCce
Q 045732 255 LIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVL---CYVS-NPVTRSNLSFVQFPQR 330 (697)
Q Consensus 255 l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v---~~f~-dp~~~~~v~~VQ~pq~ 330 (697)
+.++..++| .|+++|+|.|++.+.. .++|+++++|+|..++ |++|.+++ ..+. ++ +++.+ +|+.
T Consensus 49 i~~i~~~~n-----~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~~~----~~~~~-~~~~ 116 (237)
T cd02526 49 IELIHLGEN-----LGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSDKNS----NIGAV-GPRI 116 (237)
T ss_pred EEEEECCCc-----eehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhccCC----CeEEE-eeeE
Confidence 566666654 6699999999997310 1459999999999995 99999985 3332 33 45655 4554
Q ss_pred eccCCcchHHHHHHHH-HHHHHHHHHhh-cCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhh
Q 045732 331 FRGLSSNDIYAAEFRR-LFFVNLLGFDG-LKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSL 408 (697)
Q Consensus 331 f~n~~~~d~~~~~~~~-f~~~~~~g~~~-~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (697)
................ ........... .......|+|+++||+++.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~------------------------------ 166 (237)
T cd02526 117 IDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKV------------------------------ 166 (237)
T ss_pred EcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHh------------------------------
Confidence 3321111000000000 00000001111 122345688999999999887
Q ss_pred hccccccccccccccccccCccCCCc--cchHHHHHHHHhCCcEEEEeCCC
Q 045732 409 AHHVASCNYENRTNWGSKMGFRYGSL--TEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 409 ~~~~~~~~ye~~t~wg~~gG~~~~sv--tED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||+.... .||++.++|+..+||++.|++..
T Consensus 167 ------------------ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~ 199 (237)
T cd02526 167 ------------------GGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDA 199 (237)
T ss_pred ------------------CCCCHHHcCccchHHHHHHHHHcCCcEEEEcCe
Confidence 88986543 58999999999999999999974
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.53 E-value=2.5e-14 Score=134.89 Aligned_cols=163 Identities=31% Similarity=0.363 Sum_probs=106.1
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||+ |||+ ..+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~---------------------------- 46 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEE---------------------------- 46 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHH----------------------------
Confidence 68999 9999 68889999999999965 78999999999966221111
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
+.. . ..+
T Consensus 47 ---------------~~~----------------~------------------------------------------~~~ 53 (180)
T cd06423 47 ---------------LAA----------------L------------------------------------------YIR 53 (180)
T ss_pred ---------------Hhc----------------c------------------------------------------ccc
Confidence 000 0 001
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHH-hcCCCCCCcEEEEecCceec
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCY-VSNPVTRSNLSFVQFPQRFR 332 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~-f~dp~~~~~v~~VQ~pq~f~ 332 (697)
.+.++..++ ..+|+.|+|.+++. +++|+|+++|+|..+. |++|.+++.. +.++ ++++|.+.....
T Consensus 54 ~~~~~~~~~-----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~ 119 (180)
T cd06423 54 RVLVVRDKE-----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADP----KVGAVQGRVRVR 119 (180)
T ss_pred eEEEEEecc-----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCC----CeeeEeeeEEEe
Confidence 244555554 47899999999997 7999999999999995 9999999554 4444 577776655443
Q ss_pred cCCcchHHHHHHH-HH---HHHHHHHHhhcCC-eeeeeeeEeeehhhhcCC
Q 045732 333 GLSSNDIYAAEFR-RL---FFVNLLGFDGLKG-ATYVGTGTFFCRRALFGS 378 (697)
Q Consensus 333 n~~~~d~~~~~~~-~f---~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~i 378 (697)
+.... ....... .+ ......+...... ..+.|++.++||+++.++
T Consensus 120 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 169 (180)
T cd06423 120 NGSEN-LLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALREV 169 (180)
T ss_pred cCcCc-ceeccchheecceeeeeeehhheecceeecCchHHHHHHHHHHHh
Confidence 32211 1100000 00 0011111111222 456788899999999987
No 55
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.52 E-value=6.6e-14 Score=151.46 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=130.1
Q ss_pred CCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcc
Q 045732 89 FPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPE 168 (697)
Q Consensus 89 ~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~ 168 (697)
.|.|+|+||+ ||++ ..+.+|+.|++++.|++ ++|+|+|||++|.|.+.+.+
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~----------------------- 55 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKH----------------------- 55 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHH-----------------------
Confidence 5889999999 9999 57899999999999986 89999999999977322211
Q ss_pred cccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCC
Q 045732 169 TYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTT 248 (697)
Q Consensus 169 ~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~ 248 (697)
|.+
T Consensus 56 --------------------~~~--------------------------------------------------------- 58 (328)
T PRK10073 56 --------------------YAE--------------------------------------------------------- 58 (328)
T ss_pred --------------------HHh---------------------------------------------------------
Confidence 110
Q ss_pred CCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecC
Q 045732 249 GHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFP 328 (697)
Q Consensus 249 ~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~p 328 (697)
..|++.+++.+ +.|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++. .+++....
T Consensus 59 --~~~~i~vi~~~------n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~~--~dvv~~~~- 122 (328)
T PRK10073 59 --NYPHVRLLHQA------NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALEDD--LDVAQCNA- 122 (328)
T ss_pred --hCCCEEEEECC------CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhCC--CCEEEEcc-
Confidence 11345555532 47899999999997 8999999999999995 999999998876542 23443322
Q ss_pred ceeccC-Cc------chHHHHHHHHH--HHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCC
Q 045732 329 QRFRGL-SS------NDIYAAEFRRL--FFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEP 399 (697)
Q Consensus 329 q~f~n~-~~------~d~~~~~~~~f--~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~ 399 (697)
..+++. .. .+..... ..+ .+.+........ -....-+.++||+.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~-~~~~~~~~l~Rr~~l~~~--------------------- 179 (328)
T PRK10073 123 DWCFRDTGETWQSIPSDRLRST-GVLSGPDWLRMALSSRR-WTHVVWLGVYRRDFIVKN--------------------- 179 (328)
T ss_pred EEEEeCCCcccccccccccccc-ceechHHHHHHHHhhCC-CCccHhHHHHHHHHHHHc---------------------
Confidence 222211 10 0000000 000 000111111111 011122457899999764
Q ss_pred CCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCC
Q 045732 400 IQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 400 ~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
...|+.+...||+...+++..++.|+.|+++.
T Consensus 180 --------------------------~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ 211 (328)
T PRK10073 180 --------------------------NIKFEPGLHHQDIPWTTEVMFNALRVRYTEQS 211 (328)
T ss_pred --------------------------CCccCCCCEeccHHHHHHHHHHCCEEEEECCC
Confidence 02366666679999999999999999999875
No 56
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.50 E-value=3.2e-13 Score=135.50 Aligned_cols=138 Identities=14% Similarity=-0.002 Sum_probs=83.6
Q ss_pred EEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCC
Q 045732 256 IYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLS 335 (697)
Q Consensus 256 ~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~ 335 (697)
+++..+++ .||++|+|.|++. +.||+|+++|+|...+ |+.+.+++..+.++. ..+|.+........
