Query 045735
Match_columns 378
No_of_seqs 140 out of 1635
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 08:21:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 2.1E-11 7.1E-16 80.5 2.7 45 8-52 6-50 (53)
2 2e31_A FBS1, F-box only protei 99.1 3.9E-11 1.3E-15 107.3 3.7 48 11-58 51-99 (297)
3 1zgk_A Kelch-like ECH-associat 99.1 1.3E-07 4.5E-12 86.1 26.2 208 108-341 65-295 (308)
4 4asc_A Kelch repeat and BTB do 99.1 6.6E-08 2.3E-12 88.3 24.1 194 124-340 69-284 (315)
5 2woz_A Kelch repeat and BTB do 99.0 8.5E-08 2.9E-12 87.7 24.4 208 108-339 51-293 (318)
6 3ii7_A Kelch-like protein 7; p 99.0 1E-07 3.4E-12 86.6 22.4 209 108-341 50-280 (306)
7 2vpj_A Kelch-like protein 12; 99.0 1.7E-07 5.9E-12 84.8 23.7 208 108-341 57-286 (301)
8 2xn4_A Kelch-like protein 2; s 98.9 2.2E-07 7.5E-12 84.2 22.8 207 108-340 56-283 (302)
9 2vpj_A Kelch-like protein 12; 98.8 7.7E-07 2.6E-11 80.5 22.4 193 123-341 32-239 (301)
10 2xn4_A Kelch-like protein 2; s 98.8 8.9E-07 3E-11 80.1 22.1 193 123-341 31-237 (302)
11 3ii7_A Kelch-like protein 7; p 98.8 6.4E-07 2.2E-11 81.3 20.5 193 122-341 24-233 (306)
12 2uvk_A YJHT; unknown function, 98.8 8.8E-07 3E-11 82.2 21.8 217 108-341 14-302 (357)
13 1zgk_A Kelch-like ECH-associat 98.8 6.1E-07 2.1E-11 81.6 19.9 197 123-341 40-248 (308)
14 4asc_A Kelch repeat and BTB do 98.7 5E-06 1.7E-10 75.7 23.2 206 116-341 7-229 (315)
15 3v7d_B Cell division control p 98.6 3.4E-05 1.2E-09 73.7 28.1 43 11-53 15-58 (464)
16 2woz_A Kelch repeat and BTB do 98.6 4.4E-06 1.5E-10 76.2 20.2 209 113-341 15-239 (318)
17 2ovr_B FBW7, F-BOX/WD repeat p 98.6 7.5E-06 2.6E-10 78.0 22.7 280 11-337 19-312 (445)
18 2uvk_A YJHT; unknown function, 98.5 1.6E-05 5.4E-10 73.6 20.7 150 186-340 167-349 (357)
19 2zwa_A Leucine carboxyl methyl 98.4 1.7E-05 5.8E-10 80.4 20.4 212 112-341 396-643 (695)
20 1p22_A F-BOX/WD-repeat protein 98.4 9.2E-06 3.1E-10 77.3 17.1 45 11-55 11-59 (435)
21 3l2o_B F-box only protein 4; s 98.0 1.3E-06 4.4E-11 77.3 1.6 48 11-58 5-52 (312)
22 1k3i_A Galactose oxidase precu 97.7 0.00053 1.8E-08 69.0 14.5 204 113-340 197-448 (656)
23 2ast_B S-phase kinase-associat 97.6 1.7E-05 5.8E-10 72.7 1.9 42 9-50 7-48 (336)
24 1k3i_A Galactose oxidase precu 97.5 0.00071 2.4E-08 68.0 12.4 213 110-340 250-504 (656)
25 2zwa_A Leucine carboxyl methyl 97.4 0.0013 4.3E-08 66.7 13.3 152 186-341 411-591 (695)
26 2p1m_B Transport inhibitor res 97.1 0.00011 3.9E-09 72.6 1.4 35 10-44 5-40 (594)
27 3ogk_B Coronatine-insensitive 96.4 0.00068 2.3E-08 67.0 1.0 34 11-44 13-47 (592)
28 2z2n_A Virginiamycin B lyase; 95.1 1.5 5.2E-05 37.8 17.4 191 108-337 104-299 (299)
29 3jrp_A Fusion protein of prote 93.6 3.8 0.00013 36.5 18.2 138 187-334 79-241 (379)
30 4gga_A P55CDC, cell division c 93.2 5.1 0.00017 36.9 19.4 200 108-339 110-316 (420)
31 3jro_A Fusion protein of prote 92.1 6.3 0.00021 39.8 17.6 139 186-335 76-240 (753)
32 1q7f_A NHL, brain tumor CG1071 89.3 9.6 0.00033 32.6 20.7 189 111-334 86-281 (286)
33 3scy_A Hypothetical bacterial 88.7 9.6 0.00033 33.9 14.2 113 222-340 221-346 (361)
34 4aez_A CDC20, WD repeat-contai 88.2 15 0.0005 33.4 21.6 190 112-338 103-298 (401)
35 3q7m_A Lipoprotein YFGL, BAMB; 87.4 16 0.00054 32.8 14.9 111 217-339 48-168 (376)
36 4gqb_B Methylosome protein 50; 85.8 19 0.00064 32.2 16.3 197 111-339 91-295 (344)
37 2qc5_A Streptogramin B lactona 85.8 8.5 0.00029 32.9 11.6 110 217-339 23-139 (300)
38 3ei3_B DNA damage-binding prot 85.2 20 0.0007 31.9 17.5 183 122-335 96-284 (383)
39 3hfq_A Uncharacterized protein 85.0 14 0.00047 32.6 12.9 103 236-339 18-124 (347)
40 1q7f_A NHL, brain tumor CG1071 84.0 19 0.00065 30.6 19.5 203 108-341 35-246 (286)
41 1k8k_C P40, ARP2/3 complex 41 83.7 6.8 0.00023 34.7 10.2 96 237-335 31-129 (372)
42 3hfq_A Uncharacterized protein 83.5 23 0.00077 31.1 16.3 73 268-341 250-327 (347)
43 3dsm_A Uncharacterized protein 83.5 23 0.00079 31.2 16.0 138 186-338 63-217 (328)
44 3e5z_A Putative gluconolactona 82.8 22 0.00075 30.5 18.8 186 122-341 50-254 (296)
45 3k26_A Polycomb protein EED; W 81.9 25 0.00087 30.6 14.1 63 269-333 299-366 (366)
46 2qc5_A Streptogramin B lactona 81.4 24 0.00081 29.9 16.7 190 108-339 25-223 (300)
47 3jrp_A Fusion protein of prote 81.0 27 0.00091 30.7 13.2 95 237-335 34-136 (379)
48 2z2n_A Virginiamycin B lyase; 80.6 20 0.00069 30.4 11.9 108 222-341 151-262 (299)
49 2dg1_A DRP35, lactonase; beta 79.0 14 0.00048 32.3 10.5 112 222-339 55-177 (333)
50 3v65_B Low-density lipoprotein 78.8 38 0.0013 30.8 16.4 187 113-339 87-283 (386)
51 3dwl_C Actin-related protein 2 78.8 22 0.00074 31.6 11.8 182 122-336 33-239 (377)
52 3g4e_A Regucalcin; six bladed 78.7 30 0.001 29.8 12.5 102 222-334 24-140 (297)
53 4e54_B DNA damage-binding prot 77.4 43 0.0015 30.6 16.3 58 279-338 376-435 (435)
54 3f3f_A Nucleoporin SEH1; struc 77.3 34 0.0012 29.3 12.9 65 269-335 71-145 (351)
55 2ojh_A Uncharacterized protein 76.0 33 0.0011 28.6 17.8 198 111-340 50-265 (297)
56 3hrp_A Uncharacterized protein 75.8 40 0.0014 31.0 12.9 115 217-339 134-255 (409)
57 1gxr_A ESG1, transducin-like e 75.3 38 0.0013 29.0 14.4 69 268-338 108-177 (337)
58 4e54_B DNA damage-binding prot 74.7 13 0.00046 34.2 9.4 188 115-335 134-329 (435)
59 3q7m_A Lipoprotein YFGL, BAMB; 74.1 48 0.0016 29.5 14.1 109 217-339 98-213 (376)
60 1k8k_C P40, ARP2/3 complex 41 74.0 31 0.001 30.3 11.4 70 268-339 19-89 (372)
61 3mkq_A Coatomer beta'-subunit; 73.9 74 0.0025 31.6 20.8 188 111-338 64-264 (814)
62 3mmy_A MRNA export factor; mRN 73.4 45 0.0015 28.9 12.7 71 269-341 54-125 (368)
63 2ghs_A AGR_C_1268P; regucalcin 72.2 50 0.0017 28.9 12.7 104 222-339 60-174 (326)
64 3fm0_A Protein CIAO1; WDR39,SG 70.9 55 0.0019 28.8 12.4 98 237-337 84-185 (345)
65 3g4e_A Regucalcin; six bladed 70.8 50 0.0017 28.3 20.1 204 110-351 21-248 (297)
66 3mbr_X Glutamine cyclotransfer 69.9 51 0.0017 28.0 15.0 113 219-341 27-142 (243)
67 3v64_C Agrin; beta propeller, 69.6 61 0.0021 28.9 16.4 187 113-339 44-240 (349)
68 1l0q_A Surface layer protein; 69.3 61 0.0021 28.7 16.9 177 123-339 13-195 (391)
69 3jro_A Fusion protein of prote 69.1 51 0.0017 33.0 12.8 95 237-334 32-133 (753)
70 3e5z_A Putative gluconolactona 68.5 37 0.0013 29.0 10.3 108 222-339 38-167 (296)
71 3nol_A Glutamine cyclotransfer 67.7 60 0.002 28.0 13.7 112 220-341 50-164 (262)
72 3fm0_A Protein CIAO1; WDR39,SG 65.7 70 0.0024 28.0 17.8 62 268-331 161-223 (345)
73 3zwl_B Eukaryotic translation 65.6 67 0.0023 27.8 20.3 69 268-339 186-255 (369)
74 1npe_A Nidogen, entactin; glyc 65.3 60 0.0021 27.2 20.7 194 109-340 43-246 (267)
75 2fp8_A Strictosidine synthase; 65.3 51 0.0018 28.6 10.8 115 217-339 22-180 (322)
76 3sjl_D Methylamine dehydrogena 65.2 81 0.0028 28.8 12.2 110 222-337 237-367 (386)
77 3u4y_A Uncharacterized protein 64.7 68 0.0023 27.5 17.2 187 113-336 9-210 (331)
78 4ggc_A P55CDC, cell division c 64.4 65 0.0022 27.2 18.7 30 108-138 30-60 (318)
79 1r5m_A SIR4-interacting protei 63.9 78 0.0027 28.0 15.9 185 111-333 215-425 (425)
80 1rwi_B Serine/threonine-protei 63.4 30 0.001 28.9 8.5 111 217-339 70-186 (270)
81 3dwl_C Actin-related protein 2 61.9 7 0.00024 34.9 4.3 97 237-335 34-133 (377)
82 1kv9_A Type II quinohemoprotei 61.3 90 0.0031 30.8 12.6 110 217-339 61-193 (668)
83 1jmx_B Amine dehydrogenase; ox 61.2 62 0.0021 27.9 10.5 108 222-335 10-136 (349)
84 2pm7_B Protein transport prote 60.9 60 0.002 27.7 10.2 64 269-334 67-133 (297)
85 2mad_H Methylamine dehydrogena 60.2 97 0.0033 27.9 12.2 56 283-339 298-356 (373)
86 3m0c_C LDL receptor, low-densi 59.8 1.5E+02 0.0052 30.0 19.4 155 186-355 492-656 (791)
87 3i2n_A WD repeat-containing pr 59.4 86 0.0029 27.0 15.6 106 222-335 128-245 (357)
88 1ri6_A Putative isomerase YBHE 59.3 84 0.0029 26.8 16.5 115 222-341 188-318 (343)
89 1rwi_B Serine/threonine-protei 59.2 75 0.0026 26.2 17.8 187 108-335 72-266 (270)
90 3k26_A Polycomb protein EED; W 58.8 26 0.0009 30.5 7.6 102 223-335 85-194 (366)
91 2iwa_A Glutamine cyclotransfer 58.6 88 0.003 26.9 14.5 109 223-340 32-143 (266)
92 2ad6_A Methanol dehydrogenase 58.3 1E+02 0.0035 29.7 12.2 111 217-339 57-191 (571)
93 3f3f_A Nucleoporin SEH1; struc 57.9 76 0.0026 26.9 10.5 65 268-334 22-91 (351)
94 4a11_B DNA excision repair pro 57.7 99 0.0034 27.2 18.9 107 222-336 256-368 (408)
95 1pjx_A Dfpase, DIISOPROPYLFLUO 57.7 87 0.003 26.5 19.0 191 122-340 46-264 (314)
96 2p4o_A Hypothetical protein; p 57.6 92 0.0032 26.8 11.7 104 222-335 42-149 (306)
97 3dr2_A Exported gluconolactona 57.4 34 0.0012 29.6 7.9 109 222-340 55-185 (305)
98 3bws_A Protein LP49; two-domai 57.2 1.1E+02 0.0037 27.4 12.3 141 187-339 144-298 (433)
99 1ri6_A Putative isomerase YBHE 57.2 91 0.0031 26.6 12.4 111 222-339 48-167 (343)
100 3lrv_A PRE-mRNA-splicing facto 56.6 63 0.0021 28.2 9.8 94 237-335 150-246 (343)
101 3fvz_A Peptidyl-glycine alpha- 56.2 1E+02 0.0035 26.8 15.0 205 111-334 99-323 (329)
102 1kb0_A Quinohemoprotein alcoho 55.7 70 0.0024 31.7 10.7 111 217-339 72-205 (677)
103 3fvz_A Peptidyl-glycine alpha- 55.6 1E+02 0.0035 26.7 17.7 190 123-339 70-283 (329)
104 3vgz_A Uncharacterized protein 55.6 1E+02 0.0034 26.6 13.4 114 221-339 98-221 (353)
105 1nir_A Nitrite reductase; hemo 55.2 1E+02 0.0034 29.5 11.5 112 222-336 334-461 (543)
106 4a2l_A BT_4663, two-component 55.1 1.7E+02 0.0059 29.2 18.5 198 108-340 93-298 (795)
107 3vgz_A Uncharacterized protein 54.2 1.1E+02 0.0036 26.4 24.7 206 109-339 96-309 (353)
108 3nok_A Glutaminyl cyclase; bet 53.8 1.1E+02 0.0037 26.4 11.4 108 221-341 63-173 (268)
109 1ijq_A LDL receptor, low-densi 53.6 1.1E+02 0.0038 26.5 17.3 185 115-340 3-202 (316)
110 1yiq_A Quinohemoprotein alcoho 53.4 1.2E+02 0.004 30.1 11.9 113 217-339 65-198 (689)
111 1sq9_A Antiviral protein SKI8; 53.0 1.2E+02 0.0041 26.7 11.4 110 222-335 244-397 (397)
112 2aq5_A Coronin-1A; WD40 repeat 52.6 1.3E+02 0.0043 26.8 18.3 145 187-341 154-309 (402)
113 3mmy_A MRNA export factor; mRN 52.5 1.1E+02 0.0038 26.2 18.1 29 309-337 279-308 (368)
114 3sfz_A APAF-1, apoptotic pepti 52.4 80 0.0027 33.4 11.2 133 186-336 1024-1161(1249)
115 3v7d_B Cell division control p 52.1 1.4E+02 0.0047 27.1 15.2 93 237-338 333-426 (464)
116 1gxr_A ESG1, transducin-like e 52.1 1.1E+02 0.0037 25.9 21.2 195 111-339 60-261 (337)
117 3tc9_A Hypothetical hydrolase; 51.9 1.5E+02 0.005 27.3 13.1 114 216-339 139-263 (430)
118 3bws_A Protein LP49; two-domai 51.7 1.3E+02 0.0045 26.8 12.7 110 222-338 133-248 (433)
119 3v65_B Low-density lipoprotein 51.7 1.4E+02 0.0047 27.0 15.4 207 110-355 124-342 (386)
120 3nol_A Glutamine cyclotransfer 51.6 1.2E+02 0.004 26.1 14.0 138 186-341 64-210 (262)
121 1evh_A WH1 domain, protein (ME 51.2 17 0.00057 27.0 4.0 41 123-173 12-52 (112)
122 3m0c_C LDL receptor, low-densi 50.8 2.1E+02 0.0072 28.9 17.5 114 217-341 474-597 (791)
123 3odt_A Protein DOA1; ubiquitin 50.1 1.1E+02 0.0038 25.5 22.0 111 217-338 108-219 (313)
124 3o4h_A Acylamino-acid-releasin 50.1 1.7E+02 0.0059 27.7 14.3 185 114-339 123-320 (582)
125 1npe_A Nidogen, entactin; glyc 49.8 1.1E+02 0.0038 25.4 15.4 139 186-339 57-204 (267)
126 3ow8_A WD repeat-containing pr 49.8 1.3E+02 0.0043 26.0 13.5 95 237-338 187-284 (321)
127 4hw6_A Hypothetical protein, I 49.4 1.3E+02 0.0046 27.6 11.0 111 216-336 141-262 (433)
128 2pm9_A Protein WEB1, protein t 49.3 1.4E+02 0.0048 26.4 15.4 64 268-335 274-339 (416)
129 2z3z_A Dipeptidyl aminopeptida 49.2 1.9E+02 0.0067 28.0 18.2 209 111-340 189-442 (706)
130 1yfq_A Cell cycle arrest prote 48.9 1.2E+02 0.004 25.9 10.2 72 268-341 22-97 (342)
131 1n7d_A LDL receptor, low-densi 48.7 1.1E+02 0.0036 30.5 10.7 115 217-339 499-620 (699)
132 1got_B GT-beta; complex (GTP-b 48.0 1.4E+02 0.0047 25.9 14.6 96 237-337 78-177 (340)
133 1pjx_A Dfpase, DIISOPROPYLFLUO 47.9 85 0.0029 26.6 9.0 110 222-339 28-167 (314)
134 2hqs_A Protein TOLB; TOLB, PAL 47.6 1.6E+02 0.0055 26.6 18.4 183 123-341 204-395 (415)
135 3ow8_A WD repeat-containing pr 47.6 1.4E+02 0.0046 25.8 10.4 67 269-337 48-115 (321)
136 1yfq_A Cell cycle arrest prote 47.4 1.3E+02 0.0045 25.6 16.9 97 237-337 171-286 (342)
137 4gga_A P55CDC, cell division c 47.3 1.6E+02 0.0054 26.4 12.4 86 249-338 95-183 (420)
138 1pgu_A Actin interacting prote 47.0 1.7E+02 0.0058 27.5 11.8 92 237-334 468-573 (615)
139 3u4y_A Uncharacterized protein 46.2 1.4E+02 0.0047 25.4 14.3 108 223-339 10-123 (331)
140 3bg1_A Protein SEC13 homolog; 45.8 1.4E+02 0.0049 25.5 14.6 55 279-333 187-247 (316)
141 1pgu_A Actin interacting prote 45.5 1.5E+02 0.0053 27.8 11.2 63 268-334 552-615 (615)
142 1erj_A Transcriptional repress 44.1 1.7E+02 0.0059 26.0 18.7 192 111-337 132-345 (393)
143 3sov_A LRP-6, low-density lipo 43.5 1.7E+02 0.0057 25.6 14.4 112 217-339 82-203 (318)
144 3v64_C Agrin; beta propeller, 42.7 1.8E+02 0.0061 25.7 17.8 207 110-354 81-298 (349)
145 3bg1_A Protein SEC13 homolog; 42.4 90 0.0031 26.9 8.3 94 237-334 36-137 (316)
146 1l0q_A Surface layer protein; 41.2 1.8E+02 0.0062 25.4 12.2 95 237-339 13-111 (391)
147 2hes_X YDR267CP; beta-propelle 41.2 1.2E+02 0.0042 26.2 9.0 70 268-339 118-190 (330)
148 3iz6_a 40S ribosomal protein R 41.2 1.9E+02 0.0064 25.5 12.7 96 237-337 229-333 (380)
149 3lrv_A PRE-mRNA-splicing facto 41.1 1.8E+02 0.006 25.2 10.4 66 268-336 138-204 (343)
150 3dsm_A Uncharacterized protein 41.0 1.8E+02 0.0061 25.2 15.8 140 186-338 16-166 (328)
151 4g56_B MGC81050 protein; prote 40.3 1.9E+02 0.0065 25.3 16.0 195 111-339 103-307 (357)
152 3frx_A Guanine nucleotide-bind 40.3 1.8E+02 0.006 25.0 11.8 66 270-337 31-100 (319)
153 2ovr_B FBW7, F-BOX/WD repeat p 40.3 2.1E+02 0.0071 25.8 20.9 112 217-334 323-443 (445)
154 1pby_B Quinohemoprotein amine 40.0 1.4E+02 0.0049 25.2 9.3 95 237-338 220-315 (337)
155 1egx_A VAsp, vasodilator-stimu 39.9 31 0.0011 25.6 3.9 42 123-173 12-53 (115)
156 3iz6_a 40S ribosomal protein R 39.4 2E+02 0.0068 25.4 15.7 98 237-338 181-285 (380)
157 2bkl_A Prolyl endopeptidase; m 39.3 2.8E+02 0.0096 27.0 19.5 143 187-340 252-404 (695)
158 1yr2_A Prolyl oligopeptidase; 39.2 2.9E+02 0.01 27.2 12.6 112 222-339 327-447 (741)
159 3o4h_A Acylamino-acid-releasin 39.0 2.4E+02 0.0083 26.6 11.5 109 218-337 116-231 (582)
160 3mkq_A Coatomer beta'-subunit; 38.8 2.9E+02 0.01 27.1 17.3 96 237-337 120-221 (814)
161 2hqs_A Protein TOLB; TOLB, PAL 38.7 2.2E+02 0.0075 25.6 17.1 182 123-340 160-351 (415)
162 3no2_A Uncharacterized protein 38.4 1.5E+02 0.0052 25.1 9.0 111 219-338 84-200 (276)
163 1flg_A Protein (quinoprotein e 37.2 2.9E+02 0.0099 26.6 11.7 114 217-339 63-199 (582)
164 3scy_A Hypothetical bacterial 37.1 2.1E+02 0.007 24.8 13.7 94 236-333 29-129 (361)
165 3iuj_A Prolyl endopeptidase; h 37.0 3.1E+02 0.011 26.8 17.1 112 222-340 291-412 (693)
166 2hes_X YDR267CP; beta-propelle 36.9 2E+02 0.0069 24.7 10.5 62 279-340 219-287 (330)
167 1vyh_C Platelet-activating fac 36.8 2.3E+02 0.0079 25.3 10.8 125 222-354 119-245 (410)
168 4h5i_A Guanine nucleotide-exch 36.6 2.2E+02 0.0075 25.0 14.5 101 237-337 198-304 (365)
169 1n7d_A LDL receptor, low-densi 36.3 2.7E+02 0.0091 27.6 11.4 55 217-275 543-601 (699)
170 3gre_A Serine/threonine-protei 35.9 1.5E+02 0.0051 26.6 9.0 108 223-339 182-298 (437)
171 3mbr_X Glutamine cyclotransfer 35.4 2E+02 0.0069 24.2 15.4 139 186-341 42-188 (243)
172 1p22_A F-BOX/WD-repeat protein 35.2 2.5E+02 0.0085 25.2 17.3 110 217-337 177-289 (435)
173 3p5b_L Low density lipoprotein 34.8 2.6E+02 0.0088 25.3 17.1 190 114-340 84-284 (400)
174 1got_B GT-beta; complex (GTP-b 34.7 2.2E+02 0.0076 24.5 13.4 94 237-337 207-305 (340)
175 2hz6_A Endoplasmic reticulum t 34.6 8 0.00027 35.2 -0.1 27 217-247 4-30 (369)
176 2oiz_A Aromatic amine dehydrog 34.2 1.3E+02 0.0044 26.7 8.1 57 283-341 286-342 (361)
177 3dm0_A Maltose-binding peripla 34.1 3.2E+02 0.011 26.4 11.7 60 279-338 403-466 (694)
178 2dk7_A Transcription elongatio 33.9 36 0.0012 22.9 3.0 18 318-335 24-41 (73)
179 3vl1_A 26S proteasome regulato 33.9 2.5E+02 0.0084 24.8 20.5 194 111-341 106-332 (420)
180 4ery_A WD repeat-containing pr 33.7 2.1E+02 0.0073 24.0 18.8 95 237-338 130-228 (312)
181 3i2n_A WD repeat-containing pr 33.3 2.2E+02 0.0077 24.1 18.9 108 222-335 223-355 (357)
182 2dg1_A DRP35, lactonase; beta 32.9 2.3E+02 0.0078 24.1 17.7 204 109-341 51-271 (333)
183 2kwv_A RAD30 homolog B, DNA po 32.8 21 0.00073 21.5 1.6 18 11-28 21-38 (48)
184 4gqb_B Methylosome protein 50; 32.6 2.5E+02 0.0086 24.5 12.6 60 279-338 101-163 (344)
185 4a11_B DNA excision repair pro 32.6 2.5E+02 0.0085 24.4 15.5 68 268-337 256-327 (408)
186 1w6s_A Methanol dehydrogenase 31.9 3.6E+02 0.012 26.1 11.6 111 217-339 57-197 (599)
187 2aq5_A Coronin-1A; WD40 repeat 31.9 2.7E+02 0.0091 24.6 21.2 94 237-335 155-256 (402)
188 3sov_A LRP-6, low-density lipo 31.6 2.6E+02 0.0088 24.3 12.1 154 186-355 100-262 (318)
189 4aez_A CDC20, WD repeat-contai 31.5 2.7E+02 0.0093 24.6 22.5 97 237-337 285-384 (401)
190 4a2l_A BT_4663, two-component 31.4 4E+02 0.014 26.4 20.2 205 108-339 220-442 (795)
191 1ddw_A GLGF-domain protein hom 31.1 79 0.0027 23.5 5.0 39 123-173 12-51 (120)
192 4a0p_A LRP6, LRP-6, low-densit 30.6 3.8E+02 0.013 26.0 19.8 182 115-337 8-201 (628)
193 3hxj_A Pyrrolo-quinoline quino 30.5 2.5E+02 0.0084 23.7 10.1 30 310-339 221-250 (330)
194 4h5i_A Guanine nucleotide-exch 30.2 2.8E+02 0.0096 24.3 11.4 73 222-300 280-359 (365)
195 4ggc_A P55CDC, cell division c 30.1 2.4E+02 0.0082 23.5 13.2 60 280-339 44-104 (318)
196 1r5m_A SIR4-interacting protei 30.1 2.8E+02 0.0095 24.2 20.3 96 237-339 228-325 (425)
197 2xdw_A Prolyl endopeptidase; a 30.0 4E+02 0.014 26.0 13.5 112 223-339 298-422 (710)
198 2pm7_B Protein transport prote 29.5 2.5E+02 0.0086 23.5 19.6 56 279-334 178-239 (297)
199 3hrp_A Uncharacterized protein 28.9 3.2E+02 0.011 24.6 12.9 198 108-341 136-362 (409)
200 2ynn_A Coatomer subunit beta'; 28.6 2.7E+02 0.0091 23.5 12.8 93 237-335 36-130 (304)
201 4g56_B MGC81050 protein; prote 28.5 3E+02 0.01 24.0 16.1 90 237-334 250-344 (357)
202 2pbi_B Guanine nucleotide-bind 28.3 3E+02 0.01 24.0 12.7 127 222-354 209-337 (354)
203 3s3x_D Psalmotoxin-1; acid-sen 28.2 33 0.0011 18.6 1.7 23 109-132 14-36 (37)
204 4aow_A Guanine nucleotide-bind 28.2 2.7E+02 0.0092 23.4 12.3 96 237-338 151-251 (340)
205 3nok_A Glutaminyl cyclase; bet 28.1 2.9E+02 0.0098 23.7 13.4 134 189-341 77-219 (268)
206 2xzm_R RACK1; ribosome, transl 27.7 2.9E+02 0.01 23.7 12.2 68 268-337 38-111 (343)
207 2xyi_A Probable histone-bindin 27.2 3E+02 0.01 24.7 9.5 56 279-334 202-264 (430)
208 3gre_A Serine/threonine-protei 26.8 2.4E+02 0.0082 25.1 8.8 67 268-338 181-250 (437)
209 3no2_A Uncharacterized protein 26.4 2.9E+02 0.01 23.2 11.8 111 222-341 47-163 (276)
210 4aow_A Guanine nucleotide-bind 26.3 2.9E+02 0.0099 23.2 12.1 71 269-341 51-125 (340)
211 2jp2_A Spred-2, sprouty-relate 26.3 71 0.0024 24.0 4.0 42 123-173 21-65 (126)
212 4ery_A WD repeat-containing pr 26.3 2.9E+02 0.0098 23.1 20.8 106 222-337 160-272 (312)
213 3dr2_A Exported gluconolactona 25.9 3E+02 0.01 23.2 16.7 102 236-342 169-276 (305)
214 2iwa_A Glutamine cyclotransfer 25.6 3.1E+02 0.011 23.3 12.8 139 186-341 43-190 (266)
215 3odt_A Protein DOA1; ubiquitin 25.1 2.9E+02 0.0099 22.8 15.0 68 267-339 194-261 (313)
216 2pm9_A Protein WEB1, protein t 24.7 1.1E+02 0.0037 27.1 5.8 96 237-335 46-147 (416)
217 3azo_A Aminopeptidase; POP fam 23.9 4.8E+02 0.016 24.9 13.3 111 222-340 252-376 (662)
218 2ynn_A Coatomer subunit beta'; 23.8 3.2E+02 0.011 22.9 21.5 68 268-339 197-265 (304)
219 3v9f_A Two-component system se 23.8 5.3E+02 0.018 25.4 19.8 201 112-340 322-531 (781)
220 1i2h_A PSD-ZIP45(homer-1C/VESL 23.8 1.1E+02 0.0038 24.3 4.8 39 123-173 17-56 (168)
221 3sfz_A APAF-1, apoptotic pepti 23.8 6.4E+02 0.022 26.3 20.4 99 237-339 724-834 (1249)
222 2ymu_A WD-40 repeat protein; u 23.2 4.5E+02 0.015 24.3 20.7 96 237-340 408-505 (577)
223 3p5b_L Low density lipoprotein 23.0 4.1E+02 0.014 23.8 19.0 174 154-355 160-344 (400)
224 1nir_A Nitrite reductase; hemo 22.5 4.9E+02 0.017 24.5 13.6 107 222-338 148-262 (543)
225 1nr0_A Actin interacting prote 22.4 2.7E+02 0.0091 26.6 8.5 62 269-333 460-522 (611)
226 1sq9_A Antiviral protein SKI8; 22.0 3.9E+02 0.013 23.1 17.2 57 279-337 205-271 (397)
227 3ju4_A Endo-N-acetylneuraminid 21.7 4.4E+02 0.015 24.5 8.7 60 217-276 343-405 (670)
228 3azo_A Aminopeptidase; POP fam 21.7 5.3E+02 0.018 24.5 11.8 103 236-339 161-280 (662)
229 3c5m_A Oligogalacturonate lyas 21.1 4E+02 0.014 23.0 9.0 144 186-341 167-337 (396)
230 3zwl_B Eukaryotic translation 20.8 3.8E+02 0.013 22.6 14.5 94 237-338 198-309 (369)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.12 E-value=2.1e-11 Score=80.50 Aligned_cols=45 Identities=24% Similarity=0.487 Sum_probs=39.4
Q ss_pred cccCCCCcHHHHHHHHhcCCccccchhhccccchhhhhCCHHHHH
Q 045735 8 VESNADLPADAIIEMLLRLPVKSLIRYRSVCKSWYILTKSPRFIH 52 (378)
Q Consensus 8 ~~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~p~F~~ 52 (378)
...+..||+|++.+||++||++++.++++|||+|+.++.++.|.+
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 344889999999999999999999999999999999999988744
No 2
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.08 E-value=3.9e-11 Score=107.32 Aligned_cols=48 Identities=25% Similarity=0.484 Sum_probs=46.0
Q ss_pred CCCCcHHHHHHHHhcCCccccc-hhhccccchhhhhCCHHHHHHhhhcc
Q 045735 11 NADLPADAIIEMLLRLPVKSLI-RYRSVCKSWYILTKSPRFIHKHQRKD 58 (378)
Q Consensus 11 ~~~LP~Dll~eIL~rLP~~sl~-r~r~VcK~W~~li~~p~F~~~~~~~~ 58 (378)
+..||+|++.+||+|||+++|+ ||++|||+|+.++++|.|.+.++.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 7899999999999999999999 99999999999999999999998775
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.06 E-value=1.3e-07 Score=86.09 Aligned_cols=208 Identities=10% Similarity=0.058 Sum_probs=130.9
Q ss_pred eeecccceEEEEeC-----------CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEe
Q 045735 108 FVGPYEGIFCLMNG-----------NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLL 176 (378)
Q Consensus 108 ~~~s~~GLll~~~~-----------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~ 176 (378)
-++..+|.|.+..+ ..+ .++||.|++|..+|+++..+ ....+ ..++ =+++.+....
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~-~~~d~~~~~W~~~~~~p~~r------~~~~~-~~~~-----~~iyv~GG~~ 131 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSAL-DCYNPMTNQWSPCAPMSVPR------NRIGV-GVID-----GHIYAVGGSH 131 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCE-EEEETTTTEEEECCCCSSCC------BTCEE-EEET-----TEEEEECCEE
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceE-EEECCCCCeEeECCCCCcCc------cccEE-EEEC-----CEEEEEcCCC
Confidence 34455676666543 246 99999999999998876532 11111 1222 1455553211
Q ss_pred ecCcCCcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCc--cEEEEEECCCceeeeeC-C
Q 045735 177 DTKIDFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGEN--HVIISFDLSDEVIQEIE-S 253 (378)
Q Consensus 177 ~~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~il~fD~~~e~~~~i~-~ 253 (378)
. ......+++|+..+++|+.+... |.......++.++|.+|-+....... ..+..||+.+++|..++ +
T Consensus 132 ~-----~~~~~~~~~yd~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 202 (308)
T 1zgk_A 132 G-----CIHHNSVERYEPERDEWHLVAPM----LTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM 202 (308)
T ss_dssp T-----TEECCCEEEEETTTTEEEECCCC----SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC
T ss_pred C-----CcccccEEEECCCCCeEeECCCC----CccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC
Confidence 1 11246789999999999998743 22222226678899999987644321 47999999999999884 3
Q ss_pred CCCCCCCcccEEEECCeEEEEEe-cCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CC
Q 045735 254 PCTPELTHGPLGLYDNSLSLIAL-DEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DG 324 (378)
Q Consensus 254 P~~~~~~~~~l~~~~g~L~~~~~-~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~ 324 (378)
|... .....+..+++|.++.. ......-++|+++- .+|.++..++. + ......+.-+++|++..+ ..
T Consensus 203 p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~-r~~~~~~~~~~~i~v~GG~~~~~~~~ 278 (308)
T 1zgk_A 203 NTIR--SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH-R-RSALGITVHQGRIYVLGGYDGHTFLD 278 (308)
T ss_dssp SSCC--BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS-C-CBSCEEEEETTEEEEECCBCSSCBCC
T ss_pred CCcc--ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCC-C-ccceEEEEECCEEEEEcCcCCCcccc
Confidence 3322 12456677999988753 12222456777765 88998654322 1 112222334788877732 34
Q ss_pred EEEEEeCCCCeEEEEEE
Q 045735 325 QLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 325 ~~~~yd~~t~~~~~v~~ 341 (378)
.+..||+++++|+++..
