Query 045732
Match_columns 697
No_of_seqs 284 out of 2007
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 08:18:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045732.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045732hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 9.8E-55 3.3E-59 517.0 49.0 501 12-695 62-579 (802)
2 3bcv_A Putative glycosyltransf 99.8 3E-18 1E-22 172.2 16.4 194 88-457 3-220 (240)
3 1xhb_A Polypeptide N-acetylgal 99.8 2.6E-18 8.9E-23 191.7 15.5 235 87-495 26-301 (472)
4 2z86_A Chondroitin synthase; G 99.8 4.1E-18 1.4E-22 196.5 16.7 213 88-471 91-337 (625)
5 1qg8_A Protein (spore coat pol 99.7 3.2E-18 1.1E-22 173.8 8.8 214 90-482 1-235 (255)
6 2d7i_A Polypeptide N-acetylgal 99.7 1.3E-17 4.5E-22 191.1 10.8 239 87-494 109-378 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.7 4.6E-17 1.6E-21 183.3 14.6 194 87-456 63-284 (501)
8 2z86_A Chondroitin synthase; G 99.7 1.4E-16 4.9E-21 183.5 10.6 221 88-487 373-598 (625)
9 3ckj_A Putative uncharacterize 99.6 1E-14 3.6E-19 155.5 13.8 122 87-328 45-169 (329)
10 4fix_A UDP-galactofuranosyl tr 99.5 3.1E-14 1E-18 165.7 13.3 228 88-479 178-438 (657)
11 3l7i_A Teichoic acid biosynthe 99.5 1.1E-15 3.7E-20 180.0 0.0 193 90-455 2-198 (729)
12 2fy7_A Beta-1,4-galactosyltran 99.4 2.4E-13 8.1E-18 143.0 9.8 135 271-488 113-264 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 99.3 6.4E-12 2.2E-16 137.4 14.3 121 88-327 92-216 (387)
14 2nxv_A ATP synthase subunits r 99.1 4.4E-10 1.5E-14 114.9 14.7 47 271-326 62-113 (249)
15 2bo4_A Mannosylglycerate synth 98.7 1.4E-07 4.6E-12 103.4 13.9 43 268-315 73-120 (397)
16 1fo8_A Alpha-1,3-mannosyl-glyc 97.8 1.6E-05 5.4E-10 85.4 6.7 46 89-139 1-46 (343)
17 2wvl_A Mannosyl-3-phosphoglyce 97.8 8.4E-05 2.9E-09 79.2 11.7 42 89-139 52-93 (391)
18 2zu9_A Mannosyl-3-phosphoglyce 97.8 4.9E-05 1.7E-09 82.6 10.2 39 268-312 142-183 (394)
19 3lw6_A FI08434P, beta-4-galact 81.5 2.9 0.0001 43.1 7.4 140 268-488 96-251 (287)
20 2c0n_A A197; thermophil protei 64.0 11 0.00039 36.8 6.3 25 286-311 52-79 (203)
21 2j0a_A Beta-1,3-N-acetylglucos 39.5 21 0.00073 36.4 4.1 30 286-317 92-121 (280)
22 3q80_A 2-C-methyl-D-erythritol 38.0 61 0.0021 31.9 7.0 45 271-315 83-127 (231)
23 3d5n_A Q97W15_sulso; NESG, SSR 24.1 1.1E+02 0.0038 28.7 6.0 41 269-313 71-112 (197)
24 2xwl_A 2-C-methyl-D-erythritol 21.6 1.4E+02 0.0048 28.1 6.3 40 270-313 78-118 (223)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=9.8e-55 Score=516.99 Aligned_cols=501 Identities=22% Similarity=0.297 Sum_probs=382.2
Q ss_pred chhhHHHHHHH-HHHHHHHHHHHHhh-ccCCC----hhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCchhhhccCC
Q 045732 12 RTALNRVFAAV-YTCAIFGLLYHHVQ-IIHSR----TPLASLSLLLSDTVLAFMWATMQVFRMRPIRRKEFPENLLKVMK 85 (697)
Q Consensus 12 ~~~~~r~~~~~-~~~~~~~yl~~R~~-~~~~~----~~~w~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~ 85 (697)
++. .|++.++ .+++.+.|++||++ +++.. .++++++++++|++..+.|++..+..++|..|.+.++. .
T Consensus 62 ~~~-~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~-----~ 135 (802)
T 4hg6_A 62 KMV-PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL-----Q 135 (802)
T ss_dssp SHH-HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC-----C
T ss_pred Ccc-hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC-----C
Confidence 444 4444444 44455679999999 66632 23445899999999999999999999999988765542 2
Q ss_pred CCCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccC
Q 045732 86 PSEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 86 ~~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
+++.|+|+|+||| |||+++++++|+.|+++++||+++++|+|+|||++|.|.+....
T Consensus 136 ~~~~P~VSViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~-------------------- 192 (802)
T 4hg6_A 136 PEELPTVDILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDP-------------------- 192 (802)
T ss_dssp TTTCCCEEEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSH--------------------
T ss_pred ccCCCcEEEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCH--------------------
Confidence 3568999999999 99999899999999999999999999999999999988532000
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
+..++.++.++++ ++..+
T Consensus 193 --------------~i~~~~~~~~~~l----~~~~~-------------------------------------------- 210 (802)
T 4hg6_A 193 --------------ELAQKAQERRREL----QQLCR-------------------------------------------- 210 (802)
T ss_dssp --------------HHHHHHHHHHHHH----HHHHH--------------------------------------------
T ss_pred --------------HHHHHHHhhhHHH----HHHHH--------------------------------------------
Confidence 0001111111111 11000
Q ss_pred CCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEE
Q 045732 246 DTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSF 324 (697)
Q Consensus 246 ~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~ 324 (697)
-.++.|+.|+++ +++|++|+|.|++. ++||||+++|||++++ ||+|+++++.|. || ++++
T Consensus 211 ------~~~v~~i~~~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp----~v~~ 271 (802)
T 4hg6_A 211 ------ELGVVYSTRERN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDP----DLFL 271 (802)
T ss_dssp ------HHTCEEEECSSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSS----SCCE
T ss_pred ------hcCcEEEEecCC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCC----CeEE
Confidence 012678888875 68999999999998 8999999999999995 999999999994 66 6899
Q ss_pred EecCceeccCCcc-------hHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCC
Q 045732 325 VQFPQRFRGLSSN-------DIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVD 397 (697)
Q Consensus 325 VQ~pq~f~n~~~~-------d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~ 397 (697)
||+++.+.|.+.. ..+.++...++...+.+.+.+++++++|+++++||++++++
T Consensus 272 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v------------------- 332 (802)
T 4hg6_A 272 VQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA------------------- 332 (802)
T ss_dssp EECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH-------------------
T ss_pred EeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc-------------------
Confidence 9999999886521 11223446678888999999999999999999999999887
Q ss_pred CCCCchhHHhhhccccccccccccccccccCccCCCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHHHHHHHHH
Q 045732 398 EPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLFDFINQYK 477 (697)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~~~l~Qr~ 477 (697)
|||++++++||.+++++++++|||+.|+++ +.+++.+|+|++++++||.