T Consensus 60 ~~i~~~~n-----~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~r~~~~~~ 125 (211)
T cd04188 60 RVLTLPKN-----RGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG----YDIAIGSRAHLASA 125 (211)
T ss_pred EEEEcccC-----CCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC----CcEEEEEeeccCCc
Confidence 45555543 6799999999997 7899999999999995 999999999865542 33444443332211
Q ss_pred --cc-hHHHHHHHHHHHHHHHHHhhcCCeeeeeee-EeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcc
Q 045732 336 --SN-DIYAAEFRRLFFVNLLGFDGLKGATYVGTG-TFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHH 411 (697)
Q Consensus 336 --~~-d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg-~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (697)
.. ..........+........+... .-..+| .++||+++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~g~~~~~r~~~~~~--------------------------------- 171 (211)
T cd04188 126 AVVKRSWLRNLLGRGFNFLVRLLLGLGI-KDTQCGFKLFTRDAARRL--------------------------------- 171 (211)
T ss_pred ccccccHHHHHHHHHHHHHHHHHcCCCC-cccccCceeEcHHHHHHH---------------------------------
Confidence 10 11111111111112222222211 112333 57899999764
Q ss_pred ccccccccccccccccC-ccCCCccchHHHHHHHHhCCcEEEEeCC
Q 045732 412 VASCNYENRTNWGSKMG-FRYGSLTEDYYTGYRLHCEGWRSIYCTP 456 (697)
Q Consensus 412 ~~~~~ye~~t~wg~~gG-~~~~svtED~~t~~~l~~~Gwrsvy~~~ 456 (697)
++ .......+|+++.+++...||++.++|-
T Consensus 172 ---------------~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi 202 (211)
T cd04188 172 ---------------FPRLHLERWAFDVELLVLARRLGYPIEEVPV 202 (211)
T ss_pred ---------------HhhhhccceEeeHHHHHHHHHcCCeEEEcCc
Confidence 11 1112335799999999999999999873
No 57
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.47 E-value=1.7e-12 Score=135.15 Aligned_cols=190 Identities=15% Similarity=0.065 Sum_probs=119.8
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCC-CCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFD-YPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPE 168 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~d-YP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~ 168 (697)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+|||++|.|.+.+.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~----------------------- 53 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLEN----------------------- 53 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHH-----------------------
Confidence 679999999 9998 57789999998642 2333589999999999987422222
Q ss_pred cccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCC
Q 045732 169 TYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTT 248 (697)
Q Consensus 169 ~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~ 248 (697)
|.+ +
T Consensus 54 --------------------~~~--------------------------------------~------------------ 57 (248)
T PRK10063 54 --------------------LNG--------------------------------------I------------------ 57 (248)
T ss_pred --------------------hcc--------------------------------------c------------------
Confidence 100 0
Q ss_pred CCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecC
Q 045732 249 GHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFP 328 (697)
Q Consensus 249 ~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~p 328 (697)
.++.+++. + ..|+++|+|.|++. ++||+|+++|+|.... |+.++........+ +...++ +.
T Consensus 58 ----~~i~~i~~-~-----~~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~~-~~~~~~~~~~~~~~---~~~~v~-g~ 118 (248)
T PRK10063 58 ----FNLRFVSE-P-----DNGIYDAMNKGIAM----AQGRFALFLNSGDIFH-QDAANFVRQLKMQK---DNAMII-GD 118 (248)
T ss_pred ----CCEEEEEC-C-----CCCHHHHHHHHHHH----cCCCEEEEEeCCcccC-cCHHHHHHHHHhCC---CCeEEE-ee
Confidence 01445542 2 35899999999997 8999999999999984 88765433333222 123333 22
Q ss_pred ceeccCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhh
Q 045732 329 QRFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSL 408 (697)
Q Consensus 329 q~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (697)
......+.. ....... ...........++.+.+++|+.+..
T Consensus 119 ~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 159 (248)
T PRK10063 119 ALLDFGDGH-KIKRSAK-------PGWYIYHSLPASHQAIFFPVSGLKK------------------------------- 159 (248)
T ss_pred eEEEcCCCc-EEEEccC-------ChhHHhcCCCCCCcEEEEEHHHHhc-------------------------------
Confidence 221111110 0000000 0000011222456677889988753
Q ss_pred hccccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCCC
Q 045732 409 AHHVASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPDR 458 (697)
Q Consensus 409 ~~~~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~~ 458 (697)
+||+.. ...||++..+++..+|++..+++...
T Consensus 160 ------------------~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l 192 (248)
T PRK10063 160 ------------------WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLV 192 (248)
T ss_pred ------------------CCCCcccchHHhHHHHHHHHHcCCcEEEcCcee
Confidence 567644 46799999999999999999998754
No 58
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.47 E-value=1.4e-12 Score=138.12 Aligned_cols=110 Identities=16% Similarity=0.234 Sum_probs=86.3
Q ss_pred CCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCc
Q 045732 88 EFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNP 167 (697)
Q Consensus 88 ~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p 167 (697)
+.|.|+|+||| |||+. .+.+||.|+++++||+ ++|+|+|||+++. +.+
T Consensus 3 ~~p~VSVIip~---yN~~~-~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~~--~~~------------------------ 50 (279)
T PRK10018 3 DNPLISIYMPT---WNRQQ-LAIRAIKSVLRQDYSN--WEMIIVDDCSTSW--EQL------------------------ 50 (279)
T ss_pred CCCEEEEEEEe---CCCHH-HHHHHHHHHHhCCCCC--eEEEEEECCCCCH--HHH------------------------
Confidence 46899999999 99996 5579999999999996 8999999999842 111
Q ss_pred ccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCC
Q 045732 168 ETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDT 247 (697)
Q Consensus 168 ~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~ 247 (697)
++. .+++
T Consensus 51 ---------------~~~---~~~~------------------------------------------------------- 57 (279)
T PRK10018 51 ---------------QQY---VTAL------------------------------------------------------- 57 (279)
T ss_pred ---------------HHH---HHHc-------------------------------------------------------
Confidence 110 0000
Q ss_pred CCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC
Q 045732 248 TGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 248 ~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d 315 (697)
..|++.|+..++ +.|++.|+|.|++. ++||||+++|+|.... |+.|.+++.++..
T Consensus 58 ---~~~ri~~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~~ 112 (279)
T PRK10018 58 ---NDPRITYIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQQ 112 (279)
T ss_pred ---CCCCEEEEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHHh
Confidence 013477777665 47899999999997 8999999999999996 9999999887754
No 59
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.43 E-value=1e-12 Score=127.89 Aligned_cols=165 Identities=19% Similarity=0.155 Sum_probs=108.7
Q ss_pred EEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccccccc
Q 045732 94 VFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFSL 173 (697)
Q Consensus 94 V~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~~ 173 (697)
|+||+ |||+ ..+.+|+.++..+.|+....+|+|+|||+++.|.+.+.+
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~---------------------------- 48 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARE---------------------------- 48 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHH----------------------------
Confidence 67999 9998 577899999999999655689999999999866322222
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCcC
Q 045732 174 NHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFLP 253 (697)
Q Consensus 174 ~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~p 253 (697)
+.+ ..|
T Consensus 49 ---------------~~~-----------------------------------------------------------~~~ 54 (185)
T cd04179 49 ---------------LAA-----------------------------------------------------------RVP 54 (185)
T ss_pred ---------------HHH-----------------------------------------------------------hCC
Confidence 100 012
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
.++++..+++ .||++|+|.+++. +.||+++++|+|..+. |+.|.+++..+.++ +.++|.++....+
T Consensus 55 ~~~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~~~~~~ 120 (185)
T cd04179 55 RVRVIRLSRN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEG----GADVVIGSRFVRG 120 (185)
T ss_pred CeEEEEccCC-----CCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc----CCcEEEEEeecCC
Confidence 2455555553 6799999999997 7899999999999995 99999999986544 3566666665544
Q ss_pred CCc-chHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCC
Q 045732 334 LSS-NDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGS 378 (697)
Q Consensus 334 ~~~-~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i 378 (697)
... ...+.......+................|...++||+++.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 166 (185)
T cd04179 121 GGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEAL 166 (185)
T ss_pred CcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHH
Confidence 221 111111111111111122222223334566668999999876
No 60
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.42 E-value=9.7e-14 Score=130.87 Aligned_cols=166 Identities=19% Similarity=0.131 Sum_probs=107.9
Q ss_pred eEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcccccc
Q 045732 93 DVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPETYFS 172 (697)
Q Consensus 93 dV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~yf~ 172 (697)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~--------------------------- 47 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEE--------------------------- 47 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHH---------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEecccccccccccccc---------------------------
Confidence 689999 9996 67889999999995554 78999999999866222222
Q ss_pred cccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCCCCc
Q 045732 173 LNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTGHFL 252 (697)
Q Consensus 173 ~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~ 252 (697)
+.+ ..