T Consensus 279 ~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 279 SVECYDPDTDTWSEVTR 295 (308)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred eEEEEcCCCCEEeecCC
Confidence 69999999999999854
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.05 E-value=6.6e-08 Score=88.33 Aligned_cols=194 Identities=8% Similarity=-0.020 Sum_probs=123.8
Q ss_pred eEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCccccc
Q 045735 124 YISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGFR 203 (378)
Q Consensus 124 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 203 (378)
+ +++||.|++|..+|+++..+ ....+ ..++ =+++.+..... .........+++|+..+++|+.+.
T Consensus 69 ~-~~~d~~~~~W~~~~~~p~~r------~~~~~-~~~~-----~~lyv~GG~~~--~~~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 69 F-LQFDHLDSEWLGMPPLPSPR------CLFGL-GEAL-----NSIYVVGGREI--KDGERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp E-EEEETTTTEEEECCCBSSCE------ESCEE-EEET-----TEEEEECCEES--STTCCBCCCEEEEETTTTEEEECC
T ss_pred e-EEecCCCCeEEECCCCCcch------hceeE-EEEC-----CEEEEEeCCcC--CCCCcccceEEEECCCCCcEeECC
Confidence 5 89999999999998877531 11111 1112 25555543211 011234667999999999999987
Q ss_pred CCCCCCCccccCCCceEECceEEEEeeec-CCc--cEEEEEECCCceeeeeC-CCCCCCCCcccEEEECCeEEEEEec-C
Q 045735 204 GFKLGRDYVCGRIDSTYWNGVCYWLAREE-GEN--HVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYDNSLSLIALD-E 278 (378)
Q Consensus 204 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~--~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~~~~~~-~ 278 (378)
.. |.......++.++|.+|.+.... ... ..+..||+.+++|+.++ +|... .....+..+|+|.++... .
T Consensus 134 ~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 134 PL----PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR--SLFGATVHDGRIIVAAGVTD 207 (315)
T ss_dssp CC----SSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEEEEECS
T ss_pred CC----CCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch--hceEEEEECCEEEEEeccCC
Confidence 53 22222236788999999988652 211 47999999999999885 34332 124566779999987542 2
Q ss_pred CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEeeC---------------CEEEEEeCCCCeEEEEE
Q 045735 279 IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSD---------------GQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 279 ~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~---------------~~~~~yd~~t~~~~~v~ 340 (378)
....-++|+++- .+|..+-.++ .+ ......+.-++.|++..+. ..+..||+++++|+++.
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~~p-~~-r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEAFP-QE-RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECCCS-SC-CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCccceEEEEECCCCeEEECCCCC-Cc-ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 233457888876 8899875432 22 1122223337777776321 34889999999999993
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.04 E-value=8.5e-08 Score=87.73 Aligned_cols=208 Identities=8% Similarity=0.076 Sum_probs=130.8
Q ss_pred eeecccceEEEEeCC-------------ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEE
Q 045735 108 FVGPYEGIFCLMNGN-------------KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILT 174 (378)
Q Consensus 108 ~~~s~~GLll~~~~~-------------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~ 174 (378)
.++..+|.|.+..+. .+ +++||.|++|..+|+++..+ ....+ ..++ =+++.+..
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~-~~~d~~~~~W~~~~~~p~~r------~~~~~-~~~~-----~~iyv~GG 117 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYF-FQLDNVSSEWVGLPPLPSAR------CLFGL-GEVD-----DKIYVVAG 117 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEE-EEEETTTTEEEECSCBSSCB------CSCEE-EEET-----TEEEEEEE
T ss_pred EEEEECCEEEEECCcccCccccCCCccccE-EEEeCCCCcEEECCCCCccc------cccce-EEEC-----CEEEEEcC
Confidence 445566666655441 15 89999999999998877532 11111 1122 24655543
Q ss_pred EeecCcCCcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCC---ccEEEEEECCCceeeee
Q 045735 175 LLDTKIDFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGE---NHVIISFDLSDEVIQEI 251 (378)
Q Consensus 175 ~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~---~~~il~fD~~~e~~~~i 251 (378)
.... .......+++|+..+++|+.+... |.......++.++|.+|.+...... ...+..||+.+++|+.+
T Consensus 118 ~~~~---~~~~~~~~~~yd~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~ 190 (318)
T 2woz_A 118 KDLQ---TEASLDSVLCYDPVAAKWSEVKNL----PIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL 190 (318)
T ss_dssp EBTT---TCCEEEEEEEEETTTTEEEEECCC----SSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEE
T ss_pred ccCC---CCcccceEEEEeCCCCCEeECCCC----CCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC
Confidence 2110 122356799999999999998743 2222223667799999998764321 14699999999999998
Q ss_pred C-CCCCCCCCcccEEEECCeEEEEEe-cCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee-----
Q 045735 252 E-SPCTPELTHGPLGLYDNSLSLIAL-DEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS----- 322 (378)
Q Consensus 252 ~-~P~~~~~~~~~l~~~~g~L~~~~~-~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~----- 322 (378)
+ +|... .....+..+|+|.++.. ......-++|+++- .+|.++..++. +.. ....+.-++.|++..+
T Consensus 191 ~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~-~~~~~~~~~~i~v~GG~~~~~ 266 (318)
T 2woz_A 191 APMKTPR--SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ-ERS-SISLVSLAGSLYAIGGFAMIQ 266 (318)
T ss_dssp CCCSSCC--BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSS-CCB-SCEEEEETTEEEEECCBCCBC
T ss_pred CCCCCCc--ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCC-ccc-ceEEEEECCEEEEECCeeccC
Confidence 5 34332 12456678999999753 22223456777776 88998754322 211 2222334778877622
Q ss_pred ----------CCEEEEEeCCCCeEEEE
Q 045735 323 ----------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 323 ----------~~~~~~yd~~t~~~~~v 339 (378)
...+..||+++++|+++
T Consensus 267 ~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 267 LESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCceeccceeeeEEEEeCCCCEehhh
Confidence 24589999999999998
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.99 E-value=1e-07 Score=86.64 Aligned_cols=209 Identities=9% Similarity=0.027 Sum_probs=131.6
Q ss_pred eeecccceEEEEeC------CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcC
Q 045735 108 FVGPYEGIFCLMNG------NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKID 181 (378)
Q Consensus 108 ~~~s~~GLll~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~ 181 (378)
.....+|.|++..+ ..+ .++||.|++|..+|+++..+ .... ...++ -+++.+... . .
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~-~~~d~~~~~W~~~~~~p~~r------~~~~-~~~~~-----~~iyv~GG~--~--~ 112 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRM-DCYNVVKDSWYSKLGPPTPR------DSLA-ACAAE-----GKIYTSGGS--E--V 112 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEE-EEEETTTTEEEEEECCSSCC------BSCE-EEEET-----TEEEEECCB--B--T
T ss_pred EEEEECCEEEEEeCCCCCCcceE-EEEeCCCCeEEECCCCCccc------ccee-EEEEC-----CEEEEECCC--C--C
Confidence 44556777766654 356 99999999999998776432 1111 11222 245555321 1 0
Q ss_pred CcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCC------ccEEEEEECCCceeeeeC-CC
Q 045735 182 FYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGE------NHVIISFDLSDEVIQEIE-SP 254 (378)
Q Consensus 182 ~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~------~~~il~fD~~~e~~~~i~-~P 254 (378)
.......+++|+..+++|+.+... |.......++.++|.+|.+...... ...+..||+.+++|+.++ +|
T Consensus 113 ~~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 188 (306)
T 3ii7_A 113 GNSALYLFECYDTRTESWHTKPSM----LTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI 188 (306)
T ss_dssp TBSCCCCEEEEETTTTEEEEECCC----SSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS
T ss_pred CCcEeeeEEEEeCCCCceEeCCCC----cCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc
Confidence 122356799999999999998643 2222223668889999998764321 136899999999999985 34
Q ss_pred CCCCCCcccEEEECCeEEEEEe-cCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCE
Q 045735 255 CTPELTHGPLGLYDNSLSLIAL-DEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQ 325 (378)
Q Consensus 255 ~~~~~~~~~l~~~~g~L~~~~~-~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~ 325 (378)
... .....+..+|+|.++.. ......-++|+++- .+|..+-.++. + .....++.-++.|++..+ ...
T Consensus 189 ~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~-r~~~~~~~~~~~i~v~GG~~~~~~~~~ 264 (306)
T 3ii7_A 189 EAR--KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW-K-GVTVKCAAVGSIVYVLAGFQGVGRLGH 264 (306)
T ss_dssp SCC--BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC-C-BSCCEEEEETTEEEEEECBCSSSBCCE
T ss_pred chh--hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC-C-ccceeEEEECCEEEEEeCcCCCeeeee
Confidence 332 22456677999888732 11222335777765 88998753321 2 112222333778877743 257
Q ss_pred EEEEeCCCCeEEEEEE
Q 045735 326 LLLYDPNAQEMRDLGL 341 (378)
Q Consensus 326 ~~~yd~~t~~~~~v~~ 341 (378)
+..||+++++|+++..
T Consensus 265 ~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 265 ILEYNTETDKWVANSK 280 (306)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCeEEeCCC
Confidence 9999999999999864
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.98 E-value=1.7e-07 Score=84.80 Aligned_cols=208 Identities=10% Similarity=0.099 Sum_probs=130.7
Q ss_pred eeecccceEEEEeC-------CceEEEEeccccc---eecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEee
Q 045735 108 FVGPYEGIFCLMNG-------NKYISLWNLATQE---LRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLD 177 (378)
Q Consensus 108 ~~~s~~GLll~~~~-------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~ 177 (378)
.....+|.|.+..+ ..+ +++||.|++ |..+|+++..+ ....+ ..++ -+++.+.....
T Consensus 57 ~~~~~~~~l~v~GG~~~~~~~~~~-~~~d~~~~~~~~W~~~~~~p~~r------~~~~~-~~~~-----~~lyv~GG~~~ 123 (301)
T 2vpj_A 57 ASVSLHDRIYVIGGYDGRSRLSSV-ECLDYTADEDGVWYSVAPMNVRR------GLAGA-TTLG-----DMIYVSGGFDG 123 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCE-EEEETTCCTTCCCEEECCCSSCC------BSCEE-EEET-----TEEEEECCBCS
T ss_pred cEEEECCEEEEEcCCCCCccCceE-EEEECCCCCCCeeEECCCCCCCc------cceeE-EEEC-----CEEEEEcccCC
Confidence 44556676666543 256 999999999 99998776532 11111 1222 24555532111
Q ss_pred cCcCCcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCc--cEEEEEECCCceeeeeC-CC
Q 045735 178 TKIDFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGEN--HVIISFDLSDEVIQEIE-SP 254 (378)
Q Consensus 178 ~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~il~fD~~~e~~~~i~-~P 254 (378)
......+++|+..+++|+.+... |.......++.++|.+|.+....... ..+..||+.+++|..++ +|
T Consensus 124 -----~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 194 (301)
T 2vpj_A 124 -----SRRHTSMERYDPNIDQWSMLGDM----QTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA 194 (301)
T ss_dssp -----SCBCCEEEEEETTTTEEEEEEEC----SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS
T ss_pred -----CcccceEEEEcCCCCeEEECCCC----CCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC
Confidence 11256799999999999998643 22222236678899999987543321 47999999999999884 34
Q ss_pred CCCCCCcccEEEECCeEEEEEecC-CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEeeC------CE
Q 045735 255 CTPELTHGPLGLYDNSLSLIALDE-IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSD------GQ 325 (378)
Q Consensus 255 ~~~~~~~~~l~~~~g~L~~~~~~~-~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~------~~ 325 (378)
... .....+..+++|.++.... ....-++|+++- .+|..+-.++. +. .....+.-++.|++..+. ..
T Consensus 195 ~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r-~~~~~~~~~~~i~v~GG~~~~~~~~~ 270 (301)
T 2vpj_A 195 TKR--SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTT-PR-CYVGATVLRGRLYAIAGYDGNSLLSS 270 (301)
T ss_dssp SCC--BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSS-CC-BSCEEEEETTEEEEECCBCSSSBEEE
T ss_pred ccc--ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCC-cc-cceeEEEECCEEEEEcCcCCCccccc
Confidence 332 2245667799998874321 222345666665 88998754322 21 122223337888777421 46
Q ss_pred EEEEeCCCCeEEEEEE
Q 045735 326 LLLYDPNAQEMRDLGL 341 (378)
Q Consensus 326 ~~~yd~~t~~~~~v~~ 341 (378)
+..||+++++|+.+..
T Consensus 271 v~~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 271 IECYDPIIDSWEVVTS 286 (301)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCeEEEcCC
Confidence 8999999999999854
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.94 E-value=2.2e-07 Score=84.21 Aligned_cols=207 Identities=11% Similarity=0.126 Sum_probs=131.1
Q ss_pred eeecccceEEEEeC-------CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCc
Q 045735 108 FVGPYEGIFCLMNG-------NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKI 180 (378)
Q Consensus 108 ~~~s~~GLll~~~~-------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~ 180 (378)
-+...+|.|++..+ ..+ .++||.|++|..+|+++..+ ....+. .++ =+++.+.....
T Consensus 56 ~~~~~~~~lyv~GG~~~~~~~~~~-~~~d~~~~~W~~~~~~p~~r------~~~~~~-~~~-----~~iyv~GG~~~--- 119 (302)
T 2xn4_A 56 GMVYMAGLVFAVGGFNGSLRVRTV-DSYDPVKDQWTSVANMRDRR------STLGAA-VLN-----GLLYAVGGFDG--- 119 (302)
T ss_dssp EEEEETTEEEEESCBCSSSBCCCE-EEEETTTTEEEEECCCSSCC------BSCEEE-EET-----TEEEEEEEECS---
T ss_pred eEEEECCEEEEEeCcCCCccccce-EEECCCCCceeeCCCCCccc------cceEEE-EEC-----CEEEEEcCCCC---
Confidence 34455777766643 256 99999999999998876532 111111 222 15555543211
Q ss_pred CCcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCC----ccEEEEEECCCceeeeeC-CCC
Q 045735 181 DFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGE----NHVIISFDLSDEVIQEIE-SPC 255 (378)
Q Consensus 181 ~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----~~~il~fD~~~e~~~~i~-~P~ 255 (378)
......+++|+..+++|+.+... |.......++.++|.+|-+...... ...+..||+.+++|..++ +|.
T Consensus 120 --~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 193 (302)
T 2xn4_A 120 --STGLSSVEAYNIKSNEWFHVAPM----NTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMST 193 (302)
T ss_dssp --SCEEEEEEEEETTTTEEEEECCC----SSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSS
T ss_pred --CccCceEEEEeCCCCeEeecCCC----CCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcc
Confidence 12356799999999999998743 2221222667889999998754321 136899999999999884 343
Q ss_pred CCCCCcccEEEECCeEEEEEecC-CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEE
Q 045735 256 TPELTHGPLGLYDNSLSLIALDE-IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQL 326 (378)
Q Consensus 256 ~~~~~~~~l~~~~g~L~~~~~~~-~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~ 326 (378)
.. .....+..+|+|.++.... ....-++|+++- ..|..+..++... ...-.+.-++.|++..+ ...+
T Consensus 194 ~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~v 269 (302)
T 2xn4_A 194 RR--SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR--RNAGVCAVNGLLYVVGGDDGSCNLASV 269 (302)
T ss_dssp CC--BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCBCSSSBCCCE
T ss_pred cc--ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc--ccCeEEEECCEEEEECCcCCCcccccE
Confidence 32 2245667899999875321 222335777775 8899875433211 12222334788887732 2359
Q ss_pred EEEeCCCCeEEEEE
Q 045735 327 LLYDPNAQEMRDLG 340 (378)
Q Consensus 327 ~~yd~~t~~~~~v~ 340 (378)
..||+++++|+.+.
T Consensus 270 ~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 270 EYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEETTTTEEEECS
T ss_pred EEEcCCCCeEEECC
Confidence 99999999999885
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.84 E-value=7.7e-07 Score=80.46 Aligned_cols=193 Identities=10% Similarity=0.072 Sum_probs=122.6
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCC---c
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDS---W 199 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~---W 199 (378)
.+ .++||.|++|..+|+++..+ .... ....+ =+++.+.... .......+++|+..+++ |
T Consensus 32 ~~-~~~d~~~~~W~~~~~~p~~r------~~~~-~~~~~-----~~l~v~GG~~-----~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 32 VV-EKYDPKTQEWSFLPSITRKR------RYVA-SVSLH-----DRIYVIGGYD-----GRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CE-EEEETTTTEEEECCCCSSCC------BSCE-EEEET-----TEEEEECCBC-----SSCBCCCEEEEETTCCTTCCC
T ss_pred EE-EEEcCCCCeEEeCCCCChhh------cccc-EEEEC-----CEEEEEcCCC-----CCccCceEEEEECCCCCCCee
Confidence 56 99999999999998766421 1111 11222 1455553211 11235678999999999 9
Q ss_pred ccccCCCCCCCccccCCCceEECceEEEEeeecCCc--cEEEEEECCCceeeeeC-CCCCCCCCcccEEEECCeEEEEEe
Q 045735 200 RGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGEN--HVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYDNSLSLIAL 276 (378)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~~~~~ 276 (378)
+.+... |........+.++|.+|.+....... ..+..||+.+.+|..++ +|... .....+..+|+|.++..
T Consensus 94 ~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG 167 (301)
T 2vpj_A 94 YSVAPM----NVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR--EGAGLVVASGVIYCLGG 167 (301)
T ss_dssp EEECCC----SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC--BSCEEEEETTEEEEECC
T ss_pred EECCCC----CCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc--ccceEEEECCEEEEECC
Confidence 998643 32222236778899999987644321 47999999999999874 44332 22455667999988743
Q ss_pred c-CCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEEEE
Q 045735 277 D-EIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 277 ~-~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v~~ 341 (378)
. .....-++|+++- .+|.++-.++ .+ ......+.-++.|++..+ ...+..||+++++|+++..
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMA-TK-RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS 239 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCS-SC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCC-cc-cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC
Confidence 1 1223445677765 8999874332 22 122223334788877732 2469999999999999864
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.81 E-value=8.9e-07 Score=80.14 Aligned_cols=193 Identities=8% Similarity=0.104 Sum_probs=121.4
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccc
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGF 202 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 202 (378)
.+ .++||.+++|..+++.+..+ ....+ ..++ -+++.+... .. ......+++|+..+++|+.+
T Consensus 31 ~~-~~~d~~~~~W~~~~~~p~~r------~~~~~-~~~~-----~~lyv~GG~--~~---~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 31 SV-ECYDFKEERWHQVAELPSRR------CRAGM-VYMA-----GLVFAVGGF--NG---SLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CE-EEEETTTTEEEEECCCSSCC------BSCEE-EEET-----TEEEEESCB--CS---SSBCCCEEEEETTTTEEEEE
T ss_pred cE-EEEcCcCCcEeEcccCCccc------ccceE-EEEC-----CEEEEEeCc--CC---CccccceEEECCCCCceeeC
Confidence 56 99999999999998766532 11111 1111 245555321 11 12346789999999999998
Q ss_pred cCCCCCCCccccCCCceEECceEEEEeeecCCc--cEEEEEECCCceeeeeC-CCCCCCCCcccEEEECCeEEEEEec-C
Q 045735 203 RGFKLGRDYVCGRIDSTYWNGVCYWLAREEGEN--HVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYDNSLSLIALD-E 278 (378)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~~~~~~-~ 278 (378)
... |..-.....+.++|.+|-+....... ..+..||+.+.+|..++ +|... .....+..+|+|.++... .
T Consensus 93 ~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 93 ANM----RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR--SSVGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp CCC----SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCEET
T ss_pred CCC----CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc--cCceEEEECCEEEEEeCCCC
Confidence 753 22212226678899999987654322 47899999999999984 34332 124566779999886321 1
Q ss_pred CC--CEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEEEE
Q 045735 279 IK--KCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 279 ~~--~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v~~ 341 (378)
.. ..-++|+++- .+|..+-.++. + ......+.-++.|++..+ ...+..||+++++|+.+..
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~-~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMST-R-RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCSS-C-CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCCccccEEEEEeCCCCcEEECCCCcc-c-cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 11 1235666665 88998754322 2 122222333788887732 2469999999999999864
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.80 E-value=6.4e-07 Score=81.28 Aligned_cols=193 Identities=11% Similarity=0.067 Sum_probs=122.6
Q ss_pred CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCccc
Q 045735 122 NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRG 201 (378)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 201 (378)
..+ .++||.+++|..+++++..+ ....+. .++ + +++.+.... ......+++|+..+++|+.
T Consensus 24 ~~~-~~~d~~~~~W~~~~~~p~~r------~~~~~~-~~~----~-~lyv~GG~~------~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 24 QSC-RYFNPKDYSWTDIRCPFEKR------RDAACV-FWD----N-VVYILGGSQ------LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TSE-EEEETTTTEEEECCCCSCCC------BSCEEE-EET----T-EEEEECCBS------SSBCCEEEEEETTTTEEEE
T ss_pred ceE-EEecCCCCCEecCCCCCccc------ceeEEE-EEC----C-EEEEEeCCC------CCCcceEEEEeCCCCeEEE
Confidence 366 99999999999998876532 111111 222 1 355553211 1235678999999999999
Q ss_pred ccCCCCCCCccccCCCceEECceEEEEeeec-CCc--cEEEEEECCCceeeeeC-CCCCCCCCcccEEEECCeEEEEEe-
Q 045735 202 FRGFKLGRDYVCGRIDSTYWNGVCYWLAREE-GEN--HVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYDNSLSLIAL- 276 (378)
Q Consensus 202 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~--~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~~~~~- 276 (378)
+... |........+.++|.+|.+.... ... ..+..||+.+.+|..++ +|... .....+..+|+|.++..
T Consensus 85 ~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 85 KLGP----PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR--CSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp EECC----SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCE
T ss_pred CCCC----CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc--ceeEEEEECCEEEEECCC
Confidence 8643 22222236678899999987654 211 47999999999999884 34332 22455677999988632
Q ss_pred cCCCC----EEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEEEE
Q 045735 277 DEIKK----CYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 277 ~~~~~----~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v~~ 341 (378)
..... .-++|+++- ..|.++-.++. + ......+.-++.|++..+ ...+..||+++++|+.+..
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIE-A-RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSS-C-CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCC
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccc-h-hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC
Confidence 11221 445677765 89998753321 2 122223333778877632 2469999999999999853
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.79 E-value=8.8e-07 Score=82.20 Aligned_cols=217 Identities=13% Similarity=0.056 Sum_probs=126.8
Q ss_pred eeecccceEEEEeC---CceEEEEecc--ccceecCCCCc-CCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcC
Q 045735 108 FVGPYEGIFCLMNG---NKYISLWNLA--TQELRRLPKCR-ASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKID 181 (378)
Q Consensus 108 ~~~s~~GLll~~~~---~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~ 181 (378)
..+..+|.|.+..+ ..+ +++||. +++|..+|+++ ..+ ....+ ..++ =+++.+.........
T Consensus 14 ~~~~~~~~iyv~GG~~~~~~-~~~d~~~~~~~W~~~~~~p~~~R------~~~~~-~~~~-----~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAGTAW-YKLDTQAKDKKWTALAAFPGGPR------DQATS-AFID-----GNLYVFGGIGKNSEG 80 (357)
T ss_dssp EEEEETTEEEEECGGGTTCE-EEEETTSSSCCEEECCCCTTCCC------BSCEE-EEET-----TEEEEECCEEECTTS
T ss_pred EEEEECCEEEEEeCcCCCeE-EEEccccCCCCeeECCCCCCCcC------ccceE-EEEC-----CEEEEEcCCCCCCCc
Confidence 44455777776653 367 999998 49999998876 321 11111 1222 145555422110000
Q ss_pred CcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCC---------------------------
Q 045735 182 FYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGE--------------------------- 234 (378)
Q Consensus 182 ~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--------------------------- 234 (378)
.......+++|+..+++|+.+...+ |.......++..+|.+|.+......
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHA---PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCC---SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cceeeccEEEEeCCCCcEEECCCCC---CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 1123567899999999999987532 1211122557799999998764210
Q ss_pred ---------ccEEEEEECCCceeeee-CCCCCCCCCcccEEEECCeEEEEEe--cCCCCEEEEEEEc---C-CeeEEEEE
Q 045735 235 ---------NHVIISFDLSDEVIQEI-ESPCTPELTHGPLGLYDNSLSLIAL--DEIKKCYQLWVLK---E-RCWIKQFT 298 (378)
Q Consensus 235 ---------~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~~--~~~~~~~~IW~L~---~-~~W~~~~~ 298 (378)
...+..||+.+.+|+.+ ++|..... ...++..+++|.++.. ......-++|.++ + ..|.++..
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA-GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCB-SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCcc-cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 03799999999999988 34533222 1456677999988632 1112234566664 2 78998755
Q ss_pred EcCCCcceeceEEEECCeEEEEeeC-----------------------CEEEEEeCCCCeEEEEEE
Q 045735 299 IGPFIEAYNPLGLWKNGEIFLESSD-----------------------GQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 299 i~~~~~~~~~~~~~~~g~ill~~~~-----------------------~~~~~yd~~t~~~~~v~~ 341 (378)
++.........++..+++|++..+. ..+..||+++++|+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 237 VSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp SSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred CCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 4222112222234447888777421 247899999999999865
No 13
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.78 E-value=6.1e-07 Score=81.61 Aligned_cols=197 Identities=11% Similarity=0.036 Sum_probs=121.1
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccc
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGF 202 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 202 (378)
.+ .++||.|++|..+++.+..+ ....+. ..+ =+++.+...... .........+++|+..+++|+.+
T Consensus 40 ~~-~~~d~~~~~W~~~~~~p~~r------~~~~~~-~~~-----~~lyv~GG~~~~-~~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 40 YL-EAYNPSNGTWLRLADLQVPR------SGLAGC-VVG-----GLLYAVGGRNNS-PDGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CE-EEEETTTTEEEECCCCSSCC------BSCEEE-EET-----TEEEEECCEEEE-TTEEEECCCEEEEETTTTEEEEC
T ss_pred eE-EEEcCCCCeEeECCCCCccc------ccceEE-EEC-----CEEEEECCCcCC-CCCCeecceEEEECCCCCeEeEC
Confidence 56 99999999999998776532 111111 111 244444321000 00011245789999999999998
Q ss_pred cCCCCCCCccccCCCceEECceEEEEeeecCCc--cEEEEEECCCceeeeeC-CCCCCCCCcccEEEECCeEEEEEec-C
Q 045735 203 RGFKLGRDYVCGRIDSTYWNGVCYWLAREEGEN--HVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYDNSLSLIALD-E 278 (378)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~~~~~~-~ 278 (378)
... |........+.++|.+|.+....... ..+..||+.+.+|..++ +|.... ....+..+++|.++... .
T Consensus 106 ~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 106 APM----SVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI--GVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp CCC----SSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB--SCEEEEETTEEEEECCBCS
T ss_pred CCC----CcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc--ceEEEEECCEEEEEeCCCC
Confidence 743 22212226678899999987543321 36899999999999884 443322 24556679999887431 1
Q ss_pred CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEEEE
Q 045735 279 IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 279 ~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v~~ 341 (378)
....-++|+++- .+|..+-.++. +. ....++.-++.|++..+ ...+..||+++++|+++..
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~-~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNT-IR-SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSS-CC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCC-cc-ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 222345666665 89998654322 21 12222233788877742 2469999999999999863
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.69 E-value=5e-06 Score=75.68 Aligned_cols=206 Identities=8% Similarity=0.020 Sum_probs=122.0
Q ss_pred EEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeec-CcCCcccceeEEEEEc
Q 045735 116 FCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDT-KIDFYYDFSHIAVYNL 194 (378)
Q Consensus 116 ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~-~~~~~~~~~~~~vyss 194 (378)
+++..+..+ .++||.|++|.. ++.+... .+.. .+.... +=+++.+...... ..........+++|+.
T Consensus 7 l~~~GG~~~-~~yd~~~~~W~~-~~~~~p~----~r~~--~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 7 IFMISEEGA-VAYDPAANECYC-ASLSSQV----PKNH--VSLVTK----ENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEETTEE-EEEETTTTEEEE-EECCCCS----CSSE--EEEECT----TCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred EEEEcCCce-EEECCCCCeEec-CCCCCCC----Cccc--eEEEEE----CCEEEEEcCcccCCCCCccccccceEEecC
Confidence 344445677 999999999976 3332110 0111 122211 1234444432111 1001112344899999
Q ss_pred CCCCcccccCCCCCCCccccCCCceEECceEEEEeeec----CCc-cEEEEEECCCceeeeeC-CCCCCCCCcccEEEEC
Q 045735 195 STDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREE----GEN-HVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYD 268 (378)
Q Consensus 195 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~----~~~-~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~ 268 (378)
.+++|+.+... |..-.....+.++|.+|.+.... ... ..+..||+.+.+|+.++ +|... .....+..+
T Consensus 75 ~~~~W~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~ 148 (315)
T 4asc_A 75 LDSEWLGMPPL----PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSHM 148 (315)
T ss_dssp TTTEEEECCCB----SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEET
T ss_pred CCCeEEECCCC----CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--cceeEEEEC
Confidence 99999988643 32222236788899999987643 111 47999999999999874 44432 224566789
Q ss_pred CeEEEEEec--CCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEEEEEeCCCCeEEE
Q 045735 269 NSLSLIALD--EIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRD 338 (378)
Q Consensus 269 g~L~~~~~~--~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~ 338 (378)
|+|.++... .....-++|+++- .+|+++-.++. + .....++.-+++|++..+ ...+..||+++++|+.
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT-A-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS-C-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC-c-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 998887432 2233446777776 88998654321 2 122223333778877632 1269999999999999
Q ss_pred EEE
Q 045735 339 LGL 341 (378)
Q Consensus 339 v~~ 341 (378)
+..
T Consensus 227 ~~~ 229 (315)
T 4asc_A 227 FEA 229 (315)
T ss_dssp ECC
T ss_pred CCC
Confidence 864
No 15
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.63 E-value=3.4e-05 Score=73.66 Aligned_cols=43 Identities=16% Similarity=0.357 Sum_probs=38.6
Q ss_pred CCCCcHHHHHHHHhcCCccccchhhccccchhhhhCC-HHHHHH
Q 045735 11 NADLPADAIIEMLLRLPVKSLIRYRSVCKSWYILTKS-PRFIHK 53 (378)
Q Consensus 11 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~-p~F~~~ 53 (378)
+..||+|++.+||+.||+++|+++..|||+|+.++.+ +...+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 5679999999999999999999999999999999998 664443
No 16
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.61 E-value=4.4e-06 Score=76.22 Aligned_cols=209 Identities=10% Similarity=0.072 Sum_probs=122.3
Q ss_pred cceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCC-cccceeEEE
Q 045735 113 EGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDF-YYDFSHIAV 191 (378)
Q Consensus 113 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~-~~~~~~~~v 191 (378)
++.|++..+... .++||.|++|...|.+.. .+ +.. .+.... +=+++.+.......... ......+++
T Consensus 15 ~~~i~~~GG~~~-~~yd~~~~~W~~~~~~~~-~~----r~~--~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~~~ 82 (318)
T 2woz_A 15 KDLILLVNDTAA-VAYDPMENECYLTALAEQ-IP----RNH--SSIVTQ----QNQVYVVGGLYVDEENKDQPLQSYFFQ 82 (318)
T ss_dssp EEEEEEECSSEE-EEEETTTTEEEEEEECTT-SC----SSE--EEEECS----SSCEEEEESSCC-------CCCBEEEE
T ss_pred cchhhhccccce-EEECCCCCceecccCCcc-CC----ccc--eEEEEE----CCEEEEECCcccCccccCCCccccEEE
Confidence 456666666667 999999999987432211 10 111 111111 12344443210000000 011234899
Q ss_pred EEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecC--Cc--cEEEEEECCCceeeeeC-CCCCCCCCcccEEE
Q 045735 192 YNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEG--EN--HVIISFDLSDEVIQEIE-SPCTPELTHGPLGL 266 (378)
Q Consensus 192 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~--~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~ 266 (378)
|+..+++|+.+... |..-.....+.++|.+|.+..... .. ..+..||+.+.+|+.+. +|.... ....+.
T Consensus 83 ~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~ 156 (318)
T 2woz_A 83 LDNVSSEWVGLPPL----PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY--GHNVIS 156 (318)
T ss_dssp EETTTTEEEECSCB----SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE--SCEEEE
T ss_pred EeCCCCcEEECCCC----CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc--ccEEEE
Confidence 99999999988643 222122266788999999887541 11 47899999999999884 444321 134556
Q ss_pred ECCeEEEEEe--cCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEEee------CCEEEEEeCCCCeE
Q 045735 267 YDNSLSLIAL--DEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESS------DGQLLLYDPNAQEM 336 (378)
Q Consensus 267 ~~g~L~~~~~--~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~ 336 (378)
.+|+|.++.. ......-++|+++- .+|.++-.++. + .....++.-++.|++..+ ...+..||+++++|
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT-P-RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS-C-CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC-C-cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 8999988642 11222345777776 88998753321 2 111222333778877632 13588999999999
Q ss_pred EEEEE
Q 045735 337 RDLGL 341 (378)
Q Consensus 337 ~~v~~ 341 (378)
+++..
T Consensus 235 ~~~~~ 239 (318)
T 2woz_A 235 EVMTE 239 (318)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99864
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.61 E-value=7.5e-06 Score=78.03 Aligned_cols=280 Identities=12% Similarity=0.075 Sum_probs=140.0
Q ss_pred CCCCcHHHHHHHHhcCCccccchhhccccchhhhhCCHHHHHHhhhccC-C-CcEEEEEeecCccC-ccccceeEEEcc-
Q 045735 11 NADLPADAIIEMLLRLPVKSLIRYRSVCKSWYILTKSPRFIHKHQRKDH-N-TRLLVYCTFEDEND-RNLEMSYFTFFL- 86 (378)
Q Consensus 11 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~p~F~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~- 86 (378)
+..||+|++..||+.|++++|+++.+|||+|+.++.++.+.+....... . +............. .......+ ...
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~-~~~~ 97 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAY-IRQH 97 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHH-HHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHH-hhhh
Confidence 7789999999999999999999999999999999999988886654332 1 11000000000000 00000000 000
Q ss_pred --CCccc--cCC-CCCCCCCCCCCcceeecccceEEEEeCC-ceEEEEeccccceec-CCCCcCCCCCCcccccceeEEe
Q 045735 87 --DEKLI--DLS-TKRLDNPPIMPVGFVGPYEGIFCLMNGN-KYISLWNLATQELRR-LPKCRASLPPHTTIHNSSAGFG 159 (378)
Q Consensus 87 --~~~~~--~~~-~p~~~~~~~~~~~~~~s~~GLll~~~~~-~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~ 159 (378)
...+. ... ...+..........+...+.+++....+ .+ .|||..+++... ++... .....+.