T Consensus 333 -----------------------------Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~ 381 (802)
T 4hg6_A 333 -----------------------------GGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG 381 (802)
T ss_dssp -----------------------------TTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred -----------------------------CCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence 899999999999999999999999999997 4589999999999999999
Q ss_pred HHccCcchhhhhccCcccccCCCchH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccCChhHHHHHHHHHHH
Q 045732 478 RWAIGGLQMAFARYSPFTVGTKTIGL-MGLAYGHYAIWPIWCIPTLVYALIPQLALLKGVSIFPKVSEPWFLLYVFMFLG 556 (697)
Q Consensus 478 RWa~G~lqi~~~~~~Pl~~~~~~l~~-qrl~y~~~~~~~l~~~~~l~~~l~P~l~ll~g~~~~~~~s~~~~~~~~~~~~~ 556 (697)
||++|.+|+++ +++|+.. +++++ +|+.|+....+++.+++.++++++|++++++|+.++... ...++.+ +++
T Consensus 382 RW~~G~~q~l~-~~~pl~~--~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~-~~~~~~~---~lp 454 (802)
T 4hg6_A 382 RWATGMMQMLL-LKNPLFR--RGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVAT-FEEVLAY---MPG 454 (802)
T ss_dssp HHHHHHHHHHH-HSCTTSC--SSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCC-HHHHHHH---HHH
T ss_pred HHHccHHHHHH-HhCcccc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcC-HHHHHHH---HHH
Confidence 99999999998 5678774 78999 999999988888999999999999999999999888643 2222222 223
Q ss_pred HHHHHHHHH-HHhCCcccccchhhhhHHhhhhhhhHHHHHHHHHHHhcCCCCCeeeCCCCCCccchhhhhhccccccccc
Q 045732 557 AYGQDFIEF-VLEGGTFGKWWNDQRMWMIMGPSCFLFGSFEYLLKSLGISAFGFNVTSKVLDNDQSKRYELEMFDFGVPS 635 (697)
Q Consensus 557 ~~~~~ll~~-~~~G~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~ 635 (697)
+++...+.. ...|.....||... ..+...++.+..++..++++++.+|+||+|+...+.. + + +
T Consensus 455 ~~l~~~~~~~~~~~~~r~~~~~~l-----~~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~-------~-~---~ 518 (802)
T 4hg6_A 455 YLAVSFLVQNALFARQRWPLVSEV-----YEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN-------Y-I---S 518 (802)
T ss_dssp HHHHHHHHHHHHHTTTSCTTHHHH-----HHHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC-------C-B---C
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHH-----HHHHHHHHHHHHHHHHHhCCCCCcceECCCCcccccc-------c-h---h
Confidence 222222211 12343333455433 2233344444555667788899999999998754321 1 1 3
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhccCC-ChhHHHHHHHHHHHHHHHHHHHHHHhHhcccC
Q 045732 636 PMFVPLAMAAIINLFSFFLGLLKMVGGS-DKEGLVLQMLIAGFIMVNCWPIYEAMVLRSDA 695 (697)
Q Consensus 636 ~l~~P~~~l~~l~l~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~l~p~~~~l~~r~~~ 695 (697)
.+++|++++++++++++++|++++..+. .....+++++|++||++++.+.+....+|+.+
T Consensus 519 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~ 579 (802)
T 4hg6_A 519 PIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQR 579 (802)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5678999999999999999999987553 44567889999999999999988888776543
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.77 E-value=3e-18 Score=172.23 Aligned_cols=194 Identities=12% Similarity=0.051 Sum_probs=131.9
Q ss_pred CCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCc
Q 045732 88 EFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNP 167 (697)
Q Consensus 88 ~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p 167 (697)
..|.|+|+||+ ||++ ..+.+||.|+++++||+ ++|+|+|||++|.|.+.+.+
T Consensus 3 ~~p~vsViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~---------------------- 54 (240)
T 3bcv_A 3 LIPKVSVIVPI---YNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDD---------------------- 54 (240)
T ss_dssp CCCSEEEEEEE---SSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHH----------------------
T ss_pred CCCcEEEEEec---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHH----------------------
Confidence 36899999999 9998 57789999999999985 89999999999977322222
Q ss_pred ccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCC
Q 045732 168 ETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDT 247 (697)
Q Consensus 168 ~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~ 247 (697)
+.+
T Consensus 55 ---------------------~~~-------------------------------------------------------- 57 (240)
T 3bcv_A 55 ---------------------YAA-------------------------------------------------------- 57 (240)
T ss_dssp ---------------------HHH--------------------------------------------------------
T ss_pred ---------------------HHh--------------------------------------------------------
Confidence 100
Q ss_pred CCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEec
Q 045732 248 TGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQF 327 (697)
Q Consensus 248 ~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~ 327 (697)
..|++.+++. + +.|+++|.|.|++. ++||||+++|+|.++. |++|.+++..+.+++ .++ |.+
T Consensus 58 ---~~~~i~~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~~~--~~~--v~~ 119 (240)
T 3bcv_A 58 ---QYPNIKVIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYVD-SDMYMTMYNVAQKYT--CDA--VFT 119 (240)
T ss_dssp ---HCSSEEEEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCCC-TTHHHHHHHHHHHHT--CSE--EEC
T ss_pred ---hCCCEEEEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcCC-HHHHHHHHHHHHhcC--CCE--EEE
Confidence 0134666653 2 47899999999998 8999999999999995 999999999987632 133 333
Q ss_pred CceeccCCcc------------hHHHHHHHHHHHHHHHHHhhcCC---------eeeeeeeEeeehhhhcCCCCCCCCCC
Q 045732 328 PQRFRGLSSN------------DIYAAEFRRLFFVNLLGFDGLKG---------ATYVGTGTFFCRRALFGSPSNLISPE 386 (697)
Q Consensus 328 pq~f~n~~~~------------d~~~~~~~~f~~~~~~g~~~~~~---------~~~~Gtg~~~RR~aL~~i~~~~~~~~ 386 (697)
.....+.+.. ..+... . ... ... ...+. ...+|++.++||+++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~-------- 186 (240)
T 3bcv_A 120 GLKRITMAGIPTGTVTHQKEFKLYKNKN-E-IHT-LLK--DLIASDPYAREERAIQVSAKVVLYRRNLIEKK-------- 186 (240)
T ss_dssp --------------------CEEECSHH-H-HHH-HHG--GGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHT--------
T ss_pred eeEEEccCCccccccccccccccccCHH-H-HHH-HHH--HHhhcchhhccccccccchhheeeeHHHHHHc--------
Confidence 2211111110 000000 0 000 000 00110 113467889999999886
Q ss_pred CCCCCCCCCCCCCCCchhHHhhhcccccccccccccccccc-CccCC--CccchHHHHHHHHhCCcEEEEeCCC
Q 045732 387 IPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM-GFRYG--SLTEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g-G~~~~--svtED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
| ||+.+ ...||.+.++++..+|+++.|+++.
T Consensus 187 ----------------------------------------g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 187 ----------------------------------------HLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp ----------------------------------------TCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred ----------------------------------------CCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 7 88876 4689999999999999999999863
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.76 E-value=2.6e-18 Score=191.68 Aligned_cols=235 Identities=13% Similarity=-0.009 Sum_probs=160.6
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCch-hhHhHHHHHHhhhhccccccccCcccC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAA-TLFGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~-T~~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
+++|.|+|+||+ |||+.+.+.+||.|+++++||...++|+|+|||++|. |.+.+.+
T Consensus 26 ~~~p~vSVIIp~---yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~-------------------- 82 (472)
T 1xhb_A 26 DNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------- 82 (472)
T ss_dssp SCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH--------------------
T ss_pred cCCCCeEEEEEe---CCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHH--------------------
Confidence 568999999999 9999668889999999999998678999999999984 5221111
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
|.+
T Consensus 83 -----------------------~~~------------------------------------------------------ 85 (472)
T 1xhb_A 83 -----------------------YVK------------------------------------------------------ 85 (472)
T ss_dssp -----------------------HHH------------------------------------------------------
T ss_pred -----------------------HHH------------------------------------------------------
Confidence 100
Q ss_pred CCCCCCcC-eEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 045732 246 DTTGHFLP-NLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSF 324 (697)
Q Consensus 246 ~~~~~~~p-~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~ 324 (697)
.+| ++.++..++| .|+++|+|.|++. +.||+|+++|+|..++ |++|.+++..+.+.. .+++
T Consensus 86 -----~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~---~~~v 147 (472)
T 1xhb_A 86 -----KLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDR---RTVV 147 (472)
T ss_dssp -----SSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCT---TEEE
T ss_pred -----HCCCcEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECCCeEeC-ccHHHHHHHHHHhCC---CEEE
Confidence 123 4777777764 6799999999998 8999999999999995 999999999887321 3443
Q ss_pred EecCceeccCCcc---------------------hHHHHHHHHHHHHHHHHHh---hcCCeeeeeeeEeeehhhhcCCCC
Q 045732 325 VQFPQRFRGLSSN---------------------DIYAAEFRRLFFVNLLGFD---GLKGATYVGTGTFFCRRALFGSPS 380 (697)
Q Consensus 325 VQ~pq~f~n~~~~---------------------d~~~~~~~~f~~~~~~g~~---~~~~~~~~Gtg~~~RR~aL~~i~~ 380 (697)
+.. ....+.+.. ....... . ..+..+ ....+...|++.++||+++.++
T Consensus 148 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i-- 219 (472)
T 1xhb_A 148 CPI-IDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQRE-M----DRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI-- 219 (472)
T ss_dssp EEE-EEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHH-H----HHTTTCTTSCEECSBCCSSSEEEEHHHHHHT--
T ss_pred Eee-eeeEcCCCceeccCCCcccceeeccceeecccCCHHH-H----hcccCCCCCcccCccccceeEEEEHHHHHHc--
Confidence 321 111111000 0000000 0 000001 1223456788888999999887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccCccCCCc---cchHHHHHHHHhCCcEEEEeCCC
Q 045732 381 NLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSL---TEDYYTGYRLHCEGWRSIYCTPD 457 (697)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~sv---tED~~t~~~l~~~Gwrsvy~~~~ 457 (697)
|||+++.. .||+++++|+...|+++.|++..