T Consensus 48 ----------------~~~-----------------------------------------------------------~~ 52 (169)
T PF00535_consen 48 ----------------YAE-----------------------------------------------------------SD 52 (169)
T ss_dssp ----------------HHC-----------------------------------------------------------CS
T ss_pred ----------------ccc-----------------------------------------------------------cc
Confidence 100 01
Q ss_pred CeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceec
Q 045732 253 PNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFR 332 (697)
Q Consensus 253 p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~ 332 (697)
+++.|+.++++ .++++|+|.|++. +++||++++|+|.++. |++|.+++..+.+.. ..+.+........
T Consensus 53 ~~i~~i~~~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~ 120 (169)
T PF00535_consen 53 PNIRYIRNPEN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDD 120 (169)
T ss_dssp TTEEEEEHCCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEEC
T ss_pred ccccccccccc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecC
Confidence 24788888874 5899999999998 8999999999999996 999999999998742 2333332222222
Q ss_pred cCCcchHHHH--HHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCC
Q 045732 333 GLSSNDIYAA--EFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGS 378 (697)
Q Consensus 333 n~~~~d~~~~--~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i 378 (697)
+......... .....+..............++|+++++||++++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ 168 (169)
T PF00535_consen 121 DNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI 168 (169)
T ss_dssp TTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred CccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence 2111000000 000111222334445667889999999999999753
No 61
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.41 E-value=3.8e-11 Score=130.33 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=85.4
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcC------CCCCCceEEEEecCCCCchhhHhHHHHHHhhhhcccccccc
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAF------DYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKN 160 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~------dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~ 160 (697)
...|.|+|+||+ |||+. .+.+++.++.+. ++|...++|+|+||||+|.|.+.+.+
T Consensus 67 ~~~~~isVVIP~---yNe~~-~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~--------------- 127 (333)
T PTZ00260 67 DSDVDLSIVIPA---YNEED-RLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKD--------------- 127 (333)
T ss_pred CCCeEEEEEEee---CCCHH-HHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHH---------------
Confidence 457899999999 99996 567888887653 24555689999999999988432222
Q ss_pred CcccCCcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeec
Q 045732 161 NVLETNPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLID 240 (697)
Q Consensus 161 ~v~~~~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~ 240 (697)
|.+ + . +.
T Consensus 128 ----------------------------~~~---~--------------------------~-----~~----------- 134 (333)
T PTZ00260 128 ----------------------------FWR---Q--------------------------N-----IN----------- 134 (333)
T ss_pred ----------------------------HHH---h--------------------------c-----CC-----------
Confidence 100 0 0 00
Q ss_pred CCCCCCCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC
Q 045732 241 NGKDEDTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 241 ~~~~~~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d 315 (697)
..+.+.++..++ +.||++|+|.|++. +.||+|+++|||... +|+.+.+++..+.+
T Consensus 135 ----------~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 135 ----------PNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLK 189 (333)
T ss_pred ----------CCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHH
Confidence 001255555554 37899999999997 789999999999998 59999999887764
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.37 E-value=6.7e-12 Score=132.02 Aligned_cols=145 Identities=16% Similarity=0.012 Sum_probs=95.6
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
++.|+..++| .|.|+|+|.|++.+- ..++|+|+++|.|.+++ +++|.+++..+.++ +.++++|+ |..+..
T Consensus 46 ~i~~i~~~~N-----~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~~ 115 (281)
T TIGR01556 46 KIALIHLGDN-----QGIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFDR 115 (281)
T ss_pred CeEEEECCCC-----cchHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEcC
Confidence 4677776654 689999999999731 12789999999999995 99999999988643 12577774 443332
Q ss_pred CCcchHHHH--HHHHHHHHH-HHHHhh-cCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhh
Q 045732 334 LSSNDIYAA--EFRRLFFVN-LLGFDG-LKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLA 409 (697)
Q Consensus 334 ~~~~d~~~~--~~~~f~~~~-~~g~~~-~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (697)
. ....++. ......... ...... ....+..++|+++||+++.++
T Consensus 116 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~i------------------------------- 163 (281)
T TIGR01556 116 G-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQRL------------------------------- 163 (281)
T ss_pred C-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHHh-------------------------------
Confidence 1 1111110 000000000 000001 122355788999999999887
Q ss_pred ccccccccccccccccccCccCCC--ccchHHHHHHHHhCCcEEEEeCCC
Q 045732 410 HHVASCNYENRTNWGSKMGFRYGS--LTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 410 ~~~~~~~ye~~t~wg~~gG~~~~s--vtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||+++- =.||.+.++|+..+||++.++++.
T Consensus 164 -----------------G~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~ 196 (281)
T TIGR01556 164 -----------------GMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDI 196 (281)
T ss_pred -----------------CCccHhhcccchHHHHHHHHHHCCCEEEEeCCE
Confidence 7877642 258999999999999999999974
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.30 E-value=2.4e-11 Score=118.74 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=65.3
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
++.++..++ +.||++|+|.+++. +.+|+|+++|+|..+. |+.|.+++..+.+. .++.. +.....+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~---~~~v~--g~~~~~~ 120 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKWEEG---YDVVY--GVRKNRK 120 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHHhCC---CcEEE--EEecCCc
Confidence 355655554 36799999999997 7899999999999995 99999999875432 13322 2221121
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCC
Q 045732 334 LSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGS 378 (697)
Q Consensus 334 ~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i 378 (697)
+ ..........+........+..-+...|+..++||+++.++
T Consensus 121 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 162 (181)
T cd04187 121 -E--SWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDAL 162 (181)
T ss_pred -c--hHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHHH
Confidence 1 11111111111112222223333445677788999999887
No 64
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.23 E-value=2.9e-10 Score=121.65 Aligned_cols=210 Identities=20% Similarity=0.189 Sum_probs=139.4
Q ss_pred CCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCcc
Q 045732 89 FPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPE 168 (697)
Q Consensus 89 ~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~ 168 (697)
-|.+.++|+| ||-.. .+.+++.++.+++||.+. ++++|+|++|.|.+.+++.
T Consensus 2 ~~~i~~iiv~---yn~~~-~l~~~l~~l~~~~~~~~~--iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRGE-DLVECLASLAAQTYPDDV--IVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCHH-HHHHHHHHHhcCCCCCcE--EEEccCCCCCCCHHHHHhh----------------------
Confidence 4789999999 99995 567999999999999853 5589999999763222220
Q ss_pred cccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCC
Q 045732 169 TYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTT 248 (697)
Q Consensus 169 ~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~ 248 (697)
T Consensus 54 -------------------------------------------------------------------------------- 53 (305)
T COG1216 54 -------------------------------------------------------------------------------- 53 (305)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCC-EEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEec
Q 045732 249 GHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAP-IILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQF 327 (697)
Q Consensus 249 ~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge-~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~ 327 (697)
..|++.++.-.+| .|=||+.|.+++.+. ++++ ++++++-|+++ +|++|.+++..+.+.. ..+.|+.