T Consensus 98 ~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i-~vwd~~~~~~~~~~~~h~----------~~v~~~~ 166 (445)
T 2ovr_B 98 RIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTL-KVWSAVTGKCLRTLVGHT----------GGVWSSQ 166 (445)
T ss_dssp HHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCE-EEEETTTCCEEEECCCCS----------SCEEEEE
T ss_pred hhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcE-EEEECCCCcEEEEEcCCC----------CCEEEEE
Confidence 00000 000 0011111111101344445555555544 55 999999887653 33211 1123344
Q ss_pred ecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccccCCCCCCCccccCC-CceEECceEEEEeeecCCccEE
Q 045735 160 LDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYWNGVCYWLAREEGENHVI 238 (378)
Q Consensus 160 ~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~~G~lywl~~~~~~~~~i 238 (378)
+++ ++ +... .. ...+.+|+..++.-... . .. .... .++..+|........++ .|
T Consensus 167 ~~~---~~--l~s~---~~-------dg~i~vwd~~~~~~~~~--~----~~-h~~~v~~~~~~~~~l~s~s~dg---~i 221 (445)
T 2ovr_B 167 MRD---NI--IISG---ST-------DRTLKVWNAETGECIHT--L----YG-HTSTVRCMHLHEKRVVSGSRDA---TL 221 (445)
T ss_dssp EET---TE--EEEE---ET-------TSCEEEEETTTTEEEEE--E----CC-CSSCEEEEEEETTEEEEEETTS---EE
T ss_pred ecC---CE--EEEE---eC-------CCeEEEEECCcCcEEEE--E----CC-CCCcEEEEEecCCEEEEEeCCC---EE
Confidence 442 22 2221 11 34678888876632111 0 00 0011 34555665544444433 89
Q ss_pred EEEECCCceee-eeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeE
Q 045735 239 ISFDLSDEVIQ-EIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEI 317 (378)
Q Consensus 239 l~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~i 317 (378)
..+|+.+.+.. .+.... ....-...+|...+... ....+.+|-+... .....+...... ..++.-++..
T Consensus 222 ~~wd~~~~~~~~~~~~~~----~~v~~~~~~~~~l~~~~--~dg~i~iwd~~~~--~~~~~~~~~~~~--v~~~~~~~~~ 291 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMGHV----AAVRCVQYDGRRVVSGA--YDFMVKVWDPETE--TCLHTLQGHTNR--VYSLQFDGIH 291 (445)
T ss_dssp EEEESSSCCEEEEEECCS----SCEEEEEECSSCEEEEE--TTSCEEEEEGGGT--EEEEEECCCSSC--EEEEEECSSE
T ss_pred EEEECCCCcEEEEEcCCc----ccEEEEEECCCEEEEEc--CCCEEEEEECCCC--cEeEEecCCCCc--eEEEEECCCE
Confidence 99999876543 222111 11222334676655554 5678999977652 233333322211 1222225555
Q ss_pred EEE-eeCCEEEEEeCCCCeEE
Q 045735 318 FLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 318 ll~-~~~~~~~~yd~~t~~~~ 337 (378)
++. ..++.+.+||+++++..
T Consensus 292 l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEE
T ss_pred EEEEeCCCeEEEEECCCCCEE
Confidence 554 55778999999887643
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.49 E-value=1.6e-05 Score=73.62 Aligned_cols=150 Identities=12% Similarity=0.099 Sum_probs=89.7
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCC---ccEEEEEEC--CCceeeeeC-CCCCCCC
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGE---NHVIISFDL--SDEVIQEIE-SPCTPEL 259 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~---~~~il~fD~--~~e~~~~i~-~P~~~~~ 259 (378)
...+++|+..+++|+.+...+. +. ......+.++|.+|.+...... ...+..||+ .+.+|+.+. +|.....
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~--~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPW--YG-TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSS--CC-CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred cccEEEEeCCCCcEEECCCCCC--CC-cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 3689999999999999864321 11 1112668889999998653211 135777876 899999874 3333222
Q ss_pred CcccEEEECCeEEEEEecC------------------CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEE
Q 045735 260 THGPLGLYDNSLSLIALDE------------------IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFL 319 (378)
Q Consensus 260 ~~~~l~~~~g~L~~~~~~~------------------~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill 319 (378)
.....+..+|+|.++.... ....-++|+++- .+|.++-.++. +.. ...++.-+++|++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~-~~~~~~~~~~i~v 321 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ-GRA-YGVSLPWNNSLLI 321 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS-CCB-SSEEEEETTEEEE
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC-Ccc-cceeEEeCCEEEE
Confidence 2244678899998863210 112245666665 88999765432 212 2233444788877
Q ss_pred Eee-------CCEEEEEeCCCCeEEEEE
Q 045735 320 ESS-------DGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 320 ~~~-------~~~~~~yd~~t~~~~~v~ 340 (378)
..+ ...+..++++++++.+..
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 632 135888999999987764
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.42 E-value=1.7e-05 Score=80.44 Aligned_cols=212 Identities=10% Similarity=0.116 Sum_probs=123.0
Q ss_pred ccceEEEEeC------CceEEEEeccccceecCC-CCcCC-CCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCc
Q 045735 112 YEGIFCLMNG------NKYISLWNLATQELRRLP-KCRAS-LPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFY 183 (378)
Q Consensus 112 ~~GLll~~~~------~~~~~V~NP~T~~~~~LP-~~~~~-~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~ 183 (378)
.+|.|++..+ +.+ .++||.|++|..++ +.+.. .+. .+.... ...+.. +-+++.+... ... .
T Consensus 396 ~~~~iyv~GG~~~~~~~~v-~~yd~~~~~W~~~~~~~p~~~~p~--~R~~hs-~~~~~~---~~~lyv~GG~--~~~--~ 464 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEI-LQLSIHYDKIDMKNIEVSSSEVPV--ARMCHT-FTTISR---NNQLLLIGGR--KAP--H 464 (695)
T ss_dssp CSSCEEEECCBSSSBCCCE-EEEEECSSCEEEEECCCCCSCCCC--CCBSCE-EEEETT---TTEEEEECCB--SST--T
T ss_pred ECCEEEEECCCCCCCcCcE-EEEECCCCeEEEeccCCCCCCCCc--cccceE-EEEEcc---CCEEEEEcCC--CCC--C
Confidence 5666666554 256 99999999999887 42211 010 111111 112110 1245555321 110 1
Q ss_pred ccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE-CceEEEEeeecCCccEEEEEECCCceeeeeC----CCCCCC
Q 045735 184 YDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW-NGVCYWLAREEGENHVIISFDLSDEVIQEIE----SPCTPE 258 (378)
Q Consensus 184 ~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~il~fD~~~e~~~~i~----~P~~~~ 258 (378)
.....+++|+..+++|+.+... |..-....++.+ +|.+|-+....... .+..||+.+++|..++ +|....
T Consensus 465 ~~~~dv~~yd~~t~~W~~~~~~----p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMIKSL----SHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp CBCCCCEEEETTTTEEEECCCC----SBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred CccccEEEEeCCCCcEEECCCC----CCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCccc
Confidence 1245689999999999998643 322222255664 99999987654322 6999999999999886 343322
Q ss_pred CCcccEEEEC---CeEEEEEecC-C----CCEEEEEEEcCCe------eEEEEEEcCCCcceeceEEEECCeEEEEee--
Q 045735 259 LTHGPLGLYD---NSLSLIALDE-I----KKCYQLWVLKERC------WIKQFTIGPFIEAYNPLGLWKNGEIFLESS-- 322 (378)
Q Consensus 259 ~~~~~l~~~~---g~L~~~~~~~-~----~~~~~IW~L~~~~------W~~~~~i~~~~~~~~~~~~~~~g~ill~~~-- 322 (378)
. ...+.++ |+|.++.... . ...+.++-++... |.++...++.+.......+.+++.|++..+
T Consensus 540 ~--~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 540 V--SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp B--SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred c--eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 2 2323334 8888875321 1 2344444444455 888766433332333334444488888733
Q ss_pred -------CCEEEEEeCCCCeEEEEEE
Q 045735 323 -------DGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 323 -------~~~~~~yd~~t~~~~~v~~ 341 (378)
...+..||+++++|+.+..
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEeec
Confidence 2459999999999996654
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.40 E-value=9.2e-06 Score=77.27 Aligned_cols=45 Identities=33% Similarity=0.426 Sum_probs=40.1
Q ss_pred CCCCcHH----HHHHHHhcCCccccchhhccccchhhhhCCHHHHHHhh
Q 045735 11 NADLPAD----AIIEMLLRLPVKSLIRYRSVCKSWYILTKSPRFIHKHQ 55 (378)
Q Consensus 11 ~~~LP~D----ll~eIL~rLP~~sl~r~r~VcK~W~~li~~p~F~~~~~ 55 (378)
+..||+| ++..||+.|++++|+++.+|||+|+.++.++.+.+...
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~ 59 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLI 59 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 5679999 99999999999999999999999999999887666543
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.01 E-value=1.3e-06 Score=77.32 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=45.2
Q ss_pred CCCCcHHHHHHHHhcCCccccchhhccccchhhhhCCHHHHHHhhhcc
Q 045735 11 NADLPADAIIEMLLRLPVKSLIRYRSVCKSWYILTKSPRFIHKHQRKD 58 (378)
Q Consensus 11 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~p~F~~~~~~~~ 58 (378)
++.||+|++..||+.|++++|+++.+|||+||.+..++...+.++.+.
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 678999999999999999999999999999999999999998887775
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.68 E-value=0.00053 Score=68.95 Aligned_cols=204 Identities=12% Similarity=0.071 Sum_probs=114.0
Q ss_pred cceEEEEeC-------------CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecC
Q 045735 113 EGIFCLMNG-------------NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTK 179 (378)
Q Consensus 113 ~GLll~~~~-------------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~ 179 (378)
+|-|++..+ ..+ .++||.|++|..++.++..+ ........+..| -+++.+. ...
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~-~~yd~~t~~w~~~~~~~~~~----~~~~~~~~~~~~-----g~lyv~G---G~~ 263 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLT-SSWDPSTGIVSDRTVTVTKH----DMFCPGISMDGN-----GQIVVTG---GND 263 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEE-EEECTTTCCBCCCEEEECSC----CCSSCEEEECTT-----SCEEEEC---SSS
T ss_pred CCEEEEEecccccccccCCCCeEEE-EEEeCCCCcEEeCcccCCCC----CCccccccCCCC-----CCEEEeC---CCC
Confidence 777776632 135 89999999999998765432 111111222222 2455553 211
Q ss_pred cCCcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE-CceEEEEeeecC-Cc--cEEEEEECCCceeeeeC---
Q 045735 180 IDFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW-NGVCYWLAREEG-EN--HVIISFDLSDEVIQEIE--- 252 (378)
Q Consensus 180 ~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~-~~--~~il~fD~~~e~~~~i~--- 252 (378)
...+++|+..++.|+.+.. ++..-.....+.+ +|.+|-+..... .. ..+..||+.+++|..++
T Consensus 264 ------~~~v~~yd~~t~~W~~~~~----~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~ 333 (656)
T 1k3i_A 264 ------AKKTSLYDSSSDSWIPGPD----MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK 333 (656)
T ss_dssp ------TTCEEEEEGGGTEEEECCC----CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC
T ss_pred ------CCceEEecCcCCceeECCC----CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcc
Confidence 2379999999999998864 2322112245666 999999876321 11 46899999999999873
Q ss_pred -CCCCCCCCcccEEEECCeEEEEEe-------cCCCCEEEEEEEcCCeeEEEEEEcCC------CcceeceEEE--ECCe
Q 045735 253 -SPCTPELTHGPLGLYDNSLSLIAL-------DEIKKCYQLWVLKERCWIKQFTIGPF------IEAYNPLGLW--KNGE 316 (378)
Q Consensus 253 -~P~~~~~~~~~l~~~~g~L~~~~~-------~~~~~~~~IW~L~~~~W~~~~~i~~~------~~~~~~~~~~--~~g~ 316 (378)
.|...... ..+...++++.++.. ......+..|-.+...|.......+. +.......+. .+++
T Consensus 334 ~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~ 412 (656)
T 1k3i_A 334 VNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK 412 (656)
T ss_dssp SGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE
T ss_pred ccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCe
Confidence 12211111 112223455544321 11234555555555666653332221 0011111111 2788
Q ss_pred EEEEeeC---------C---EEEEEeCCCCeEEEEE
Q 045735 317 IFLESSD---------G---QLLLYDPNAQEMRDLG 340 (378)
Q Consensus 317 ill~~~~---------~---~~~~yd~~t~~~~~v~ 340 (378)
|++..+. . .+..||+++++|.++.
T Consensus 413 i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 413 ILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp EEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred EEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 8887431 1 6889999999999875
No 23
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.60 E-value=1.7e-05 Score=72.74 Aligned_cols=42 Identities=26% Similarity=0.553 Sum_probs=38.4
Q ss_pred ccCCCCcHHHHHHHHhcCCccccchhhccccchhhhhCCHHH
Q 045735 9 ESNADLPADAIIEMLLRLPVKSLIRYRSVCKSWYILTKSPRF 50 (378)
Q Consensus 9 ~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~p~F 50 (378)
..|+.||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 448999999999999999999999999999999999876653
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.50 E-value=0.00071 Score=68.03 Aligned_cols=213 Identities=10% Similarity=0.025 Sum_probs=117.8
Q ss_pred ecccceEEEEeC---CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 110 GPYEGIFCLMNG---NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 110 ~s~~GLll~~~~---~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
...+|.|++..+ ..+ .++||.|++|..+|+++..+ ....+ ..+ + +=|++.+... .. +....
T Consensus 250 ~~~~g~lyv~GG~~~~~v-~~yd~~t~~W~~~~~~~~~R------~~~s~-~~~-~---dg~iyv~GG~--~~--~~~~~ 313 (656)
T 1k3i_A 250 MDGNGQIVVTGGNDAKKT-SLYDSSSDSWIPGPDMQVAR------GYQSS-ATM-S---DGRVFTIGGS--WS--GGVFE 313 (656)
T ss_dssp ECTTSCEEEECSSSTTCE-EEEEGGGTEEEECCCCSSCC------SSCEE-EEC-T---TSCEEEECCC--CC--SSSCC
T ss_pred CCCCCCEEEeCCCCCCce-EEecCcCCceeECCCCCccc------cccce-EEe-c---CCeEEEEeCc--cc--CCccc
Confidence 346888877765 256 99999999999998776532 12211 121 1 1245555321 11 11135
Q ss_pred eeEEEEEcCCCCcccccCCC-CCCCccccCCCceEECceEEEEeeecCC------ccEEEEEECCCceeeeeCCCCCC--
Q 045735 187 SHIAVYNLSTDSWRGFRGFK-LGRDYVCGRIDSTYWNGVCYWLAREEGE------NHVIISFDLSDEVIQEIESPCTP-- 257 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~-~~~~~~~~~~~~v~~~G~lywl~~~~~~------~~~il~fD~~~e~~~~i~~P~~~-- 257 (378)
..+|+|+..+++|+.+.... .+++.. .....+..+|.+|.+...++. ...+..||+.+++|.....+...
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~ 392 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTA-DKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR 392 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCC-CTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT
T ss_pred ccceEeCCCCCcceeCCCccccccccc-cccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccc
Confidence 67999999999999875321 011111 111334467777776643311 13789999999887643211110
Q ss_pred -----CCCcccEE--EECCeEEEEEecC-------CCCEEEEEEEcC--CeeEEEE--EEcCCCcceeceEEEECCeEEE
Q 045735 258 -----ELTHGPLG--LYDNSLSLIALDE-------IKKCYQLWVLKE--RCWIKQF--TIGPFIEAYNPLGLWKNGEIFL 319 (378)
Q Consensus 258 -----~~~~~~l~--~~~g~L~~~~~~~-------~~~~~~IW~L~~--~~W~~~~--~i~~~~~~~~~~~~~~~g~ill 319 (378)
......++ ..+|+|.++.... ......|++.+- ..|.+.. .++ ......-..+..+|+|++
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp-~~R~~~~~~~l~~g~i~v 471 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY-FARTFHTSVVLPDGSTFI 471 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS-SCCBSCEEEECTTSCEEE
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC-CCcccCCeEECCCCCEEE
Confidence 00111111 2478888864311 112224555554 7898764 222 221222223334888888
Q ss_pred Eee------------CCEEEEEeCCCCeEEEEE
Q 045735 320 ESS------------DGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 320 ~~~------------~~~~~~yd~~t~~~~~v~ 340 (378)
..+ ...+..||+++++|+.+.
T Consensus 472 ~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 472 TGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp ECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred ECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 743 135899999999998875
No 25
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.43 E-value=0.0013 Score=66.69 Aligned_cols=152 Identities=7% Similarity=-0.067 Sum_probs=97.1
Q ss_pred ceeEEEEEcCCCCccccc-CCC-CCCCccccCCCceEE--CceEEEEeeecCCc---cEEEEEECCCceeeeeC-CCCCC
Q 045735 186 FSHIAVYNLSTDSWRGFR-GFK-LGRDYVCGRIDSTYW--NGVCYWLAREEGEN---HVIISFDLSDEVIQEIE-SPCTP 257 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~-~~~-~~~~~~~~~~~~v~~--~G~lywl~~~~~~~---~~il~fD~~~e~~~~i~-~P~~~ 257 (378)
...+.+|+..+++|+.+. ..+ ..+|..-.....+.+ +|.+|.+....... ..+..||+.+.+|..+. +|...
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 456899999999999987 311 123322222367888 99999987654311 46899999999999884 34332
Q ss_pred CCCcccEEEE-CCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEc--CCCcceeceEEEE-C-CeEEEEee--------
Q 045735 258 ELTHGPLGLY-DNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIG--PFIEAYNPLGLWK-N-GEIFLESS-------- 322 (378)
Q Consensus 258 ~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~--~~~~~~~~~~~~~-~-g~ill~~~-------- 322 (378)
.. ...+.. +|+|.++....... ++|+.+- ..|..+...+ |.+.......+.. + +.|++..+
T Consensus 491 -~~-h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~ 566 (695)
T 2zwa_A 491 -FR-HSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTV 566 (695)
T ss_dssp -BS-CEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCB
T ss_pred -cc-ceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCee
Confidence 12 344554 89999875422222 7888876 8899866422 1121222222322 3 77877742
Q ss_pred CCEEEEEeCCCCe------EEEEEE
Q 045735 323 DGQLLLYDPNAQE------MRDLGL 341 (378)
Q Consensus 323 ~~~~~~yd~~t~~------~~~v~~ 341 (378)
...+..||+++++ |+.+..
T Consensus 567 ~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 567 SDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred eCcEEEEEccCCccccceEEEEcCC
Confidence 1469999999999 888865
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.11 E-value=0.00011 Score=72.64 Aligned_cols=35 Identities=23% Similarity=0.435 Sum_probs=29.5
Q ss_pred cCCCCcHHHHHHHHhcCC-ccccchhhccccchhhh
Q 045735 10 SNADLPADAIIEMLLRLP-VKSLIRYRSVCKSWYIL 44 (378)
Q Consensus 10 ~~~~LP~Dll~eIL~rLP-~~sl~r~r~VcK~W~~l 44 (378)
.|+.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 388999999999999999 89999999999999998
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.43 E-value=0.00068 Score=66.99 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=31.9
Q ss_pred CCCCcHHHHHHHHhcC-Cccccchhhccccchhhh
Q 045735 11 NADLPADAIIEMLLRL-PVKSLIRYRSVCKSWYIL 44 (378)
Q Consensus 11 ~~~LP~Dll~eIL~rL-P~~sl~r~r~VcK~W~~l 44 (378)
...||+|++.+||++| |.+++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3479999999999999 899999999999999988
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.05 E-value=1.5 Score=37.82 Aligned_cols=191 Identities=8% Similarity=-0.025 Sum_probs=93.8
Q ss_pred eeecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccc
Q 045735 108 FVGPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYD 185 (378)
Q Consensus 108 ~~~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (378)
+.-..+|.+.+... ..+ +++|| +++......+.. .....++.+|+... +.... . .
T Consensus 104 i~~~~~g~l~v~~~~~~~i-~~~d~-~g~~~~~~~~~~--------~~~~~~i~~~~~g~---l~v~~----~------~ 160 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRI-GRITD-DGKIREYELPNK--------GSYPSFITLGSDNA---LWFTE----N------Q 160 (299)
T ss_dssp EEECTTSCEEEEETTTTEE-EEECT-TCCEEEEECSST--------TCCEEEEEECTTSC---EEEEE----T------T
T ss_pred eEECCCCCEEEEecCCceE-EEECC-CCCEEEecCCCC--------CCCCceEEEcCCCC---EEEEe----C------C
Confidence 33345677766653 366 89999 776654332211 12234666676532 22211 1 1
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCccc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGP 263 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (378)
...+.+|+. ++..+.... +.......++.+ +|.+|....... .|..||. ++++..+.+|..... ...
T Consensus 161 ~~~i~~~~~-~g~~~~~~~-----~~~~~~~~~i~~~~~g~l~v~~~~~~---~i~~~~~-~g~~~~~~~~~~~~~-~~~ 229 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKI-----PTPASGPVGITKGNDDALWFVEIIGN---KIGRITT-SGEITEFKIPTPNAR-PHA 229 (299)
T ss_dssp TTEEEEECT-TCCEEEEEC-----SSTTCCEEEEEECTTSSEEEEETTTT---EEEEECT-TCCEEEEECSSTTCC-EEE
T ss_pred CCEEEEEcC-CCcEEEeeC-----CCCCCcceeEEECCCCCEEEEccCCc---eEEEECC-CCcEEEEECCCCCCC-cee
Confidence 234566666 555443311 100111133444 578765543332 8999999 777776666532211 122
Q ss_pred EEE-ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEE
Q 045735 264 LGL-YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 264 l~~-~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~ 337 (378)
+.. -+|.|.+... ....+.+|-.+ .. ...+.+........-+.+ .+|.+++....+.+..||+++++++
T Consensus 230 i~~~~~g~l~v~~~--~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 230 ITAGAGIDLWFTEW--GANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp EEECSTTCEEEEET--TTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred EEECCCCCEEEecc--CCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 322 3577665442 34455555432 22 112222211111223445 6888888766678999999988764
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.58 E-value=3.8 Score=36.49 Aligned_cols=138 Identities=9% Similarity=0.183 Sum_probs=74.9
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCCCceEEC----ceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCc
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWN----GVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTH 261 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~----G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~ 261 (378)
-.+.+|+..++.|.........-... .++.++ |.+......+. .|..+|+.+..- ..+.+.......
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~v- 150 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASV----NSVQWAPHEYGPLLLVASSDG---KVSVVEFKENGTTSPIIIDAHAIGV- 150 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCE----EEEEECCGGGCSEEEEEETTS---EEEEEECCTTSCCCEEEEECCTTCE-
T ss_pred CEEEEEEcCCCceeEeeeecCCCcce----EEEEeCCCCCCCEEEEecCCC---cEEEEecCCCCceeeEEecCCCCce-
Confidence 45788888888776554321100000 223332 44444444433 788899876522 111111111110
Q ss_pred ccEEEE--------------CCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEEC---CeEEEE-e
Q 045735 262 GPLGLY--------------DNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKN---GEIFLE-S 321 (378)
Q Consensus 262 ~~l~~~--------------~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~---g~ill~-~ 321 (378)
..+.-. ++.+.+... ....+.||-+.. ..|.....+........-+.+.++ +.+++. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 111111 466665554 567899999976 567777766543333334455556 677665 4
Q ss_pred eCCEEEEEeCCCC
Q 045735 322 SDGQLLLYDPNAQ 334 (378)
Q Consensus 322 ~~~~~~~yd~~t~ 334 (378)
.++.+.+||++++
T Consensus 229 ~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 229 QDRTCIIWTQDNE 241 (379)
T ss_dssp TTSCEEEEEESST
T ss_pred CCCEEEEEeCCCC
Confidence 5778999999886
No 30
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.21 E-value=5.1 Score=36.87 Aligned_cols=200 Identities=11% Similarity=0.125 Sum_probs=98.2
Q ss_pred eee-cccceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 108 FVG-PYEGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 108 ~~~-s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
+++ |.+++|-+..+..+ +|||..|++...+-..... ......+.+.|. +.|-++.- . .
T Consensus 110 ~l~wS~~n~lAvgld~tV-~lWd~~tg~~~~~~~~~~~-------~~~V~sv~fspd-g~~lasgs-----~-------D 168 (420)
T 4gga_A 110 LVDWSSGNVLAVALDNSV-YLWSASSGDILQLLQMEQP-------GEYISSVAWIKE-GNYLAVGT-----S-------S 168 (420)
T ss_dssp CEEECTTSEEEEEETTEE-EEEETTTCCEEEEEECCST-------TCCEEEEEECTT-SSEEEEEE-----T-------T
T ss_pred eEEECCCCEEEEEeCCEE-EEEECCCCCEEEEEEecCC-------CCcEEEEEECCC-CCEEEEEE-----C-------C
Confidence 454 56777777667777 9999999987654322211 122345666664 33432221 1 3
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL 266 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 266 (378)
-.+.+|+..++.-... . ......-.++..+|.+-.....+. .+..+|..+.......+.............
T Consensus 169 g~v~iWd~~~~~~~~~--~----~~h~~~v~~~s~~~~~l~sgs~d~---~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~ 239 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRN--M----TSHSARVGSLSWNSYILSSGSRSG---HIHHHDVRVAEHHVATLSGHSQEVCGLRWA 239 (420)
T ss_dssp SCEEEEETTTTEEEEE--E----CCCSSCEEEEEEETTEEEEEETTS---EEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEEcCCCcEEEE--E----eCCCCceEEEeeCCCEEEEEeCCC---ceeEeeecccceeeEEecccccceeeeeec
Confidence 4678888877542111 0 000000144555665444333332 778888766443332222221111111112
Q ss_pred ECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEE-CCeEEEE-e--eCCEEEEEeCCCCeEEEE
Q 045735 267 YDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWK-NGEIFLE-S--SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 267 ~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~-~g~ill~-~--~~~~~~~yd~~t~~~~~v 339 (378)
.+|+..+... ....+.||-+.. ..+...............+.+.. ++.++.. . .++.+.+||+++++....
T Consensus 240 ~~g~~l~s~~--~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 240 PDGRHLASGG--NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp TTSSEEEEEE--TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred CCCCeeeeee--ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 2455544443 567888998765 22222222222221122223332 3344443 2 367899999999876544
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.08 E-value=6.3 Score=39.76 Aligned_cols=139 Identities=8% Similarity=0.168 Sum_probs=74.5
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCC-CceEEC----ceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCC
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYWN----GVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPEL 259 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~~----G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~ 259 (378)
.-.+.+|+..++.|......... ... .++.++ |........++ .|..+|+.+..-. ...+......
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h-----~~~V~~v~~sp~~~~~~l~sgs~dg---~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVH-----SASVNSVQWAPHEYGPLLLVASSDG---KVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCGGGCSEEEEEETTS---EEEEEECCSSSCCCCEEEECCSSC
T ss_pred CCeEEEEECCCCcccccccccCC-----CCCeEEEEECCCCCCCEEEEEeCCC---cEEEEEeecCCCcceeEeecCCCc
Confidence 34578888888876655432111 011 223332 54444444443 7888888765221 1111111100
Q ss_pred CcccEEEE--------------CCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEEC---CeEEEE
Q 045735 260 THGPLGLY--------------DNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKN---GEIFLE 320 (378)
Q Consensus 260 ~~~~l~~~--------------~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~---g~ill~ 320 (378)
. ..+... +|.+.+... ....+.||-+.. ..+.....+.....-..-+.+.++ +.+++.
T Consensus 148 v-~~l~~~p~~~~~~~~~~~~~d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 148 V-NSASWAPATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp E-EEEEECCCC---------CGGGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred e-EEEEecCcccccccccccCCCCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 0 111111 355555444 567899999987 566766666544333333455556 777666
Q ss_pred -eeCCEEEEEeCCCCe
Q 045735 321 -SSDGQLLLYDPNAQE 335 (378)
Q Consensus 321 -~~~~~~~~yd~~t~~ 335 (378)
..++.+.+||+++++
T Consensus 225 ~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EESSSCEEEEEESSSS
T ss_pred EecCCEEEEecCCCCC
Confidence 457789999998863
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=89.31 E-value=9.6 Score=32.59 Aligned_cols=189 Identities=10% Similarity=0.116 Sum_probs=95.4
Q ss_pred cccceEEEEe---CCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccce
Q 045735 111 PYEGIFCLMN---GNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFS 187 (378)
Q Consensus 111 s~~GLll~~~---~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (378)
..+|.+.+.. ...+ .++|+..+....+..... ....++.+|+..+ ++... . ...
T Consensus 86 ~~~g~l~v~~~~~~~~i-~~~d~~g~~~~~~~~~~~---------~~~~~i~~~~~g~---l~v~~----~------~~~ 142 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQI-QIYNQYGQFVRKFGATIL---------QHPRGVTVDNKGR---IIVVE----C------KVM 142 (286)
T ss_dssp TTTTEEEEEECGGGCEE-EEECTTSCEEEEECTTTC---------SCEEEEEECTTSC---EEEEE----T------TTT
T ss_pred cCCCeEEEEcCCCCCEE-EEECCCCcEEEEecCccC---------CCceEEEEeCCCC---EEEEE----C------CCC
Confidence 4677777666 3456 889965544444433221 2234667777532 22221 1 133
Q ss_pred eEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE
Q 045735 188 HIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG 265 (378)
Q Consensus 188 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~ 265 (378)
.+.+|+.....-+..... ... ....++.+ +|.+|....... .|..||...+....+..+.... ....+.
T Consensus 143 ~i~~~~~~g~~~~~~~~~-~~~----~~p~~i~~~~~g~l~v~~~~~~---~i~~~~~~g~~~~~~~~~g~~~-~p~~i~ 213 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCS-KHL----EFPNGVVVNDKQEIFISDNRAH---CVKVFNYEGQYLRQIGGEGITN-YPIGVG 213 (286)
T ss_dssp EEEEECTTSCEEEEEECT-TTC----SSEEEEEECSSSEEEEEEGGGT---EEEEEETTCCEEEEESCTTTSC-SEEEEE
T ss_pred EEEEEcCCCCEEEEeCCC-Ccc----CCcEEEEECCCCCEEEEECCCC---EEEEEcCCCCEEEEEccCCccC-CCcEEE
Confidence 566666544322222110 011 11134444 478766554433 8999999877666665432211 112232
Q ss_pred E-ECCeEEEEEecCCC-CEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEEeeCCEEEEEeCCCC
Q 045735 266 L-YDNSLSLIALDEIK-KCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQ 334 (378)
Q Consensus 266 ~-~~g~L~~~~~~~~~-~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~ 334 (378)
. -+|.|.+... .. ..+.+|-.+ ..-..............-+++.++|.+++...++.+.+|+....
T Consensus 214 ~d~~G~l~v~~~--~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 214 INSNGEILIADN--HNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp ECTTCCEEEEEC--SSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred ECCCCCEEEEeC--CCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 2 3677776554 33 378887532 32222222221111122355566888888766778988987653
No 33
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.75 E-value=9.6 Score=33.93 Aligned_cols=113 Identities=15% Similarity=0.199 Sum_probs=63.9
Q ss_pred Cce-EEEEeeecCCccEEEEEECCCceeeeeC----CCCCCCCCcccEE-EECCeEEEEEecCC-CCEEEEEEEcC--Ce
Q 045735 222 NGV-CYWLAREEGENHVIISFDLSDEVIQEIE----SPCTPELTHGPLG-LYDNSLSLIALDEI-KKCYQLWVLKE--RC 292 (378)
Q Consensus 222 ~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~----~P~~~~~~~~~l~-~~~g~L~~~~~~~~-~~~~~IW~L~~--~~ 292 (378)
+|. +|....... .|..||+.+.++..+. .|.... ....+. .-+|+..++.. .. ...+.||.++. ..
T Consensus 221 dg~~l~v~~~~~~---~v~v~~~~~g~~~~~~~~~~~~~~~~-~~~~i~~spdg~~l~v~~-~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 221 DGKFAYLINEIGG---TVIAFRYADGMLDEIQTVAADTVNAQ-GSGDIHLSPDGKYLYASN-RLKADGVAIFKVDETNGT 295 (361)
T ss_dssp TSSEEEEEETTTC---EEEEEEEETTEEEEEEEEESCSSCCC-CEEEEEECTTSSEEEEEE-CSSSCEEEEEEECTTTCC
T ss_pred CCCEEEEEcCCCC---eEEEEEecCCceEEeEEEecCCCCCC-CcccEEECCCCCEEEEEC-CCCCCEEEEEEEcCCCCc
Confidence 675 444432332 7888888877664432 222211 111222 23677544444 24 67899999973 66
Q ss_pred eEEEEEEcCCCcceeceEEEECCeEEEE-e-eCCEEEE--EeCCCCeEEEEE
Q 045735 293 WIKQFTIGPFIEAYNPLGLWKNGEIFLE-S-SDGQLLL--YDPNAQEMRDLG 340 (378)
Q Consensus 293 W~~~~~i~~~~~~~~~~~~~~~g~ill~-~-~~~~~~~--yd~~t~~~~~v~ 340 (378)
+..+..+.. .....-+.+.++|+.++. . .++.+.+ +|.++++++.+.
T Consensus 296 ~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 296 LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 666666553 212233566678885555 3 3455555 678889888774
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=88.21 E-value=15 Score=33.36 Aligned_cols=190 Identities=11% Similarity=0.079 Sum_probs=96.3
Q ss_pred ccceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEE
Q 045735 112 YEGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAV 191 (378)
Q Consensus 112 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 191 (378)
.+.++....+..+ .|||..+++...+-.... ......+.+.|. +.+ ++... . .-.+.+
T Consensus 103 ~~~l~~~~~d~~v-~lw~~~~~~~~~~~~~~~--------~~~v~~v~~s~~-~~~--l~~~~---~-------dg~i~i 160 (401)
T 4aez_A 103 NLNVVAVALERNV-YVWNADSGSVSALAETDE--------STYVASVKWSHD-GSF--LSVGL---G-------NGLVDI 160 (401)
T ss_dssp TTSEEEEEETTEE-EEEETTTCCEEEEEECCT--------TCCEEEEEECTT-SSE--EEEEE---T-------TSCEEE
T ss_pred CCCEEEEECCCeE-EEeeCCCCcEeEeeecCC--------CCCEEEEEECCC-CCE--EEEEC---C-------CCeEEE
Confidence 3455555556677 999999988765433221 122345666663 233 22221 1 346788
Q ss_pred EEcCCCCcccccCCCCCCCccccCC-CceEECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECC
Q 045735 192 YNLSTDSWRGFRGFKLGRDYVCGRI-DSTYWNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDN 269 (378)
Q Consensus 192 yss~~~~W~~~~~~~~~~~~~~~~~-~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g 269 (378)
|+..++.-...- .. .... .++.++|........++ .|..+|+.+..-....+....... ..+.. -+|
T Consensus 161 wd~~~~~~~~~~------~~-~~~~v~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~v-~~~~~~~~~ 229 (401)
T 4aez_A 161 YDVESQTKLRTM------AG-HQARVGCLSWNRHVLSSGSRSG---AIHHHDVRIANHQIGTLQGHSSEV-CGLAWRSDG 229 (401)
T ss_dssp EETTTCCEEEEE------CC-CSSCEEEEEEETTEEEEEETTS---EEEEEETTSSSCEEEEEECCSSCE-EEEEECTTS
T ss_pred EECcCCeEEEEe------cC-CCCceEEEEECCCEEEEEcCCC---CEEEEecccCcceeeEEcCCCCCe-eEEEEcCCC
Confidence 888766422111 00 0111 44556776555544443 899999974322211111111110 11111 156
Q ss_pred eEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC-eEEEEe---eCCEEEEEeCCCCeEEE
Q 045735 270 SLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG-EIFLES---SDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 270 ~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g-~ill~~---~~~~~~~yd~~t~~~~~ 338 (378)
.+.+... ....+.||-+... .....+........-+.+.+++ .++... .++.+.+||+++++...