T Consensus 220 ----------------------------------------------Ggfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~ 253 (472)
T 1xhb_A 220 ----------------------------------------------GTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCS 253 (472)
T ss_dssp ----------------------------------------------TSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEE
T ss_pred ----------------------------------------------CCCCCcccccCchhHHHHHHHHhcCCeEEEccCc
Confidence 88987654 79999999999999999999863
Q ss_pred CCcee---eecCCC---------HHHHHHHHHHHccCcchhhhhccCccc
Q 045732 458 RPAFY---GDAPIT---------LFDFINQYKRWAIGGLQMAFARYSPFT 495 (697)
Q Consensus 458 ~~~~~---g~aP~t---------l~~~l~Qr~RWa~G~lqi~~~~~~Pl~ 495 (697)
. ..+ ...|.+ .....+...||..+..+.++. .+|..
T Consensus 254 ~-v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~-~~p~~ 301 (472)
T 1xhb_A 254 H-VGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYI-ISPGV 301 (472)
T ss_dssp E-EEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHH-TSTTG
T ss_pred E-EEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-hCccc
Confidence 2 111 112221 456677778999999988873 45643
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.76 E-value=4.1e-18 Score=196.45 Aligned_cols=213 Identities=19% Similarity=0.163 Sum_probs=147.8
Q ss_pred CCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCc
Q 045732 88 EFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNP 167 (697)
Q Consensus 88 ~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p 167 (697)
..|.|+|+||| |||+ ..+.+||.++++++||. .++|+|+|||++|.|.+.+.+
T Consensus 91 ~~p~vsviIp~---~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~---------------------- 143 (625)
T 2z86_A 91 IIDGLSIVIPT---YNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE---------------------- 143 (625)
T ss_dssp CCCCEEEEEEE---SSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT----------------------
T ss_pred cCCcEEEEEec---CCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH----------------------
Confidence 46899999999 9998 68889999999999986 589999999999965211111
Q ss_pred ccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCC
Q 045732 168 ETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDT 247 (697)
Q Consensus 168 ~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~ 247 (697)
+.
T Consensus 144 ---------------------~~--------------------------------------------------------- 145 (625)
T 2z86_A 144 ---------------------FE--------------------------------------------------------- 145 (625)
T ss_dssp ---------------------TT---------------------------------------------------------
T ss_pred ---------------------hh---------------------------------------------------------
Confidence 00
Q ss_pred CCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEe
Q 045732 248 TGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQ 326 (697)
Q Consensus 248 ~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ 326 (697)
..+.+.|+.++++ .++|++|+|.|++. ++||+|+++|+|.++. |++|.+++..|. +| .+++++
T Consensus 146 ---~~~~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~~~g 209 (625)
T 2z86_A 146 ---SLLNIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAPN-PLWVQSYMELLAVDD----NVALIG 209 (625)
T ss_dssp ---TTSCEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEEC-TTHHHHHHHHHHHCT----TEEEEC
T ss_pred ---hcCCeEEEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCCC-HHHHHHHHHHHhcCC----ceEEEE
Confidence 0123677776643 46899999999998 8999999999999995 999999999987 44 578777
Q ss_pred cCceeccCCcc-hHHHHH------------HHHHHHH------------HHHHHhh---cCC--eeeeeeeEeeehhhhc
Q 045732 327 FPQRFRGLSSN-DIYAAE------------FRRLFFV------------NLLGFDG---LKG--ATYVGTGTFFCRRALF 376 (697)
Q Consensus 327 ~pq~f~n~~~~-d~~~~~------------~~~f~~~------------~~~g~~~---~~~--~~~~Gtg~~~RR~aL~ 376 (697)
..+.+.+.... ..+... ...+.+. .....+. ... ..++|++.++||+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~ 289 (625)
T 2z86_A 210 PRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLF 289 (625)
T ss_dssp CEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHH
T ss_pred eeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHH
Confidence 66554432210 000000 0000000 0000011 111 2478999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccCccCCCc---cchHHHHHHHHhCCcEEEE
Q 045732 377 GSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSL---TEDYYTGYRLHCEGWRSIY 453 (697)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~sv---tED~~t~~~l~~~Gwrsvy 453 (697)
++ |||++... .||.++++|++.+||++.|
T Consensus 290 ~i------------------------------------------------Ggfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 321 (625)
T 2z86_A 290 RA------------------------------------------------GWFDEEFTHWGGEDNEFGYRLYREGCYFRS 321 (625)
T ss_dssp HH------------------------------------------------CCCCTTCSSCCCHHHHHHHHHHHTTCEEEE
T ss_pred Hh------------------------------------------------CCCccccccCCcchhhhhhhHHhCCceEEE
Confidence 87 88987654 5999999999999999999
Q ss_pred eCCCCCceeeecCCCHHH
Q 045732 454 CTPDRPAFYGDAPITLFD 471 (697)
Q Consensus 454 ~~~~~~~~~g~aP~tl~~ 471 (697)
+++. .++-..|.+-..
T Consensus 322 ~p~~--~v~H~~~~~~~~ 337 (625)
T 2z86_A 322 VEGA--MAYHQEPPGKEN 337 (625)
T ss_dssp CGGG--CEEEECCC----
T ss_pred cccc--hhhccCCccccc
Confidence 9974 355666655443
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.73 E-value=3.2e-18 Score=173.82 Aligned_cols=214 Identities=10% Similarity=0.042 Sum_probs=140.8
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|.|+|+||| ||++ ..+.+||.|+++++||. ++|+|+|||++|.|.+.+.+
T Consensus 1 p~vSViIp~---yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~------------------------ 50 (255)
T 1qg8_A 1 PKVSVIMTS---YNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRP------------------------ 50 (255)
T ss_dssp CCEEEEEEE---SSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGG------------------------
T ss_pred CeEEEEEEc---CCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHH------------------------
Confidence 789999999 9999 67889999999999995 89999999999976211111
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
|.
T Consensus 51 -------------------~~----------------------------------------------------------- 52 (255)
T 1qg8_A 51 -------------------FL----------------------------------------------------------- 52 (255)
T ss_dssp -------------------GG-----------------------------------------------------------
T ss_pred -------------------Hh-----------------------------------------------------------
Confidence 00
Q ss_pred CCcCeEEEEEcc--------CCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCC
Q 045732 250 HFLPNLIYVSRE--------KSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRS 320 (697)
Q Consensus 250 ~~~p~l~yv~R~--------k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~ 320 (697)
..|++.|+..+ + +.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..+. +|
T Consensus 53 -~~~~i~~i~~~~~~~~~~~~-----n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~---- 117 (255)
T 1qg8_A 53 -NDNRVRFYQSDISGVKERTE-----KTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHP---- 117 (255)
T ss_dssp -GSTTEEEEECCCCSHHHHHS-----SCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCT----
T ss_pred -hcCCEEEEeccccccccccc-----ccCHHHHHHHHHHH----cCCCEEEEeCCCCccC-hHHHHHHHHHHHhCC----
Confidence 01236677766 4 36899999999998 8999999999999995 999999999887 44
Q ss_pred cEEEEecCceec--cCCcchHHHHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCC
Q 045732 321 NLSFVQFPQRFR--GLSSNDIYAAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDE 398 (697)
Q Consensus 321 ~v~~VQ~pq~f~--n~~~~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~ 398 (697)
++++|.+..... +.+... ....... .............|++.++||+++.++
T Consensus 118 ~~~~v~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~rr~~~~~~-------------------- 171 (255)
T 1qg8_A 118 EKAVIYSASKTYHLNENRDI-VKETVRP-----AAQVTWNAPCAIDHCSVMHRYSVLEKV-------------------- 171 (255)
T ss_dssp TCCEEEEEEEEEEEC---CE-EEEEEEC-----CCSCBSCCTTTSCGGGEEEETHHHHHH--------------------
T ss_pred CceEEEeceEEEEeCCCCcc-hhhccCc-----hHHHHHhhcCCCccceEEEEHHHHHhh--------------------
Confidence 467776665444 321110 0000000 000011223345788899999999876
Q ss_pred CCCchhHHhhhcccccccccccccccccc-Cc------cC-CCccchHHHHHHHHhCCcEEEEeCCCCCceeeecCCCHH
Q 045732 399 PIQSPSILSLAHHVASCNYENRTNWGSKM-GF------RY-GSLTEDYYTGYRLHCEGWRSIYCTPDRPAFYGDAPITLF 470 (697)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~ye~~t~wg~~g-G~------~~-~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~tl~ 470 (697)
| || .. ....||.+..+++..+| +++|+++.. ..+-..+.+..