T Consensus 54 --~~~~v~~i~~~~N-----lG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~~~---~~~~~~~ 120 (305)
T COG1216 54 --FFPNVRLIENGEN-----LGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV-EPDLLEELLKAAEEDP---AAGVVGP 120 (305)
T ss_pred --cCCcEEEEEcCCC-----ccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-ChhHHHHHHHHHHhCC---CCeEeee
Confidence 0234666666664 678999999999742 4444 89999999998 5999999999887532 5666654
Q ss_pred CceeccCCc-chHHHHHHHHHHHHHHH--HHhhcC--------CeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCC
Q 045732 328 PQRFRGLSS-NDIYAAEFRRLFFVNLL--GFDGLK--------GATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAV 396 (697)
Q Consensus 328 pq~f~n~~~-~d~~~~~~~~f~~~~~~--g~~~~~--------~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~ 396 (697)
....++... .+..+.....+...... ..+... -+.++|.++++||+++..+
T Consensus 121 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~li~~~~~~~v------------------ 182 (305)
T COG1216 121 LIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVASLSGACLLIRREAFEKV------------------ 182 (305)
T ss_pred eEecCCCCcchheeccccccccccceecccccccccccchhhhhhhcceeeeEEcHHHHHHh------------------
Confidence 443332111 01111000000000000 000000 0146788899999999987
Q ss_pred CCCCCchhHHhhhccccccccccccccccccCccCC--CccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCC
Q 045732 397 DEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYG--SLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPIT 468 (697)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~--svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~t 468 (697)
|||+.+ .-.||++.+.|+..+||++.|++.. ...+-...++
T Consensus 183 ------------------------------G~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a-~i~H~~g~s~ 225 (305)
T COG1216 183 ------------------------------GGFDERFFIYYEDVDLCLRARKAGYKIYYVPDA-IIYHKIGSSK 225 (305)
T ss_pred ------------------------------CCCCcccceeehHHHHHHHHHHcCCeEEEeecc-EEEEeccCCC
Confidence 887764 4589999999999999999999985 3445444444
No 65
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.22 E-value=3.4e-10 Score=119.86 Aligned_cols=132 Identities=17% Similarity=0.203 Sum_probs=88.3
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHH---hcCCCCCCcEEEEecCceeccCCcchHHHHHH-
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCY---VSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEF- 344 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~---f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~- 344 (697)
-++|.|.|.|++. +++|+|+++|+|.++. |+++.+++.+ +... .-+++-.|..+.+........+..
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~----~~~~~~~p~~yl~~~~~~~~~~~~~ 144 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKN----PNAFLVYPCLYLSEEGSEKFYSQFK 144 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcC----CCceEEEeeeeccchhhHHHhhcch
Confidence 4899999999997 8999999999999995 9999999983 3221 234455566555533222221111
Q ss_pred ----HHHHHHHHHH-HhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccc
Q 045732 345 ----RRLFFVNLLG-FDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYEN 419 (697)
Q Consensus 345 ----~~f~~~~~~g-~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~ 419 (697)
..+.+....+ ...++.....|++.+++|+.+.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~i----------------------------------------- 183 (281)
T PF10111_consen 145 NLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEI----------------------------------------- 183 (281)
T ss_pred hcchHHHHHHHhhccccccccccccceEEEEEHHHHHHh-----------------------------------------
Confidence 0111111111 122222334566667899999887
Q ss_pred ccccccccCccCCC---ccchHHHHHHHHhCCcEEEEeCCC
Q 045732 420 RTNWGSKMGFRYGS---LTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 420 ~t~wg~~gG~~~~s---vtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||++.= -.||++.+.||...|.+..++++.
T Consensus 184 -------GGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~ 217 (281)
T PF10111_consen 184 -------GGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDY 217 (281)
T ss_pred -------CCCCccccCCCcchHHHHHHHHHcCCcEecChHH
Confidence 8988652 479999999999999999877753
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.21 E-value=3.6e-10 Score=103.90 Aligned_cols=91 Identities=29% Similarity=0.222 Sum_probs=71.9
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHH-hcCCCCCCcEEEEecCceeccCCcchHHHHHHHH
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCY-VSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRR 346 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~-f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~ 346 (697)
+.+|++++|.+++. .++|+++++|+|.++. |+++..++.. ..++ +.++|+++
T Consensus 62 ~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~----~~~~v~~~------------------ 114 (156)
T cd00761 62 NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADP----EADAVGGP------------------ 114 (156)
T ss_pred CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCC----CceEEecc------------------
Confidence 57899999999997 6899999999999995 9999987444 4443 46777654
Q ss_pred HHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccc
Q 045732 347 LFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSK 426 (697)
Q Consensus 347 f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~ 426 (697)
++.+++++.+..+
T Consensus 115 -------------------~~~~~~~~~~~~~------------------------------------------------ 127 (156)
T cd00761 115 -------------------GNLLFRRELLEEI------------------------------------------------ 127 (156)
T ss_pred -------------------chheeeHHHHHHh------------------------------------------------
Confidence 5677899999876
Q ss_pred cCccCCCc--cchHHHHHHHHhCCcEEE
Q 045732 427 MGFRYGSL--TEDYYTGYRLHCEGWRSI 452 (697)
Q Consensus 427 gG~~~~sv--tED~~t~~~l~~~Gwrsv 452 (697)
||+..... .||..+..+++..|++++
T Consensus 128 ~~~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 128 GGFDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred CCcchHhcCCcchHHHHHHHHhhccccc
Confidence 55544332 599999999999998764
No 67
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.18 E-value=1.9e-09 Score=116.69 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d 315 (697)
+.||++|+|.|++. ++||+++++|||...+ |+.+.+++..+.+
T Consensus 75 n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~~ 117 (325)
T PRK10714 75 NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKADE 117 (325)
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHHh
Confidence 47899999999997 8999999999999985 9999999988753
No 68
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.17 E-value=3.4e-10 Score=121.49 Aligned_cols=51 Identities=25% Similarity=0.242 Sum_probs=43.6
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCC-CCCCcHHHHHHHHhc-CCCCCCcEEEEec
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTS-SNDPQTPLRVLCYVS-NPVTRSNLSFVQF 327 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~-~~~p~~L~~~v~~f~-dp~~~~~v~~VQ~ 327 (697)
+.||++|+|.++.. ++||+|+++|||.. + +|+++.+++..+. ++ ++++|.+
T Consensus 100 n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~-~p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 100 RPGKGEALWRSLAA----TTGDIVVFVDADLINF-DPMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred CCCHHHHHHHHHHh----cCCCEEEEEeCccccC-CHHHHHHHHHHHHhCC----CceEEEE
Confidence 47899999999997 88999999999997 6 5999999999886 66 4667764
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.16 E-value=1.2e-09 Score=127.74 Aligned_cols=168 Identities=20% Similarity=0.257 Sum_probs=112.7
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEecCceeccCCcch--HHHHHHH
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQFPQRFRGLSSND--IYAAEFR 345 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d--~~~~~~~ 345 (697)
+.|-=.+|.+....+ .+-++|+.+|+|+.+ +|+++.+++.-|. ||+ ||.+-+ +..|..... .+++-..