T Consensus 230 ~~l~s~~--~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 230 LQLASGG--NDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp SEEEEEE--TTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred CEEEEEe--CCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 6555544 5678999987752 1223333222222334444444 455543 37889999998876543
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.41 E-value=16 Score=32.80 Aligned_cols=111 Identities=12% Similarity=0.156 Sum_probs=62.4
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCceee-eeCCCCCC------CC-CcccEEEECCeEEEEEecCCCCEEEEEEE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTP------EL-THGPLGLYDNSLSLIALDEIKKCYQLWVL 288 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~------~~-~~~~l~~~~g~L~~~~~~~~~~~~~IW~L 288 (378)
.++..+|.+|...... .|.+||..+++.. ..+++... .. ........+|.+.+... ...+..+-.
T Consensus 48 ~p~v~~~~v~~~~~~g----~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d~ 120 (376)
T 3q7m_A 48 HPALADNVVYAADRAG----LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALNT 120 (376)
T ss_dssp CCEEETTEEEEECTTS----EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEET
T ss_pred ccEEECCEEEEEcCCC----eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEEC
Confidence 6788899999876544 8999999765432 23333221 11 11334455777766432 233333322
Q ss_pred cC--CeeEEEEEEcCCCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 289 KE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 289 ~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
+. ..|... +.. .....|.. .++.+++...++.++.||.+|++..+-
T Consensus 121 ~tG~~~W~~~--~~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 121 SDGTVAWQTK--VAG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp TTCCEEEEEE--CSS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEe--CCC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 22 456442 221 11222332 367777777778899999999876543
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.84 E-value=19 Score=32.16 Aligned_cols=197 Identities=12% Similarity=0.028 Sum_probs=91.6
Q ss_pred cccceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEE
Q 045735 111 PYEGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIA 190 (378)
Q Consensus 111 s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 190 (378)
+-++.++....+..+.|||..|++........... .......+.+.|.. .+ ++.. .. .-.+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-----H~~~V~~v~~spdg-~~--l~sg---s~-------d~~i~ 152 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYE-----HDDIVSTVSVLSSG-TQ--AVSG---SK-------DICIK 152 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC-----CSSCEEEEEECTTS-SE--EEEE---ET-------TSCEE
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccC-----CCCCEEEEEECCCC-CE--EEEE---eC-------CCeEE
Confidence 34565555554433399999988755332211100 01223455666643 22 2221 11 34577
Q ss_pred EEEcCCCCcccccCCCCCCCccccCC-CceEE--CceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccEEE
Q 045735 191 VYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPLGL 266 (378)
Q Consensus 191 vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~ 266 (378)
+++..++.=. .. +.. .... .++.+ +|.-+.+....+. .|..+|+.+.+.. .+..+..... ...+..
T Consensus 153 iwd~~~~~~~--~~----~~~-h~~~V~~~~~~~~~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~ 222 (344)
T 4gqb_B 153 VWDLAQQVVL--SS----YRA-HAAQVTCVAASPHKDSVFLSCSEDN--RILLWDTRCPKPASQIGCSAPGYL-PTSLAW 222 (344)
T ss_dssp EEETTTTEEE--EE----ECC-CSSCEEEEEECSSCTTEEEEEETTS--CEEEEETTSSSCEEECC----CCC-EEEEEE
T ss_pred EEECCCCcEE--EE----EcC-cCCceEEEEecCCCCCceeeecccc--ccccccccccceeeeeecceeecc-ceeeee
Confidence 8887765311 10 000 0000 22222 3322222332222 6888999876543 3332222111 011221
Q ss_pred --ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC-eEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 267 --YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG-EIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 267 --~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g-~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
.++++.+... ....+.||-+... ..+..+........-+.+.++| .++.. ..++.+.+||.+++++.+.
T Consensus 223 ~p~~~~~l~sg~--~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 223 HPQQSEVFVFGD--ENGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp CSSCTTEEEEEE--TTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred cCCCCcceEEec--cCCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 1455555444 5678999976651 1222332222222334455565 45544 5577899999999986554
No 37
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=85.78 E-value=8.5 Score=32.87 Aligned_cols=110 Identities=14% Similarity=0.101 Sum_probs=60.6
Q ss_pred CceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECCeEEEEEecCCCCEEEEEEEcC-Ce
Q 045735 217 DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDNSLSLIALDEIKKCYQLWVLKE-RC 292 (378)
Q Consensus 217 ~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~L~~-~~ 292 (378)
.++.. +|.+|....... .|..||.. .++..+.+|..... ...+.. -+|.|.+... ....+ ++++. ..
T Consensus 23 ~~i~~d~~g~l~v~~~~~~---~v~~~~~~-~~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~--~~~~v--~~~d~~g~ 93 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHKAN---KISSLDQS-GRIKEFEVPTPDAK-VMCLIVSSLGDIWFTEN--GANKI--GKLSKKGG 93 (300)
T ss_dssp EEEEECTTSCEEEEETTTT---EEEEECTT-SCEEEEECSSTTCC-EEEEEECTTSCEEEEET--TTTEE--EEECTTSC
T ss_pred ceeeECCCCCEEEEcCCCC---eEEEECCC-CceEEEECCCCCCc-ceeEEECCCCCEEEEec--CCCeE--EEECCCCC
Confidence 44544 588777654333 89999998 77777776643211 122222 3577666443 23344 34443 44
Q ss_pred eEEEEEEcCCCcceece--EEEECCeEEEEee-CCEEEEEeCCCCeEEEE
Q 045735 293 WIKQFTIGPFIEAYNPL--GLWKNGEIFLESS-DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 293 W~~~~~i~~~~~~~~~~--~~~~~g~ill~~~-~~~~~~yd~~t~~~~~v 339 (378)
.. .+.+... ...|. .+.++|.+++... .+.++.||.+ +++..+
T Consensus 94 ~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 94 FT-EYPLPQP--DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp EE-EEECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred eE-EecCCCC--CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc
Confidence 32 2222211 13343 3445788877654 5689999998 666554
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=85.15 E-value=20 Score=31.93 Aligned_cols=183 Identities=10% Similarity=0.074 Sum_probs=90.4
Q ss_pred CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCccc
Q 045735 122 NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRG 201 (378)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 201 (378)
..+ .|||..+++....-.... .......+.+.|..+.+ +... .. ...+.+|+..++..+.
T Consensus 96 g~i-~iwd~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~--l~s~---~~-------d~~i~iwd~~~~~~~~ 155 (383)
T 3ei3_B 96 GDI-ILWDYDVQNKTSFIQGMG-------PGDAITGMKFNQFNTNQ--LFVS---SI-------RGATTLRDFSGSVIQV 155 (383)
T ss_dssp SCE-EEEETTSTTCEEEECCCS-------TTCBEEEEEEETTEEEE--EEEE---ET-------TTEEEEEETTSCEEEE
T ss_pred CeE-EEEeCCCcccceeeecCC-------cCCceeEEEeCCCCCCE--EEEE---eC-------CCEEEEEECCCCceEE
Confidence 355 999998877654322111 01233455565532222 2221 11 3457888887655544
Q ss_pred ccCCCCCCCccccCCCceEECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCe-EEEEEecCC
Q 045735 202 FRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNS-LSLIALDEI 279 (378)
Q Consensus 202 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~-L~~~~~~~~ 279 (378)
..... ...... ..-...-+|........+. .|..+|+..+....+..... .. ..+. .-+|+ +.+... .
T Consensus 156 ~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~h~~--~v-~~~~~~~~~~~~l~s~~--~ 225 (383)
T 3ei3_B 156 FAKTD-SWDYWY-CCVDVSVSRQMLATGDSTG---RLLLLGLDGHEIFKEKLHKA--KV-THAEFNPRCDWLMATSS--V 225 (383)
T ss_dssp EECCC-CSSCCE-EEEEEETTTTEEEEEETTS---EEEEEETTSCEEEEEECSSS--CE-EEEEECSSCTTEEEEEE--T
T ss_pred EeccC-CCCCCe-EEEEECCCCCEEEEECCCC---CEEEEECCCCEEEEeccCCC--cE-EEEEECCCCCCEEEEEe--C
Confidence 43211 000000 0011122455443333333 88999997665555542211 00 1111 12454 554444 5
Q ss_pred CCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEE-CCeEEEE-eeCCEEEEEeCCCCe
Q 045735 280 KKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWK-NGEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 280 ~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~-~g~ill~-~~~~~~~~yd~~t~~ 335 (378)
...+.||-+.. ..-.....+.. .....-+.+.+ ++..++. ..++.+.+||+++++
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEMPH-EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEEEC-SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CCEEEEEeCCCCCcccceEEEecC-CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 77999998876 11223333322 22233345556 7776665 557899999998865
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.96 E-value=14 Score=32.61 Aligned_cols=103 Identities=7% Similarity=-0.027 Sum_probs=57.7
Q ss_pred cEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC
Q 045735 236 HVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 236 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
..++.+|..+.++..+......... ..+. .-+|+|.+.........+.+|-++...+..+..+........-+++.++
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p-~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd 96 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNP-TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA 96 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCC-CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCc-ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC
Confidence 3688888888887765432211111 1222 2378855444323457899999876666655553321111222556678
Q ss_pred CeEEEE-e-eCCEEEEEeCC-CCeEEEE
Q 045735 315 GEIFLE-S-SDGQLLLYDPN-AQEMRDL 339 (378)
Q Consensus 315 g~ill~-~-~~~~~~~yd~~-t~~~~~v 339 (378)
|+.++. . .++.+.+||++ +++.+.+
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 875554 3 45779999985 4455444
No 40
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=83.99 E-value=19 Score=30.63 Aligned_cols=203 Identities=12% Similarity=0.116 Sum_probs=100.7
Q ss_pred eeecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccc
Q 045735 108 FVGPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYD 185 (378)
Q Consensus 108 ~~~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (378)
+.-+.+|-+.+... ..+ .++||..+....++...... .......++.+++..+ +++... .. .
T Consensus 35 v~~~~~g~l~v~~~~~~~i-~~~d~~g~~~~~~~~~~~~~----~~~~~p~~i~~~~~~g--~l~v~~--~~-------~ 98 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRI-QIFDKEGRFKFQFGECGKRD----SQLLYPNRVAVVRNSG--DIIVTE--RS-------P 98 (286)
T ss_dssp EEECTTCCEEEEEGGGTEE-EEECTTSCEEEEECCBSSST----TCBSSEEEEEEETTTT--EEEEEE--CG-------G
T ss_pred EEECCCCCEEEEECCCCEE-EEECCCCcEEEEecccCCCc----ccccCceEEEEEcCCC--eEEEEc--CC-------C
Confidence 33345666666542 356 89998866555555322110 0112345566643322 222221 10 1
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCccc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGP 263 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (378)
...+.+|+.....-+..... .. ....++.+ +|.+|....... .|..||...+....+..+.... ....
T Consensus 99 ~~~i~~~d~~g~~~~~~~~~--~~----~~~~~i~~~~~g~l~v~~~~~~---~i~~~~~~g~~~~~~~~~~~~~-~p~~ 168 (286)
T 1q7f_A 99 THQIQIYNQYGQFVRKFGAT--IL----QHPRGVTVDNKGRIIVVECKVM---RVIIFDQNGNVLHKFGCSKHLE-FPNG 168 (286)
T ss_dssp GCEEEEECTTSCEEEEECTT--TC----SCEEEEEECTTSCEEEEETTTT---EEEEECTTSCEEEEEECTTTCS-SEEE
T ss_pred CCEEEEECCCCcEEEEecCc--cC----CCceEEEEeCCCCEEEEECCCC---EEEEEcCCCCEEEEeCCCCccC-CcEE
Confidence 34566777433322222110 00 01133433 688766544332 7999998877666654432211 1122
Q ss_pred EE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceec--eEEEECCeEEEEee-CC-EEEEEeCCCCeEEE
Q 045735 264 LG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNP--LGLWKNGEIFLESS-DG-QLLLYDPNAQEMRD 338 (378)
Q Consensus 264 l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~--~~~~~~g~ill~~~-~~-~~~~yd~~t~~~~~ 338 (378)
+. .-+|+|.+... ....+.+|-.+ ... ...+.....+..| +++..+|.+++... ++ .+..||.+.+.++.
T Consensus 169 i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~ 243 (286)
T 1q7f_A 169 VVVNDKQEIFISDN--RAHCVKVFNYE-GQY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISA 243 (286)
T ss_dssp EEECSSSEEEEEEG--GGTEEEEEETT-CCE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEE
T ss_pred EEECCCCCEEEEEC--CCCEEEEEcCC-CCE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEE
Confidence 22 23577665443 35677777543 222 2233322212344 44455788887754 43 89999988877777
Q ss_pred EEE
Q 045735 339 LGL 341 (378)
Q Consensus 339 v~~ 341 (378)
+..
T Consensus 244 ~~~ 246 (286)
T 1q7f_A 244 LES 246 (286)
T ss_dssp EEE
T ss_pred Ecc
Confidence 655
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.68 E-value=6.8 Score=34.75 Aligned_cols=96 Identities=13% Similarity=0.091 Sum_probs=55.2
Q ss_pred EEEEEECCCceeeeeC-CCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC
Q 045735 237 VIISFDLSDEVIQEIE-SPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~-~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
.|..+|+.++++..+. ++...... ..+. .-+|++.+... ....+.||-++...+.....+........-+.+.++
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQV-TGVDWAPDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCE-EEEEEETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcc-cEEEEeCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC
Confidence 7888888887643332 22111111 1222 22566655544 567899999987666666554333322333445556
Q ss_pred CeEEEE-eeCCEEEEEeCCCCe
Q 045735 315 GEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 315 g~ill~-~~~~~~~~yd~~t~~ 335 (378)
+..++. ..++.+.+||+++++
T Consensus 108 ~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 108 EKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp SSEEEEEETTSSEEEEEEETTT
T ss_pred CCEEEEEeCCCEEEEEEecCCC
Confidence 666555 556778888888765
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=83.49 E-value=23 Score=31.13 Aligned_cols=73 Identities=10% Similarity=0.033 Sum_probs=45.7
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEECCeEEEE-e-eCCEEEEE--eCCCCeEEEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-S-SDGQLLLY--DPNAQEMRDLGL 341 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~-~~~~~~~y--d~~t~~~~~v~~ 341 (378)
+|+..++.. .....+.||.++. .....+..+........-+.+.++|+.++. . +++.+.+| |.++++++++..
T Consensus 250 dG~~l~v~~-~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 250 DGHFLYVSN-RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TSCEEEEEE-ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEEe-CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 676433332 2467899999985 556666555432222234566678875554 3 34667777 888999988865
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=83.46 E-value=23 Score=31.22 Aligned_cols=138 Identities=13% Similarity=0.026 Sum_probs=77.8
Q ss_pred ceeEEEEEcCCCCc-ccccCCCCCCCccccCCCceE--ECceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCC--
Q 045735 186 FSHIAVYNLSTDSW-RGFRGFKLGRDYVCGRIDSTY--WNGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPEL-- 259 (378)
Q Consensus 186 ~~~~~vyss~~~~W-~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~-- 259 (378)
.-.+.+++..++.- +.+... . .+..+. -+|.+|....... .|..+|+.+.+.. .++++.....
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~--~------~p~~i~~~~~g~lyv~~~~~~---~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGF--T------SPRYIHFLSDEKAYVTQIWDY---RIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECC--S------SEEEEEEEETTEEEEEEBSCS---EEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CCEEEEEECcccEEEEEcCCC--C------CCcEEEEeCCCeEEEEECCCC---eEEEEECCCCeEEEEEEcCCccccCC
Confidence 44678888887654 222211 1 112233 4888887763332 8999999987764 5666542110
Q ss_pred CcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEEeeC-----------CEEEE
Q 045735 260 THGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSD-----------GQLLL 328 (378)
Q Consensus 260 ~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~-----------~~~~~ 328 (378)
....+..-+|+|.+... .....+.++-++..+......+... ..-+.+.++|++++.... ..++.
T Consensus 132 ~p~~i~~~~~~lyv~~~-~~~~~v~viD~~t~~~~~~i~~g~~---p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCW-SYQNRILKIDTETDKVVDELTIGIQ---PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp BCCCEEEETTEEEEEEC-TTCCEEEEEETTTTEEEEEEECSSC---BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred CcceEEEECCEEEEEcC-CCCCEEEEEECCCCeEEEEEEcCCC---ccceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 11234446788877543 1245555554444433333222221 123455667888777432 57999
Q ss_pred EeCCCCeEEE
Q 045735 329 YDPNAQEMRD 338 (378)
Q Consensus 329 yd~~t~~~~~ 338 (378)
+|.+++++.+
T Consensus 208 id~~t~~v~~ 217 (328)
T 3dsm_A 208 IDAETFTVEK 217 (328)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9999998764
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.79 E-value=22 Score=30.48 Aligned_cols=186 Identities=10% Similarity=0.088 Sum_probs=97.2
Q ss_pred CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCccc
Q 045735 122 NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRG 201 (378)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 201 (378)
..+ .++||.++ ...+.... ....++.+|+..+ ++... . ....+.+|+..++..+.
T Consensus 50 ~~i-~~~~~~~~-~~~~~~~~----------~~~~~l~~~~dg~---l~v~~----~------~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 50 NRT-WAWSDDGQ-LSPEMHPS----------HHQNGHCLNKQGH---LIACS----H------GLRRLERQREPGGEWES 104 (296)
T ss_dssp TEE-EEEETTSC-EEEEESSC----------SSEEEEEECTTCC---EEEEE----T------TTTEEEEECSTTCCEEE
T ss_pred CEE-EEEECCCC-eEEEECCC----------CCcceeeECCCCc---EEEEe----c------CCCeEEEEcCCCCcEEE
Confidence 466 99999988 54443221 1235677777543 32221 1 13457778877776654
Q ss_pred ccCCCCCCCccccCCCceEE--CceEEEEeeec-------------CC-ccEEEEEECCCceeeeeCCCCCCCCCcccEE
Q 045735 202 FRGFKLGRDYVCGRIDSTYW--NGVCYWLAREE-------------GE-NHVIISFDLSDEVIQEIESPCTPELTHGPLG 265 (378)
Q Consensus 202 ~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~-------------~~-~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~ 265 (378)
........+ ......+.+ +|.+|...... .. ...|..+|.. .++..+.-. .. ....+.
T Consensus 105 ~~~~~~~~~--~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~-~~~gi~ 178 (296)
T 3e5z_A 105 IADSFEGKK--LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RV-KPNGLA 178 (296)
T ss_dssp EECEETTEE--CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CS-SEEEEE
T ss_pred EeeccCCCC--CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CC-CCccEE
Confidence 432100111 011123333 68877643210 00 1279999987 555444211 10 111222
Q ss_pred -EECCeEEEEEecCCCCEEEEEEEcC-Cee-EEEEEEcCCCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEEEE
Q 045735 266 -LYDNSLSLIALDEIKKCYQLWVLKE-RCW-IKQFTIGPFIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 266 -~~~g~L~~~~~~~~~~~~~IW~L~~-~~W-~~~~~i~~~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v~~ 341 (378)
.-+|++. +.. .....+.+|-++. ... .....+........-+.+..+|.+++.. .+.+..||++++.++.+..
T Consensus 179 ~s~dg~~l-v~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 179 FLPSGNLL-VSD-TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp ECTTSCEE-EEE-TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEEC
T ss_pred ECCCCCEE-EEe-CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEEC
Confidence 2256655 433 3567888888874 554 3333332111112235566688888777 7789999999877777654
No 45
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=81.94 E-value=25 Score=30.63 Aligned_cols=63 Identities=13% Similarity=0.124 Sum_probs=37.2
Q ss_pred CeEEEEEecCCCCEEEEEEEcC-C-eeEEEEEEcCC--CcceeceEEEECCeEEEE-eeCCEEEEEeCCC
Q 045735 269 NSLSLIALDEIKKCYQLWVLKE-R-CWIKQFTIGPF--IEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNA 333 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~-~-~W~~~~~i~~~--~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t 333 (378)
|++.+... ....+.||-++. . .......+... .....-+.+..++.+++. ..++.+.+||+.+
T Consensus 299 ~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEEC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEe--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 66655443 577899999987 2 12233344332 122333455567777665 5678899999864
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=81.44 E-value=24 Score=29.93 Aligned_cols=190 Identities=11% Similarity=0.118 Sum_probs=94.6
Q ss_pred eeecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccc
Q 045735 108 FVGPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYD 185 (378)
Q Consensus 108 ~~~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (378)
+....+|-+.+... ..+ .++||. ++...++.+.. .....++..|+... +... . . .
T Consensus 25 i~~d~~g~l~v~~~~~~~v-~~~~~~-~~~~~~~~~~~--------~~~~~~i~~~~~g~---l~v~-~---~------~ 81 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKI-SSLDQS-GRIKEFEVPTP--------DAKVMCLIVSSLGD---IWFT-E---N------G 81 (300)
T ss_dssp EEECTTSCEEEEETTTTEE-EEECTT-SCEEEEECSST--------TCCEEEEEECTTSC---EEEE-E---T------T
T ss_pred eeECCCCCEEEEcCCCCeE-EEECCC-CceEEEECCCC--------CCcceeEEECCCCC---EEEE-e---c------C
Confidence 44455676666653 356 899998 66655432211 12234566665432 2221 1 1 1
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCccc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGP 263 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (378)
.-.+..|+.. +..+.... +.......++.+ +|.+|....... .|..+|.. +++..+.+|.... ....
T Consensus 82 ~~~v~~~d~~-g~~~~~~~-----~~~~~~~~~i~~~~~g~l~v~~~~~~---~i~~~~~~-g~~~~~~~~~~~~-~~~~ 150 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPL-----PQPDSGPYGITEGLNGDIWFTQLNGD---RIGKLTAD-GTIYEYDLPNKGS-YPAF 150 (300)
T ss_dssp TTEEEEECTT-SCEEEEEC-----SSTTCCEEEEEECSTTCEEEEETTTT---EEEEECTT-SCEEEEECSSTTC-CEEE
T ss_pred CCeEEEECCC-CCeEEecC-----CCCCCCCccceECCCCCEEEEccCCC---eEEEECCC-CCEEEccCCCCCC-Ccee
Confidence 2345666665 54443321 100011133444 577766554333 89999998 6666665553221 1122
Q ss_pred EEE-ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceE--EEECCeEEEEee-CCEEEEEeCCCCeEEE
Q 045735 264 LGL-YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLG--LWKNGEIFLESS-DGQLLLYDPNAQEMRD 338 (378)
Q Consensus 264 l~~-~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~--~~~~g~ill~~~-~~~~~~yd~~t~~~~~ 338 (378)
+.. -+|+|.+... .... |++++. ..... ... + .....|.+ +.++|.+++... .+.+..||. ++++..
T Consensus 151 i~~d~~g~l~v~~~--~~~~--i~~~~~~g~~~~-~~~-~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 222 (300)
T 2qc5_A 151 ITLGSDNALWFTEN--QNNS--IGRITNTGKLEE-YPL-P-TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE 222 (300)
T ss_dssp EEECTTSSEEEEET--TTTE--EEEECTTCCEEE-EEC-S-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred EEECCCCCEEEEec--CCCe--EEEECCCCcEEE-eeC-C-CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE
Confidence 322 3577665443 2333 444443 33332 222 1 11234444 444678877753 457999999 555555
Q ss_pred E
Q 045735 339 L 339 (378)
Q Consensus 339 v 339 (378)
+
T Consensus 223 ~ 223 (300)
T 2qc5_A 223 Y 223 (300)
T ss_dssp E
T ss_pred E
Confidence 4
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=81.04 E-value=27 Score=30.68 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=56.3
Q ss_pred EEEEEECCCceeeeeC-CCCCCCCCcccEEEE--C--CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEE
Q 045735 237 VIISFDLSDEVIQEIE-SPCTPELTHGPLGLY--D--NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGL 311 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~--~--g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~ 311 (378)
.|..+|+.+++...+. +.... ....-+.+ + |.+.+... ....+.||-++...|.....+........-+.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 109 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred cEEEEecCCCcceeeeEecCCC--CcEEEEEeCCCCCCCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEEe
Confidence 5777777655444432 11111 11122222 2 66665554 467899999998778777766544333334455
Q ss_pred EEC--CeEEEE-eeCCEEEEEeCCCCe
Q 045735 312 WKN--GEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 312 ~~~--g~ill~-~~~~~~~~yd~~t~~ 335 (378)
..+ +.+++. ..++.+.+||++++.
T Consensus 110 ~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 110 APHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred CCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 555 666555 567889999998873
No 48
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=80.61 E-value=20 Score=30.38 Aligned_cols=108 Identities=9% Similarity=0.108 Sum_probs=59.2
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEc
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIG 300 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~ 300 (378)
+|.+|....... .|..+|. ++++..+.+|..... ...+.. -+|.|.+... ....+.+|-. +..... ....
T Consensus 151 ~g~l~v~~~~~~---~i~~~~~-~g~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~-~~~~ 221 (299)
T 2z2n_A 151 DNALWFTENQNN---AIGRITE-SGDITEFKIPTPASG-PVGITKGNDDALWFVEI--IGNKIGRITT-SGEITE-FKIP 221 (299)
T ss_dssp TSCEEEEETTTT---EEEEECT-TCCEEEEECSSTTCC-EEEEEECTTSSEEEEET--TTTEEEEECT-TCCEEE-EECS
T ss_pred CCCEEEEeCCCC---EEEEEcC-CCcEEEeeCCCCCCc-ceeEEECCCCCEEEEcc--CCceEEEECC-CCcEEE-EECC
Confidence 577776554332 7999999 777776655543211 122222 2577765443 3445555543 233322 2222
Q ss_pred CCCcceec--eEEEECCeEEEEe-eCCEEEEEeCCCCeEEEEEE
Q 045735 301 PFIEAYNP--LGLWKNGEIFLES-SDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 301 ~~~~~~~~--~~~~~~g~ill~~-~~~~~~~yd~~t~~~~~v~~ 341 (378)
.....| +.+.++|.+++.. ..+.+..||+ +++++.+..
T Consensus 222 --~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~ 262 (299)
T 2z2n_A 222 --TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPI 262 (299)
T ss_dssp --STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEEC
T ss_pred --CCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeC
Confidence 112334 3444578877765 4578999999 566666543
No 49
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.96 E-value=14 Score=32.28 Aligned_cols=112 Identities=13% Similarity=0.169 Sum_probs=59.0
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTI 299 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i 299 (378)
+|.+||...... .|..+|..+.++..+..+.. .....+.. -+|+|.+.........-.|++++. ..... ..+
T Consensus 55 ~g~l~~~~~~~~---~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~~ 128 (333)
T 2dg1_A 55 QGQLFLLDVFEG---NIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-DII 128 (333)
T ss_dssp TSCEEEEETTTC---EEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-EEE
T ss_pred CCCEEEEECCCC---EEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-EEE
Confidence 688888765443 79999999888766532211 11122322 367777655421111123444443 11111 112
Q ss_pred cCC-C-cceeceEEEECCeEEEEee-------CCEEEEEeCCCCeEEEE
Q 045735 300 GPF-I-EAYNPLGLWKNGEIFLESS-------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 300 ~~~-~-~~~~~~~~~~~g~ill~~~-------~~~~~~yd~~t~~~~~v 339 (378)
... . ....-+.+.++|.+++... ...++.||.++++++.+
T Consensus 129 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 129 EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111 1 1122244556788877654 25799999988777655
No 50
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.83 E-value=38 Score=30.77 Aligned_cols=187 Identities=8% Similarity=-0.002 Sum_probs=92.5
Q ss_pred cceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEE
Q 045735 113 EGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVY 192 (378)
Q Consensus 113 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (378)
.+.|++.....+ ...++.+++...+-.. .....++.+|+..+. +.... . ..-.+..+
T Consensus 87 ~~~l~~~~~~~I-~~i~~~~~~~~~~~~~----------~~~~~gl~~d~~~~~--ly~~D---~-------~~~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFANRIDI-RQVLPHRSEYTLLLNN----------LENAIALDFHHRREL--VFWSD---V-------TLDRILRA 143 (386)
T ss_dssp CCEEEEECBSCE-EEECTTSCCCEEEECS----------CSCEEEEEEETTTTE--EEEEE---T-------TTTEEEEE
T ss_pred cceeEeecCccc-eeeccCCCcEEEEecC----------CCccEEEEEecCCCe--EEEEe---C-------CCCcEEEE
Confidence 566766666666 7777766554433211 123467888876542 32221 1 13456666
Q ss_pred EcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEE--
Q 045735 193 NLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLY-- 267 (378)
Q Consensus 193 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~-- 267 (378)
+..++..+.+... .+ ..+.++.+ +|.+||...... .|..+|+....-..+. .... .....+..-
T Consensus 144 ~~~g~~~~~~~~~--~~----~~p~glavd~~~g~lY~~d~~~~---~I~~~~~dg~~~~~l~-~~~l-~~P~giavdp~ 212 (386)
T 3v65_B 144 NLNGSNVEEVVST--GL----ESPGGLAVDWVHDKLYWTDSGTS---RIEVANLDGAHRKVLL-WQSL-EKPRAIALHPM 212 (386)
T ss_dssp ETTSCCEEEEECS--SC----SCCCCEEEETTTTEEEEEETTTT---EEEECBTTSCSCEEEE-CSSC-SCEEEEEEETT
T ss_pred ecCCCCcEEEEeC--CC----CCccEEEEEeCCCeEEEEcCCCC---eEEEEeCCCCceEEee-cCCC-CCCcEEEEEcC
Confidence 7666544333211 11 11244444 589999876654 7999998765433321 1111 111223332
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceE--EE-ECCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLG--LW-KNGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~--~~-~~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
+|.|.+.... . .-.|++.+- ..-.+. .+. ..+..|.+ +. .++.|++.. ..+.+..+|++....+.+
T Consensus 213 ~g~ly~td~~--~-~~~I~r~~~dG~~~~~-~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 213 EGTIYWTDWG--N-TPRIEASSMDGSGRRI-IAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp TTEEEEEECS--S-SCEEEEEETTSCSCEE-EEC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred CCeEEEeccC--C-CCEEEEEeCCCCCcEE-EEE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 5677665431 1 234555543 221111 111 12344544 33 246666653 355788888876554443
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=78.81 E-value=22 Score=31.58 Aligned_cols=182 Identities=14% Similarity=0.110 Sum_probs=79.3
Q ss_pred CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCC-cc
Q 045735 122 NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDS-WR 200 (378)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~-W~ 200 (378)
..+ .|||..++++..+-..... ......+.+.|.. .+ ++.. .. .-.+.+|+..++. |+
T Consensus 33 ~~i-~iw~~~~~~~~~~~~~~~h-------~~~v~~~~~s~~~-~~--l~s~---s~-------d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 33 NQV-ELYEQDGNGWKHARTFSDH-------DKIVTCVDWAPKS-NR--IVTC---SQ-------DRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SCB-CEEEEETTEEEECCCBCCC-------SSCEEEEEECTTT-CC--EEEE---ET-------TSSEEEC------CCC
T ss_pred CEE-EEEEccCCceEEEEEEecC-------CceEEEEEEeCCC-CE--EEEE---eC-------CCeEEEEEcCCCCcee
Confidence 356 9999998754433222211 1233455666653 22 2221 11 3457888887766 55
Q ss_pred cccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCce----eeeeCCCCCCCCCcccEE-EECCeEEE
Q 045735 201 GFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEV----IQEIESPCTPELTHGPLG-LYDNSLSL 273 (378)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~l~-~~~g~L~~ 273 (378)
........-... .++.+ +|........+. .|..+|+.+.+ ...+..|.. ..-..+. .-+|++.+
T Consensus 92 ~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 92 QTLVLLRLNRAA----TFVRWSPNEDKFAVGSGAR---VISVCYFEQENDWWVSKHLKRPLR--STILSLDWHPNNVLLA 162 (377)
T ss_dssp CEEECCCCSSCE----EEEECCTTSSCCEEEESSS---CEEECCC-----CCCCEEECSSCC--SCEEEEEECTTSSEEE
T ss_pred eeeEecccCCce----EEEEECCCCCEEEEEecCC---eEEEEEECCcccceeeeEeecccC--CCeEEEEEcCCCCEEE
Confidence 443211000000 12222 344333333332 68888887765 333433211 1101121 12566555
Q ss_pred EEecCCCCEEEEEEEcC---------Cee-------EEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeE
Q 045735 274 IALDEIKKCYQLWVLKE---------RCW-------IKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEM 336 (378)
Q Consensus 274 ~~~~~~~~~~~IW~L~~---------~~W-------~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~ 336 (378)
... ....+.||-+.. ..| .....+ .......-+.+.++|..++. ..++.+.+||+++++.
T Consensus 163 ~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 163 AGC--ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEE--SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEe--CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 444 467899999853 112 122222 11111223444557776554 5677899999988763
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=78.71 E-value=30 Score=29.81 Aligned_cols=102 Identities=10% Similarity=0.045 Sum_probs=57.2
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEc
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIG 300 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~ 300 (378)
+|.+||...... .|..+|..+.+...+..|... ..+. .-+|+|.+.. ...+.+|-.+...........
T Consensus 24 ~~~l~~~d~~~~---~i~~~d~~~~~~~~~~~~~~~----~~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 24 SNSLLFVDIPAK---KVCRWDSFTKQVQRVTMDAPV----SSVALRQSGGYVATI----GTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp TTEEEEEETTTT---EEEEEETTTCCEEEEECSSCE----EEEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCCC---EEEEEECCCCcEEEEeCCCce----EEEEECCCCCEEEEE----CCeEEEEECCCCcEEEEEecC
Confidence 479999876654 899999998877766665332 1222 2367754432 234444433335554444332
Q ss_pred CCCcceec--eEEEECCeEEEEee------------CCEEEEEeCCCC
Q 045735 301 PFIEAYNP--LGLWKNGEIFLESS------------DGQLLLYDPNAQ 334 (378)
Q Consensus 301 ~~~~~~~~--~~~~~~g~ill~~~------------~~~~~~yd~~t~ 334 (378)
......++ +.+.++|.+++... .+.++.+|.+.+
T Consensus 93 ~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 140 (297)
T 3g4e_A 93 NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH 140 (297)
T ss_dssp TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC
T ss_pred CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC
Confidence 21112233 44556788777531 236888887643
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=77.44 E-value=43 Score=30.61 Aligned_cols=58 Identities=7% Similarity=0.023 Sum_probs=31.3
Q ss_pred CCCEEEEEEEcCCeeEEEEEEc-CC-CcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEE
Q 045735 279 IKKCYQLWVLKERCWIKQFTIG-PF-IEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 279 ~~~~~~IW~L~~~~W~~~~~i~-~~-~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~ 338 (378)
....+.||-..... .+..+. +. ..+.....+.++|.++....++.+.+||+++++.++
T Consensus 376 ~~~~i~iwd~~~g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 376 ELRTIDVFDGNSGK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCCEEEECSSSCC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCCEEEEEECCCCc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 34578899665422 222222 22 122333345668888777667889999999987653
No 54
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=77.25 E-value=34 Score=29.30 Aligned_cols=65 Identities=23% Similarity=0.273 Sum_probs=43.5
Q ss_pred CeEEEEEecCCCCEEEEEEEcC-------CeeEEEEEEcCCCcceeceEEEEC--CeEEEE-eeCCEEEEEeCCCCe
Q 045735 269 NSLSLIALDEIKKCYQLWVLKE-------RCWIKQFTIGPFIEAYNPLGLWKN--GEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~-------~~W~~~~~i~~~~~~~~~~~~~~~--g~ill~-~~~~~~~~yd~~t~~ 335 (378)
|.+.+... ....+.||-++. ..|.....+........-+.+..+ +..++. ..++.+.+||+++++
T Consensus 71 ~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASAS--YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEE--TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCEEEEEc--CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 66665554 567899999976 356777766544333334455555 676655 567889999998765
No 55
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.98 E-value=33 Score=28.57 Aligned_cols=198 Identities=12% Similarity=-0.011 Sum_probs=92.2
Q ss_pred cccce-EEEEeCCceEEEEeccc-cceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccccee
Q 045735 111 PYEGI-FCLMNGNKYISLWNLAT-QELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSH 188 (378)
Q Consensus 111 s~~GL-ll~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (378)
+-+|- ++......+ +++|..+ ++...+...... .....+.+.|.. .+ ++... ... .....