T Consensus 172 ----------------------------g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~-~~~r~~~~s~s 221 (255)
T 1qg8_A 172 ----------------------------KEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEEL-DLNYITDQSIH 221 (255)
T ss_dssp ----------------------------HHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEE-EEEEEC-----
T ss_pred ----------------------------cccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcE-EEEEEcCCccc
Confidence 5 66 32 35689999999999987 688888742 34555666666
Q ss_pred HHH--HHHHHHccC
Q 045732 471 DFI--NQYKRWAIG 482 (697)
Q Consensus 471 ~~l--~Qr~RWa~G 482 (697)
... +|+.+|.+.
T Consensus 222 ~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 222 FQLFELEKNEFVRN 235 (255)
T ss_dssp ---------CTGGG
T ss_pred hhHHHHHHHHHHHh
Confidence 655 455555443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.71 E-value=1.3e-17 Score=191.11 Aligned_cols=239 Identities=14% Similarity=0.076 Sum_probs=161.0
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhh-HhHHHHHHhhhhccccccccCcccC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATL-FGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~-~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
++.|.|+|+||+ |||+...+.+||.|++++.||...++|+|+|||++|.|+ +.+.+
T Consensus 109 ~~~P~vSVIIp~---yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~-------------------- 165 (570)
T 2d7i_A 109 ETLPNTSIIIPF---HNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLED-------------------- 165 (570)
T ss_dssp SSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHH--------------------
T ss_pred CCCCCeEEEEEE---CCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHH--------------------
Confidence 468999999999 999967888999999999999756799999999999762 11111
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
|.
T Consensus 166 -----------------------~~------------------------------------------------------- 167 (570)
T 2d7i_A 166 -----------------------YM------------------------------------------------------- 167 (570)
T ss_dssp -----------------------HH-------------------------------------------------------
T ss_pred -----------------------HH-------------------------------------------------------
Confidence 10
Q ss_pred CCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 045732 246 DTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFV 325 (697)
Q Consensus 246 ~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~V 325 (697)
...|++.+++.++| .++++|.|.|++. ++||+|+++|+|.+++ |++|.+++..+.+.. .+ .|
T Consensus 168 ----~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~~~~-p~~L~~ll~~l~~~~---~~-vv 229 (570)
T 2d7i_A 168 ----ALFPSVRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHCEAN-VNWLPPLLDRIARNR---KT-IV 229 (570)
T ss_dssp ----TTSTTEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCSHHHHHHHHHCT---TE-EE
T ss_pred ----HhCCeEEEEECCCC-----CCHHHHHHHHHHh----cCCCEEEEEcCCcccc-ccHHHHHHHHHHhCC---CE-EE
Confidence 01234777777664 6799999999998 8999999999999995 999999999887532 33 23
Q ss_pred ecCceeccCCcc-------hHHHH--HHHHHHHHHHH--------HHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCC
Q 045732 326 QFPQRFRGLSSN-------DIYAA--EFRRLFFVNLL--------GFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIP 388 (697)
Q Consensus 326 Q~pq~f~n~~~~-------d~~~~--~~~~f~~~~~~--------g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~ 388 (697)
.....+.+.+.. ..... ....++..+.. .......+...|++.++||+++.++
T Consensus 230 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i---------- 299 (570)
T 2d7i_A 230 CPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWEL---------- 299 (570)
T ss_dssp EEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHT----------
T ss_pred eeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhc----------
Confidence 221111111100 00000 00000000000 0011123446788889999999887
Q ss_pred CCCCCCCCCCCCCchhHHhhhccccccccccccccccccCccCCCc---cchHHHHHHHHhCCcEEEEeCCCCCcee---
Q 045732 389 ELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSL---TEDYYTGYRLHCEGWRSIYCTPDRPAFY--- 462 (697)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~sv---tED~~t~~~l~~~Gwrsvy~~~~~~~~~--- 462 (697)
|||+++.. .||+++++|+...||+++|++... ..+
T Consensus 300 --------------------------------------GgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~-v~H~~r 340 (570)
T 2d7i_A 300 --------------------------------------GGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSR-VGHIYR 340 (570)
T ss_dssp --------------------------------------TSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEE-EEECCC
T ss_pred --------------------------------------CCCCCcccccCcchHHHHHHHHhCCCeEEEccCeE-EEEEcc
Confidence 88987643 699999999999999999998642 111
Q ss_pred eecCCC-------HHHHHHHHHHHccCcchhhhhccCcc
Q 045732 463 GDAPIT-------LFDFINQYKRWAIGGLQMAFARYSPF 494 (697)
Q Consensus 463 g~aP~t-------l~~~l~Qr~RWa~G~lqi~~~~~~Pl 494 (697)
+..|.+ .+...+-..||....-+.++. .+|.
T Consensus 341 ~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~-~~p~ 378 (570)
T 2d7i_A 341 KYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ-RRPE 378 (570)
T ss_dssp SSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT-TCGG
T ss_pred ccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh-cCcc
Confidence 123311 456666778999998888773 4463
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.71 E-value=4.6e-17 Score=183.25 Aligned_cols=194 Identities=12% Similarity=0.001 Sum_probs=140.1
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
.++|.|+|+||+ |||+...+.+||.|++++.||...++|+|+|||++|.|..
T Consensus 63 ~~~p~vSVIIp~---yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~------------------------- 114 (501)
T 2ffu_A 63 VDLPATSVVITF---HNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG------------------------- 114 (501)
T ss_dssp SSCCCEEEEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH-------------------------
T ss_pred cCCCCEEEEEEe---CcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH-------------------------
Confidence 568999999999 9999658889999999999997667999999999996520
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
.. .
T Consensus 115 -----------------~~---~--------------------------------------------------------- 117 (501)
T 2ffu_A 115 -----------------AL---L--------------------------------------------------------- 117 (501)
T ss_dssp -----------------HG---G---------------------------------------------------------
T ss_pred -----------------HH---H---------------------------------------------------------
Confidence 00 0
Q ss_pred CCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEe
Q 045732 247 TTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQ 326 (697)
Q Consensus 247 ~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ 326 (697)
...|++.+++.++| .|+++|+|.|++. ++||+|+++|+|..++ |+.|.+++..+.+.. .++|.
T Consensus 118 ---~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~----~~vv~ 180 (501)
T 2ffu_A 118 ---GKIEKVRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCECN-EHWLEPLLERVAEDR----TRVVS 180 (501)
T ss_dssp ---GGBTTEEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCHHHHHHHHHHCT----TEEEE
T ss_pred ---hcCCCEEEEECCCC-----cCHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhCC----CeEEE
Confidence 01234777777764 6799999999998 8999999999999995 999999999887532 23443
Q ss_pred cCceeccCCc----------ch-----------HHHHHHHHHHHHHHHHH----hhcCCeeeeeeeEeeehhhhcCCCCC
Q 045732 327 FPQRFRGLSS----------ND-----------IYAAEFRRLFFVNLLGF----DGLKGATYVGTGTFFCRRALFGSPSN 381 (697)
Q Consensus 327 ~pq~f~n~~~----------~d-----------~~~~~~~~f~~~~~~g~----~~~~~~~~~Gtg~~~RR~aL~~i~~~ 381 (697)
......+.+. .. ...... ..... .....+...|.+.++||+++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--- 251 (501)
T 2ffu_A 181 PIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQ------RRSRQGNPVAPIKTPMIAGGLFVMDKFYFEEL--- 251 (501)
T ss_dssp EEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHH------HHHTSSCTTSCEECSSCCSSSEEEEHHHHHHT---
T ss_pred eeeccCcCCCceeecCCcccceEeeecCCCccccCCHHH------HhhccCCCCCcccCccccceEEEEEHHHHHHh---
Confidence 2111111100 00 000000 00011 11123456788889999999887
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccCccCCCc---cchHHHHHHHHhCCcEEEEeCC
Q 045732 382 LISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYGSL---TEDYYTGYRLHCEGWRSIYCTP 456 (697)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~sv---tED~~t~~~l~~~Gwrsvy~~~ 456 (697)
|||+++.. .||+++++|+...|+++.|++.