T Consensus 424 ~~~r~~~y~~~~~L~--~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp~----VggaCG--~I~~~~~~w~v~~Q~FEY 494 (862)
T KOG2571|consen 424 NQHRWVMYTAFKALM--PSVDYILVVDADTRL-DPDALYHLVKVFDEDPQ----VGGACG--RILNKGGSWVVAYQNFEY 494 (862)
T ss_pred HHHHHHHHHHHHHhc--CcceEEEEecCCCcc-CcHHHHHHHHHhccCcc----cceecc--ccccCCCceEEeHHHHHH
Confidence 445556666666643 566799999999999 5999999999997 774 555555 233322111 1111111
Q ss_pred HHHHHHHHHHhhcCCeeeeeeeE--eeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccccccc
Q 045732 346 RLFFVNLLGFDGLKGATYVGTGT--FFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNW 423 (697)
Q Consensus 346 ~f~~~~~~g~~~~~~~~~~Gtg~--~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~w 423 (697)
..-..+++..+..-|-+.|-+|| +||-+||.+-.. + .+..++.-
T Consensus 495 ~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~--------~--------------------------~~y~~~~~ 540 (862)
T KOG2571|consen 495 AISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV--------E--------------------------YFYGEKFS 540 (862)
T ss_pred HHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH--------H--------------------------hhhchhhc
Confidence 12234567777776766665555 689999965300 0 00111111
Q ss_pred ccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHccC
Q 045732 424 GSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 424 g~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 482 (697)
|..-|..+ +..||-.+..++..+||+.-|+.. +.+.+++|+++.+++.||+||..|
T Consensus 541 ~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 541 GPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred Cccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 11113333 489999999999999999999997 558899999999999999999999
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.73 E-value=7.6e-08 Score=98.50 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=39.3
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCC
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNP 316 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp 316 (697)
..+++.+.|.|+.. +.+|+|+++|||..+. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 36799999999997 7899999999999995 99999999988754
No 71
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.73 E-value=7.3e-08 Score=90.92 Aligned_cols=46 Identities=26% Similarity=0.418 Sum_probs=42.3
Q ss_pred CCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhh
Q 045732 89 FPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATL 140 (697)
Q Consensus 89 ~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~ 140 (697)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~ 47 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTT 47 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChH
Confidence 5889999999 9999 68899999999999998 679999999999873
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.67 E-value=6.3e-08 Score=103.19 Aligned_cols=152 Identities=23% Similarity=0.282 Sum_probs=108.5
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEE-ecCceeccCCcchHHHHHHHHH
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFV-QFPQRFRGLSSNDIYAAEFRRL 347 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~V-Q~pq~f~n~~~~d~~~~~~~~f 347 (697)
.-|-.|+=-|.+. +..|+|++.|.|-.+ +||.+..+..-|..++ ++|+| |+|-.+. ....| ..-++ ++
T Consensus 156 npKInN~mpgy~~----a~ydlvlisDsgI~m-~pdtildm~t~M~she---kmalvtq~py~~d-r~Gf~-atle~-~~ 224 (431)
T KOG2547|consen 156 NPKINNMMPGYRA----AKYDLVLISDSGIFM-KPDTILDMATTMMSHE---KMALVTQTPYCKD-RQGFD-ATLEQ-VY 224 (431)
T ss_pred ChhhhccCHHHHH----hcCCEEEEecCCeee-cCchHHHHHHhhhccc---ceeeecCCceeec-cccch-hhhhh-ee
Confidence 5588888888987 899999999999999 5999999998888664 79999 5554333 22221 11111 33
Q ss_pred HHHHHHH----HhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccccccc
Q 045732 348 FFVNLLG----FDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNW 423 (697)
Q Consensus 348 ~~~~~~g----~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~w 423 (697)
|+.-+.. -+-.+-.+.+|-.++.|+++|++.
T Consensus 225 fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld~~--------------------------------------------- 259 (431)
T KOG2547|consen 225 FGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALDEC--------------------------------------------- 259 (431)
T ss_pred eccCCceEEEccccccccccccHHHHHHHHHHHHh---------------------------------------------
Confidence 3322211 011111234566678899999876
Q ss_pred ccccCcc--CCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHHHHcc
Q 045732 424 GSKMGFR--YGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYKRWAI 481 (697)
Q Consensus 424 g~~gG~~--~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 481 (697)
||+. .+.+.||+..+-.+..+||++.+... ++-...+-.+...+..|-.||..
T Consensus 260 ---ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 260 ---GGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 7754 35789999999999999999999886 44566777888999999999984
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.61 E-value=6.5e-07 Score=87.58 Aligned_cols=107 Identities=14% Similarity=0.066 Sum_probs=68.0
Q ss_pred eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceecc
Q 045732 254 NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRG 333 (697)
Q Consensus 254 ~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n 333 (697)
++....|.+ .-|-..|--+++.+ +.|+|++++|||--- +|.++-+.+..-.+- +..+|-+-. |..
T Consensus 64 ~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDlsH-hPk~ipe~i~lq~~~----~~div~GTR-Ya~ 128 (238)
T KOG2978|consen 64 NILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLSH-HPKFIPEFIRLQKEG----NYDIVLGTR-YAG 128 (238)
T ss_pred cEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccCC-CchhHHHHHHHhhcc----Ccceeeeee-EcC
Confidence 466777776 35677888899998 899999999999997 599999988866653 456775533 322
Q ss_pred CCcchHHH------HHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCC
Q 045732 334 LSSNDIYA------AEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGS 378 (697)
Q Consensus 334 ~~~~d~~~------~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i 378 (697)
...-+.+. +....| +.+-.-+.+..-..|+.-++|++.|...
T Consensus 129 ~ggV~gW~mkRk~IS~gAn~---la~~ll~~~~sdltGsFrLykk~vl~~l 176 (238)
T KOG2978|consen 129 GGGVYGWDMKRKIISRGANF---LARILLNPGVSDLTGSFRLYKKEVLEKL 176 (238)
T ss_pred CCceecchhhHHHHhhhhHH---HHHHhccCCCccCcceeeeehHHHHHhh
Confidence 11101111 111111 1111222344456889999999999654
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=97.75 E-value=0.00021 Score=74.54 Aligned_cols=45 Identities=22% Similarity=0.201 Sum_probs=33.5
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCC--CCCCcHHHHHHHHhcCC
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTS--SNDPQTPLRVLCYVSNP 316 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~--~~~p~~L~~~v~~f~dp 316 (697)
+.+|.||...++-+ +.|+++++.|||-- .+|=+.|.+++.--..|
T Consensus 142 nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p 188 (323)
T KOG2977|consen 142 NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKAGP 188 (323)
T ss_pred cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhcCC
Confidence 47799999988886 89999999999953 33456677776644433
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.74 E-value=0.00037 Score=75.75 Aligned_cols=43 Identities=23% Similarity=0.412 Sum_probs=36.5
Q ss_pred eeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCch
Q 045732 92 LDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAA 138 (697)
Q Consensus 92 VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~ 138 (697)
+-|+|.+ ||-| +.+.+||.+++++.+-.+..+++|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 4588999 9998 68899999999987445678899999999874
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.00065 Score=73.31 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=41.5
Q ss_pred CCCCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCc
Q 045732 84 MKPSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCA 137 (697)
Q Consensus 84 ~~~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~ 137 (697)
+-++++|+++|+|.- +||.-..+++||.|.+.-.=|+-.-+|+++||-++.
T Consensus 149 dYpe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 149 DYPENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred CCcccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 345789999999999 999999999999999876644444568888886653
No 77
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.66 E-value=0.00096 Score=76.79 Aligned_cols=48 Identities=19% Similarity=0.136 Sum_probs=42.1
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCc
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCA 137 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~ 137 (697)
..+|+++|+|+- +||...+..+||.|+.+..=|.-.-+|+|+||+++.