T Consensus 50 spdg~~l~~~~~~~i-~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spdg-~~-l~~~~--~~~-----~~~~~ 111 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLL-YRLSLAGDPSPEKVDTGFAT--------ICNNDHGISPDG-AL-YAISD--KVE-----FGKSA 111 (297)
T ss_dssp CTTSSEEEEEETTEE-EEEESSSCCSCEECCCTTCC--------CBCSCCEECTTS-SE-EEEEE--CTT-----TSSCE
T ss_pred CCCCCEEEEEcCCeE-EEEeCCCCCCceEecccccc--------ccccceEECCCC-CE-EEEEE--eCC-----CCcce
Confidence 33444 333344566 9999999 877766533211 111234445543 22 22221 001 02455
Q ss_pred EEEEEcCCCCcccccCCCCCCCccccCCCceEECce-EEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-E
Q 045735 189 IAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGV-CYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-L 266 (378)
Q Consensus 189 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~ 266 (378)
+.+++..++.-+.+.... .... ....-+|. +++....+. ...|..+|..+.+...+..... .. ..+. .
T Consensus 112 l~~~~~~~~~~~~~~~~~---~~~~---~~~spdg~~l~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~s 181 (297)
T 2ojh_A 112 IYLLPSTGGTPRLMTKNL---PSYW---HGWSPDGKSFTYCGIRDQ-VFDIYSMDIDSGVETRLTHGEG--RN-DGPDYS 181 (297)
T ss_dssp EEEEETTCCCCEECCSSS---SEEE---EEECTTSSEEEEEEEETT-EEEEEEEETTTCCEEECCCSSS--CE-EEEEEC
T ss_pred EEEEECCCCceEEeecCC---Cccc---eEECCCCCEEEEEECCCC-ceEEEEEECCCCcceEcccCCC--cc-ccceEC
Confidence 666666665544433211 1000 01111454 333333322 1357777777666554432111 11 1111 2
Q ss_pred ECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEE-eeC-----------CEEEEEeCC
Q 045735 267 YDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSD-----------GQLLLYDPN 332 (378)
Q Consensus 267 ~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~-----------~~~~~yd~~ 332 (378)
-+|+..++.. .....+.||.++. ... ..+.........+.+.++|+.++. ..+ ..++.||++
T Consensus 182 ~dg~~l~~~~-~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 182 PDGRWIYFNS-SRTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp TTSSEEEEEE-CTTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCCCEEEEEe-cCCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 2666544443 2356789999874 222 222222212223444557765443 322 469999999
Q ss_pred CCeEEEEE
Q 045735 333 AQEMRDLG 340 (378)
Q Consensus 333 t~~~~~v~ 340 (378)
+++.+.+.
T Consensus 258 ~~~~~~~~ 265 (297)
T 2ojh_A 258 GGNVETLF 265 (297)
T ss_dssp SCSCEEEE
T ss_pred CCCceeee
Confidence 98876654
No 56
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=75.76 E-value=40 Score=30.97 Aligned_cols=115 Identities=12% Similarity=0.105 Sum_probs=63.4
Q ss_pred CceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC-Cee
Q 045735 217 DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE-RCW 293 (378)
Q Consensus 217 ~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W 293 (378)
.++.+ +|.+||...... .|..+|+.+.+...+..... .. .....-+|+..++....... .||+++. ..|
T Consensus 134 ~~la~d~~g~lyv~d~~~~---~I~~id~~~g~~~~~~~~~~--~~-~ia~~~~g~~l~~~d~~~~~--~I~~~d~~~~~ 205 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDP---RVRLISVDDNKVTTVHPGFK--GG-KPAVTKDKQRVYSIGWEGTH--TVYVYMKASGW 205 (409)
T ss_dssp EEEEECSTTEEEEEETTTT---EEEEEETTTTEEEEEEETCC--BC-BCEECTTSSEEEEEBSSTTC--EEEEEEGGGTT
T ss_pred eEEEEeCCCCEEEEecCCC---cEEEEECCCCEEEEeeccCC--CC-ceeEecCCCcEEEEecCCCc--eEEEEEcCCCc
Confidence 34444 689999876543 89999999887766532211 11 11112244433333211222 6777766 444
Q ss_pred EE--EEEEcC-CCcceeceEEEE-CCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 294 IK--QFTIGP-FIEAYNPLGLWK-NGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 294 ~~--~~~i~~-~~~~~~~~~~~~-~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
.. .-.+.. ......-+++.+ +|.+++....+.++.||+++++...+
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 32 111112 111122355666 68888865567899999998876555
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=75.34 E-value=38 Score=28.98 Aligned_cols=69 Identities=14% Similarity=0.220 Sum_probs=41.5
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
+|++.+... ....+.+|-++.........+........-+.+.+++..++. ..++.+.+||+++++...
T Consensus 108 ~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGG--EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEE--SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEc--CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 565555444 567999998887544444444433222233445556666555 557789999999886543
No 58
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.66 E-value=13 Score=34.17 Aligned_cols=188 Identities=11% Similarity=0.103 Sum_probs=85.4
Q ss_pred eEEEEeC-CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEE
Q 045735 115 IFCLMNG-NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYN 193 (378)
Q Consensus 115 Lll~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 193 (378)
+|..... ..+ .|||..+++...+-..... ......+.|.|..+.+-+ .. .. .-.+.+++
T Consensus 134 ~lasGs~dg~i-~lWd~~~~~~~~~~~~~gH-------~~~V~~l~f~p~~~~~l~-s~----s~-------D~~v~iwd 193 (435)
T 4e54_B 134 TVAVGSKGGDI-MLWNFGIKDKPTFIKGIGA-------GGSITGLKFNPLNTNQFY-AS----SM-------EGTTRLQD 193 (435)
T ss_dssp CEEEEETTSCE-EEECSSCCSCCEEECCCSS-------SCCCCEEEECSSCTTEEE-EE----CS-------SSCEEEEE
T ss_pred EEEEEeCCCEE-EEEECCCCCceeEEEccCC-------CCCEEEEEEeCCCCCEEE-EE----eC-------CCEEEEee
Confidence 4433333 355 9999988765432111110 122345666665544422 21 11 23567788
Q ss_pred cCCCCcccccCCCCCCCccccCCCceE--ECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEE--CC
Q 045735 194 LSTDSWRGFRGFKLGRDYVCGRIDSTY--WNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLY--DN 269 (378)
Q Consensus 194 s~~~~W~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~g 269 (378)
.+++.-+...... .... .. .++. -+|.+......++ .|..+|+.+.....+.. . .....-+.+ +|
T Consensus 194 ~~~~~~~~~~~~~-~~~~-~~--~~~~~~~~~~~l~~g~~dg---~i~~wd~~~~~~~~~~~--h--~~~v~~v~~~p~~ 262 (435)
T 4e54_B 194 FKGNILRVFASSD-TINI-WF--CSLDVSASSRMVVTGDNVG---NVILLNMDGKELWNLRM--H--KKKVTHVALNPCC 262 (435)
T ss_dssp TTSCEEEEEECCS-SCSC-CC--CCEEEETTTTEEEEECSSS---BEEEEESSSCBCCCSBC--C--SSCEEEEEECTTC
T ss_pred ccCCceeEEeccC-CCCc-cE--EEEEECCCCCEEEEEeCCC---cEeeeccCcceeEEEec--c--cceEEeeeecCCC
Confidence 7766544332210 0000 00 2222 2454444433333 68888987654433221 1 111111222 33
Q ss_pred e-EEEEEecCCCCEEEEEEEcCCeeEEEEE-EcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCe
Q 045735 270 S-LSLIALDEIKKCYQLWVLKERCWIKQFT-IGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 270 ~-L~~~~~~~~~~~~~IW~L~~~~W~~~~~-i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~ 335 (378)
. +.+... .+..+.||-+....-..... ......-..-+.+..+|..++. ..++.+.+||+++.+
T Consensus 263 ~~~~~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 263 DWFLATAS--VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp SSEEEEEE--TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred ceEEEEec--CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 3 443333 56788999776511000000 0001111112233457776665 457789999998865
No 59
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=74.14 E-value=48 Score=29.50 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=58.6
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEc--C--C
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLK--E--R 291 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~--~--~ 291 (378)
..+..+|.+|...... .|.+||..+++.. ..+++.... ......+|.+.+... .. .|+.++ + .
T Consensus 98 ~~~~~~~~v~v~~~~g----~l~a~d~~tG~~~W~~~~~~~~~---~~p~~~~~~v~v~~~---~g--~l~~~d~~tG~~ 165 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKA----QVYALNTSDGTVAWQTKVAGEAL---SRPVVSDGLVLIHTS---NG--QLQALNEADGAV 165 (376)
T ss_dssp EEEEETTEEEEEETTS----EEEEEETTTCCEEEEEECSSCCC---SCCEEETTEEEEECT---TS--EEEEEETTTCCE
T ss_pred CceEeCCEEEEEcCCC----EEEEEECCCCCEEEEEeCCCceE---cCCEEECCEEEEEcC---CC--eEEEEECCCCcE
Confidence 4566788888765443 8999999765432 234443221 122334666555322 22 344444 2 4
Q ss_pred eeEEEEEEcCC--CcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 292 CWIKQFTIGPF--IEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 292 ~W~~~~~i~~~--~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
.|.....-... .....|.. .++.+++...++.++.||.++++...-
T Consensus 166 ~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 166 KWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp EEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 56553311110 00122322 267776666677899999999876543
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=74.00 E-value=31 Score=30.29 Aligned_cols=70 Identities=6% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
+|++.++.. ....+.||-++...|.....+........-+.+.+++..++. ..++.+.+||+++++....
T Consensus 19 ~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 19 DRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp TSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 555555443 577999999988777777777644333344555667776665 5577899999999875543
No 61
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=73.89 E-value=74 Score=31.60 Aligned_cols=188 Identities=10% Similarity=0.115 Sum_probs=92.8
Q ss_pred cccc-eEEEEeCC-ceEEEEeccccceec-CCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccce
Q 045735 111 PYEG-IFCLMNGN-KYISLWNLATQELRR-LPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFS 187 (378)
Q Consensus 111 s~~G-Lll~~~~~-~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (378)
+.+| +|.....+ .+ .|||..+++... +.... .....+.+.|... + + ... .. ..
T Consensus 64 s~~~~~l~~~~~dg~i-~vw~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~-~-l-~~~---~~-------dg 119 (814)
T 3mkq_A 64 IARKNWIIVGSDDFRI-RVFNYNTGEKVVDFEAHP----------DYIRSIAVHPTKP-Y-V-LSG---SD-------DL 119 (814)
T ss_dssp EGGGTEEEEEETTSEE-EEEETTTCCEEEEEECCS----------SCEEEEEECSSSS-E-E-EEE---ET-------TS
T ss_pred eCCCCEEEEEeCCCeE-EEEECCCCcEEEEEecCC----------CCEEEEEEeCCCC-E-E-EEE---cC-------CC
Confidence 3344 34444443 55 999998887653 32111 1234455555432 2 2 221 11 34
Q ss_pred eEEEEEcCCCCcccccCCCCCCCccccCC-CceEE---CceEEEEeeecCCccEEEEEECCCceeee-eCCCCCCCCCcc
Q 045735 188 HIAVYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQE-IESPCTPELTHG 262 (378)
Q Consensus 188 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 262 (378)
.+.+|+..++ |...... .. .... .++.+ +|........++ .|..+|+.+.+... +....... .
T Consensus 120 ~i~vw~~~~~-~~~~~~~----~~-~~~~v~~~~~~p~~~~~l~~~~~dg---~v~vwd~~~~~~~~~~~~~~~~~---v 187 (814)
T 3mkq_A 120 TVKLWNWENN-WALEQTF----EG-HEHFVMCVAFNPKDPSTFASGCLDR---TVKVWSLGQSTPNFTLTTGQERG---V 187 (814)
T ss_dssp EEEEEEGGGT-SEEEEEE----EC-CSSCEEEEEEETTEEEEEEEEETTS---EEEEEETTCSSCSEEEECCCTTC---C
T ss_pred EEEEEECCCC-ceEEEEE----cC-CCCcEEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCcceeEEecCCCCC---E
Confidence 6788887665 2211110 00 0011 22333 344444444333 79999987654322 22221111 1
Q ss_pred cEEEE----CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 263 PLGLY----DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 263 ~l~~~----~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
..... +|.+.+... ....+.+|-+.... ....+........-+.+.++|.+++. ..++.+.+||+.+++..
T Consensus 188 ~~~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp CEEEECCSTTCCEEEEEC--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred EEEEEEECCCCCEEEEEe--CCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 22222 565555443 56789999776532 23333322222333455567776665 45778999999987644
Q ss_pred E
Q 045735 338 D 338 (378)
Q Consensus 338 ~ 338 (378)
.
T Consensus 264 ~ 264 (814)
T 3mkq_A 264 K 264 (814)
T ss_dssp E
T ss_pred E
Confidence 3
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=73.40 E-value=45 Score=28.91 Aligned_cols=71 Identities=7% Similarity=0.065 Sum_probs=43.5
Q ss_pred CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEEEE
Q 045735 269 NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v~~ 341 (378)
|.+.+... ....+.||-++.........+.....-..-+.+..++..++. ..++.+.+||+++++...+..
T Consensus 54 g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 54 GNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp SEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc
Confidence 46555544 567899999986222332333322222233445557776665 557889999999998766543
No 63
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=72.25 E-value=50 Score=28.91 Aligned_cols=104 Identities=10% Similarity=0.155 Sum_probs=58.6
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTI 299 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i 299 (378)
+|.+||...... .|..+|..+++...+..|... ......-+|++.+... .. |++++. .........
T Consensus 60 ~~~l~~~d~~~~---~i~~~d~~~~~~~~~~~~~~v---~~i~~~~dg~l~v~~~----~g--l~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 60 SGTAWWFNILER---ELHELHLASGRKTVHALPFMG---SALAKISDSKQLIASD----DG--LFLRDTATGVLTLHAEL 127 (326)
T ss_dssp TTEEEEEEGGGT---EEEEEETTTTEEEEEECSSCE---EEEEEEETTEEEEEET----TE--EEEEETTTCCEEEEECS
T ss_pred CCEEEEEECCCC---EEEEEECCCCcEEEEECCCcc---eEEEEeCCCeEEEEEC----CC--EEEEECCCCcEEEEeeC
Confidence 378999876654 899999999888776665321 1112234788766432 23 555543 444332221
Q ss_pred cCCCcceec--eEEEECCeEEEEee-------CCEEEEEeCCCCeEEEE
Q 045735 300 GPFIEAYNP--LGLWKNGEIFLESS-------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 300 ~~~~~~~~~--~~~~~~g~ill~~~-------~~~~~~yd~~t~~~~~v 339 (378)
........+ +.+..+|.+++... ...++.|| +++++.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 111111222 44556788777542 24788898 5666654
No 64
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=70.89 E-value=55 Score=28.77 Aligned_cols=98 Identities=9% Similarity=0.089 Sum_probs=52.6
Q ss_pred EEEEEECCCceeeeeC-CCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEE
Q 045735 237 VIISFDLSDEVIQEIE-SPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~-~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~ 313 (378)
.|..+|..++.+..+. +....... ..+. .-+|++.+... ....+.||-++. ..+.....+........-+.+.+
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v-~~v~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEV-KSVAWAPSGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCE-EEEEECTTSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCc-eEEEEeCCCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 5667777666554332 22111110 1111 12566555444 567899999987 55555555543322223344455
Q ss_pred CCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 314 NGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 314 ~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
++.+++. ..++.+.+||.+++++.
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEEecCCCEE
Confidence 6666555 45667888888877654
No 65
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=70.83 E-value=50 Score=28.33 Aligned_cols=204 Identities=12% Similarity=0.124 Sum_probs=100.5
Q ss_pred ecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccce
Q 045735 110 GPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFS 187 (378)
Q Consensus 110 ~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (378)
...+|-|++.+. ..+ +.++|.|++...+.... ...++.+++..+ ++.. . ..
T Consensus 21 ~~~~~~l~~~d~~~~~i-~~~d~~~~~~~~~~~~~-----------~~~~i~~~~dG~---l~v~-~-----------~~ 73 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKV-CRWDSFTKQVQRVTMDA-----------PVSSVALRQSGG---YVAT-I-----------GT 73 (297)
T ss_dssp ETTTTEEEEEETTTTEE-EEEETTTCCEEEEECSS-----------CEEEEEEBTTSS---EEEE-E-----------TT
T ss_pred ECCCCEEEEEECCCCEE-EEEECCCCcEEEEeCCC-----------ceEEEEECCCCC---EEEE-E-----------CC
Confidence 344555555542 366 99999998765442211 123566676544 2221 1 23
Q ss_pred eEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecC--------CccEEEEEECCCceeeee---CCC
Q 045735 188 HIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEG--------ENHVIISFDLSDEVIQEI---ESP 254 (378)
Q Consensus 188 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~--------~~~~il~fD~~~e~~~~i---~~P 254 (378)
.+.+|+..++.++.+.......+.. ....+.+ +|.+|.-..... ....|..+|.....-... ..|
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~--~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p 151 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNN--RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS 151 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSE--EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE
T ss_pred eEEEEECCCCcEEEEEecCCCCCCC--CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc
Confidence 5678888888776654321111111 0122333 688666543321 013788888764322211 111
Q ss_pred CCCCCCcccEE-EECCe-EEEEEecCCCCEEEEEEEc-C-CeeEEEEEE-cCCCcceec--eEEEECCeEEEEe-eCCEE
Q 045735 255 CTPELTHGPLG-LYDNS-LSLIALDEIKKCYQLWVLK-E-RCWIKQFTI-GPFIEAYNP--LGLWKNGEIFLES-SDGQL 326 (378)
Q Consensus 255 ~~~~~~~~~l~-~~~g~-L~~~~~~~~~~~~~IW~L~-~-~~W~~~~~i-~~~~~~~~~--~~~~~~g~ill~~-~~~~~ 326 (378)
..+. .-+|+ |.+... ....+.+|-++ + ........+ ........| +.+..+|.+++.. ..+.+
T Consensus 152 -------ngi~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 152 -------NGLDWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp -------EEEEECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred -------cceEEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 1122 12454 444333 35566666664 2 333222111 111111234 4455578888875 45679
Q ss_pred EEEeCCCCeE-EEEEEeceeEEEEEe
Q 045735 327 LLYDPNAQEM-RDLGLRGLWFYVHCF 351 (378)
Q Consensus 327 ~~yd~~t~~~-~~v~~~~~~~~~~~y 351 (378)
..||++++++ ..+.........+.|
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred EEEcCCCceEEEEEECCCCCceEEEE
Confidence 9999997664 455443222333444
No 66
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=69.95 E-value=51 Score=28.04 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=68.2
Q ss_pred eEECceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEE
Q 045735 219 TYWNGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQF 297 (378)
Q Consensus 219 v~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~ 297 (378)
.+.+|.+|--+...+ +..|..+|+.+++. ..+++|..... -.+...+++|.+... .... +|+.+-..-..+.
T Consensus 27 ~~~~~~LyestG~~g-~S~v~~vD~~tgkv~~~~~l~~~~fg--eGi~~~~~~ly~ltw--~~~~--v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 27 FYLRGHLYESTGETG-RSSVRKVDLETGRILQRAEVPPPYFG--AGIVAWRDRLIQLTW--RNHE--GFVYDLATLTPRA 99 (243)
T ss_dssp EEETTEEEEEECCTT-SCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEES--SSSE--EEEEETTTTEEEE
T ss_pred EEECCEEEEECCCCC-CceEEEEECCCCCEEEEEeCCCCcce--eEEEEeCCEEEEEEe--eCCE--EEEEECCcCcEEE
Confidence 344566776554431 13899999988755 56777765322 235556888887653 3443 4555543445555
Q ss_pred EEcCCCcceeceEEEECC-eEEEEeeCCEEEEEeCCCCeE-EEEEE
Q 045735 298 TIGPFIEAYNPLGLWKNG-EIFLESSDGQLLLYDPNAQEM-RDLGL 341 (378)
Q Consensus 298 ~i~~~~~~~~~~~~~~~g-~ill~~~~~~~~~yd~~t~~~-~~v~~ 341 (378)
+|.... ...++..++ .+++..++.++..+|++|.+. ++|..
T Consensus 100 ti~~~~---~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 100 RFRYPG---EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEECSS---CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEeCCC---CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 565422 345665554 466666678899999999654 44443
No 67
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=69.63 E-value=61 Score=28.87 Aligned_cols=187 Identities=10% Similarity=0.019 Sum_probs=92.6
Q ss_pred cceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEE
Q 045735 113 EGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVY 192 (378)
Q Consensus 113 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (378)
.+.|++.....+ ...++.+.+...+-.. .....++.+|+..+ ++.... . ..-.+..+
T Consensus 44 ~~~ll~~~~~~I-~~i~~~g~~~~~~~~~----------~~~~~~l~~d~~~~--~ly~~D---~-------~~~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFANRIDI-RQVLPHRSEYTLLLNN----------LENAIALDFHHRRE--LVFWSD---V-------TLDRILRA 100 (349)
T ss_dssp CCEEEEECBSCE-EEECTTSCCEEEEECS----------CSCEEEEEEETTTT--EEEEEE---T-------TTTEEEEE
T ss_pred CceeEeecccce-EEEeCCCCeeEEeecC----------CCceEEEEEecccc--EEEEEe---c-------cCCceEEE
Confidence 566777766666 7777766555433111 12346788887654 232221 1 13456666
Q ss_pred EcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEE--
Q 045735 193 NLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLY-- 267 (378)
Q Consensus 193 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~-- 267 (378)
+..+..-+.+... .+ ..+.++.+ +|.+||...... .|..+|+....-..+. ..... ....+..-
T Consensus 101 ~~~g~~~~~~~~~--~~----~~p~glavd~~~g~ly~~d~~~~---~I~~~~~dG~~~~~l~-~~~l~-~P~~iavdp~ 169 (349)
T 3v64_C 101 NLNGSNVEEVVST--GL----ESPGGLAVDWVHDKLYWTDSGTS---RIEVANLDGAHRKVLL-WQSLE-KPRAIALHPM 169 (349)
T ss_dssp ETTSCSCEEEECS--SC----SCCCEEEEETTTTEEEEEETTTT---EEEEEETTSCSCEEEE-CTTCS-CEEEEEEETT
T ss_pred ecCCCCceEEEeC--CC----CCccEEEEecCCCeEEEEcCCCC---eEEEEcCCCCceEEEE-eCCCC-CcceEEEecC
Confidence 6665543332110 11 11244444 689999976654 8999999765433332 11111 11233332
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEE--E-ECCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGL--W-KNGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~--~-~~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
+|.|.+.... . .-.|++.+- ..-.+ .+- ...+..|.++ . .++.+++.. ..+.+..+|++....+.+
T Consensus 170 ~g~ly~td~~--~-~~~I~r~~~dG~~~~--~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 170 EGTIYWTDWG--N-TPRIEASSMDGSGRR--IIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp TTEEEEEECS--S-SCEEEEEETTSCSCE--ESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCeEEEeccC--C-CCEEEEEeCCCCCcE--EEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 5667665432 2 134455442 21111 111 1224455443 3 256666653 355788888876554443
No 68
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=69.30 E-value=61 Score=28.68 Aligned_cols=177 Identities=7% Similarity=0.027 Sum_probs=89.3
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccc
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGF 202 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 202 (378)
.+ .|+|..+++....-... .....+.++|..+ + ++... .. ...+.+|+..++.-...
T Consensus 13 ~v-~v~d~~~~~~~~~~~~~----------~~~~~~~~s~dg~-~-l~~~~---~~-------d~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 13 NI-SVIDVTSNKVTATIPVG----------SNPMGAVISPDGT-K-VYVAN---AH-------SNDVSIIDTATNNVIAT 69 (391)
T ss_dssp EE-EEEETTTTEEEEEEECS----------SSEEEEEECTTSS-E-EEEEE---GG-------GTEEEEEETTTTEEEEE
T ss_pred EE-EEEECCCCeEEEEeecC----------CCcceEEECCCCC-E-EEEEC---CC-------CCeEEEEECCCCeEEEE
Confidence 55 99999988765421111 1124556666432 2 21221 11 34678888877653322
Q ss_pred cCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeee-eCCCCCCCCCcccEE-EECCeEEEEEecC
Q 045735 203 RGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQE-IESPCTPELTHGPLG-LYDNSLSLIALDE 278 (378)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~-~~~g~L~~~~~~~ 278 (378)
-... . . ..++.+ +|..-+....... .|..+|+.+.+... +..... ...+. .-+|+..++.. .
T Consensus 70 ~~~~-~-~-----v~~~~~spdg~~l~~~~~~~~--~v~v~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~-~ 135 (391)
T 1l0q_A 70 VPAG-S-S-----PQGVAVSPDGKQVYVTNMASS--TLSVIDTTSNTVAGTVKTGKS----PLGLALSPDGKKLYVTN-N 135 (391)
T ss_dssp EECS-S-S-----EEEEEECTTSSEEEEEETTTT--EEEEEETTTTEEEEEEECSSS----EEEEEECTTSSEEEEEE-T
T ss_pred EECC-C-C-----ccceEECCCCCEEEEEECCCC--EEEEEECCCCeEEEEEeCCCC----cceEEECCCCCEEEEEe-C
Confidence 1110 0 0 022322 4553333332222 89999998876543 332211 11222 22565443333 3
Q ss_pred CCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEE-EE-eeCCEEEEEeCCCCeEEEE
Q 045735 279 IKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIF-LE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 279 ~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~il-l~-~~~~~~~~yd~~t~~~~~v 339 (378)
....+.+|-+.......... ... ....+.+..+|..+ +. ..++.+..||+++++....
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~--~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVS--VGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE--CCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEe--cCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 56789999776543333322 222 12334455567655 44 3467899999999876544
No 69
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=69.11 E-value=51 Score=32.99 Aligned_cols=95 Identities=15% Similarity=0.136 Sum_probs=56.8
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEEEE--C--CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEE
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLGLY--D--NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLW 312 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~--g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~ 312 (378)
.|..+|+.+++...+..-..... ...-+.+ + |.+.+... ....+.||-++...|.....+........-+.+.
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~-~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~s 108 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 108 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSS-CEEEEEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred cEEEEecCCCCCccceeccCCcC-ceEEEEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEEEC
Confidence 67788877655544322111111 1111222 2 66555554 5778999999887777777665443333334455
Q ss_pred EC--CeEEEE-eeCCEEEEEeCCCC
Q 045735 313 KN--GEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 313 ~~--g~ill~-~~~~~~~~yd~~t~ 334 (378)
++ +.+++. ..++.+.+||++++
T Consensus 109 p~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 109 PHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCCCCCEEEEEeCCCcEEEEEeecC
Confidence 55 666555 56788999999887
No 70
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=68.48 E-value=37 Score=28.98 Aligned_cols=108 Identities=7% Similarity=-0.005 Sum_probs=60.8
Q ss_pred Cce-EEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEE
Q 045735 222 NGV-CYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTI 299 (378)
Q Consensus 222 ~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i 299 (378)
+|. +||...... .|..+|..++ ++.+..|... ...+.. -+|+|.+... ....+.+|-.++.........
T Consensus 38 ~g~~l~~~~~~~~---~i~~~~~~~~-~~~~~~~~~~---~~~l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~~ 108 (296)
T 3e5z_A 38 ARSAVIFSDVRQN---RTWAWSDDGQ-LSPEMHPSHH---QNGHCLNKQGHLIACSH--GLRRLERQREPGGEWESIADS 108 (296)
T ss_dssp GGTEEEEEEGGGT---EEEEEETTSC-EEEEESSCSS---EEEEEECTTCCEEEEET--TTTEEEEECSTTCCEEEEECE
T ss_pred CCCEEEEEeCCCC---EEEEEECCCC-eEEEECCCCC---cceeeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEeec
Confidence 565 999887665 8999999988 7666554321 112222 3677755432 345666665544333322111
Q ss_pred cCCCcc--eeceEEEECCeEEEEe------------------eCCEEEEEeCCCCeEEEE
Q 045735 300 GPFIEA--YNPLGLWKNGEIFLES------------------SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 300 ~~~~~~--~~~~~~~~~g~ill~~------------------~~~~~~~yd~~t~~~~~v 339 (378)
...... ..-+.+.++|.+++.. ..+.++.||.+ ++++.+
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 111111 1235566688887752 13479999988 665554
No 71
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=67.68 E-value=60 Score=27.97 Aligned_cols=112 Identities=17% Similarity=0.138 Sum_probs=64.7
Q ss_pred EECceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEE
Q 045735 220 YWNGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFT 298 (378)
Q Consensus 220 ~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~ 298 (378)
+.+|.+|--+...+ +..|..+|+.+++. ..+++|.... .-.+...+++|.+... .... +|+.+-..-..+.+
T Consensus 50 ~~~~~LyestG~~g-~S~v~~vD~~Tgkv~~~~~l~~~~F--geGit~~g~~ly~ltw--~~~~--v~v~D~~t~~~~~t 122 (262)
T 3nol_A 50 YRNGYFYESTGLNG-RSSIRKVDIESGKTLQQIELGKRYF--GEGISDWKDKIVGLTW--KNGL--GFVWNIRNLRQVRS 122 (262)
T ss_dssp EETTEEEEEEEETT-EEEEEEECTTTCCEEEEEECCTTCC--EEEEEEETTEEEEEES--SSSE--EEEEETTTCCEEEE
T ss_pred EECCEEEEECCCCC-CceEEEEECCCCcEEEEEecCCccc--eeEEEEeCCEEEEEEe--eCCE--EEEEECccCcEEEE
Confidence 34777777665432 13799999988765 5667765421 1235556778877543 3443 44445433344455
Q ss_pred EcCCCcceeceEEEECCeE-EEEeeCCEEEEEeCCCCeE-EEEEE
Q 045735 299 IGPFIEAYNPLGLWKNGEI-FLESSDGQLLLYDPNAQEM-RDLGL 341 (378)
Q Consensus 299 i~~~~~~~~~~~~~~~g~i-ll~~~~~~~~~yd~~t~~~-~~v~~ 341 (378)
|.... ...++..+++. ++..+..++..+|++|.+. ..|..
T Consensus 123 i~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 123 FNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 55322 23455555554 4445567899999998654 44443
No 72
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=65.67 E-value=70 Score=28.04 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=39.8
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeC
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDP 331 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~ 331 (378)
+|.+.+... ....+.||-+....|.....+........-+.+.++|..++. ..++.+.+||.
T Consensus 161 ~~~~l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 455544444 567899999887778777666544333334555567776665 45667888875
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=65.58 E-value=67 Score=27.78 Aligned_cols=69 Identities=9% Similarity=0.039 Sum_probs=40.5
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
+|+..++.. ....+.+|-+.. .......+.....-..-+.+.+++..++. ..++.+.+||+++++....
T Consensus 186 ~~~~l~~~~--~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 186 KGKYIIAGH--KDGKISKYDVSN-NYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp GGCEEEEEE--TTSEEEEEETTT-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEc--CCCEEEEEECCC-CcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 455444443 567899998775 12233333332222233445557776665 5578899999999775543
No 74
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=65.34 E-value=60 Score=27.19 Aligned_cols=194 Identities=10% Similarity=0.064 Sum_probs=94.9
Q ss_pred eecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 109 VGPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 109 ~~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
++..+|.|...+. ..+ .++++.+++...+-... .....++.+|+..+. +.... . ..
T Consensus 43 ~d~~~~~ly~~d~~~~~I-~~~~~~g~~~~~~~~~~---------~~~p~~ia~d~~~~~--lyv~d----~------~~ 100 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSI-GRASLHGGEPTTIIRQD---------LGSPEGIALDHLGRT--IFWTD----S------QL 100 (267)
T ss_dssp EETTTTEEEEEETTTTEE-EEEESSSCCCEEEECTT---------CCCEEEEEEETTTTE--EEEEE----T------TT
T ss_pred EecCCCEEEEEECCCCEE-EEEecCCCCcEEEEECC---------CCCccEEEEEecCCe--EEEEE----C------CC
Confidence 3445677776663 355 88888776543321111 123356777775432 22221 1 13
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCccc
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGP 263 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (378)
..+.+++..+..-+.+... . ...+.++.+ +|.+||...... ...|..+++.......+... .. .....
T Consensus 101 ~~I~~~~~~g~~~~~~~~~--~----~~~P~~i~vd~~~g~lyv~~~~~~-~~~I~~~~~dg~~~~~~~~~-~~-~~P~g 171 (267)
T 1npe_A 101 DRIEVAKMDGTQRRVLFDT--G----LVNPRGIVTDPVRGNLYWTDWNRD-NPKIETSHMDGTNRRILAQD-NL-GLPNG 171 (267)
T ss_dssp TEEEEEETTSCSCEEEECS--S----CSSEEEEEEETTTTEEEEEECCSS-SCEEEEEETTSCCCEEEECT-TC-SCEEE
T ss_pred CEEEEEEcCCCCEEEEEEC--C----CCCccEEEEeeCCCEEEEEECCCC-CcEEEEEecCCCCcEEEEEC-CC-CCCcE
Confidence 4567777764432222110 1 112244444 589999875421 02788899876544433211 11 11122
Q ss_pred EEEE--CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEE-CCeEEEEe-eCCEEEEEeCCCCeEE-E
Q 045735 264 LGLY--DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWK-NGEIFLES-SDGQLLLYDPNAQEMR-D 338 (378)
Q Consensus 264 l~~~--~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~g~ill~~-~~~~~~~yd~~t~~~~-~ 338 (378)
+..- ++.|.+... .... |++++-..-.....+. ....|.++.. ++.+++.. ..+.+..+|.++++.. .
T Consensus 172 ia~d~~~~~lyv~d~--~~~~--I~~~~~~g~~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 172 LTFDAFSSQLCWVDA--GTHR--AECLNPAQPGRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp EEEETTTTEEEEEET--TTTE--EEEEETTEEEEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEEEC--CCCE--EEEEecCCCceEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 3322 456766544 3344 4444431111111122 2345555543 55666654 4578999999987654 4
Q ss_pred EE
Q 045735 339 LG 340 (378)
Q Consensus 339 v~ 340 (378)
+.