T Consensus 252 ---------------------------------------------Ggfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 284 (501)
T 2ffu_A 252 ---------------------------------------------GKYDMMMDVWGGENLEISFRVWQCGGSLEIIPC 284 (501)
T ss_dssp ---------------------------------------------TCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred ---------------------------------------------CCCCccccccCcchHHHHHHHHhcCCeEEEccC
Confidence 88987643 8999999999999999999985
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.65 E-value=1.4e-16 Score=183.54 Aligned_cols=221 Identities=19% Similarity=0.105 Sum_probs=154.1
Q ss_pred CCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCc
Q 045732 88 EFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNP 167 (697)
Q Consensus 88 ~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p 167 (697)
..|.|+|+||| |||+ ..+.+||.|+++++||+ ++|+|+|||++|.|.+.+.+
T Consensus 373 ~~~~vsiii~~---yn~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~---------------------- 424 (625)
T 2z86_A 373 RVPLVSIYIPA---YNCS-KYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQE---------------------- 424 (625)
T ss_dssp SSCSEEEEEEE---SSCT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHH----------------------
T ss_pred cCCeEEEEEeC---CCCH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHH----------------------
Confidence 36899999999 9998 57789999999999985 89999999999977322222
Q ss_pred ccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCC
Q 045732 168 ETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDT 247 (697)
Q Consensus 168 ~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~ 247 (697)
+.
T Consensus 425 ---------------------~~--------------------------------------------------------- 426 (625)
T 2z86_A 425 ---------------------HY--------------------------------------------------------- 426 (625)
T ss_dssp ---------------------HH---------------------------------------------------------
T ss_pred ---------------------HH---------------------------------------------------------
Confidence 10
Q ss_pred CCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhc-CCCCCCcEEEEe
Q 045732 248 TGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVS-NPVTRSNLSFVQ 326 (697)
Q Consensus 248 ~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-dp~~~~~v~~VQ 326 (697)
...|++.+++ ++ +.|+++|+|.|++. ++||||+++|+|.++. |+.|.+++..|. +| ++++|.
T Consensus 427 --~~~~~i~~~~-~~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~~-~~~l~~~~~~~~~~~----~~~~v~ 489 (625)
T 2z86_A 427 --ANHPRVRFIS-QK-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFLE-PDAVELCLDEFRKDL----SLACVY 489 (625)
T ss_dssp --TTCTTEEEEE-EC-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEEC-TTHHHHHHHHHHHCT----TCSEEE
T ss_pred --hhCCcEEEEe-CC-----CCCHHHHHHHHHHh----cCCCEEEEECCCcccC-hhHHHHHHHHHHhCC----CeeEEE
Confidence 0113466665 33 36899999999997 8999999999999995 999999998885 55 467777
Q ss_pred cCceeccCCcchHH-HHHHHHHHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 045732 327 FPQRFRGLSSNDIY-AAEFRRLFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSI 405 (697)
Q Consensus 327 ~pq~f~n~~~~d~~-~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (697)
+...+.+.+..... +.....+ ..+......++|++.++||+++..+
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~r~~~~~~--------------------------- 536 (625)
T 2z86_A 490 TTNRNIDREGNLISNGYNWPIY------SREKLTSAMICHHFRMFTARAWNLT--------------------------- 536 (625)
T ss_dssp EEEEEECTTSCEEEECCCCSSC------CHHHHTTSCCCCSCEEEEHHHHTTT---------------------------
T ss_pred eeeEEECCCCCEeccCcccccC------CHHHHhhcccCCceEEEEHHHHHHh---------------------------
Confidence 65554443211000 0000000 0011224567788899999999887
Q ss_pred HhhhccccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCCCCcee--eecCCCHHHHHHHHHHHccC
Q 045732 406 LSLAHHVASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPDRPAFY--GDAPITLFDFINQYKRWAIG 482 (697)
Q Consensus 406 ~~~~~~~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~~~~~~--g~aP~tl~~~l~Qr~RWa~G 482 (697)
|||++. ...||+++.+++...| ++.|+++.. ..+ .....+......|+.+|.+.
T Consensus 537 ---------------------ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~-~~~r~h~~~~s~~~~~~~~~~~~~~ 593 (625)
T 2z86_A 537 ---------------------EGFNESISNAVDYDMYLKLSEVG-PFKHINKIC-YNRVLHGENTSIKKLDIQKENHFKV 593 (625)
T ss_dssp ---------------------TCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEE-EEEECC----CCSSHHHHHHHHHHH
T ss_pred ---------------------CCCCCccCChHHHHHHHHHHHhC-CEEEeCCcE-EEEEECCCccchhhHHHHHHHHHHH
Confidence 899865 4689999999999999 899998742 111 23445666677777777665
Q ss_pred cchhh
Q 045732 483 GLQMA 487 (697)
Q Consensus 483 ~lqi~ 487 (697)
..+.+
T Consensus 594 ~~~~l 598 (625)
T 2z86_A 594 VNESL 598 (625)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 44443
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.57 E-value=1e-14 Score=155.54 Aligned_cols=122 Identities=16% Similarity=0.074 Sum_probs=90.8
Q ss_pred CCCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 87 SEFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 87 ~~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
...|.|+|+||+ |||+ ..+.+||.|++++.||. ..+|+|+|||++|.|.+.+.+. . .+
T Consensus 45 ~~~~~vSViIp~---yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~---~-------~~------- 102 (329)
T 3ckj_A 45 KAGRTISVVLPA---LDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA---G-------AR------- 102 (329)
T ss_dssp TTTCCEEEEEEE---SSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT---T-------CE-------
T ss_pred ccCCcEEEEEee---CCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh---h-------hh-------
Confidence 346999999999 9999 56789999999999994 4789999999999874333220 0 00
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
+
T Consensus 103 --------------------------------------~----------------------------------------- 103 (329)
T 3ckj_A 103 --------------------------------------V----------------------------------------- 103 (329)
T ss_dssp --------------------------------------E-----------------------------------------
T ss_pred --------------------------------------h-----------------------------------------
Confidence 0
Q ss_pred CCCCCcCeEEEEE-ccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCC-CCCCcHHHHHHHHh-cCCCCCCcEE
Q 045732 247 TTGHFLPNLIYVS-REKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTS-SNDPQTPLRVLCYV-SNPVTRSNLS 323 (697)
Q Consensus 247 ~~~~~~p~l~yv~-R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~-~~~p~~L~~~v~~f-~dp~~~~~v~ 323 (697)
.+++.++. .++ +.||++|+|.|++. ++||||+++|+|.+ +. |++|.+++..+ .+| +++
T Consensus 104 -----~~~~~~~~~~~~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~~~----~~~ 164 (329)
T 3ckj_A 104 -----VSREQALPEVPI-----RPGKGEALWRSLAA----SRGDIVVFVDSDLINPH-PMFVPWLVGPLLTGD----GVH 164 (329)
T ss_dssp -----EEHHHHCTTSCC-----CCSHHHHHHHHHHH----CCCSEEEECCTTEESCC-TTHHHHHHHHHHSCS----SCC
T ss_pred -----ccceeeeccCCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCcC-hHHHHHHHHHHHhCC----Ccc
Confidence 00011111 122 47899999999997 89999999999999 74 99999999885 555 467
Q ss_pred EEecC
Q 045732 324 FVQFP 328 (697)
Q Consensus 324 ~VQ~p 328 (697)
+|++.
T Consensus 165 ~v~g~ 169 (329)
T 3ckj_A 165 LVKSF 169 (329)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77664
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.52 E-value=3.1e-14 Score=165.67 Aligned_cols=228 Identities=15% Similarity=0.073 Sum_probs=144.2
Q ss_pred CCCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCce-EEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCC
Q 045732 88 EFPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKL-SVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETN 166 (697)
Q Consensus 88 ~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl-~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~ 166 (697)
.-|+|+|+||| ||++ ..+.+||.|++++.|+.++. +|+|+|||++|.+-
T Consensus 178 ~~pkVSVVIpt---YN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~-------------------------- 227 (657)
T 4fix_A 178 GTANIAVGIPT---FNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRD-------------------------- 227 (657)
T ss_dssp SCCCEEEECCB---SSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGG--------------------------
T ss_pred CCCeEEEEEEe---cCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccc--------------------------
Confidence 46899999999 9999 57789999999999965544 89999999997320
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCC
Q 045732 167 PETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDED 246 (697)
Q Consensus 167 p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~ 246 (697)
..+..+. .++.