T Consensus 139 ~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 139 DKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 459999999999 999999999999998887755556689999999886
No 78
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=95.59 E-value=0.14 Score=61.09 Aligned_cols=177 Identities=15% Similarity=0.101 Sum_probs=105.1
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCC--CCCCCCCcH--HHHHHHHhcCCCC--------------CCcEEEEecCc
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDC--DTSSNDPQT--PLRVLCYVSNPVT--------------RSNLSFVQFPQ 329 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDA--D~~~~~p~~--L~~~v~~f~dp~~--------------~~~v~~VQ~pq 329 (697)
..||.-|.|+|+=. +.||++-.+|+ |.+.. ++ ++.++.=|.+... .+.+++|-.+.
T Consensus 273 GeGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYle--E~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE 346 (817)
T PF02364_consen 273 GEGKPENQNHAIIF----TRGEYLQTIDMNQDNYLE--EALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFRE 346 (817)
T ss_pred CCCCccccceeEEE----EccccccccccchhhhHH--HHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccc
Confidence 47899999999976 89999999999 44542 22 2334444543211 34678887776
Q ss_pred eeccCCc---chHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHH
Q 045732 330 RFRGLSS---NDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSIL 406 (697)
Q Consensus 330 ~f~n~~~---~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (697)
+....+. .+..+.+...|=-..|+-+...++-+.-|.=-++.|--...
T Consensus 347 ~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~T----------------------------- 397 (817)
T PF02364_consen 347 HIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTT----------------------------- 397 (817)
T ss_pred eEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheec-----------------------------
Confidence 5553322 13333343343333444444333333333333333322211
Q ss_pred hhhccccccccccccccccccCccC----CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecC-CCHHHHHHHHHHHcc
Q 045732 407 SLAHHVASCNYENRTNWGSKMGFRY----GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAP-ITLFDFINQYKRWAI 481 (697)
Q Consensus 407 ~~~~~~~~~~ye~~t~wg~~gG~~~----~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP-~tl~~~l~Qr~RWa~ 481 (697)
.||... -.++||+..|+...+||-|+.+++-- ..|-.= -.+.+-..=-.+-+.
T Consensus 398 -------------------RGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~---qcGKGRD~Gf~~I~~F~~KI~~ 455 (817)
T PF02364_consen 398 -------------------RGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYI---QCGKGRDVGFNSILNFETKIAS 455 (817)
T ss_pred -------------------cCccchHhhcccccHHHHHHHHHHhcCCceeehhhh---hcccccccCchhhhhhHhHhcC
Confidence 156542 36899999999999999999998752 233322 334455555678899
Q ss_pred CcchhhhhccCcccccCCCchH
Q 045732 482 GGLQMAFARYSPFTVGTKTIGL 503 (697)
Q Consensus 482 G~lqi~~~~~~Pl~~~~~~l~~ 503 (697)
|+=|..++|.--.+ | .++.+
T Consensus 456 G~GEQ~LSRe~yrL-g-~~ld~ 475 (817)
T PF02364_consen 456 GMGEQMLSREYYRL-G-TRLDF 475 (817)
T ss_pred CccchhhhHHHHHh-h-ccCCH
Confidence 99999888753222 2 56676
No 79
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.58 E-value=0.046 Score=59.75 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=44.0
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCch
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAA 138 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~ 138 (697)
.++|+-+|+|+- +||....+-+||.|+++..=++=-.+|+++||++.|.
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 469999999999 9999999999999999987655567899999999984
No 80
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=94.67 E-value=0.14 Score=44.96 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=27.1
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhh
Q 045732 102 YKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATL 140 (697)
Q Consensus 102 ~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~ 140 (697)
.||+. .+...|..-+++.+-+ +||.|||++|.|.
T Consensus 1 rne~~-~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~ 34 (97)
T PF13704_consen 1 RNEAD-YLPEWLAHHLALGVDH----IYIYDDGSTDGTR 34 (97)
T ss_pred CChHH-HHHHHHHHHHHcCCCE----EEEEECCCCccHH
Confidence 47884 6778898888887653 9999999999873
No 81
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=90.57 E-value=3.8 Score=44.70 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=33.3
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS 314 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 314 (697)
+.||+-+|=-++-.+. ....+||-++|||.++ |.++.+-+.-|.
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA 184 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA 184 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH
Confidence 5788888777665432 2578999999999998 688888666554
No 82
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=90.29 E-value=0.62 Score=47.79 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=39.2
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh-cCCCCCCcEEEE
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV-SNPVTRSNLSFV 325 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~dp~~~~~v~~V 325 (697)
...-+.+.|.|++. ++++|++++.=|..+.+++++.+++..| .|| ++|.+
T Consensus 39 ~~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 39 AKSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp -S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred CcCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 46688999999997 8999999999999998899999999999 787 46555
No 83
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=89.26 E-value=1.1 Score=46.03 Aligned_cols=141 Identities=18% Similarity=0.093 Sum_probs=82.5
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHH
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRL 347 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f 347 (697)
.--||..||.|...+....+.+++++-|.|.+|. .+.+... + + +.|..+.-.- +.+ ....
T Consensus 47 ~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~-~~~~~y~--~--~----------~~p~H~s~~~--~~~--~~~l- 106 (219)
T cd00899 47 RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPE-NDRNLYG--C--E----------EGPRHLSVPL--DKF--HYKL- 106 (219)
T ss_pred cchhhhhhhHHHHHHhhcCCccEEEEeccccccc-Ccccccc--C--C----------CCCeEEEEee--ccc--cccc-
Confidence 4669999999776543234579999999999996 5554311 1 1 1222221100 000 0000
Q ss_pred HHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccccccccccc
Q 045732 348 FFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM 427 (697)
Q Consensus 348 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g 427 (697)
.-.-+.|.+..++|+.+..+ +
T Consensus 107 -----------py~~~~Gg~~~~~k~~f~~V------------------------------------------------N 127 (219)
T cd00899 107 -----------PYKTYFGGVLALTREQFRKV------------------------------------------------N 127 (219)
T ss_pred -----------CcccccccceeeEHHHHHHh------------------------------------------------C
Confidence 00123555778899999877 3
Q ss_pred CccCC---CccchHHHHHHHHhCCcEEEEeCCCCC----ce------eeecCCCHHHHHHHHHHHccCcchhh
Q 045732 428 GFRYG---SLTEDYYTGYRLHCEGWRSIYCTPDRP----AF------YGDAPITLFDFINQYKRWAIGGLQMA 487 (697)
Q Consensus 428 G~~~~---svtED~~t~~~l~~~Gwrsvy~~~~~~----~~------~g~aP~tl~~~l~Qr~RWa~G~lqi~ 487 (697)
||+.+ -=.||-+.+.||...|.+.......-. .- ....|.-+.....++.||+...+.-+
T Consensus 128 Gf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 128 GFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred CcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 44331 125999999999999998766554211 00 12234445556678888888877654
No 84
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=89.17 E-value=4 Score=44.75 Aligned_cols=102 Identities=10% Similarity=0.014 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccC-----C-------
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGL-----S------- 335 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~-----~------- 335 (697)
+.||+-+|=-++-.+. ....+||-++|||.++ |.++.+-+.-|.- ..+.-++|.....+ +
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yAA-----Gf~ma~spytMVRi~W~~KPKv~~~~l 213 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYAA-----GFLMAESPYTMVRIHWRYKPKVTEDRL 213 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHHh-----hhcccCCCCceEEEEecCCCceecCeE
Confidence 5788888777665432 3578999999999998 6888887665542 13333444222111 0
Q ss_pred ---cchHHHH-HHHHHHHHHHHHHhhcCCee-eeeeeEe--eehhhhcCC
Q 045732 336 ---SNDIYAA-EFRRLFFVNLLGFDGLKGAT-YVGTGTF--FCRRALFGS 378 (697)
Q Consensus 336 ---~~d~~~~-~~~~f~~~~~~g~~~~~~~~-~~Gtg~~--~RR~aL~~i 378 (697)
+..+... -++ +.........+...++ -+|.+.= .+|+.+..+
T Consensus 214 yF~k~GRvSel~nr-~LN~l~~~~~gf~t~li~TGNAGEhAmt~~La~~l 262 (393)
T PRK14503 214 YFRKWGRVSEITNR-YLNQLISEYTGFETDIIKTGNAGEHAMTMKLAEIM 262 (393)
T ss_pred EEecCcchhHHHHH-HHHHHHhhhccccccceecCCchhhHhhHHHHHhC
Confidence 0011111 112 3444555666666665 3566654 488888765
No 85
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=88.75 E-value=7 Score=41.23 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=44.6
Q ss_pred cCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcE-EEEecCce
Q 045732 252 LPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNL-SFVQFPQR 330 (697)
Q Consensus 252 ~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v-~~VQ~pq~ 330 (697)
+|++.|+.-..... --.-+-.-|+|...|....++.+|+++|+|.+.. .|-..+++..-.-.+....+ |..--|..