T Consensus 245 i~ 246 (267)
T 1npe_A 245 FH 246 (267)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 75
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=65.26 E-value=51 Score=28.64 Aligned_cols=115 Identities=14% Similarity=0.151 Sum_probs=62.4
Q ss_pred CceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCC-----------------CCcccEEEE--CCeEEEEE
Q 045735 217 DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPE-----------------LTHGPLGLY--DNSLSLIA 275 (378)
Q Consensus 217 ~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~-----------------~~~~~l~~~--~g~L~~~~ 275 (378)
.++.+ +|.++|...... .|..||..+.++..+..+.... .....+..- +|+|.+..
T Consensus 22 ~~i~~d~~g~~l~v~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDG---RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCEECCTTCSSEEEECTTS---EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCC---eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 44554 578788765543 8999999887777654332210 011233333 57777654
Q ss_pred ecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceec--eEEEE-CCeEEEEee------------------CCEEEEEeCC
Q 045735 276 LDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNP--LGLWK-NGEIFLESS------------------DGQLLLYDPN 332 (378)
Q Consensus 276 ~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~--~~~~~-~g~ill~~~------------------~~~~~~yd~~ 332 (378)
.. .. |++++. ..............+..| +.+.. +|.+++... .+.++.||.+
T Consensus 99 ~~---~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 99 CY---YH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp TT---TE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred CC---CC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 31 22 455543 222221111111112223 55666 788888642 2569999999
Q ss_pred CCeEEEE
Q 045735 333 AQEMRDL 339 (378)
Q Consensus 333 t~~~~~v 339 (378)
+++++.+
T Consensus 174 ~~~~~~~ 180 (322)
T 2fp8_A 174 TKETTLL 180 (322)
T ss_dssp TTEEEEE
T ss_pred CCEEEEe
Confidence 9887654
No 76
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=65.25 E-value=81 Score=28.84 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=64.5
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeee---CC-------CC-CCCCCcccEEE--ECCeEEEEEec-----CCCCEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEI---ES-------PC-TPELTHGPLGL--YDNSLSLIALD-----EIKKCY 283 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i---~~-------P~-~~~~~~~~l~~--~~g~L~~~~~~-----~~~~~~ 283 (378)
+|.++|.+..+ .+..+|+.++.-..+ .+ +. ..... ..+.. -+++|++.... .+...=
T Consensus 237 dG~~~~vs~~g----~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~-q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 237 AGRLVWPTYTG----KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW-QQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTEEEEEBTTS----EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS-SCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred CCcEEEEeCCC----EEEEEECCCCcceeecceeccccccccccccCCCc-ceeeECCCCCeEEEEeccccccccCCCCC
Confidence 78999977754 799999987753322 10 00 00011 11222 24567764321 123467
Q ss_pred EEEEEcCCeeEEEEEEcCCCcceeceEEEECCe-EEEE-e-eCCEEEEEeCCCCeEE
Q 045735 284 QLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGE-IFLE-S-SDGQLLLYDPNAQEMR 337 (378)
Q Consensus 284 ~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~-ill~-~-~~~~~~~yd~~t~~~~ 337 (378)
+||+++-..+..+.+|.... -..-+.+..+++ .++. . .++.+.+||.+|++..
T Consensus 312 ~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 89999986666766665322 112355666775 5554 3 3678999999998754
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=64.67 E-value=68 Score=27.53 Aligned_cols=187 Identities=8% Similarity=0.004 Sum_probs=92.3
Q ss_pred cceEEEEe--CCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEE
Q 045735 113 EGIFCLMN--GNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIA 190 (378)
Q Consensus 113 ~GLll~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 190 (378)
.+.+++.. +..+ .++|+.|++....-..+. ... ++.++|..+ + ++... . ....+.
T Consensus 9 ~~~~~v~~~~~~~v-~~~d~~~~~~~~~~~~~~---------~~~-~~~~s~dg~-~-l~~~~----~------~~~~i~ 65 (331)
T 3u4y_A 9 SNFGIVVEQHLRRI-SFFSTDTLEILNQITLGY---------DFV-DTAITSDCS-N-VVVTS----D------FCQTLV 65 (331)
T ss_dssp CCEEEEEEGGGTEE-EEEETTTCCEEEEEECCC---------CEE-EEEECSSSC-E-EEEEE----S------TTCEEE
T ss_pred CCEEEEEecCCCeE-EEEeCcccceeeeEEccC---------Ccc-eEEEcCCCC-E-EEEEe----C------CCCeEE
Confidence 34444443 2356 999999988754322211 112 667777543 2 22221 1 133678
Q ss_pred EEEcCCCCc-c-cccCCCCCCCccccCCCceEE--Cce-EEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccE
Q 045735 191 VYNLSTDSW-R-GFRGFKLGRDYVCGRIDSTYW--NGV-CYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPL 264 (378)
Q Consensus 191 vyss~~~~W-~-~~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l 264 (378)
+|+..++.- . ..... .-+. .++.+ +|. +| .....+....|..+|+.+.+.. .++..... ..+
T Consensus 66 ~~d~~~~~~~~~~~~~~--~~~~-----~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~----~~~ 133 (331)
T 3u4y_A 66 QIETQLEPPKVVAIQEG--QSSM-----ADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDA----VGI 133 (331)
T ss_dssp EEECSSSSCEEEEEEEC--SSCC-----CCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTE----EEE
T ss_pred EEECCCCceeEEecccC--CCCc-----cceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCc----cce
Confidence 888877653 1 11110 0010 11222 454 44 3332211127999999876653 33332211 122
Q ss_pred E-EECCe-EEEEEecCCCCEEEEEEEcC-Cee-EE-EEEEcCCCcceeceEEEECCe-EEEEe-eCCEEEEEeCCCCeE
Q 045735 265 G-LYDNS-LSLIALDEIKKCYQLWVLKE-RCW-IK-QFTIGPFIEAYNPLGLWKNGE-IFLES-SDGQLLLYDPNAQEM 336 (378)
Q Consensus 265 ~-~~~g~-L~~~~~~~~~~~~~IW~L~~-~~W-~~-~~~i~~~~~~~~~~~~~~~g~-ill~~-~~~~~~~yd~~t~~~ 336 (378)
. .-+|+ |.+... .....+.+|.++. +.- .. ...+.. .....-+.+.++|+ +++.. .++.+..||+++++.
T Consensus 134 ~~spdg~~l~~~~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 134 AISPNGNGLILIDR-SSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EECTTSSCEEEEEE-TTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EECCCCCEEEEEec-CCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 2 23565 444433 2334499999986 221 11 122221 11223345566787 44443 467899999998774
No 78
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=64.43 E-value=65 Score=27.25 Aligned_cols=30 Identities=17% Similarity=0.408 Sum_probs=22.4
Q ss_pred eee-cccceEEEEeCCceEEEEeccccceecC
Q 045735 108 FVG-PYEGIFCLMNGNKYISLWNLATQELRRL 138 (378)
Q Consensus 108 ~~~-s~~GLll~~~~~~~~~V~NP~T~~~~~L 138 (378)
+++ |.+|+|-...+..+ .|||+.|++...+
T Consensus 30 ~l~WS~~~~lAvg~D~tV-~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 30 LVDWSSGNVLAVALDNSV-YLWSASSGDILQL 60 (318)
T ss_dssp CEEECTTSEEEEEETTEE-EEEETTTCCEEEE
T ss_pred EEEECCCCEEEEEeCCEE-EEEECCCCCEEEE
Confidence 444 67787776666677 9999999987653
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=63.88 E-value=78 Score=28.00 Aligned_cols=185 Identities=7% Similarity=-0.035 Sum_probs=88.6
Q ss_pred cccceEEEEeCC-ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeE
Q 045735 111 PYEGIFCLMNGN-KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHI 189 (378)
Q Consensus 111 s~~GLll~~~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 189 (378)
+.+|.++....+ .+ .+++..+++....-... ......+.+.|... + +... .. .-.+
T Consensus 215 ~~~~~~~~~~~~g~i-~~~d~~~~~~~~~~~~~---------~~~i~~~~~~~~~~-~--l~~~---~~-------d~~i 271 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAI-FVYQITEKTPTGKLIGH---------HGPISVLEFNDTNK-L--LLSA---SD-------DGTL 271 (425)
T ss_dssp EETTEEEEECGGGCE-EEEETTCSSCSEEECCC---------SSCEEEEEEETTTT-E--EEEE---ET-------TSCE
T ss_pred cCCCEEEEEcCCCeE-EEEEcCCCceeeeeccC---------CCceEEEEECCCCC-E--EEEE---cC-------CCEE
Confidence 445666655544 55 99999887543211111 12234556666433 2 2221 11 3457
Q ss_pred EEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeee-eCCCCCCCCCcccEE-
Q 045735 190 AVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQE-IESPCTPELTHGPLG- 265 (378)
Q Consensus 190 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~- 265 (378)
.+|+..++.-...-... .-+. .++.+ +| +.+....+. .|..+|+.+.+... +..... .. ..+.
T Consensus 272 ~i~d~~~~~~~~~~~~~-~~~i-----~~~~~~~~~--~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~--~i-~~~~~ 338 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGH-SQSI-----VSASWVGDD--KVISCSMDG--SVRLWSLKQNTLLALSIVDGV--PI-FAGRI 338 (425)
T ss_dssp EEECSSSBSCSEEECCC-SSCE-----EEEEEETTT--EEEEEETTS--EEEEEETTTTEEEEEEECTTC--CE-EEEEE
T ss_pred EEEECCCCccceEecCC-CccE-----EEEEECCCC--EEEEEeCCC--cEEEEECCCCcEeEecccCCc--cE-EEEEE
Confidence 77877664322111000 0000 12222 55 333333222 89999998765433 222111 00 1111
Q ss_pred EECCeEEEEEecCCCCEEEEEEEcC-C----e-------------eEEEEEEcCCCc--ceeceEEEECCeEEEE-eeCC
Q 045735 266 LYDNSLSLIALDEIKKCYQLWVLKE-R----C-------------WIKQFTIGPFIE--AYNPLGLWKNGEIFLE-SSDG 324 (378)
Q Consensus 266 ~~~g~L~~~~~~~~~~~~~IW~L~~-~----~-------------W~~~~~i~~~~~--~~~~~~~~~~g~ill~-~~~~ 324 (378)
.-+|++.+... ....+.||-+.. . . ...+..+..... ...-+.+.+++..++. ..++
T Consensus 339 s~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 339 SQDGQKYAVAF--MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp CTTSSEEEEEE--TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred cCCCCEEEEEE--CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 12466555444 467899998876 1 0 113333433221 2233445557776554 5677
Q ss_pred EEEEEeCCC
Q 045735 325 QLLLYDPNA 333 (378)
Q Consensus 325 ~~~~yd~~t 333 (378)
.+.+||++.
T Consensus 417 ~i~iw~~~g 425 (425)
T 1r5m_A 417 EGSVVAIPG 425 (425)
T ss_dssp CCEEEECCC
T ss_pred eEEEEeecC
Confidence 899999863
No 80
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=63.40 E-value=30 Score=28.89 Aligned_cols=111 Identities=7% Similarity=0.097 Sum_probs=59.4
Q ss_pred CceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECCeEEEEEecCCCCEEEEEEEcCCee
Q 045735 217 DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDNSLSLIALDEIKKCYQLWVLKERCW 293 (378)
Q Consensus 217 ~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~L~~~~W 293 (378)
.++.+ +|.+|+... .. .|..||..+.....+..+.. .....+.. -+|+|.+... ....+.+| +....
T Consensus 70 ~~i~~~~~g~l~v~~~-~~---~i~~~d~~~~~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~--~~~~i~~~--~~~~~ 139 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-NN---RVVTLAAGSNNQTVLPFDGL--NYPEGLAVDTQGAVYVADR--GNNRVVKL--AAGSK 139 (270)
T ss_dssp CCEEECTTCCEEEEET-TT---EEEEECTTCSCCEECCCCSC--SSEEEEEECTTCCEEEEEG--GGTEEEEE--CTTCC
T ss_pred ceeEECCCCCEEEEcC-CC---EEEEEeCCCceEeeeecCCc--CCCcceEECCCCCEEEEEC--CCCEEEEE--ECCCc
Confidence 44444 578777655 32 89999998876655543221 11122332 2677666443 34455555 43211
Q ss_pred EEEEEEcCCCcceec--eEEEECCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 294 IKQFTIGPFIEAYNP--LGLWKNGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 294 ~~~~~i~~~~~~~~~--~~~~~~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
..... .......| +.+..+|.+++.. ..+.+..||.+++.....
T Consensus 140 ~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 140 TQTVL--PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp SCEEC--CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred eeEee--ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEee
Confidence 11111 11112233 4455578877764 356899999998775543
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=61.86 E-value=7 Score=34.93 Aligned_cols=97 Identities=5% Similarity=-0.008 Sum_probs=46.8
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEEC
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
.|..+|+.+..+..+..-......-..+. .-+|++.+... ....+.||-++. ..|.....+.....-..-+.+.++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS--QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE--TTSSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 67788887776554432111111101121 12455554444 567899999987 436655554433322223344446
Q ss_pred CeEEEE-eeCCEEEEEeCCCCe
Q 045735 315 GEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 315 g~ill~-~~~~~~~~yd~~t~~ 335 (378)
+..++. ..++.+.+||+++++
T Consensus 112 ~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 112 EDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp SSCCEEEESSSCEEECCC----
T ss_pred CCEEEEEecCCeEEEEEECCcc
Confidence 665554 557789999998876
No 82
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=61.29 E-value=90 Score=30.78 Aligned_cols=110 Identities=16% Similarity=0.246 Sum_probs=60.5
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCc--eeeeeCCCCCCC--------CCcccEEEECCeEEEEEecCCCCEEEEE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDE--VIQEIESPCTPE--------LTHGPLGLYDNSLSLIALDEIKKCYQLW 286 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~i~~P~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~~~IW 286 (378)
.++..+|.+|...... .|.++|..++ .|+. ..+.... .....+...+|++.+... ... |.
T Consensus 61 ~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~--l~ 130 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSWS----RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGR--LI 130 (668)
T ss_dssp CCEEETTEEEEEEGGG----EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSE--EE
T ss_pred CCEEECCEEEEECCCC----eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcC---CCE--EE
Confidence 6688899999887654 8999998664 4553 2221110 001123345676655322 223 44
Q ss_pred EEcC----CeeEEEEEEcCCC--cc-eeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEE
Q 045735 287 VLKE----RCWIKQFTIGPFI--EA-YNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 287 ~L~~----~~W~~~~~i~~~~--~~-~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v 339 (378)
.|+- ..|..... ++.. .. ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 131 alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTT-DPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEETTTCCEEEEEECS-CTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEECCCCCEeeeeccC-CCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4442 45765431 1111 11 23332 2667666533 36899999999986653
No 83
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=61.23 E-value=62 Score=27.87 Aligned_cols=108 Identities=7% Similarity=-0.025 Sum_probs=56.2
Q ss_pred CceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTI 299 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i 299 (378)
+|.+|.....+. .|..+|+.+.+. ..++++..... ..+. .-+|+..++.. .....+.+|-++..+-.....+
T Consensus 10 ~~~~~v~~~~~~---~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~~~v~~-~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 10 GHEYMIVTNYPN---NLHVVDVASDTVYKSCVMPDKFGP--GTAMMAPDNRTAYVLN-NHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp TCEEEEEEETTT---EEEEEETTTTEEEEEEECSSCCSS--CEEEECTTSSEEEEEE-TTTTEEEEEETTTTEEEEEEES
T ss_pred CCEEEEEeCCCC---eEEEEECCCCcEEEEEecCCCCCC--ceeEECCCCCEEEEEe-CCCCcEEEEeCCCCcEEEEEEc
Confidence 455555444443 899999988765 35566541111 1222 23565443333 2456777776655332222222
Q ss_pred cCCC----cceeceEEEECCeEEEE-ee------------CCEEEEEeCCCCe
Q 045735 300 GPFI----EAYNPLGLWKNGEIFLE-SS------------DGQLLLYDPNAQE 335 (378)
Q Consensus 300 ~~~~----~~~~~~~~~~~g~ill~-~~------------~~~~~~yd~~t~~ 335 (378)
...+ ....-+.+.++|+.++. .. .+.+..||+++++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 1110 00123455567765554 32 3789999998843
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=60.87 E-value=60 Score=27.72 Aligned_cols=64 Identities=14% Similarity=0.208 Sum_probs=39.1
Q ss_pred CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC--CeEEEE-eeCCEEEEEeCCCC
Q 045735 269 NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN--GEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~--g~ill~-~~~~~~~~yd~~t~ 334 (378)
|.+.+... .+..+.||-++...|.....+........-+.+.++ |.+++. ..++.+.+||++++
T Consensus 67 g~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCS--YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEE--TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEc--CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 56555444 578999999887666655554422222233444443 555554 56778899998765
No 85
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=60.19 E-value=97 Score=27.86 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=37.6
Q ss_pred EEEEEEcCCeeEEEEEEcCCCcceeceEEEECCe-EEEE-e-eCCEEEEEeCCCCeEEEE
Q 045735 283 YQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGE-IFLE-S-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 283 ~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~-ill~-~-~~~~~~~yd~~t~~~~~v 339 (378)
=+||+++-.....+.+|.... ...-+.+..+|+ .++. . .++.+.+||.+|++....
T Consensus 298 ~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 468888876677777774322 223355667887 5555 3 367899999999876543
No 86
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=59.80 E-value=1.5e+02 Score=29.96 Aligned_cols=155 Identities=10% Similarity=0.032 Sum_probs=80.0
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHG 262 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 262 (378)
...++++++.+..-+.+... . ...+.++.+ +|.|||....... .|..+++....-..+-. ... ....
T Consensus 492 ~~~I~v~~ldG~~~~~l~~~--~----l~~P~gIaVDp~~g~LYwtD~g~~~--~I~~~~~dG~~~~~lv~-~~l-~~P~ 561 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFRE--N----GSKPRAIVVDPVHGFMYWTDWGTPA--KIKKGGLNGVDIYSLVT-ENI-QWPN 561 (791)
T ss_dssp TTEEEEEETTSSSEEEEEEC--T----TCCEEEEEEETTTTEEEEEECSSSC--EEEEEETTSCCEEEEEC-SSC-SCEE
T ss_pred CCeEEEEeCCCCeEEEEEeC--C----CCCcceEEEecCCCCEEEecCCCCC--eEEEEecCCCceEEEEe-CCC-CCce
Confidence 44678888776544333210 1 112255666 5899998865422 79999997654443321 111 1112
Q ss_pred cEEE--ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEE-CCeEEEEe-eCCEEEEEeCCCCeEE
Q 045735 263 PLGL--YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWK-NGEIFLES-SDGQLLLYDPNAQEMR 337 (378)
Q Consensus 263 ~l~~--~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~-~g~ill~~-~~~~~~~yd~~t~~~~ 337 (378)
.|+. .+|+|++... ... .||+.+- +.-.++. +.....+..|+++.- ++.||+.. ..+.|..+|..+++-.
T Consensus 562 GLavD~~~~~LYwaD~--~~~--~I~~~d~dG~~~~~v-~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDS--KLH--SISSIDVNGGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEETTTTEEEEEET--TTT--EEEEEETTSCSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCC
T ss_pred EEEEecCCCeEEEEeC--CCC--cEEEEecCCCceEEE-ecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcce
Confidence 3333 3678887654 333 4555544 2211111 121123456777654 45565553 4567999998776533
Q ss_pred EEEEecee--EEEEEeeecc
Q 045735 338 DLGLRGLW--FYVHCFRESL 355 (378)
Q Consensus 338 ~v~~~~~~--~~~~~y~~sl 355 (378)
.+-..+.. +.+..|-+..
T Consensus 637 ~~l~~~l~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 637 NLLAENLLSPEDMVLFHNLT 656 (791)
T ss_dssp EEEECSCSCCCCEEEESGGG
T ss_pred EEeecCCCCceeEeeecccc
Confidence 33232222 4555665544
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=59.40 E-value=86 Score=26.97 Aligned_cols=106 Identities=9% Similarity=0.095 Sum_probs=53.6
Q ss_pred CceEEEEeeecCCccEEEEEECCCce--eeeeCCCCCCCCCc-ccEE-----EECCeEEEEEecCCCCEEEEEEEcCCee
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEV--IQEIESPCTPELTH-GPLG-----LYDNSLSLIALDEIKKCYQLWVLKERCW 293 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~-~~l~-----~~~g~L~~~~~~~~~~~~~IW~L~~~~W 293 (378)
+|........++ .|..+|+.+.+ ...+.......... ..+. ..+|++.+... ....+.+|-++...
T Consensus 128 ~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~- 201 (357)
T 3i2n_A 128 GAPEIVTGSRDG---TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMA- 201 (357)
T ss_dssp CCCEEEEEETTS---CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTE-
T ss_pred CccEEEEEeCCC---eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc--cCCeEEEEECccCc-
Confidence 444433333333 78999998764 34444333221111 1111 13666665554 56789999887622
Q ss_pred EEEEEEcCCCcceeceEEEE---CCeEEEE-eeCCEEEEEeCCCCe
Q 045735 294 IKQFTIGPFIEAYNPLGLWK---NGEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 294 ~~~~~i~~~~~~~~~~~~~~---~g~ill~-~~~~~~~~yd~~t~~ 335 (378)
......... -..-+.+.+ ++..++. ..++.+.+||+++++
T Consensus 202 -~~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 202 -LRWETNIKN-GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp -EEEEEECSS-CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred -eeeecCCCC-ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 111111111 122334444 4555444 557788888877643
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=59.31 E-value=84 Score=26.83 Aligned_cols=115 Identities=10% Similarity=0.082 Sum_probs=63.4
Q ss_pred Cce-EEEEeeecCCccEEEEEECC--Cceee---ee-CCCCCCCCC-cc-cEE-EECCeEEEEEecCCCCEEEEEEEcC-
Q 045735 222 NGV-CYWLAREEGENHVIISFDLS--DEVIQ---EI-ESPCTPELT-HG-PLG-LYDNSLSLIALDEIKKCYQLWVLKE- 290 (378)
Q Consensus 222 ~G~-lywl~~~~~~~~~il~fD~~--~e~~~---~i-~~P~~~~~~-~~-~l~-~~~g~L~~~~~~~~~~~~~IW~L~~- 290 (378)
+|. +|....... .|..+|+. +.++. .+ .+|...... .. .+. .-+|+..++.. .....+.+|-++.
T Consensus 188 dg~~l~~~~~~~~---~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~-~~~~~i~v~d~~~~ 263 (343)
T 1ri6_A 188 NEQYAYCVNELNS---SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD-RTASLITVFSVSED 263 (343)
T ss_dssp TSSEEEEEETTTT---EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTT
T ss_pred CCCEEEEEeCCCC---EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe-cCCCEEEEEEEcCC
Confidence 565 444432332 78888884 34432 22 234332111 11 122 22465433333 3577999999985
Q ss_pred -CeeEEEEEEcCCCcceeceEEEECCeEEEE-e-eCCEEEEE--eCCCCeEEEEEE
Q 045735 291 -RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-S-SDGQLLLY--DPNAQEMRDLGL 341 (378)
Q Consensus 291 -~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~-~~~~~~~y--d~~t~~~~~v~~ 341 (378)
..+.....+..... ..-+.+.++|..++. . .++.+.+| |.++++++.+..
T Consensus 264 ~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 264 GSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp SCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred CCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 55666666654332 334566667775554 3 35677777 777888887754
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=59.20 E-value=75 Score=26.25 Aligned_cols=187 Identities=8% Similarity=0.095 Sum_probs=94.2
Q ss_pred eeecccceEEEEe-CCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 108 FVGPYEGIFCLMN-GNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 108 ~~~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
+.-..+|-+.+.. ...+ .++||.++....++.... ....++.+|+... +... . . ..
T Consensus 72 i~~~~~g~l~v~~~~~~i-~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g~---l~v~-~---~------~~ 128 (270)
T 1rwi_B 72 LAVDGAGTVYVTDFNNRV-VTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQGA---VYVA-D---R------GN 128 (270)
T ss_dssp EEECTTCCEEEEETTTEE-EEECTTCSCCEECCCCSC---------SSEEEEEECTTCC---EEEE-E---G------GG
T ss_pred eEECCCCCEEEEcCCCEE-EEEeCCCceEeeeecCCc---------CCCcceEECCCCC---EEEE-E---C------CC
Confidence 4334466666665 3466 999998877665543221 2235677777432 2222 1 1 13
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccE
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPL 264 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l 264 (378)
..+.+|+.++......... . .....++.+ +|.+|+...... .|..||..+........... .....+
T Consensus 129 ~~i~~~~~~~~~~~~~~~~--~----~~~p~~i~~~~~g~l~v~~~~~~---~i~~~~~~~~~~~~~~~~~~--~~p~~i 197 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLPFT--G----LNDPDGVAVDNSGNVYVTDTDNN---RVVKLEAESNNQVVLPFTDI--TAPWGI 197 (270)
T ss_dssp TEEEEECTTCCSCEECCCC--S----CCSCCCEEECTTCCEEEEEGGGT---EEEEECTTTCCEEECCCSSC--CSEEEE
T ss_pred CEEEEEECCCceeEeeccc--c----CCCceeEEEeCCCCEEEEECCCC---EEEEEecCCCceEeecccCC--CCceEE
Confidence 3456665544433221110 1 111244444 588777665443 89999998766544322111 111223
Q ss_pred EE-ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceE--EEECCeEEEEe-eCCEEEEEeCCCCe
Q 045735 265 GL-YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLG--LWKNGEIFLES-SDGQLLLYDPNAQE 335 (378)
Q Consensus 265 ~~-~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~--~~~~g~ill~~-~~~~~~~yd~~t~~ 335 (378)
.. -+|.|.+... ....+.+|-.+. .... + +...+..|.+ +.++|.+++.. .++.+..|++..++
T Consensus 198 ~~d~~g~l~v~~~--~~~~v~~~~~~~~~~~~----~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 198 AVDEAGTVYVTEH--NTNQVVKLLAGSTTSTV----L-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCCEEEEET--TTSCEEEECTTCSCCEE----C-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EECCCCCEEEEEC--CCCcEEEEcCCCCccee----e-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 32 2566665443 344555554333 1111 1 1122234444 44567877764 46789999987665
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=58.78 E-value=26 Score=30.53 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=54.6
Q ss_pred ceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccEEEE---CCeEEEEEecCCCCEEEEEEEcCCeeEEEEE
Q 045735 223 GVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPLGLY---DNSLSLIALDEIKKCYQLWVLKERCWIKQFT 298 (378)
Q Consensus 223 G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~---~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~ 298 (378)
|.+......++ .|..+|+.+.+.. .+.. .. ....-+.+ ++.+.+... ....+.||-+.... ....
T Consensus 85 ~~~l~~~~~dg---~i~v~d~~~~~~~~~~~~--~~--~~i~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~--~~~~ 153 (366)
T 3k26_A 85 HPLLAVAGSRG---IIRIINPITMQCIKHYVG--HG--NAINELKFHPRDPNLLLSVS--KDHALRLWNIQTDT--LVAI 153 (366)
T ss_dssp CEEEEEEETTC---EEEEECTTTCCEEEEEES--CC--SCEEEEEECSSCTTEEEEEE--TTSCEEEEETTTTE--EEEE
T ss_pred CCEEEEecCCC---EEEEEEchhceEeeeecC--CC--CcEEEEEECCCCCCEEEEEe--CCCeEEEEEeecCe--EEEE
Confidence 34444443333 7888898765442 2221 11 11111122 566655554 57789999887632 2233
Q ss_pred E---cCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCe
Q 045735 299 I---GPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 299 i---~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~ 335 (378)
+ ........-+.+.+++..++. ..++.+.+||+++++
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred ecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 3 122222233444456776665 457789999999764
No 91
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=58.63 E-value=88 Score=26.88 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=63.1
Q ss_pred ceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC
Q 045735 223 GVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP 301 (378)
Q Consensus 223 G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~ 301 (378)
|.+|-.+...+ ...|..+|+.+.+. ..+++|..... ..+...+++|.+... .... +++.+-..-..+.+|+.
T Consensus 32 g~Lyvstg~~~-~s~v~~iD~~tg~v~~~i~l~~~~fg--eGi~~~g~~lyv~t~--~~~~--v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 32 DTLFESTGLYG-RSSVRQVALQTGKVENIHKMDDSYFG--EGLTLLNEKLYQVVW--LKNI--GFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp TEEEEEECSTT-TCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEET--TCSE--EEEEETTTTEEEEEEEC
T ss_pred CeEEEECCCCC-CCEEEEEECCCCCEEEEEecCCCcce--EEEEEeCCEEEEEEe--cCCE--EEEEECCCCcEEEEEEC
Confidence 67776654211 13899999987654 55676654221 234444667766543 3444 45555434455556653
Q ss_pred CCcceeceEEEECCe-EEEEeeCCEEEEEeCCCCeE-EEEE
Q 045735 302 FIEAYNPLGLWKNGE-IFLESSDGQLLLYDPNAQEM-RDLG 340 (378)
Q Consensus 302 ~~~~~~~~~~~~~g~-ill~~~~~~~~~yd~~t~~~-~~v~ 340 (378)
. .....++..+|+ +++...++.+..+|++|.+. +.|.
T Consensus 105 g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 105 Q--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp C--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred C--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 2 112355665554 66666677899999999664 4444
No 92
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=58.26 E-value=1e+02 Score=29.66 Aligned_cols=111 Identities=12% Similarity=0.124 Sum_probs=61.5
Q ss_pred CceEECceEEEEee-ecCCccEEEEEEC-CCc--eeeeeCCCCCCC--------CCcccEEEECCeEEEEEecCCCCEEE
Q 045735 217 DSTYWNGVCYWLAR-EEGENHVIISFDL-SDE--VIQEIESPCTPE--------LTHGPLGLYDNSLSLIALDEIKKCYQ 284 (378)
Q Consensus 217 ~~v~~~G~lywl~~-~~~~~~~il~fD~-~~e--~~~~i~~P~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~~~ 284 (378)
.++..+|.+|.... .. .|.++|. .++ .|+. .++.... .....+...+|++.+... .. .
T Consensus 57 ~P~v~~g~vyv~~~~~~----~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg--~ 126 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFPN----NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NG--H 126 (571)
T ss_dssp CCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TS--E
T ss_pred ccEEECCEEEEEeCCCC----EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CC--E
Confidence 66888999998876 33 6999998 654 4543 3322110 011223445777665322 22 3
Q ss_pred EEEEcC----CeeEEEEEEcCC-Ccc-eeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEE
Q 045735 285 LWVLKE----RCWIKQFTIGPF-IEA-YNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 285 IW~L~~----~~W~~~~~i~~~-~~~-~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v 339 (378)
|..|+- ..|.....-... ..+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 444543 457653210000 012 23433 2677776644 57899999999886653
No 93
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=57.91 E-value=76 Score=26.94 Aligned_cols=65 Identities=11% Similarity=0.119 Sum_probs=41.3
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEE--CCeEEEE-eeCCEEEEEeCCCC
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWK--NGEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~--~g~ill~-~~~~~~~~yd~~t~ 334 (378)
+|++.+... ....+.||-++. ..+.....+........-+.+.. ++.+++. ..++.+.+||++++
T Consensus 22 ~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEee--CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 555544444 577999999986 56666666554332233344444 4666665 55778999999885
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=57.73 E-value=99 Score=27.15 Aligned_cols=107 Identities=7% Similarity=0.016 Sum_probs=54.5
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCC--Cc--ccEEEE-CCeEEEEEecCCCCEEEEEEEcCCeeEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPEL--TH--GPLGLY-DNSLSLIALDEIKKCYQLWVLKERCWIKQ 296 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~--~~--~~l~~~-~g~L~~~~~~~~~~~~~IW~L~~~~W~~~ 296 (378)
+|........++ .|..+|+.+.+............ .. ...... .+.+.+.. ....+.||-+... ..+
T Consensus 256 ~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~v~d~~~~--~~~ 327 (408)
T 4a11_B 256 DGLHLLTVGTDN---RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP---YGSTIAVYTVYSG--EQI 327 (408)
T ss_dssp TSSEEEEEETTS---CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE---ETTEEEEEETTTC--CEE
T ss_pred CCCEEEEecCCC---eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe---cCCEEEEEECcCC--cce
Confidence 454444443333 78999998765433221111100 11 111111 23333333 3568889977652 233
Q ss_pred EEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeE
Q 045735 297 FTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEM 336 (378)
Q Consensus 297 ~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~ 336 (378)
..+........-+.+.+++.+++. ..++.+.+||+++.+.
T Consensus 328 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 444433323334566667777665 4578899999998764
No 95
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=57.71 E-value=87 Score=26.52 Aligned_cols=191 Identities=10% Similarity=0.081 Sum_probs=91.2
Q ss_pred CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCccc
Q 045735 122 NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRG 201 (378)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 201 (378)
..+ .++||.+++...+..+... + ......++.+|+..+. +.... . ...+.+|+.. +..+.
T Consensus 46 ~~i-~~~d~~~g~~~~~~~~~~~---~--~~~~~~~i~~~~~~g~--l~v~~----~-------~~~l~~~d~~-g~~~~ 105 (314)
T 1pjx_A 46 GEI-LRIDLKTGKKTVICKPEVN---G--YGGIPAGCQCDRDANQ--LFVAD----M-------RLGLLVVQTD-GTFEE 105 (314)
T ss_dssp CEE-EEECTTTCCEEEEECCEET---T--EECCEEEEEECSSSSE--EEEEE----T-------TTEEEEEETT-SCEEE
T ss_pred CEE-EEEeCCCCcEEEEEecccC---C--CCCCCceEEEecCCCc--EEEEE----C-------CCCEEEEeCC-CCEEE
Confidence 466 9999999887655321100 0 1123456677765222 22221 1 1256778777 55443
Q ss_pred c-cCCCCCCCccccCCCceEE--CceEEEEeeecC------------CccEEEEEECCCceeeeeCCCCCCCCCcccEE-
Q 045735 202 F-RGFKLGRDYVCGRIDSTYW--NGVCYWLAREEG------------ENHVIISFDLSDEVIQEIESPCTPELTHGPLG- 265 (378)
Q Consensus 202 ~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~------------~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~- 265 (378)
. .......+. .....+.+ +|.+|....... ....|..+|.. +++..+.-.. . ....+.
T Consensus 106 ~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~-~~~~i~~ 179 (314)
T 1pjx_A 106 IAKKDSEGRRM--QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF--Q-FPNGIAV 179 (314)
T ss_dssp CCSBCTTSCBC--BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE--S-SEEEEEE
T ss_pred EEeccCCCccc--cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC--C-CcceEEE
Confidence 3 211101111 11134444 687776554320 00278999987 5554331100 0 001222
Q ss_pred E----ECCe-EEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCC-cc-eec--eEEEECCeEEEEe-eCCEEEEEeCCCC
Q 045735 266 L----YDNS-LSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFI-EA-YNP--LGLWKNGEIFLES-SDGQLLLYDPNAQ 334 (378)
Q Consensus 266 ~----~~g~-L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~-~~-~~~--~~~~~~g~ill~~-~~~~~~~yd~~t~ 334 (378)
. -+|+ |.+... ....+.+|-++. ........+.... .. ..| +.+.++|.+++.. .++.+..||++++
T Consensus 180 ~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred ecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 2 2453 443332 456777777653 4333322221111 11 233 4445578888774 4678999999955
Q ss_pred e-EEEEE
Q 045735 335 E-MRDLG 340 (378)
Q Consensus 335 ~-~~~v~ 340 (378)
+ .+.+.