T Consensus 228 ------------~~~~~e~---~~~~------------------------------------------------------ 238 (657)
T 4fix_A 228 ------------HPDFPAA---AARL------------------------------------------------------ 238 (657)
T ss_dssp ------------STTHHHH---HHHH------------------------------------------------------
T ss_pred ------------hHHHHHH---HHhc------------------------------------------------------
Confidence 0111111 1100
Q ss_pred CCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEe
Q 045732 247 TTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQ 326 (697)
Q Consensus 247 ~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ 326 (697)
.|++.++..+ | .|.|+|.|.|++.+....++|||+++|+|.++. |++|.+++.++.+.. ++++|+
T Consensus 239 -----~~~I~vI~~~-N-----~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~~---~~~~vg 303 (657)
T 4fix_A 239 -----GSRLSIHDQP-N-----LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFAK---APMLVG 303 (657)
T ss_dssp -----GGGEEEEECC-C-----CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHBS---SCCEEE
T ss_pred -----CCCEEEEECC-C-----CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhCC---CcEEEE
Confidence 1236666654 3 679999999999742112689999999999995 999999999887431 355554
Q ss_pred cCceeccCC-c----c---h--HH-----HHH-H-HHH----HH---HHHHHHh-hcCCeeeeeeeEeeehhhhcCCCCC
Q 045732 327 FPQRFRGLS-S----N---D--IY-----AAE-F-RRL----FF---VNLLGFD-GLKGATYVGTGTFFCRRALFGSPSN 381 (697)
Q Consensus 327 ~pq~f~n~~-~----~---d--~~-----~~~-~-~~f----~~---~~~~g~~-~~~~~~~~Gtg~~~RR~aL~~i~~~ 381 (697)
......+.. . . + .+ ... . ..| +. ......+ ........|+++++||+++.++
T Consensus 304 ~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~v--- 380 (657)
T 4fix_A 304 GQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEEL--- 380 (657)
T ss_dssp EEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHH---
T ss_pred eEEecCCCCceeeecccEeccccccccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHh---
Confidence 322111110 0 0 0 00 000 0 000 00 0001111 1223356788899999999886
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccccCccCC-CccchHHHHHHHHhCCcEEEEeCCCCCc
Q 045732 382 LISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKMGFRYG-SLTEDYYTGYRLHCEGWRSIYCTPDRPA 460 (697)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~gG~~~~-svtED~~t~~~l~~~Gwrsvy~~~~~~~ 460 (697)
||+... .-.||++.++|+..+||+++|+++. .
T Consensus 381 ---------------------------------------------Ggfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~a--~ 413 (657)
T 4fix_A 381 ---------------------------------------------GQPLPLFIKWDDADYGLRAAEHGYPTVTLPGA--A 413 (657)
T ss_dssp ---------------------------------------------CSCCSCSSSSHHHHHHHHHHHTTCCEEEEEEE--E
T ss_pred ---------------------------------------------CCChhHhccCcHHHHHHHHHHcCCeEEEECCE--E
Confidence 777532 3369999999999999999999874 2
Q ss_pred eeeec----C--CCHHHHHHHHHHH
Q 045732 461 FYGDA----P--ITLFDFINQYKRW 479 (697)
Q Consensus 461 ~~g~a----P--~tl~~~l~Qr~RW 479 (697)
++=.. + ..++.|+..|.|+
T Consensus 414 V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 414 IWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp EEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred EEEcCcCccccccHHHHHHHHHHHH
Confidence 33111 1 1257777777775
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.51 E-value=1.1e-15 Score=179.96 Aligned_cols=193 Identities=13% Similarity=0.066 Sum_probs=0.0
Q ss_pred CceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccCCccc
Q 045732 90 PALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLETNPET 169 (697)
Q Consensus 90 P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~~p~~ 169 (697)
|.|+|+||| ||++ ..+.+||.|+++++||+ ++|+|+|||++|.|.+.+.+..
T Consensus 2 p~vSVIIp~---yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~---------------------- 53 (729)
T 3l7i_A 2 NKLTIIVTY---YNAE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAI---------------------- 53 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEc---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHH----------------------
Confidence 789999999 9999 67889999999999995 8999999999997732222210
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCCCCCC
Q 045732 170 YFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDEDTTG 249 (697)
Q Consensus 170 yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~~~~~ 249 (697)
+.|
T Consensus 54 -----------------~~~------------------------------------------------------------ 56 (729)
T 3l7i_A 54 -----------------KDY------------------------------------------------------------ 56 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------HhC------------------------------------------------------------
Confidence 000
Q ss_pred CCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCc
Q 045732 250 HFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQ 329 (697)
Q Consensus 250 ~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq 329 (697)
-+++.++..++| .|+++|.|.|++. ++||+|+++|+|.++. |++|.+++..+.++ ++.+... .
T Consensus 57 --~~~i~~i~~~~n-----~G~~~arN~gi~~----A~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~----d~v~~~~-~ 119 (729)
T 3l7i_A 57 --DKNIRFIDLDEN-----SGHAHARNIALEE----VETPYFMFLDADDELA-SYAITFYLEKFNNT----DGLIAPI-H 119 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --CCCEEEEECCCC-----CCHHHHHHHHHHh----ccCCEEEEECCCCCCC-hhHHHHHHHHhcCC----CEEEEee-E
Confidence 013556665553 6799999999997 8999999999999995 99999999988844 2333222 1
Q ss_pred eeccCCcchHHHHHHHHHHHHHHHHHhhcCCe--eeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHh
Q 045732 330 RFRGLSSNDIYAAEFRRLFFVNLLGFDGLKGA--TYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILS 407 (697)
Q Consensus 330 ~f~n~~~~d~~~~~~~~f~~~~~~g~~~~~~~--~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (697)
.+.+ ... ............ ..+....... ...|.+.++||+++.++
T Consensus 120 ~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l~~~----------------------------- 167 (729)
T 3l7i_A 120 SFTT-QRP-QFVDLDRVRVEY-FNAKENINSFLRKQSACNIIFRTAIVRAH----------------------------- 167 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred Eeec-CCC-ccccccceeeee-ecchhhHHHHhhccchhheeeeHHHHHHc-----------------------------
Confidence 1211 111 000000000000 0111111111 23456778999999876
Q ss_pred hhcccccccccccccccccc-CccCC-CccchHHHHHHHHhCCcEEEEeC
Q 045732 408 LAHHVASCNYENRTNWGSKM-GFRYG-SLTEDYYTGYRLHCEGWRSIYCT 455 (697)
Q Consensus 408 ~~~~~~~~~ye~~t~wg~~g-G~~~~-svtED~~t~~~l~~~Gwrsvy~~ 455 (697)
| ||+.+ ...||.+..+++..+|+++.|++
T Consensus 168 -------------------gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~ 198 (729)
T 3l7i_A 168 -------------------HIRFNENLNTYVDWSFVLEYMKYVNKFVRIF 198 (729)
T ss_dssp --------------------------------------------------
T ss_pred -------------------CCCcCCCCCcccCHHHHHHHHHhcCCEEEec
Confidence 6 78876 47999999999999999999993
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.42 E-value=2.4e-13 Score=143.02 Aligned_cols=135 Identities=15% Similarity=0.068 Sum_probs=89.9
Q ss_pred hHHHHHHHH----HhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHH
Q 045732 271 KAGALNAML----RVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRR 346 (697)
Q Consensus 271 KAGaLN~al----~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~ 346 (697)
||.++|.|+ +. ++||||+++|+|.++. |+.+. +... ..|..+.. ..+.++
T Consensus 113 ~a~a~N~G~~~al~~----A~gd~i~flD~D~i~~-~d~~~-----~~~~---------~~p~~~~~--~~~~~~----- 166 (287)
T 2fy7_A 113 RAKLLNVGFQEALKD----YDYTCFVFSDVDLIPM-NDHNA-----YRCF---------SQPRHISV--AMDKFG----- 166 (287)
T ss_dssp HHHHHHHHHHHHHHH----SCCCEEEEECTTEEES-BTTSC-----CSCC---------SSCEECCC--EEGGGT-----
T ss_pred hhhhhhhHHHHHHHh----CCCCEEEEECCCcccC-CCcce-----EecC---------CCCceEEE--eecccc-----
Confidence 777888888 65 8999999999999995 88521 1100 11211110 001100
Q ss_pred HHHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhccccccccccccccccc
Q 045732 347 LFFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSK 426 (697)
Q Consensus 347 f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~ 426 (697)
+ ...+ ..+.|.+.++||+++.++
T Consensus 167 -~------~~~~--~~~~G~~~~~rr~~f~~v------------------------------------------------ 189 (287)
T 2fy7_A 167 -F------SLPY--VQYFGGVSALSKQQFLTI------------------------------------------------ 189 (287)
T ss_dssp -T------SCSS--TTCCCSEEEEEHHHHHHT------------------------------------------------
T ss_pred -c------CCCc--CceeeeEEEEEHHHHHHc------------------------------------------------
Confidence 0 0001 235677888999999887
Q ss_pred cCccCCCc---cchHHHHHHHHhCCcEEEEeCCCCCce----------eeecCCCHHHHHHHHHHHccCcchhhh
Q 045732 427 MGFRYGSL---TEDYYTGYRLHCEGWRSIYCTPDRPAF----------YGDAPITLFDFINQYKRWAIGGLQMAF 488 (697)
Q Consensus 427 gG~~~~sv---tED~~t~~~l~~~Gwrsvy~~~~~~~~----------~g~aP~tl~~~l~Qr~RWa~G~lqi~~ 488 (697)
|||++.-. .||.+++.|++.+||++.+.++..... ....|+.++.+.+||.||+++.+..+.