T Consensus 61 ~~~~~yl~~~s~~~--F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGSPEP--FASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCCCcc--ccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 35566666433211 1111334455555544446799999999999996 55555554322211111234 56667888
Q ss_pred eccCC
Q 045732 331 FRGLS 335 (697)
Q Consensus 331 f~n~~ 335 (697)
+-|..
T Consensus 138 ~LNk~ 142 (346)
T COG4092 138 HLNKA 142 (346)
T ss_pred ecchh
Confidence 87754
No 86
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=87.54 E-value=1.6 Score=49.32 Aligned_cols=48 Identities=25% Similarity=0.431 Sum_probs=29.9
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCC-CCceEEEEecCCCCchh
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYP-TDKLSVYVSDDGGCAAT 139 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP-~~kl~v~v~DDg~~~~T 139 (697)
...|.+-|+|-+ ||=| .-+.+||.+++... | +++..|+|+.||+.+.|
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 347788889989 8988 56789999999987 5 46888999999988744
No 87
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=84.39 E-value=13 Score=36.51 Aligned_cols=53 Identities=13% Similarity=0.158 Sum_probs=36.9
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh
Q 045732 255 LIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV 313 (697)
Q Consensus 255 l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 313 (697)
+.+.-.|+| .+|=..=....+..+..-+.++++.+||-+.|. +++|-++..-|
T Consensus 111 ~ifclKe~N-----~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P~-~~siy~Lwkaf 163 (163)
T PF01644_consen 111 IIFCLKEKN-----AKKINSHRWFFNAFCRQLQPNVCVLLDVGTKPG-KDSIYHLWKAF 163 (163)
T ss_pred EEEEecccc-----ccccchhhHHHHHHHhhcCCcEEEEEecCCCcC-chHHHHHHhhC
Confidence 556667775 456444444444434457899999999999995 99998876543
No 88
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=84.24 E-value=5.3 Score=42.43 Aligned_cols=55 Identities=11% Similarity=0.144 Sum_probs=38.1
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEE-EEecCCCC-chhhHhHHH
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSV-YVSDDGGC-AATLFGFVE 145 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v-~v~DDg~~-~~T~~~l~e 145 (697)
.+-|+|=|+.|- -| ......+=...+..++||++++++ +++.|... +.|...|.+
T Consensus 22 ~~~e~VLILtpl---rn-a~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~ 78 (269)
T PF03452_consen 22 RNKESVLILTPL---RN-AASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEA 78 (269)
T ss_pred ccCCeEEEEEec---CC-chHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHH
Confidence 457888888887 33 334678888899999999999998 45555441 555444444
No 89
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=79.19 E-value=3.7 Score=48.85 Aligned_cols=44 Identities=11% Similarity=0.029 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS 314 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 314 (697)
+.||+-+|=-++-.+. ....+||-++|||.++ |.++.+-+..|.
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ya 189 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFA 189 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHH
Confidence 5788888877765432 3678999999999998 688888766554
No 90
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=77.99 E-value=2.2 Score=36.67 Aligned_cols=30 Identities=23% Similarity=0.119 Sum_probs=19.3
Q ss_pred cCccCCCc---cchHHHHHHHHhCCcEEEEeCC
Q 045732 427 MGFRYGSL---TEDYYTGYRLHCEGWRSIYCTP 456 (697)
Q Consensus 427 gG~~~~sv---tED~~t~~~l~~~Gwrsvy~~~ 456 (697)
+||++.-. -||.+.+.|+..+|.++...+.
T Consensus 35 nGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 35 NGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp TSS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred CCCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence 77765433 4999999999999999877654
No 91
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=70.39 E-value=9.4 Score=41.94 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=29.2
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV 313 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 313 (697)
+.||+-+|=-++-.+. ....+||-++|||.+. |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 5789998887776532 3678999999999997 78888765543
No 92
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=66.68 E-value=1.3e+02 Score=38.81 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=96.6
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCC--CCCCCCCcHHHHHHHHhcCCC-CCCcEEEEecCceeccCCc---chHHH
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDC--DTSSNDPQTPLRVLCYVSNPV-TRSNLSFVQFPQRFRGLSS---NDIYA 341 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDA--D~~~~~p~~L~~~v~~f~dp~-~~~~v~~VQ~pq~f~n~~~---~d~~~ 341 (697)
..||.-|.|+|+-. +.||+|-.+|+ |.+.++-=-+|.++.-|.... ..+.++++....+....+. .+-.+
T Consensus 1049 GeGKpeNQNhaiiF----tRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms 1124 (1679)
T KOG0916|consen 1049 GEGKPENQNHAIIF----TRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMS 1124 (1679)
T ss_pred CCCCCcccCceeee----ecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHc
Confidence 47899999999986 89999999999 444421111234444444222 1234566655543332211 12222
Q ss_pred HHHHHHHHHHHHHHhhcCC-eeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccc
Q 045732 342 AEFRRLFFVNLLGFDGLKG-ATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENR 420 (697)
Q Consensus 342 ~~~~~f~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~ 420 (697)
++...|=-.-++-+...++ -+.-|.=-++.|-.. +
T Consensus 1125 ~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~--~------------------------------------------ 1160 (1679)
T KOG0916|consen 1125 GQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFH--I------------------------------------------ 1160 (1679)
T ss_pred cCccchhhHHHHHhccccceeeecCCCcHhhhhhh--h------------------------------------------
Confidence 3322222222333443433 233344334433111 1
Q ss_pred cccccccCccC----CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecC-CCHHHHHHHHHHHccCcchhhhhccCccc
Q 045732 421 TNWGSKMGFRY----GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAP-ITLFDFINQYKRWAIGGLQMAFARYSPFT 495 (697)
Q Consensus 421 t~wg~~gG~~~----~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP-~tl~~~l~Qr~RWa~G~lqi~~~~~~Pl~ 495 (697)
..||... -.++||+..|+.-..||-++.+|+-- ..|-.- -.+.+-..=-..-+.|+=|-.++|.-=.+
T Consensus 1161 ----TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EYi---QvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL 1233 (1679)
T KOG0916|consen 1161 ----TRGGVSKASKGINLSEDIFAGFNATLRGGNITHHEYI---QVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL 1233 (1679)
T ss_pred ----ccccchHhhcccccchHhhhhhhHHhhCCCcccceee---ecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh
Confidence 0155542 36899999999999999999988731 222211 12233333345678888888887652222
Q ss_pred ccCCCchHHH
Q 045732 496 VGTKTIGLMG 505 (697)
Q Consensus 496 ~~~~~l~~qr 505 (697)
| .++.+-|
T Consensus 1234 -G-~~ldffR 1241 (1679)
T KOG0916|consen 1234 -G-TQLDFFR 1241 (1679)
T ss_pred -c-ccccHHH
Confidence 3 4566633
No 93
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=64.31 E-value=63 Score=37.47 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=36.7
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHH
Q 045732 255 LIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRV 309 (697)
Q Consensus 255 l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~ 309 (697)
+.++..... .-.++.+|+.|++.. .+.++++++|.|+..+ +++|.++
T Consensus 316 i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 316 IKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred eEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 445555421 467999999999963 5678999999999996 9999876
No 94
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=56.58 E-value=16 Score=39.78 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=31.6
Q ss_pred HHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 045732 276 NAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFV 325 (697)
Q Consensus 276 N~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~V 325 (697)
|.|+.. +..++++++|+|++|. +++-.++..+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 555554 7899999999999996 88776666554432233466776
No 95
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=43.92 E-value=1.8e+02 Score=30.30 Aligned_cols=55 Identities=16% Similarity=0.144 Sum_probs=35.2
Q ss_pred cCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEe--CCCCCCCCCcHHHHHHHHhc
Q 045732 252 LPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTL--DCDTSSNDPQTPLRVLCYVS 314 (697)
Q Consensus 252 ~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~l--DAD~~~~~p~~L~~~v~~f~ 314 (697)
+|+++.+.++. +....++..+++... ...+++++.+ |.|--+. .||++++-.+..