T Consensus 258 ~~~~~~~ 264 (314)
T 1pjx_A 258 QPKMRIR 264 (314)
T ss_dssp SCSEEEE
T ss_pred cEeEEEe
Confidence 4 34443
No 96
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=57.57 E-value=92 Score=26.77 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=56.7
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE-ECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL-YDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFT 298 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~ 298 (378)
+|.+||...... .|..||..++.-..+..+.. ...+.. -+|+|.+.... .....|+.++. .+......
T Consensus 42 ~g~lyv~d~~~~---~I~~~d~~g~~~~~~~~~~~----p~gia~~~dG~l~vad~~--~~~~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 42 DGTIFVTNHEVG---EIVSITPDGNQQIHATVEGK----VSGLAFTSNGDLVATGWN--ADSIPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp TSCEEEEETTTT---EEEEECTTCCEEEEEECSSE----EEEEEECTTSCEEEEEEC--TTSCEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEeCCCC---eEEEECCCCceEEEEeCCCC----ceeEEEcCCCcEEEEecc--CCcceEEEEcCCCCeEEEEEe
Confidence 789999875543 89999998765444454421 122322 36787665432 22345666643 44444433
Q ss_pred EcCCCcceeceEEEECCeEEEEe-eCCEEEEEeCCCCe
Q 045735 299 IGPFIEAYNPLGLWKNGEIFLES-SDGQLLLYDPNAQE 335 (378)
Q Consensus 299 i~~~~~~~~~~~~~~~g~ill~~-~~~~~~~yd~~t~~ 335 (378)
+.... ...-...+.++.+++.. ..+.++.+|..+++
T Consensus 113 ~~~~~-~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 113 LPDAI-FLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp CTTCS-CEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCcc-ccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 32111 11112234455566554 36789999988753
No 97
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=57.41 E-value=34 Score=29.59 Aligned_cols=109 Identities=6% Similarity=-0.021 Sum_probs=57.3
Q ss_pred Cce-EEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEE
Q 045735 222 NGV-CYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTI 299 (378)
Q Consensus 222 ~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i 299 (378)
+|. +||...... .|..+|.. ++.+.+..|... ...+. .-+|+|.+... ....+.+|-.+ .+.......
T Consensus 55 ~g~~l~~~d~~~~---~i~~~~~~-g~~~~~~~~~~~---~~gl~~d~dG~l~v~~~--~~~~v~~~~~~-g~~~~~~~~ 124 (305)
T 3dr2_A 55 AQRTLVWSDLVGR---RVLGWRED-GTVDVLLDATAF---TNGNAVDAQQRLVHCEH--GRRAITRSDAD-GQAHLLVGR 124 (305)
T ss_dssp GGTEEEEEETTTT---EEEEEETT-SCEEEEEESCSC---EEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECE
T ss_pred CCCEEEEEECCCC---EEEEEeCC-CCEEEEeCCCCc---cceeeECCCCCEEEEEC--CCCEEEEECCC-CCEEEEEec
Confidence 454 899876654 79999984 445555433321 11122 23677665432 33455544332 333222111
Q ss_pred cCCCcc--eeceEEEECCeEEEEe------------------eCCEEEEEeCCCCeEEEEE
Q 045735 300 GPFIEA--YNPLGLWKNGEIFLES------------------SDGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 300 ~~~~~~--~~~~~~~~~g~ill~~------------------~~~~~~~yd~~t~~~~~v~ 340 (378)
...... ..-+.+.++|.+++.. ....++.||+++++++.+.
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 111111 1225566688888841 1257999999888877653
No 98
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=57.24 E-value=1.1e+02 Score=27.44 Aligned_cols=141 Identities=11% Similarity=0.002 Sum_probs=70.4
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCC-CceEE--CceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcc
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHG 262 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~ 262 (378)
..+.+|+..++.-....... .+.. .... .++.+ +|.++.....+. .|..+|+.+.+.. .+..... ...
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~~s~~~d~---~v~~~d~~~~~~~~~~~~~~~---~~~ 215 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPE-KYKK-KLGFVETISIPEHNELWVSQMQAN---AVHVFDLKTLAYKATVDLTGK---WSK 215 (433)
T ss_dssp SSEEEEETTTCCEEEECCCH-HHHT-TCCEEEEEEEGGGTEEEEEEGGGT---EEEEEETTTCCEEEEEECSSS---SEE
T ss_pred CeEEEEECCCCeEeeecCcc-cccc-cCCceeEEEEcCCCEEEEEECCCC---EEEEEECCCceEEEEEcCCCC---Cee
Confidence 35788888877644321100 0000 0001 23344 677666555443 8999999875543 3331111 111
Q ss_pred cEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-e--------eCCEEEEEeCC
Q 045735 263 PLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-S--------SDGQLLLYDPN 332 (378)
Q Consensus 263 ~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~--------~~~~~~~yd~~ 332 (378)
.+. .-+|+..++.. .....+.+|-++.... +..+.... -..-+.+.++|..++. . .++.+..||++
T Consensus 216 ~~~~~~~~~~l~~~~-~~~~~i~~~d~~~~~~--~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 216 ILLYDPIRDLVYCSN-WISEDISVIDRKTKLE--IRKTDKIG-LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp EEEEETTTTEEEEEE-TTTTEEEEEETTTTEE--EEECCCCS-EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred EEEEcCCCCEEEEEe-cCCCcEEEEECCCCcE--EEEecCCC-CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 222 22455443333 2466888887765332 22222211 1222334456655544 3 25689999999
Q ss_pred CCeEEEE
Q 045735 333 AQEMRDL 339 (378)
Q Consensus 333 t~~~~~v 339 (378)
+++....
T Consensus 292 ~~~~~~~ 298 (433)
T 3bws_A 292 KEKLIDT 298 (433)
T ss_dssp TTEEEEE
T ss_pred CCcEEee
Confidence 9876544
No 99
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=57.22 E-value=91 Score=26.59 Aligned_cols=111 Identities=8% Similarity=0.040 Sum_probs=59.1
Q ss_pred Cce-EEEEeeecCCccEEEEEECC--Cceeeee-CCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcC-CeeEE
Q 045735 222 NGV-CYWLAREEGENHVIISFDLS--DEVIQEI-ESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKE-RCWIK 295 (378)
Q Consensus 222 ~G~-lywl~~~~~~~~~il~fD~~--~e~~~~i-~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~ 295 (378)
+|. +|....... .|..||+. ++++..+ .++..... ..+. .-+|+..++.. .....+.+|-+++ .....
T Consensus 48 dg~~l~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~-~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 48 DKRYLYVGVRPEF---RVLAYRIAPDDGALTFAAESALPGSL--THISTDHQGQFVFVGS-YNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp TSSEEEEEETTTT---EEEEEEECTTTCCEEEEEEEECSSCC--SEEEECTTSSEEEEEE-TTTTEEEEEEEETTEEEEE
T ss_pred CCCEEEEeecCCC---eEEEEEecCCCCceeeccccccCCCC--cEEEEcCCCCEEEEEe-cCCCeEEEEECCCCccccc
Confidence 565 555444322 67777776 6666543 22221111 1222 23566444443 2467899999854 23333
Q ss_pred EEEEcCCCcceeceEEEECCeEEE-Ee-eCCEEEEEeCCC-CeEEEE
Q 045735 296 QFTIGPFIEAYNPLGLWKNGEIFL-ES-SDGQLLLYDPNA-QEMRDL 339 (378)
Q Consensus 296 ~~~i~~~~~~~~~~~~~~~g~ill-~~-~~~~~~~yd~~t-~~~~~v 339 (378)
...+.... ...-+.+..+|+.++ .. .++.+..||+++ ++++.+
T Consensus 122 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 122 VDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp EEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred cccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 34443222 123345556776444 44 577899999988 766543
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=56.59 E-value=63 Score=28.22 Aligned_cols=94 Identities=11% Similarity=-0.017 Sum_probs=52.8
Q ss_pred EEEEEECCCceeeeeC-CCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC-CCcceeceEEEE
Q 045735 237 VIISFDLSDEVIQEIE-SPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP-FIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~-~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~-~~~~~~~~~~~~ 313 (378)
.|..+|+.+.+...+. ...... . ..+. .-+|.+.+... ....+.||-+....-. ...+.. ...-..-+.+.+
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~-i-~~~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVE-Y-SSGVLHKDSLLLALYS--PDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCC-C-CEEEECTTSCEEEEEC--TTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECT
T ss_pred cEEEEECCCCcEEEEEecCCCCc-e-EEEEECCCCCEEEEEc--CCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeC
Confidence 7889999877664332 221111 1 1111 22566655444 6789999988762111 012222 222233345556
Q ss_pred CCeEEEEeeCCEEEEEeCCCCe
Q 045735 314 NGEIFLESSDGQLLLYDPNAQE 335 (378)
Q Consensus 314 ~g~ill~~~~~~~~~yd~~t~~ 335 (378)
+|..++...++.+.+||+++.+
T Consensus 225 ~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 225 NGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp TSSEEEEEESSBEEEEETTSST
T ss_pred CCCEEEEEeCCeEEEEEcCCCC
Confidence 7887777556689999998864
No 101
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=56.15 E-value=1e+02 Score=26.79 Aligned_cols=205 Identities=10% Similarity=0.011 Sum_probs=93.7
Q ss_pred cccceEEEEeC--CceEEEEecccc--ceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 111 PYEGIFCLMNG--NKYISLWNLATQ--ELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 111 s~~GLll~~~~--~~~~~V~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
..+|-+.+.+. ..+ .++||..+ ....+........ +........++.+|+..+..-|.- .. ..
T Consensus 99 d~~g~l~v~d~~~~~v-~~~~~~g~~~~~~~~~~~~~~g~-~~~~~~~P~~ia~~~~~g~lyv~d-----~~------~~ 165 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQV-FKLDPHSKEGPLLILGRSMQPGS-DQNHFCQPTDVAVEPSTGAVFVSD-----GY------CN 165 (329)
T ss_dssp CTTSCEEEEETTTTEE-EEECTTCSSCCSEEESBTTBCCC-STTCCSSEEEEEECTTTCCEEEEE-----CS------SC
T ss_pred CCCCCEEEEECCCCEE-EEEeCCCCeEEEEEecccCCCCC-CccccCCCcEEEEeCCCCeEEEEe-----CC------CC
Confidence 44666655553 355 88888665 2333322111000 001123456788887443322211 00 13
Q ss_pred eeEEEEEcCCCCcccccCCC---CCCCccccCCCceEE--C-ceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCC
Q 045735 187 SHIAVYNLSTDSWRGFRGFK---LGRDYVCGRIDSTYW--N-GVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPEL 259 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~---~~~~~~~~~~~~v~~--~-G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~ 259 (378)
..+.+|+.....-+...... ...+.....+.++.+ + |.+|....... .|..||..++++ ..+..+.....
T Consensus 166 ~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~---~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 166 SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG---RIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT---EEEEEETTTCCEEEEECCTTTTTC
T ss_pred CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC---EEEEEECCCCcEEEEEeccccCCC
Confidence 45666664333222221100 000111222355666 4 88888765554 899999985554 45554432211
Q ss_pred CcccEEEECCeEEEEE-----ecCCCCEEEEEEEcCCeeEEEEEEcCC-Ccceec--eEEEECCeEEEEe-eCCEEEEEe
Q 045735 260 THGPLGLYDNSLSLIA-----LDEIKKCYQLWVLKERCWIKQFTIGPF-IEAYNP--LGLWKNGEIFLES-SDGQLLLYD 330 (378)
Q Consensus 260 ~~~~l~~~~g~L~~~~-----~~~~~~~~~IW~L~~~~W~~~~~i~~~-~~~~~~--~~~~~~g~ill~~-~~~~~~~yd 330 (378)
...+....|.+.... .+.....+.+|-+...... ..+.+. ..+..| +++.++|.+++.. .++.+..|+
T Consensus 243 -~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~--~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 243 -VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII--DVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp -EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE--EEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred -cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE--EEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 112222223332221 1123346667765553322 334321 223344 4445577776663 455677777
Q ss_pred CCCC
Q 045735 331 PNAQ 334 (378)
Q Consensus 331 ~~t~ 334 (378)
++.+
T Consensus 320 ~~~~ 323 (329)
T 3fvz_A 320 LTEK 323 (329)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 6543
No 102
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=55.73 E-value=70 Score=31.66 Aligned_cols=111 Identities=15% Similarity=0.214 Sum_probs=60.6
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCc--eeeeeCCCCCCC--------CCcccEEEECCeEEEEEecCCCCEEEEE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDE--VIQEIESPCTPE--------LTHGPLGLYDNSLSLIALDEIKKCYQLW 286 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~i~~P~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~~~IW 286 (378)
.++..+|.+|...... .|.++|..++ .|+. ..+.... .....+...+|+|.+... ... |.
T Consensus 72 ~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~--l~ 141 (677)
T 1kb0_A 72 TPVVVDGIMYVSASWS----VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGR--LI 141 (677)
T ss_dssp CCEEETTEEEEECGGG----CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSE--EE
T ss_pred CCEEECCEEEEECCCC----eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC---CCE--EE
Confidence 5688899999887654 7999999765 4443 2221110 011223445677665322 233 33
Q ss_pred EEcC----CeeEEEEEEcCC--Ccc-eeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEE
Q 045735 287 VLKE----RCWIKQFTIGPF--IEA-YNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 287 ~L~~----~~W~~~~~i~~~--~~~-~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v 339 (378)
.|+- ..|......+.. ..+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 142 alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 4443 457653210110 111 23332 2667766543 47899999999986653
No 103
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=55.60 E-value=1e+02 Score=26.73 Aligned_cols=190 Identities=10% Similarity=0.120 Sum_probs=90.4
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCC--cc
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDS--WR 200 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~--W~ 200 (378)
.+ +++||.|++....-.. .......++.+|+..+ ++.. . . ....+.+|+..+.. =.
T Consensus 70 ~i-~~~d~~~g~~~~~~~~--------~~~~~p~gia~d~~g~---l~v~-d---~------~~~~v~~~~~~g~~~~~~ 127 (329)
T 3fvz_A 70 TI-LVIDPNNAEILQSSGK--------NLFYLPHGLSIDTDGN---YWVT-D---V------ALHQVFKLDPHSKEGPLL 127 (329)
T ss_dssp CE-EEECTTTCCEEEEECT--------TTCSSEEEEEECTTSC---EEEE-E---T------TTTEEEEECTTCSSCCSE
T ss_pred cE-EEEECCCCeEEeccCC--------CccCCceEEEECCCCC---EEEE-E---C------CCCEEEEEeCCCCeEEEE
Confidence 36 9999998887542111 1123345777786543 2222 1 1 13456777765431 11
Q ss_pred cccCC-CCCC-CccccCCCceEE---CceEEEEee-ecCCccEEEEEECCCceeeeeCCCCCC------CCC-cccEEEE
Q 045735 201 GFRGF-KLGR-DYVCGRIDSTYW---NGVCYWLAR-EEGENHVIISFDLSDEVIQEIESPCTP------ELT-HGPLGLY 267 (378)
Q Consensus 201 ~~~~~-~~~~-~~~~~~~~~v~~---~G~lywl~~-~~~~~~~il~fD~~~e~~~~i~~P~~~------~~~-~~~l~~~ 267 (378)
.+... .... ......+.++.+ +|.+|.... ... .|..||........+..+... ... ...+..-
T Consensus 128 ~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~---~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d 204 (329)
T 3fvz_A 128 ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS---RIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALV 204 (329)
T ss_dssp EESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC---EEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEE
T ss_pred EecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC---eEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEE
Confidence 11110 0000 011112245555 588988874 333 899999776655555322211 001 1223332
Q ss_pred -C-CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEE------CCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 268 -D-NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWK------NGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 268 -~-g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~------~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
+ |.|.+... ....+.+|-.+..+............-..-+.+.+ +|.+++. .....+..||.+++++..
T Consensus 205 ~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 205 PHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp TTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred CCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 4 77776554 56788888776433333222111111111111222 3333222 223468899988877654
Q ss_pred E
Q 045735 339 L 339 (378)
Q Consensus 339 v 339 (378)
.
T Consensus 283 ~ 283 (329)
T 3fvz_A 283 V 283 (329)
T ss_dssp E
T ss_pred E
Confidence 4
No 104
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=55.56 E-value=1e+02 Score=26.55 Aligned_cols=114 Identities=10% Similarity=-0.010 Sum_probs=60.4
Q ss_pred ECce-EEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCC-----Cc-ccEE-EECCeEEEEEecCCCCEEEEEEEcCC
Q 045735 221 WNGV-CYWLAREEGENHVIISFDLSDEVI-QEIESPCTPEL-----TH-GPLG-LYDNSLSLIALDEIKKCYQLWVLKER 291 (378)
Q Consensus 221 ~~G~-lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~-----~~-~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~ 291 (378)
-+|. +|....... .|..+|+.+.+. ..++.+..... .. ..+. .-+|+..++........+.+|-++.
T Consensus 98 ~dg~~l~v~~~~~~---~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~- 173 (353)
T 3vgz_A 98 NTTQTLWFGNTVNS---AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN- 173 (353)
T ss_dssp TTTTEEEEEETTTT---EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT-
T ss_pred CCCCEEEEEecCCC---EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC-
Confidence 3666 554444333 899999987655 55565432211 00 1122 2255543333322455666665443
Q ss_pred eeEEEEEEcCCCcceeceEEEECCeE-EEEeeCCEEEEEeCCCCeEEEE
Q 045735 292 CWIKQFTIGPFIEAYNPLGLWKNGEI-FLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 292 ~W~~~~~i~~~~~~~~~~~~~~~g~i-ll~~~~~~~~~yd~~t~~~~~v 339 (378)
...+..+.........+.+..+|+. ++...++.+..||+++++....
T Consensus 174 -~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 174 -IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp -TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred -CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 3344444422212233556667664 4445577899999999876543
No 105
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=55.24 E-value=1e+02 Score=29.46 Aligned_cols=112 Identities=8% Similarity=0.019 Sum_probs=64.6
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeee-eCCCCCCCC-CcccEEEEC-CeEEEEEecCCCCEEEEEEEcC-----Cee
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQE-IESPCTPEL-THGPLGLYD-NSLSLIALDEIKKCYQLWVLKE-----RCW 293 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~-~~~~l~~~~-g~L~~~~~~~~~~~~~IW~L~~-----~~W 293 (378)
+|...+....... .|..+|+.+.+... ++.....+. ....+..-+ |.+. +........+.||-++. ..|
T Consensus 334 dg~~l~va~~~~~--~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~-~s~~~~d~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 334 SHRYFMTAANNSN--KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVW-STSHLGDGSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp TSCEEEEEEGGGT--EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEE-EEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCCEEEEEecCCC--eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEE-EeccCCCceEEEEEeCCCCCchhcC
Confidence 5664444433222 78889999876643 443211111 112222223 5544 33323567899998876 249
Q ss_pred EEEEEEcCCCcceeceEEEECCeEEEEee--------CCEEEEEeCCCCeE
Q 045735 294 IKQFTIGPFIEAYNPLGLWKNGEIFLESS--------DGQLLLYDPNAQEM 336 (378)
Q Consensus 294 ~~~~~i~~~~~~~~~~~~~~~g~ill~~~--------~~~~~~yd~~t~~~ 336 (378)
..+.++.-...-...+.+.++|..+.... +..+.+||.+|.+.
T Consensus 411 ~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp SEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred eEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 98888874332223355566877766632 45799999998764
No 106
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=55.11 E-value=1.7e+02 Score=29.16 Aligned_cols=198 Identities=8% Similarity=0.083 Sum_probs=97.4
Q ss_pred eeecccceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccce
Q 045735 108 FVGPYEGIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFS 187 (378)
Q Consensus 108 ~~~s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (378)
+....+|.|-+.....+ ..+|+.|+++..++..... .... ...+..|+.. + +.+.. ..
T Consensus 93 i~~d~~g~lWigT~~Gl-~~yd~~~~~f~~~~~~~~~-----~~~~-i~~i~~d~~g---~-lwi~t-----------~~ 150 (795)
T 4a2l_A 93 VKTDSQGRVWIGTRDGL-SRYDEEKDIFQNFFYEKNG-----KHLQ-VNGIEEISPE---Q-LLIST-----------PE 150 (795)
T ss_dssp EEECTTSCEEEEESSCE-EEEETTTTEEEEECCEETT-----EECC-CCEEEEEETT---E-EEEEE-----------TT
T ss_pred EEECCCCCEEEEeCCch-heeCCCCCeEEeccccccC-----CCce-EEEEEECCCC---C-EEEEE-----------CC
Confidence 44566788877777778 9999999888776543211 0000 1222323211 1 22211 23
Q ss_pred eEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE
Q 045735 188 HIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG 265 (378)
Q Consensus 188 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~ 265 (378)
.+..|+..++.++.... ..+.. ..-..++. +|.+ |+..... .|..+|..++++..+............+.
T Consensus 151 gl~~~~~~~~~~~~~~~---~~~~~-~~i~~i~~d~~g~l-wigt~~~---Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~ 222 (795)
T 4a2l_A 151 GLIMFDIKESKFIDDSF---STAMH-KTIASTLYRQGDQI-YIGTSTD---GLYTYSITQKTFEKVIPILGTKQIQAILQ 222 (795)
T ss_dssp EEEEEETTTTEEECSSS---CHHHH-TCCEEEEEEETTEE-EEEESSS---CEEEEETTTCCEEECC----CCCEEEEEE
T ss_pred ceEEEECCCCEEEeccC---CCCCC-cceEEEEECCCCCE-EEEECCC---CEEEEeCCCCeEEEecCCCCCCeeEEEEE
Confidence 46677777766654432 11100 00122333 5664 4444322 68999999988876532111111111222
Q ss_pred EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC---C---CcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 266 LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP---F---IEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 266 ~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~---~---~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
..+|.|.+... ...+..+-.+...+.... ..+ . .....-+....+|.+.+-+.. .+..||.++++++.+
T Consensus 223 d~~g~lwigt~---~~Gl~~~~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~ 297 (795)
T 4a2l_A 223 QSPTRIWVATE---GAGLFLINPKTKEIKNYL-HSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASY 297 (795)
T ss_dssp EETTEEEEEEB---SSCEEEEETTTTEEEEEC-CCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEC---CCCeEEEeCCCCeEEEee-cCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEE
Confidence 34677766442 112333322224443321 111 0 111122333346888777765 699999999888766
Q ss_pred E
Q 045735 340 G 340 (378)
Q Consensus 340 ~ 340 (378)
.
T Consensus 298 ~ 298 (795)
T 4a2l_A 298 S 298 (795)
T ss_dssp C
T ss_pred e
Confidence 3
No 107
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=54.18 E-value=1.1e+02 Score=26.40 Aligned_cols=206 Identities=10% Similarity=-0.016 Sum_probs=98.7
Q ss_pred eecccceEEEEeC--CceEEEEecccccee-cCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccc
Q 045735 109 VGPYEGIFCLMNG--NKYISLWNLATQELR-RLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYD 185 (378)
Q Consensus 109 ~~s~~GLll~~~~--~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (378)
++..+..+.+... ..+ .++|+.|++.. .++......+. ........++.++|..+ + ++.. . . . .
T Consensus 96 ~s~dg~~l~v~~~~~~~v-~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~-~-l~~~-~-~-~------~ 162 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAV-TAIDAKTGEVKGRLVLDDRKRTE-EVRPLQPRELVADDATN-T-VYIS-G-I-G------K 162 (353)
T ss_dssp EETTTTEEEEEETTTTEE-EEEETTTCCEEEEEESCCCCCCS-SCCCCEEEEEEEETTTT-E-EEEE-E-E-S------S
T ss_pred ECCCCCEEEEEecCCCEE-EEEeCCCCeeEEEEecCCCcccc-ccCCCCCceEEECCCCC-E-EEEE-e-c-C------C
Confidence 3344444555543 356 99999998864 34332211100 00112235577777644 2 2221 1 1 1 1
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCccEEEEEECCCceee-eeCCCCCC-CCCccc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTP-ELTHGP 263 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~-~~~~~~ 263 (378)
...+.+|+..++.=...-......+. .-.+.-+|...+....+. .|..+|+.+.+.. .+..+... ......
T Consensus 163 ~~~i~~~d~~~~~~~~~~~~~~~~~~----~~~~s~dg~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQNTGKMST----GLALDSEGKRLYTTNADG---ELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp SCEEEEEETTTTEEEEEECCCCTTCC----CCEEETTTTEEEEECTTS---EEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred CceEEEEcCCCCceEEEecCCCCccc----eEEECCCCCEEEEEcCCC---eEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 34577888776532111000000010 012222565444443333 7889999887654 44543221 111112
Q ss_pred EEE-ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCe-EEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 264 LGL-YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGE-IFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 264 l~~-~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~-ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
+.. -+|+..++.. .....+.+|-++..+-.....++ . ..-+.+..+|+ +++.. .++.+..||.++++....
T Consensus 236 ~~~s~dg~~l~~~~-~~~~~v~~~d~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 236 ISLDTARQRAFITD-SKAAEVLVVDTRNGNILAKVAAP--E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EEEETTTTEEEEEE-SSSSEEEEEETTTCCEEEEEECS--S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEe-CCCCEEEEEECCCCcEEEEEEcC--C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 222 2455333333 24578888866553333322222 1 12355666776 44444 467899999999886543
No 108
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=53.85 E-value=1.1e+02 Score=26.43 Aligned_cols=108 Identities=10% Similarity=0.008 Sum_probs=62.8
Q ss_pred ECceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEE
Q 045735 221 WNGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTI 299 (378)
Q Consensus 221 ~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i 299 (378)
.+|.+|--+...+ .|..+|+.+++. +.+ +|... ..-.+...+++|.+... ... .+|+.+-..-..+.+|
T Consensus 63 ~~~~Ly~stG~~g---~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw--~~~--~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 63 HQGHFFESTGHQG---TLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTW--TEG--LLFTWSGMPPQRERTT 132 (268)
T ss_dssp ETTEEEEEETTTT---EEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEES--SSC--EEEEEETTTTEEEEEE
T ss_pred ECCEEEEEcCCCC---EEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEc--cCC--EEEEEECCcCcEEEEE
Confidence 3567776665554 699999988755 445 66532 11234455777776543 333 3455554344455555
Q ss_pred cCCCcceeceEEEECCe-EEEEeeCCEEEEEeCCCCeE-EEEEE
Q 045735 300 GPFIEAYNPLGLWKNGE-IFLESSDGQLLLYDPNAQEM-RDLGL 341 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~g~-ill~~~~~~~~~yd~~t~~~-~~v~~ 341 (378)
.... ...++..+++ +++..++.++..+|++|.+. +.|..
T Consensus 133 ~~~~---eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 133 RYSG---EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ECSS---CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred eCCC---ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 5422 2345544444 55556678899999999654 34443
No 109
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=53.61 E-value=1.1e+02 Score=26.54 Aligned_cols=185 Identities=11% Similarity=0.045 Sum_probs=90.2
Q ss_pred eEEEEeCCceEEEEeccccceecC-CCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEE
Q 045735 115 IFCLMNGNKYISLWNLATQELRRL-PKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYN 193 (378)
Q Consensus 115 Lll~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 193 (378)
.|++.....+ .+.++.+++...+ |.. ....++.+|+..+. +.... . ....+..++
T Consensus 3 ~ll~~~~~~I-~~i~~~~~~~~~~~~~~-----------~~p~g~~~d~~~~~--ly~~D---~-------~~~~I~~~~ 58 (316)
T 1ijq_A 3 YLFFTNRHEV-RKMTLDRSEYTSLIPNL-----------RNVVALDTEVASNR--IYWSD---L-------SQRMICSTQ 58 (316)
T ss_dssp EEEEECBSSE-EEEETTSCCCEEEECSC-----------SSEEEEEEETTTTE--EEEEE---T-------TTTEEEEEE
T ss_pred EEEEECCCeE-EEEECCCcceEehhcCC-----------CceEEEEEEeCCCE--EEEEE---C-------CCCcEEEEE
Confidence 3555656666 7888877765443 221 23467788875542 32221 1 134556666
Q ss_pred cCCC---Cc-ccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE
Q 045735 194 LSTD---SW-RGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL 266 (378)
Q Consensus 194 s~~~---~W-~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 266 (378)
..+. +- +.+- ... ...+.++.+ +|.+||...... .|..+|+.......+--. .. .....+..
T Consensus 59 ~~g~~~~~~~~~~~--~~~----~~~p~glavd~~~~~ly~~d~~~~---~I~~~~~~g~~~~~~~~~-~~-~~P~~iav 127 (316)
T 1ijq_A 59 LDRAHGVSSYDTVI--SRD----IQAPDGLAVDWIHSNIYWTDSVLG---TVSVADTKGVKRKTLFRE-NG-SKPRAIVV 127 (316)
T ss_dssp C--------CEEEE--CSS----CSCCCEEEEETTTTEEEEEETTTT---EEEEEETTSSSEEEEEEC-TT-CCEEEEEE
T ss_pred CCCCCCCcccEEEE--eCC----CCCcCEEEEeecCCeEEEEECCCC---EEEEEeCCCCceEEEEEC-CC-CCcceEEe
Confidence 5541 11 1110 001 112244544 689999876554 899999986544333111 11 11123333
Q ss_pred --ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEE--EE-CCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 267 --YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGL--WK-NGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 267 --~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~--~~-~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
.+|.|.+.... ... .|++.+- .+-.+.. +. ..+..|.++ .. ++.+++.. ..+.+..+|++++..+.+
T Consensus 128 dp~~g~ly~~d~~-~~~--~I~~~~~dG~~~~~~-~~--~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 128 DPVHGFMYWTDWG-TPA--KIKKGGLNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp ETTTTEEEEEECS-SSC--EEEEEETTSCCEEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCCEEEEEccC-CCC--eEEEEcCCCCCeEEE-EE--CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 36677665431 112 4555543 2222211 11 124455444 32 46666653 356799999887665555
Q ss_pred E
Q 045735 340 G 340 (378)
Q Consensus 340 ~ 340 (378)
.
T Consensus 202 ~ 202 (316)
T 1ijq_A 202 L 202 (316)
T ss_dssp E
T ss_pred e
Confidence 3
No 110
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=53.42 E-value=1.2e+02 Score=30.09 Aligned_cols=113 Identities=14% Similarity=0.168 Sum_probs=61.3
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCc--eeeeeCCCCCCC--------CCcccEEEECCeEEEEEecCCCCEEEEE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDE--VIQEIESPCTPE--------LTHGPLGLYDNSLSLIALDEIKKCYQLW 286 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~i~~P~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~~~IW 286 (378)
.++..+|.+|...... .|.++|..++ .|+. ..+.... .....+...+|++.+... ...+.-+
T Consensus 65 ~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg~l~Al 136 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFS----VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DGRLEAI 136 (689)
T ss_dssp CCEEETTEEEEECGGG----CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEEE
T ss_pred cCEEECCEEEEEcCCC----eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEcc---CCEEEEE
Confidence 5678899999887654 6999999654 5553 2221110 001223445777665332 2333333
Q ss_pred EEcC--CeeEEEEEEcCCC--cc-eeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEE
Q 045735 287 VLKE--RCWIKQFTIGPFI--EA-YNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 287 ~L~~--~~W~~~~~i~~~~--~~-~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v 339 (378)
-.+. ..|......++.. .+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 137 DAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 2222 4577643212111 11 23433 2677766532 46899999999986543
No 111
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=53.04 E-value=1.2e+02 Score=26.66 Aligned_cols=110 Identities=12% Similarity=0.093 Sum_probs=56.1
Q ss_pred CceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCC---------CCCc-ccEE-EECCeEEEEEecCCCCEEEEEEEc
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTP---------ELTH-GPLG-LYDNSLSLIALDEIKKCYQLWVLK 289 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~---------~~~~-~~l~-~~~g~L~~~~~~~~~~~~~IW~L~ 289 (378)
+|.+......+.....|..+|+.+.+. ..+..|... .... ..+. .-+|++.+... ....+.||-+.
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~ 321 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG--WDGKLRFWDVK 321 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE--TTSEEEEEETT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe--CCCeEEEEEcC
Confidence 455444444430001799999976543 444443210 0111 1121 12466555444 57799999887
Q ss_pred CCeeEEEEEEc------CC---------------CcceeceEEEECC----------eEEEE-eeCCEEEEEeCCCCe
Q 045735 290 ERCWIKQFTIG------PF---------------IEAYNPLGLWKNG----------EIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 290 ~~~W~~~~~i~------~~---------------~~~~~~~~~~~~g----------~ill~-~~~~~~~~yd~~t~~ 335 (378)
.. ..+..+. .. .....-+.+.++| .+++. ..++.+.+||+++++
T Consensus 322 ~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 322 TK--ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TT--EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CC--ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 63 3333343 11 1122334555666 56555 568899999998864
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=52.61 E-value=1.3e+02 Score=26.83 Aligned_cols=145 Identities=9% Similarity=0.050 Sum_probs=73.5
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCC-CceEE--CceEEEEeeecCCccEEEEEECCCceeee-e-CCCCCCCCCc
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQE-I-ESPCTPELTH 261 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i-~~P~~~~~~~ 261 (378)
..+.+|+..++.....-... ... .. .++.+ +|........++ .|..+|+.+.+... + .........
T Consensus 154 g~i~iwd~~~~~~~~~~~~~-~~~----~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~- 224 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPD-VHP----DTIYSVDWSRDGALICTSCRDK---RVRVIEPRKGTVVAEKDRPHEGTRPV- 224 (402)
T ss_dssp SCEEEEETTTTEEEEEECTT-TCC----SCEEEEEECTTSSCEEEEETTS---EEEEEETTTTEEEEEEECSSCSSSCC-
T ss_pred CEEEEEECCCCCccEEEecC-CCC----CceEEEEECCCCCEEEEEecCC---cEEEEeCCCCceeeeeccCCCCCcce-
Confidence 45788888876432211000 000 01 22333 455444444433 89999998765533 2 222111011
Q ss_pred ccEEEECCeEEEEEe-cCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEECCeEEEE-e-eCCEEEEEeCCCCe--
Q 045735 262 GPLGLYDNSLSLIAL-DEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-S-SDGQLLLYDPNAQE-- 335 (378)
Q Consensus 262 ~~l~~~~g~L~~~~~-~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~-~~~~~~~yd~~t~~-- 335 (378)
.....-+|++.+... ......+.||-+.. ..=.....++.... ..-+.+..++..++. . .++.+.+||+++++
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG-VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS-CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc-eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc
Confidence 111223677655542 13678999998876 22122222222221 222345557776654 3 47789999999987
Q ss_pred EEEEEE
Q 045735 336 MRDLGL 341 (378)
Q Consensus 336 ~~~v~~ 341 (378)
++.+..
T Consensus 304 ~~~l~~ 309 (402)
T 2aq5_A 304 LHYLSM 309 (402)
T ss_dssp EEEEEE
T ss_pred eEeecc
Confidence 665543
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=52.47 E-value=1.1e+02 Score=26.22 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=20.4
Q ss_pred eEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 309 LGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 309 ~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
+.+.+++.+++. ..++.+.+||+++++..
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 344456766665 55778999999987653
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=52.40 E-value=80 Score=33.40 Aligned_cols=133 Identities=9% Similarity=0.082 Sum_probs=65.6
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHG 262 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~ 262 (378)
...+.+|+..++............ .++.+ +|.+.- ...++ .|..+|+.+.+.. .+...... . .