T Consensus 190 gGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~~ 264 (287)
T 2fy7_A 190 NGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLT 264 (287)
T ss_dssp TSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGCC
T ss_pred CCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccCc
Confidence 89987643 599999999999999887443211111 235789999999999999999998863
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.34 E-value=6.4e-12 Score=137.40 Aligned_cols=121 Identities=21% Similarity=0.126 Sum_probs=87.8
Q ss_pred CCCceeEEeccCCCCCCchHHHHHHHHHHHc--CCCCCCceEEEEecCCCCchhhHhHHHHHHhhhhccccccccCcccC
Q 045732 88 EFPALDVFVCTADPYKEPPINVVNTALSVMA--FDYPTDKLSVYVSDDGGCAATLFGFVEAAKFARHWLPFCRKNNVLET 165 (697)
Q Consensus 88 ~~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~--~dYP~~kl~v~v~DDg~~~~T~~~l~ea~~fa~~w~pfc~k~~v~~~ 165 (697)
..|.|+|+||| |||+ ..+.++|.++.+ .+||.+ .+|+|+||||+|.|.+.+.+. ..
T Consensus 92 ~~p~vSVVIP~---yNe~-~~l~~~l~sl~~~l~~~~~~-~EIIVVDDgStD~T~~i~~~~---~~-------------- 149 (387)
T 3f1y_A 92 LGLTVSAVLPS---RNVA-DTVGGIIDEIHALNERAPLI-DQILVVDADSEDGTAGVAASH---GA-------------- 149 (387)
T ss_dssp HTCCEEEEEEE---SSCT-TTHHHHHHHHHHHHHHSCCC-SEEEEEECSCSSSHHHHHHHT---TC--------------
T ss_pred CCCeEEEEEEc---CCCH-HHHHHHHHHHHHHHhcCCCC-eEEEEEcCcCCccHHHHHHHh---Cc--------------
Confidence 47999999999 9998 567899999987 478754 689999999999884333221 00
Q ss_pred CcccccccccccCChhHHHHHHHHHHHHHHHhhhhccCccccccccchhhhhhhccccCCCCcCCCccceeEeecCCCCC
Q 045732 166 NPETYFSLNHAACCPETQQIEMMYRNMKVRVADVVNTGKVSDEYITSDQEREAFNKWTDNFSRYDHPAVIQVLIDNGKDE 245 (697)
Q Consensus 166 ~p~~yf~~~~~~~~~e~~~~~~~y~~l~~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~h~~~~~v~~~~~~~~ 245 (697)
+ ++.
T Consensus 150 --------------------------------------~--------------------------------v~~------ 153 (387)
T 3f1y_A 150 --------------------------------------E--------------------------------VYS------ 153 (387)
T ss_dssp --------------------------------------E--------------------------------EEE------
T ss_pred --------------------------------------h--------------------------------hcc------
Confidence 0 000
Q ss_pred CCCCCCcCeEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEeCCCCC-CCCCcHHHHHHHHhc-CCCCCCcEE
Q 045732 246 DTTGHFLPNLIYVSREKSKSCPSHFKAGALNAMLRVSATMTNAPIILTLDCDTS-SNDPQTPLRVLCYVS-NPVTRSNLS 323 (697)
Q Consensus 246 ~~~~~~~p~l~yv~R~k~~~~~~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~-~~~p~~L~~~v~~f~-dp~~~~~v~ 323 (697)
+.++++.+++ +.||++|+|.|++. ++||+|+++|||.. ++ |+.|.+++..+. +| +++
T Consensus 154 -------~~~~~i~~~~-----n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~~p----~~d 212 (387)
T 3f1y_A 154 -------ENELMSGYGD-----AHGKGDAMWRALSV----TRGDLVLYIDADTRDFR-PQLAYGVLGPVLEVP----GVR 212 (387)
T ss_dssp -------GGGTTGGGCS-----CCSHHHHHHHHTTT----CCSSEEEECCTTCSSCC-THHHHTTHHHHHHST----TCC
T ss_pred -------cceeEecCCc-----cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcCC-HHHHHHHHHHHHHCC----Cce
Confidence 0001112222 47899999999997 79999999999999 75 999999998875 45 355
Q ss_pred EEec
Q 045732 324 FVQF 327 (697)
Q Consensus 324 ~VQ~ 327 (697)
+|.+
T Consensus 213 ~v~G 216 (387)
T 3f1y_A 213 FVKA 216 (387)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5654
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.13 E-value=4.4e-10 Score=114.94 Aligned_cols=47 Identities=9% Similarity=-0.005 Sum_probs=40.1
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC-----CCCCCcEEEEe
Q 045732 271 KAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN-----PVTRSNLSFVQ 326 (697)
Q Consensus 271 KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d-----p~~~~~v~~VQ 326 (697)
.|.|+|.|++. ++|||++++|+|++++ |++|.+++..+.+ | ++|+|.