T Consensus 84 ~p~~~i~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 84 YPQFRIVFRPP------GPHRDAMRRAINAAR-RDGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred CCCcEEEecCC------chHHHHHHHHHhhhc-cCCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 34455555543 335577777774321 1345655555 9988885 999999888875
No 96
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=41.42 E-value=33 Score=38.38 Aligned_cols=36 Identities=28% Similarity=0.071 Sum_probs=29.7
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHH
Q 045732 271 KAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLC 311 (697)
Q Consensus 271 KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~ 311 (697)
|--|+|.|=. .-+|||++.|+|.++.++|.|.-.+.
T Consensus 98 Keea~~~~r~-----~~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARS-----GWADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHh-----hhcceeEEeehhheeeCCchHhHHHh
Confidence 6678887765 46899999999999999999876665
No 97
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=39.98 E-value=70 Score=35.76 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=30.8
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC
Q 045732 271 KAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 271 KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d 315 (697)
...++-+|++. .+.|++++.|||+=.-+++.+++++..+.+
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 46778888886 345999999999644358999988876653
No 98
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=36.34 E-value=47 Score=34.86 Aligned_cols=27 Identities=22% Similarity=0.123 Sum_probs=22.4
Q ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHh
Q 045732 286 TNAPIILTLDCDTSSNDPQTPLRVLCYV 313 (697)
Q Consensus 286 s~ge~Il~lDAD~~~~~p~~L~~~v~~f 313 (697)
++.+.++.+|-|++++ .+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC
Confidence 5789999999999995 99998888766
No 99
>PLN03153 hypothetical protein; Provisional
Probab=33.74 E-value=1.2e+02 Score=35.42 Aligned_cols=29 Identities=24% Similarity=0.225 Sum_probs=23.9
Q ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHhcCC
Q 045732 286 TNAPIILTLDCDTSSNDPQTPLRVLCYVSNP 316 (697)
Q Consensus 286 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp 316 (697)
.+.+.++++|.|++.. .+-|.+.+.-+ |+
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dp 237 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DP 237 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CC
Confidence 7889999999999996 88777777655 44
No 100
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=31.77 E-value=1.2e+02 Score=33.83 Aligned_cols=37 Identities=27% Similarity=0.478 Sum_probs=27.4
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHH
Q 045732 271 KAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRV 309 (697)
Q Consensus 271 KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~ 309 (697)
.-.+|+..++..+ ..++|+|++-|+|.+|+ |++|..+
T Consensus 163 qR~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 163 QRNALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 4456665555544 46799999999999995 9888644
No 101
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=26.93 E-value=6e+02 Score=25.89 Aligned_cols=58 Identities=5% Similarity=-0.069 Sum_probs=40.1
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEe
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQ 326 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ 326 (697)
.+...++.+++.......+.|.|++++||+=.-+++.+.+++..|.+.+.+.-++++.
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~ 133 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTS 133 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeec
Confidence 4566777777775311134799999999998777899999999887543333444444
No 102
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=26.70 E-value=1.5e+02 Score=28.38 Aligned_cols=45 Identities=18% Similarity=0.103 Sum_probs=34.9
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCC-CCCCCcHHHHHHHHhcC
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDT-SSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~-~~~~p~~L~~~v~~f~d 315 (697)
..+-+.++..|++... .+.|.+++++||+ .+ +++.+++++..+.+
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 118 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLV-TAETLRALIDAFRE 118 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCC-CHHHHHHHHHHHHh
Confidence 3567888999998732 1479999999999 55 48999998887753
No 103
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=24.07 E-value=1.7e+02 Score=31.95 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=38.9
Q ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccC
Q 045732 286 TNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGL 334 (697)
Q Consensus 286 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~ 334 (697)
.+.+||++++-|+.+.++.++..++.-|.+. ++-++|-...++|.
T Consensus 117 ~~~~yivVvEddnT~~~~~~l~~~I~aM~~k----~idilQLre~~~~~ 161 (325)
T PF03213_consen 117 PEDKYIVVVEDDNTLRDITTLHPIIKAMKKK----NIDILQLRETYHNS 161 (325)
T ss_pred CCCCeEEEEeCCCcccccHHHHHHHHHHHHc----CceEEEEehhhhcc
Confidence 5789999999999999899999999888864 68999988877764
No 104
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=24.02 E-value=1.3e+02 Score=29.23 Aligned_cols=43 Identities=21% Similarity=0.151 Sum_probs=34.6
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCC-CCCCCcHHHHHHHHhcC
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDT-SSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~-~~~~p~~L~~~v~~f~d 315 (697)
..+-.+++-.|++. .+.|.+++++||+ .+ +++.+++++..+.+
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 115 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFL-PEDLVARLAAALEA 115 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcC-CHHHHHHHHHHhhc
Confidence 35678888888886 4578999999999 66 49999999887753
No 105
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=23.72 E-value=2.5e+02 Score=27.99 Aligned_cols=44 Identities=20% Similarity=0.058 Sum_probs=34.0
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCC-CCCCCcHHHHHHHHhcC
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDT-SSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~-~~~~p~~L~~~v~~f~d 315 (697)
.+.++++-+|+.... .+.+.+++++||+ .. +++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHHh
Confidence 578999999998632 1268899999999 44 37888888887754
No 106
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=23.07 E-value=65 Score=31.98 Aligned_cols=37 Identities=24% Similarity=0.265 Sum_probs=28.2
Q ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHh
Q 045732 273 GALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYV 313 (697)
Q Consensus 273 GaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 313 (697)
.+++.+.+.. .+.+|++..|-|++++ ++.|.+.+.-.
T Consensus 69 ~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 69 AGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 5667777652 5689999999999995 88877766544
Done!