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~~-~~~l~~l~~~~~~~~~~~~----~vg~vg 113 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVELV-DRGYDDLVAAIEALEEADP----KWLVAG 113 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEECS-SCCHHHHHHHHHHHHHHCT----TEEEEE
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhcccCCC----CeeEEe
Confidence 46789999997 8999999999999995 9999999998874 5 577663
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.67 E-value=1.4e-07 Score=103.42 Aligned_cols=43 Identities=19% Similarity=0.043 Sum_probs=36.9
Q ss_pred CCChHHHHHHHH----HhcccCCCCCEEEEeCCCCC-CCCCcHHHHHHHHhcC
Q 045732 268 SHFKAGALNAML----RVSATMTNAPIILTLDCDTS-SNDPQTPLRVLCYVSN 315 (697)
Q Consensus 268 ~~~KAGaLN~al----~~~~~~s~ge~Il~lDAD~~-~~~p~~L~~~v~~f~d 315 (697)
+.||++|+|.|+ +. ++||+|+++|||.. .+ |+.+.+++....+
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~~ 120 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAADF 120 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHHc
Confidence 378999999999 65 78999999999996 54 9999999887753
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.84 E-value=1.6e-05 Score=85.37 Aligned_cols=46 Identities=15% Similarity=0.275 Sum_probs=39.8
Q ss_pred CCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchh
Q 045732 89 FPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAAT 139 (697)
Q Consensus 89 ~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T 139 (697)
++.+.|+|+| ||=| + +.+|+.++++++.+.++..|+|+|||+.+.|
T Consensus 1 ~~~~pViI~~---yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 1 LAVIPILVIA---CDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CCCCCEEEEE---SSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred CCcccEEEEE---CCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 4568899999 9999 6 8999999999997777788999999987643
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=97.83 E-value=8.4e-05 Score=79.25 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=36.7
Q ss_pred CCceeEEeccCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEecCCCCchh
Q 045732 89 FPALDVFVCTADPYKEPPINVVNTALSVMAFDYPTDKLSVYVSDDGGCAAT 139 (697)
Q Consensus 89 ~P~VdV~V~t~~p~nE~~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T 139 (697)
...++|+||+ |||+. +++.+++++-+.. .+|+|+|||+.|.|
T Consensus 52 ~~klSIVVPv---YNEe~----~lLesVl~qi~~d--~eIIlVdDGS~D~s 93 (391)
T 2wvl_A 52 LEQTAIVVPT---RNERL----KLLEGVLSGIPHE--ALILVASNSSPDRF 93 (391)
T ss_dssp HTTEEEEEEE---SSCCH----HHHHHHHHTSCTT--SEEEEEECCCHHHH
T ss_pred HhceEEEEec---cCcHH----HHHHHHHhcCCCC--ceEEEEECCCCCCh
Confidence 6789999999 99995 4688899988774 88999999999876
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=97.82 E-value=4.9e-05 Score=82.62 Aligned_cols=39 Identities=15% Similarity=0.010 Sum_probs=32.6
Q ss_pred CCChHHHHHHHHHhcccCC---CCCEEEEeCCCCCCCCCcHHHHHHHH
Q 045732 268 SHFKAGALNAMLRVSATMT---NAPIILTLDCDTSSNDPQTPLRVLCY 312 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s---~ge~Il~lDAD~~~~~p~~L~~~v~~ 312 (697)
+.||..||-.++.. + ++|+|+++|||-+ .|..+.+.+.-
T Consensus 142 r~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~--iP~~v~~~~kg 183 (394)
T 2zu9_A 142 RSGKGEGMLVGLLL----AKAIGAEYVGFVDADNY--IPGAVNEYVKD 183 (394)
T ss_dssp CCSHHHHHHHHHHH----HHHTTCSEEEECCSCBS--CHHHHHHHHHH
T ss_pred cCChHHHHHHHHHH----HhhCCCCEEEEEeCCCC--CHHHHHHHHHH
Confidence 35999999999997 5 8999999999995 38888776543
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=81.52 E-value=2.9 Score=43.15 Aligned_cols=140 Identities=16% Similarity=0.009 Sum_probs=85.5
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCCCCCcEEEEecCceeccCCcchHHHHHHHHH
Q 045732 268 SHFKAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSNPVTRSNLSFVQFPQRFRGLSSNDIYAAEFRRL 347 (697)
Q Consensus 268 ~~~KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f 347 (697)
.-.||..||.|...+. .+.|++++-|.|.+|.| |... |-.++. ..|.... .+... +
T Consensus 96 ~FNRa~LlNvGf~ea~--~~~d~~ifHDVDLlP~d-d~n~----Y~c~~~--------~~P~Hls-~~~~~-~------- 151 (287)
T 3lw6_A 96 RFNRASLINVGFQFAS--DVYDYIAMHDVDLLPLN-DNLL----YEYPSS--------LGPLHIA-GPKLH-P------- 151 (287)
T ss_dssp CCCHHHHHHHHHHHSC--TTCCEEEEECTTEEECC-TTSC----CCCCCT--------TCCEESS-CTTTC-S-------
T ss_pred ccchhheecccHHHHh--ccCCEEEEecccccccC-CCcc----ccCCCC--------CCceEEe-ecccc-C-------
Confidence 5679999999998742 45799999999999964 3211 211110 1222221 11100 0
Q ss_pred HHHHHHHHhhcCCeeeeeeeEeeehhhhcCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhcccccccccccccccccc
Q 045732 348 FFVNLLGFDGLKGATYVGTGTFFCRRALFGSPSNLISPEIPELHPNYAVDEPIQSPSILSLAHHVASCNYENRTNWGSKM 427 (697)
Q Consensus 348 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ye~~t~wg~~g 427 (697)
...-..+.|....++|+.+.++ +
T Consensus 152 ---------~~~Y~~~~GGv~a~~re~f~kV------------------------------------------------N 174 (287)
T 3lw6_A 152 ---------KYHYDNFVGGILLVRREHFKQM------------------------------------------------N 174 (287)
T ss_dssp ---------SCCCTTCCCSEEEEEHHHHHHT------------------------------------------------T
T ss_pred ---------CCCcCCccccEEeccHHHHHHc------------------------------------------------C
Confidence 0111235566777888888776 5
Q ss_pred CccCCC---ccchHHHHHHHHhCCcEEEEeCCC---C-Ccee---------eecCCCHHHHHHHHHHHccCcchhhh
Q 045732 428 GFRYGS---LTEDYYTGYRLHCEGWRSIYCTPD---R-PAFY---------GDAPITLFDFINQYKRWAIGGLQMAF 488 (697)
Q Consensus 428 G~~~~s---vtED~~t~~~l~~~Gwrsvy~~~~---~-~~~~---------g~aP~tl~~~l~Qr~RWa~G~lqi~~ 488 (697)
||+..- =.||.+...|+...|.++.-.+.. + ..+. ...|......-.+++||..+.+..+.
T Consensus 175 GFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl~ 251 (287)
T 3lw6_A 175 GMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVK 251 (287)
T ss_dssp SCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGCC
T ss_pred CCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeeeE
Confidence 555422 269999999999999987654320 0 0111 12345566677899999999988773
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=64.01 E-value=11 Score=36.77 Aligned_cols=25 Identities=20% Similarity=0.048 Sum_probs=21.5
Q ss_pred CCCCEEEEeCCC---CCCCCCcHHHHHHH
Q 045732 286 TNAPIILTLDCD---TSSNDPQTPLRVLC 311 (697)
Q Consensus 286 s~ge~Il~lDAD---~~~~~p~~L~~~v~ 311 (697)
.++++++++||| .-- +|+.+.+++.
T Consensus 52 ~~~dhllfIDAD~~~I~F-dPe~V~rLl~ 79 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEI-DFQKVEAKFN 79 (203)
T ss_dssp TTCCEEEEECTTEEEEEC-CHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcccc-CHHHHHHHHh
Confidence 678999999999 776 4999988873
No 21
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=39.45 E-value=21 Score=36.44 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=24.9
Q ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHhcCCC
Q 045732 286 TNAPIILTLDCDTSSNDPQTPLRVLCYVSNPV 317 (697)
Q Consensus 286 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~dp~ 317 (697)
.+.+.++..|.|++++ .+-|.+.+..+ |++
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC-CCC
Confidence 5899999999999995 88888887655 553
No 22
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=37.99 E-value=61 Score=31.90 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=31.9
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEeCCCCCCCCCcHHHHHHHHhcC
Q 045732 271 KAGALNAMLRVSATMTNAPIILTLDCDTSSNDPQTPLRVLCYVSN 315 (697)
Q Consensus 271 KAGaLN~al~~~~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~d 315 (697)
...++-+|++......+.++++++|||+=.-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 456777788763210125899999999754458999999988765
No 23
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=24.07 E-value=1.1e+02 Score=28.71 Aligned_cols=41 Identities=12% Similarity=0.006 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEeCCCC-CCCCCcHHHHHHHHh
Q 045732 269 HFKAGALNAMLRVSATMTNAPIILTLDCDT-SSNDPQTPLRVLCYV 313 (697)
Q Consensus 269 ~~KAGaLN~al~~~~~~s~ge~Il~lDAD~-~~~~p~~L~~~v~~f 313 (697)
.|-++++..|++.. .+.+.+++++||+ .+ +++.+++++..+
T Consensus 71 ~G~~~si~~al~~~---~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 112 (197)
T 3d5n_A 71 EGISTSLKLGLRFF---KDYDAVLVALGDMPFV-TKEDVNKIINTF 112 (197)
T ss_dssp GCHHHHHHHHHHHT---TTSSEEEEEETTCCCS-CHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhh---ccCCcEEEEeCCcccc-CHHHHHHHHHHh
Confidence 35678888888863 2348999999999 55 489999988866
No 24
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=21.58 E-value=1.4e+02 Score=28.06 Aligned_cols=40 Identities=18% Similarity=0.245 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHhcccCCCCCEEEEeCCCC-CCCCCcHHHHHHHHh
Q 045732 270 FKAGALNAMLRVSATMTNAPIILTLDCDT-SSNDPQTPLRVLCYV 313 (697)
Q Consensus 270 ~KAGaLN~al~~~~~~s~ge~Il~lDAD~-~~~~p~~L~~~v~~f 313 (697)
+.++++..|++.. .+.+.+++++||+ .+ +++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~-~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALT-PPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccC-CHHHHHHHHHHH
Confidence 3688899999862 2578999999999 45 488999999877
Done!