T Consensus 1024 dg~i~vwd~~~~~~~~~~~~~~~v-------~~~~~~~~~~l~~-~~~dg---~v~vwd~~~~~~~~~~~~~~~~--v-~ 1089 (1249)
T 3sfz_A 1024 DSVIQVWNWQTGDYVFLQAHQETV-------KDFRLLQDSRLLS-WSFDG---TVKVWNVITGRIERDFTCHQGT--V-L 1089 (1249)
T ss_dssp SSBEEEEETTTTEEECCBCCSSCE-------EEEEECSSSEEEE-EESSS---EEEEEETTTTCCCEEEECCSSC--C-C
T ss_pred CCEEEEEECCCCceEEEecCCCcE-------EEEEEcCCCcEEE-EECCC---cEEEEECCCCceeEEEcccCCc--E-E
Confidence 346788888887655433211000 11111 343322 22222 7889999776542 22211111 1 1
Q ss_pred cEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeE
Q 045735 263 PLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEM 336 (378)
Q Consensus 263 ~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~ 336 (378)
.+. .-+|+..+... ....+.||-++... ....+........-+.+..+|.+++. ..++.+.+||+++++.
T Consensus 1090 ~~~~s~d~~~l~s~s--~d~~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1090 SCAISSDATKFSSTS--ADKTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp CEEECSSSSSCEEEC--CSSCCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCC
T ss_pred EEEECCCCCEEEEEc--CCCcEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 111 22455444333 46778999776511 11111111112233445567777665 4567899999998764
No 115
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=52.13 E-value=1.4e+02 Score=27.12 Aligned_cols=93 Identities=12% Similarity=0.200 Sum_probs=56.9
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG 315 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g 315 (378)
.|..+|+.+++.. .+.... ........++...+... ....+.||-+.+.. +...... ......+.+..++
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~s~s--~dg~v~vwd~~~~~--~~~~~~~-~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHT----ALVGLLRLSDKFLVSAA--ADGSIRGWDANDYS--RKFSYHH-TNLSAITTFYVSD 403 (464)
T ss_dssp CEEEEETTTTEEEEEECCCS----SCEEEEEECSSEEEEEE--TTSEEEEEETTTCC--EEEEEEC-TTCCCEEEEEECS
T ss_pred cEEEEECCCCcEEEEEeCCC----CcEEEEEEcCCEEEEEe--CCCcEEEEECCCCc--eeeeecC-CCCccEEEEEeCC
Confidence 6888898776543 232211 11233344566555444 57789999887722 2222221 2233445667788
Q ss_pred eEEEEeeCCEEEEEeCCCCeEEE
Q 045735 316 EIFLESSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 316 ~ill~~~~~~~~~yd~~t~~~~~ 338 (378)
.+++...++.+.+||+++++...
T Consensus 404 ~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 404 NILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SEEEEEETTEEEEEETTTCCEEE
T ss_pred CEEEEecCCeEEEEECCCCcEEe
Confidence 88887778899999999988654
No 116
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=52.10 E-value=1.1e+02 Score=25.94 Aligned_cols=195 Identities=11% Similarity=0.111 Sum_probs=93.9
Q ss_pred cccceEEEEeCC-ceEEEEeccccceec-CCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccccee
Q 045735 111 PYEGIFCLMNGN-KYISLWNLATQELRR-LPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSH 188 (378)
Q Consensus 111 s~~GLll~~~~~-~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (378)
+.+|-+++...+ .+ .|||..+++... +...... ........+.+.|.. .+ +... .. .-.
T Consensus 60 ~~~~~~l~~~~dg~i-~iw~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~-~~--l~~~---~~-------d~~ 120 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCV-KVWDISHPGNKSPVSQLDCL-----NRDNYIRSCKLLPDG-CT--LIVG---GE-------AST 120 (337)
T ss_dssp CSSSSEEEEECBSEE-EEEETTSTTCCSCSEEEECS-----CTTSBEEEEEECTTS-SE--EEEE---ES-------SSE
T ss_pred ecCCcEEEEcCCCeE-EEEECCCCCceeeeeccccc-----CCCCcEEEEEEcCCC-CE--EEEE---cC-------CCc
Confidence 445544444334 55 999988765332 1111100 011234456666643 22 2221 11 346
Q ss_pred EEEEEcCCCCcccccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccEE
Q 045735 189 IAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPLG 265 (378)
Q Consensus 189 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~ 265 (378)
+.+|+..++...........-... .++.+ +|........++ .|..+|+.+.+.. .+..... .-..+.
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~~~~~dg---~v~~~d~~~~~~~~~~~~~~~---~i~~~~ 190 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPAC----YALAISPDSKVCFSCCSDG---NIAVWDLHNQTLVRQFQGHTD---GASCID 190 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCE----EEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCCSS---CEEEEE
T ss_pred EEEEECCCCCcceeeecccCCCce----EEEEECCCCCEEEEEeCCC---cEEEEeCCCCceeeeeecccC---ceEEEE
Confidence 888988887644332211010000 12222 455444444433 6889999876543 2322111 101121
Q ss_pred E-ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 266 L-YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 266 ~-~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
. -+|+..+... ....+.+|-++... ....+.... -..-+.+.+++..++. ..++.+..||+++++...+
T Consensus 191 ~~~~~~~l~~~~--~dg~i~~~d~~~~~--~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 191 ISNDGTKLWTGG--LDNTVRSWDLREGR--QLQQHDFTS-QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTE--EEEEEECSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred ECCCCCEEEEEe--cCCcEEEEECCCCc--eEeeecCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 1 2565555444 57789999877632 222222211 1223444556776655 4577899999998876544
No 117
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.90 E-value=1.5e+02 Score=27.33 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=64.3
Q ss_pred CCceEEC----ceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCe-EEEEEecC-CCCEEEEEEE
Q 045735 216 IDSTYWN----GVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNS-LSLIALDE-IKKCYQLWVL 288 (378)
Q Consensus 216 ~~~v~~~----G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~-L~~~~~~~-~~~~~~IW~L 288 (378)
+.++.++ |.+|+..... .|..||+.+.+...+..+ . .....+. ..+|+ |.+..... ......+|..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~----~I~~id~~~~~v~~~~~~-~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQH----PTRLIDFEKEYVSTVYSG-L--SKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTE----EEEEEETTTTEEEEEECC-C--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCEEEECCCCCCeEEEEeCCC----cEEEEECCCCEEEEEecC-C--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 3556655 8899887652 899999999877665321 1 1112232 23566 66554322 2234455555
Q ss_pred cCCeeEEEEEEcCCCcceec--eEEEE-CCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 289 KERCWIKQFTIGPFIEAYNP--LGLWK-NGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 289 ~~~~W~~~~~i~~~~~~~~~--~~~~~-~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
.+..|.....+.. +..| +++.+ +|.+++.. ..+++..||+++++...+
T Consensus 212 ~~g~~~~~~~l~~---~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 212 RESGFKVITELTK---GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GGGTSCSEEEEEE---CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCceeeeeeecc---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 5544432222221 2233 44555 67777764 467899999998876443
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=51.72 E-value=1.3e+02 Score=26.82 Aligned_cols=110 Identities=11% Similarity=-0.028 Sum_probs=59.7
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCC-CCCC-CCcccEEE--ECCeEEEEEecCCCCEEEEEEEcCCeeEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESP-CTPE-LTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKERCWIKQF 297 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P-~~~~-~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~ 297 (378)
+|.++.....+. .|..+|+.+.+......+ .... .....-+. -+|++.+... ....+.+|-++...-. .
T Consensus 133 ~~~~~~~~~~~~---~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~--~d~~v~~~d~~~~~~~--~ 205 (433)
T 3bws_A 133 NTRLAIPLLEDE---GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM--QANAVHVFDLKTLAYK--A 205 (433)
T ss_dssp SSEEEEEBTTSS---SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG--GGTEEEEEETTTCCEE--E
T ss_pred CCeEEEEeCCCC---eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC--CCCEEEEEECCCceEE--E
Confidence 555555544333 689999988766543211 1001 11111122 2667665544 5678999987762222 2
Q ss_pred EEcCCCcceeceEEEECCeEEEE-e-eCCEEEEEeCCCCeEEE
Q 045735 298 TIGPFIEAYNPLGLWKNGEIFLE-S-SDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 298 ~i~~~~~~~~~~~~~~~g~ill~-~-~~~~~~~yd~~t~~~~~ 338 (378)
.+........-+.+.+++..++. . .++.+..||+++++...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 23222222333455566765544 3 46789999999887643
No 119
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=51.66 E-value=1.4e+02 Score=26.96 Aligned_cols=207 Identities=11% Similarity=0.058 Sum_probs=99.4
Q ss_pred ecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccce
Q 045735 110 GPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFS 187 (378)
Q Consensus 110 ~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (378)
+..+|.|...+. ..+ ..+++.++....+-.... ....++.+|+..+. +.... . ...
T Consensus 124 d~~~~~ly~~D~~~~~I-~r~~~~g~~~~~~~~~~~---------~~p~glavd~~~g~--lY~~d----~------~~~ 181 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRI-LRANLNGSNVEEVVSTGL---------ESPGGLAVDWVHDK--LYWTD----S------GTS 181 (386)
T ss_dssp ETTTTEEEEEETTTTEE-EEEETTSCCEEEEECSSC---------SCCCCEEEETTTTE--EEEEE----T------TTT
T ss_pred ecCCCeEEEEeCCCCcE-EEEecCCCCcEEEEeCCC---------CCccEEEEEeCCCe--EEEEc----C------CCC
Confidence 345677776653 355 788887765443322211 12246666765442 22221 1 133
Q ss_pred eEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccE
Q 045735 188 HIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPL 264 (378)
Q Consensus 188 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l 264 (378)
.+++++..+..-+.+... . ...+.++.+ +|.+||....... .|..+|+....-..+-. .... ....|
T Consensus 182 ~I~~~~~dg~~~~~l~~~--~----l~~P~giavdp~~g~ly~td~~~~~--~I~r~~~dG~~~~~~~~-~~~~-~PnGl 251 (386)
T 3v65_B 182 RIEVANLDGAHRKVLLWQ--S----LEKPRAIALHPMEGTIYWTDWGNTP--RIEASSMDGSGRRIIAD-THLF-WPNGL 251 (386)
T ss_dssp EEEECBTTSCSCEEEECS--S----CSCEEEEEEETTTTEEEEEECSSSC--EEEEEETTSCSCEEEEC-SSCS-CEEEE
T ss_pred eEEEEeCCCCceEEeecC--C----CCCCcEEEEEcCCCeEEEeccCCCC--EEEEEeCCCCCcEEEEE-CCCC-CeeeE
Confidence 556666654332222110 1 112244444 5899998765522 89999997654333311 1110 11223
Q ss_pred EE--ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEE-ECCeEEEEe-eCCEEEEEeCCCC-eEEE
Q 045735 265 GL--YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLW-KNGEIFLES-SDGQLLLYDPNAQ-EMRD 338 (378)
Q Consensus 265 ~~--~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~-~~g~ill~~-~~~~~~~yd~~t~-~~~~ 338 (378)
.. .+|+|.+... ... .|++.+- ..-.+.. +. ..+..|.++. .++.+++.. ..+.+..+|..++ ..+.
T Consensus 252 avd~~~~~lY~aD~--~~~--~I~~~d~dG~~~~~~-~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 252 TIDYAGRRMYWVDA--KHH--VIERANLDGSHRKAV-IS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEEGGGTEEEEEET--TTT--EEEEECTTSCSCEEE-EC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEeCCCCEEEEEEC--CCC--EEEEEeCCCCeeEEE-EE--CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 33 3677777654 334 4555543 2111111 11 1244666554 356666653 4678999995554 4444
Q ss_pred EEEecee-EEEEEeeecc
Q 045735 339 LGLRGLW-FYVHCFRESL 355 (378)
Q Consensus 339 v~~~~~~-~~~~~y~~sl 355 (378)
+...... ..+..|-+..
T Consensus 325 i~~~~~~p~gi~v~~~~~ 342 (386)
T 3v65_B 325 IRNKLHFPMDIHTLHPQR 342 (386)
T ss_dssp EECSCSCCCCEEEESGGG
T ss_pred EccCCCCCceEEEEchhc
Confidence 4322111 3455555443
No 120
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=51.62 E-value=1.2e+02 Score=26.13 Aligned_cols=138 Identities=15% Similarity=0.100 Sum_probs=77.7
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCC-ceEECceEEEEeeecCCccEEEEEECCCc-eeeeeCCCCCCCCCccc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRID-STYWNGVCYWLAREEGENHVIISFDLSDE-VIQEIESPCTPELTHGP 263 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~il~fD~~~e-~~~~i~~P~~~~~~~~~ 263 (378)
...+.+++..++.=...-. ++... +.. -...++.+|-++.... .+..||..+. ....++.|.. . ..
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~----l~~~~-FgeGit~~g~~ly~ltw~~~---~v~v~D~~t~~~~~ti~~~~e--G--~g 131 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIE----LGKRY-FGEGISDWKDKIVGLTWKNG---LGFVWNIRNLRQVRSFNYDGE--G--WG 131 (262)
T ss_dssp EEEEEEECTTTCCEEEEEE----CCTTC-CEEEEEEETTEEEEEESSSS---EEEEEETTTCCEEEEEECSSC--C--CC
T ss_pred CceEEEEECCCCcEEEEEe----cCCcc-ceeEEEEeCCEEEEEEeeCC---EEEEEECccCcEEEEEECCCC--c--eE
Confidence 5678888888875322211 11111 112 2445678888877664 8999999875 4466777642 1 33
Q ss_pred EEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCC---ccee--ceEEEECCeEEEEe-eCCEEEEEeCCCCeEE
Q 045735 264 LGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFI---EAYN--PLGLWKNGEIFLES-SDGQLLLYDPNAQEMR 337 (378)
Q Consensus 264 l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~---~~~~--~~~~~~~g~ill~~-~~~~~~~yd~~t~~~~ 337 (378)
|..-+++|.+.. .. =.||+++-..=..+.+|.... .+.. -+.. .+|.++... ..+.+...|++|+++.
T Consensus 132 lt~dg~~L~~Sd---Gs--~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 132 LTHNDQYLIMSD---GT--PVLRFLDPESLTPVRTITVTAHGEELPELNELEW-VDGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp EEECSSCEEECC---SS--SEEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTSSEEEEECTTTCBEE
T ss_pred EecCCCEEEEEC---CC--CeEEEEcCCCCeEEEEEEeccCCccccccceeEE-ECCEEEEEEccCCeEEEEECCCCcEE
Confidence 444355666522 12 248888762222333343211 0111 1332 388887664 4678999999999875
Q ss_pred E-EEE
Q 045735 338 D-LGL 341 (378)
Q Consensus 338 ~-v~~ 341 (378)
. |..
T Consensus 206 ~~Id~ 210 (262)
T 3nol_A 206 GIIDL 210 (262)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 4 444
No 121
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=51.23 E-value=17 Score=26.95 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=29.1
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEE
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLIL 173 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 173 (378)
.+ ++.+|.|++|. |.... .....+.+..|+..+.|+|+...
T Consensus 12 ~V-~~~d~~~~~W~--p~~~~-------~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AV-MVYDDANKKWV--PAGGS-------TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EE-EEEETTTTEEE--EGGGC-------CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EE-EEEcCCCCceE--ECCCC-------CCceEEEEEEECCCCEEEEEEEE
Confidence 45 89999999765 33321 12345788889888899999874
No 122
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=50.84 E-value=2.1e+02 Score=28.90 Aligned_cols=114 Identities=10% Similarity=0.015 Sum_probs=62.9
Q ss_pred CceEEC---ceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE--ECCeEEEEEecCCCCEEEEEEEcC-
Q 045735 217 DSTYWN---GVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKE- 290 (378)
Q Consensus 217 ~~v~~~---G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~- 290 (378)
.++.++ |.|||...... .|..+|+....-..+-.. .. .....|++ .+|.|++.... ... .|++.+-
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~---~I~v~~ldG~~~~~l~~~-~l-~~P~gIaVDp~~g~LYwtD~g-~~~--~I~~~~~d 545 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLG---TVSVADTKGVKRKTLFRE-NG-SKPRAIVVDPVHGFMYWTDWG-TPA--KIKKGGLN 545 (791)
T ss_dssp CEEEEETTTTEEEEEETTTT---EEEEEETTSSSEEEEEEC-TT-CCEEEEEEETTTTEEEEEECS-SSC--EEEEEETT
T ss_pred ceeeeeecCCcEEEEecCCC---eEEEEeCCCCeEEEEEeC-CC-CCcceEEEecCCCCEEEecCC-CCC--eEEEEecC
Confidence 556664 69999986654 899999986554443211 11 11123443 35777765532 223 3555543
Q ss_pred CeeEEEEEEcCCCcceeceEEE---ECCeEEEEe-eCCEEEEEeCCCCeEEEEEE
Q 045735 291 RCWIKQFTIGPFIEAYNPLGLW---KNGEIFLES-SDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 291 ~~W~~~~~i~~~~~~~~~~~~~---~~g~ill~~-~~~~~~~yd~~t~~~~~v~~ 341 (378)
+.-.+ .+.. ..+..|.++. .++.||+.. +...|..+|++.+..+.+..
T Consensus 546 G~~~~--~lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~ 597 (791)
T 3m0c_C 546 GVDIY--SLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 597 (791)
T ss_dssp SCCEE--EEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred CCceE--EEEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec
Confidence 22111 1111 2345676554 256676663 45689999998877666643
No 123
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=50.14 E-value=1.1e+02 Score=25.54 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=57.9
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQ 296 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~ 296 (378)
.++..+|........++ .|..+|. .+....+...... .........++.+.+... ....+.+|-.. ...
T Consensus 108 ~~~~~~~~~l~~~~~d~---~i~~~d~-~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~--~d~~i~i~d~~----~~~ 176 (313)
T 3odt_A 108 CSLSFQDGVVISGSWDK---TAKVWKE-GSLVYNLQAHNAS-VWDAKVVSFSENKFLTAS--ADKTIKLWQND----KVI 176 (313)
T ss_dssp EEEEEETTEEEEEETTS---EEEEEET-TEEEEEEECCSSC-EEEEEEEETTTTEEEEEE--TTSCEEEEETT----EEE
T ss_pred EEEEecCCEEEEEeCCC---CEEEEcC-CcEEEecccCCCc-eeEEEEccCCCCEEEEEE--CCCCEEEEecC----ceE
Confidence 44555666555444443 7888882 2222233221110 000111122566555544 56789999622 122
Q ss_pred EEEcC-CCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEE
Q 045735 297 FTIGP-FIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 297 ~~i~~-~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~ 338 (378)
..+.. ......-+.+.+++.++....++.+.+||+++++...
T Consensus 177 ~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 177 KTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp EEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhh
Confidence 22222 2223344556678885555778899999999876443
No 124
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=50.10 E-value=1.7e+02 Score=27.65 Aligned_cols=185 Identities=15% Similarity=0.109 Sum_probs=93.5
Q ss_pred ceEEEEe-CCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEE
Q 045735 114 GIFCLMN-GNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVY 192 (378)
Q Consensus 114 GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (378)
++++... .+.. .|+|..|++.+.+...+. ..+.++|.. .+- +.... ... ....+.++
T Consensus 123 ~~~~~s~~~~~~-~l~d~~~g~~~~l~~~~~------------~~~~~spDG-~~l-a~~~~-~~~------~~~~i~~~ 180 (582)
T 3o4h_A 123 AVVFTGATEDRV-ALYALDGGGLRELARLPG------------FGFVSDIRG-DLI-AGLGF-FGG------GRVSLFTS 180 (582)
T ss_dssp CEEEEEECSSCE-EEEEEETTEEEEEEEESS------------CEEEEEEET-TEE-EEEEE-EET------TEEEEEEE
T ss_pred eEEEEecCCCCc-eEEEccCCcEEEeecCCC------------ceEEECCCC-CEE-EEEEE-cCC------CCeEEEEE
Confidence 4555544 3466 789999988776643221 344455543 332 22221 111 13557888
Q ss_pred EcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccE--------
Q 045735 193 NLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPL-------- 264 (378)
Q Consensus 193 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l-------- 264 (378)
+..++.++.+.... ... ......=||...+....++ ...|..+|+.+.+...+ ...........
T Consensus 181 d~~~g~~~~l~~~~---~~~--~~~~~SpDG~~l~~~~~~~-~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 181 NLSSGGLRVFDSGE---GSF--SSASISPGMKVTAGLETAR-EARLVTVDPRDGSVEDL--ELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp ETTTCCCEEECCSS---CEE--EEEEECTTSCEEEEEECSS-CEEEEEECTTTCCEEEC--CCSCSHHHHHCCSEEEEEE
T ss_pred cCCCCCceEeecCC---Ccc--ccceECCCCCEEEEccCCC-eeEEEEEcCCCCcEEEc--cCCCcChhhhhhcccccee
Confidence 88888887664321 100 0011222666444332221 14799999998877622 22111111111
Q ss_pred EEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEEe-eC---CEEEEEeCCCCeEEEE
Q 045735 265 GLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLES-SD---GQLLLYDPNAQEMRDL 339 (378)
Q Consensus 265 ~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~-~~---~~~~~yd~~t~~~~~v 339 (378)
..-+|++.+... ....+.||.+ . +... .+.. ....+.+. +|.+++.. .+ ..++.+|.++ +.+++
T Consensus 253 ~spdg~~~~~~~--~~g~~~l~~~-g-~~~~----~~~~-~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 253 YLPDGRLAVVAR--REGRSAVFID-G-ERVE----APQG-NHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp ECTTSCEEEEEE--ETTEEEEEET-T-EEEC----CCSS-EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred EcCCCcEEEEEE--cCCcEEEEEE-C-Ceec----cCCC-ceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 234676655444 4568999988 3 2111 1111 22234555 78877652 22 4688888876 44443
No 125
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=49.78 E-value=1.1e+02 Score=25.42 Aligned_cols=139 Identities=6% Similarity=-0.049 Sum_probs=68.4
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHG 262 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 262 (378)
.-.+.+|+..++.-+.... .. ...+.++.+ +|.+||...... .|..+|+.......+. +... ....
T Consensus 57 ~~~I~~~~~~g~~~~~~~~--~~----~~~p~~ia~d~~~~~lyv~d~~~~---~I~~~~~~g~~~~~~~-~~~~-~~P~ 125 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIR--QD----LGSPEGIALDHLGRTIFWTDSQLD---RIEVAKMDGTQRRVLF-DTGL-VNPR 125 (267)
T ss_dssp TTEEEEEESSSCCCEEEEC--TT----CCCEEEEEEETTTTEEEEEETTTT---EEEEEETTSCSCEEEE-CSSC-SSEE
T ss_pred CCEEEEEecCCCCcEEEEE--CC----CCCccEEEEEecCCeEEEEECCCC---EEEEEEcCCCCEEEEE-ECCC-CCcc
Confidence 3456777776543222110 01 112244554 579999876554 8999999765433331 1111 1112
Q ss_pred cEEEE--CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceece--EEEEC-CeEEEEe-eCCEEEEEeCCCCeE
Q 045735 263 PLGLY--DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPL--GLWKN-GEIFLES-SDGQLLLYDPNAQEM 336 (378)
Q Consensus 263 ~l~~~--~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~--~~~~~-g~ill~~-~~~~~~~yd~~t~~~ 336 (378)
.+..- +|.|.+.........+....++. .-.+. +.. ..+..|. ++..+ +.+++.. ..+.+..+|++++..
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~--~~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRI--LAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEE--EEC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEE--EEE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 23332 57777755321133444443332 21111 111 1233454 44444 5566653 456899999988665
Q ss_pred EEE
Q 045735 337 RDL 339 (378)
Q Consensus 337 ~~v 339 (378)
+.+
T Consensus 202 ~~~ 204 (267)
T 1npe_A 202 RKV 204 (267)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 126
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=49.76 E-value=1.3e+02 Score=26.04 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=53.4
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
.|..+|+.+.+.. .+..... .. ..+. .-+|++.+... ....+.||-+.... ....+........-+.+.++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~--~v-~~l~~spd~~~l~s~s--~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAM--PI-RSLTFSPDSQLLVTAS--DDGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSS--CC-CEEEECTTSCEEEEEC--TTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTT
T ss_pred eEEEEECCCCcEEEEEcccCC--ce-eEEEEcCCCCEEEEEc--CCCeEEEEECCCcc--eeEEEcCCCCceEEEEECCC
Confidence 6888999876543 2332111 11 1121 22566554443 57789999877622 22333322222233455567
Q ss_pred CeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 315 GEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 315 g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
+..++. ..++.+.+||+++++...
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 776665 557789999999987543
No 127
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=49.41 E-value=1.3e+02 Score=27.65 Aligned_cols=111 Identities=10% Similarity=0.242 Sum_probs=61.5
Q ss_pred CCceEEC-----ceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCC-CCEEEEEEE
Q 045735 216 IDSTYWN-----GVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEI-KKCYQLWVL 288 (378)
Q Consensus 216 ~~~v~~~-----G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~-~~~~~IW~L 288 (378)
+.++.++ |.+||.... . .|..+|+.+.+...+..+.. ....+. ..+|.|.+...... ...-.++..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~---~I~~id~~~g~v~~~~~~~~---~P~giavd~dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-D---AFRHVDFVNQYVDIKTTNIG---QCADVNFTLNGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-S---CEEEEETTTTEEEEECCCCS---CEEEEEECTTCCEEEEECCSCTTSEEEEEEC
T ss_pred CceEEEccccCCCEEEEEeCC-C---CEEEEECCCCEEEEeecCCC---CccEEEECCCCCEEEEcCCCCcccceEEEEE
Confidence 3677777 899998765 2 79999998888776643111 111222 33677665443211 123233333
Q ss_pred cCCeeEEEEEEcCCCcceec--eEEEE-CCeEEEEe-eCCEEEEEeCCCCeE
Q 045735 289 KERCWIKQFTIGPFIEAYNP--LGLWK-NGEIFLES-SDGQLLLYDPNAQEM 336 (378)
Q Consensus 289 ~~~~W~~~~~i~~~~~~~~~--~~~~~-~g~ill~~-~~~~~~~yd~~t~~~ 336 (378)
.+..+.....+. .+..| +++.. +|.+++.. ..+.+..||+++++.
T Consensus 214 ~~~~~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 214 RASGFTERLSLC---NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp GGGTTCCEEEEE---ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred CCCCeecccccc---ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 333332111222 12333 44555 67777764 456799999987776
No 128
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=49.28 E-value=1.4e+02 Score=26.36 Aligned_cols=64 Identities=13% Similarity=0.021 Sum_probs=39.2
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC-eEEEE-eeCCEEEEEeCCCCe
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG-EIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g-~ill~-~~~~~~~~yd~~t~~ 335 (378)
+|.+.+... ....+.||-++.. ..+..+........-+.+.+++ .+++. ..++.+.+||+++.+
T Consensus 274 ~~~~l~s~~--~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSSG--RDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEE--SSSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEEe--CCCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 566655554 5678999977652 2334443332223335555566 56665 557889999998865
No 129
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=49.18 E-value=1.9e+02 Score=28.01 Aligned_cols=209 Identities=10% Similarity=-0.005 Sum_probs=0.0
Q ss_pred cccceEEEEeC-----------------------------------CceEEEEeccccceecCCCCcCCCCCCcccccce
Q 045735 111 PYEGIFCLMNG-----------------------------------NKYISLWNLATQELRRLPKCRASLPPHTTIHNSS 155 (378)
Q Consensus 111 s~~GLll~~~~-----------------------------------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~ 155 (378)
|-+|-.++... ..+ +++|..+++...+.... ......
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l-~~~d~~~~~~~~~~~~~-------~~~~~~ 260 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV-GIYHLATGKTVYLQTGE-------PKEKFL 260 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE-EEEETTTTEEEECCCCS-------CTTCEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE-EEEECCCCceEeeccCC-------CCceeE
Q ss_pred eEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCC-CcccccCCCCCCCccccCCCceEE--CceEEEEeeec
Q 045735 156 AGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTD-SWRGFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREE 232 (378)
Q Consensus 156 ~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~-~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~ 232 (378)
..+.+.|..+ .++......... ...+.+++..++ ..+.+......--..........- +|.+.+....+
T Consensus 261 ~~~~~spdg~--~l~~~~~~~~~~------~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 261 TNLSWSPDEN--ILYVAEVNRAQN------ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp EEEEECTTSS--EEEEEEECTTSC------EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred eeEEEECCCC--EEEEEEeCCCCC------eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC
Q ss_pred CCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceE
Q 045735 233 GENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLG 310 (378)
Q Consensus 233 ~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~ 310 (378)
+. ..|..+|..+.....+............+..-++.|.+...........||.++- .....+. ...-...+.
T Consensus 333 g~-~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~----~~~~~~~~~ 407 (706)
T 2z3z_A 333 GW-NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT----PESGMHRTQ 407 (706)
T ss_dssp SS-CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC----CSSSEEEEE
T ss_pred Cc-cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc----CCCceEEEE
Q ss_pred EEECCeEEEEeeC-----CEEEEEeCCCCeEEEEE
Q 045735 311 LWKNGEIFLESSD-----GQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 311 ~~~~g~ill~~~~-----~~~~~yd~~t~~~~~v~ 340 (378)
+..+|+.++.... ..++.+|+++++.+.+.
T Consensus 408 ~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~ 442 (706)
T 2z3z_A 408 LSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLE 442 (706)
T ss_dssp ECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEE
T ss_pred ECCCCCEEEEEecCCCCCcEEEEEECCCCeEeecc
No 130
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=48.90 E-value=1.2e+02 Score=25.93 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=42.8
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEECCe-EEEE-eeCCEEEEEeC-CCCeEEEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWKNGE-IFLE-SSDGQLLLYDP-NAQEMRDLGL 341 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~g~-ill~-~~~~~~~~yd~-~t~~~~~v~~ 341 (378)
+|.+.+... ....+.||-++. ..-.....+.....-..-+.+.+++. .++. ..++.+.+||+ ++++...+..
T Consensus 22 ~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 22 SKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp GGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred CCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 455555444 567999999987 31112222222222233345566777 5555 55788999999 9888765543
No 131
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.74 E-value=1.1e+02 Score=30.52 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=56.3
Q ss_pred CceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE--ECCeEEEEEecCCCCEEEEEEEcCC
Q 045735 217 DSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKER 291 (378)
Q Consensus 217 ~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~~ 291 (378)
.++.+ +|.|||...... ..|..+++....-..+... .. .....|.. .+++|++... ....|.+.-++..
T Consensus 499 ~giavDp~~g~ly~td~~~~--~~I~~~~~dG~~~~~l~~~-~l-~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTP--AKIKKGGLNGVDIYSLVTE-NI-QWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGG 572 (699)
T ss_dssp CCEECCSSSSCCEECCCSSS--CCEEBCCSSSCCCCEESCS-SC-SSCCCEEECTTTCCEEEEET--TTTEEEEECSSSS
T ss_pred ceEEEccCCCcEEEcccCCC--CeEEEEeCCCCCeeEEEeC-CC-CCccEEEEeccCCEEEEEec--CCCeEEEEccCCC
Confidence 45555 589999875431 1688888765433322110 00 01112333 2567776553 3444433333221
Q ss_pred eeEEEEEEcCCCcceeceEEEE-CCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 292 CWIKQFTIGPFIEAYNPLGLWK-NGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 292 ~W~~~~~i~~~~~~~~~~~~~~-~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
. .+. .+.....+..|.++.- .+.+|+.. ..+.|..+|..+++..++
T Consensus 573 ~-~~~-~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 573 N-RKT-ILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp C-CEE-ECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEEC
T ss_pred c-eEE-EEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEE
Confidence 1 111 1111122445655443 34555553 456799999988765443
No 132
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=48.03 E-value=1.4e+02 Score=25.94 Aligned_cols=96 Identities=10% Similarity=0.040 Sum_probs=52.5
Q ss_pred EEEEEECCCcee-eeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEE
Q 045735 237 VIISFDLSDEVI-QEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLW 312 (378)
Q Consensus 237 ~il~fD~~~e~~-~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~ 312 (378)
.|..+|..+.+. ..++.... .. ..+. .-+|++.+... ....+.||-+.. ........+........-+.+.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~--~v-~~~~~s~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSS--WV-MTCAYAPSGNYVACGG--LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSS--CE-EEEEECTTSSEEEEEE--TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEE
T ss_pred cEEEEECCCCCcceEeecCCc--cE-EEEEECCCCCEEEEEe--CCCeEEEEECccCCCcceeEEEecCCCccEEEEEEC
Confidence 788888866543 23332211 10 1111 12555544444 567899998876 2233333333222222333445
Q ss_pred ECCeEEEEeeCCEEEEEeCCCCeEE
Q 045735 313 KNGEIFLESSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 313 ~~g~ill~~~~~~~~~yd~~t~~~~ 337 (378)
+++.++....++.+.+||+++++..
T Consensus 153 ~~~~l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 153 DDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCcEEEEECCCcEEEEECCCCcEE
Confidence 5777665677888999999988754
No 133
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=47.88 E-value=85 Score=26.62 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=56.4
Q ss_pred CceEEEE-------eeecCCccEEEEEECCCceeeeeCCCCCCC--CCcccEEE-EC-CeEEEEEecCCCCEEEEEEEcC
Q 045735 222 NGVCYWL-------AREEGENHVIISFDLSDEVIQEIESPCTPE--LTHGPLGL-YD-NSLSLIALDEIKKCYQLWVLKE 290 (378)
Q Consensus 222 ~G~lywl-------~~~~~~~~~il~fD~~~e~~~~i~~P~~~~--~~~~~l~~-~~-g~L~~~~~~~~~~~~~IW~L~~ 290 (378)
+|.+|+. ..... .|..+|+.++++..+..|.... .....+.. -+ |+|.+... ...+.+|-.+
T Consensus 28 ~g~l~~~~~~~~~~~~~~~---~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~l~~~d~~- 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAG---EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---RLGLLVVQTD- 100 (314)
T ss_dssp TSCEEEEETTCEETTEECC---EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---TTEEEEEETT-
T ss_pred CCCEEEEEeccccCCCCCC---EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---CCCEEEEeCC-
Confidence 6888887 33332 7999999888887765532111 11122222 24 77766543 2244444333
Q ss_pred CeeEEE-EEEcCCCcceec--eEEEECCeEEEEeeC----------------CEEEEEeCCCCeEEEE
Q 045735 291 RCWIKQ-FTIGPFIEAYNP--LGLWKNGEIFLESSD----------------GQLLLYDPNAQEMRDL 339 (378)
Q Consensus 291 ~~W~~~-~~i~~~~~~~~~--~~~~~~g~ill~~~~----------------~~~~~yd~~t~~~~~v 339 (378)
...... ...........| +.+.++|.+++.... ..++.||.+ ++.+.+
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 332211 110001111223 444557888876532 479999987 555543
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=47.58 E-value=1.6e+02 Score=26.60 Aligned_cols=183 Identities=13% Similarity=0.118 Sum_probs=92.0
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccc
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGF 202 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 202 (378)
.+ +++|..|++.+.+.... .....+.+.|.. .+ ++... ..+ ....+.+++..++..+.+
T Consensus 204 ~i-~~~d~~tg~~~~l~~~~----------~~~~~~~~spdg-~~-la~~~---~~~-----g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 204 AL-VIQTLANGAVRQVASFP----------RHNGAPAFSPDG-SK-LAFAL---SKT-----GSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp EE-EEEETTTCCEEEEECCS----------SCEEEEEECTTS-SE-EEEEE---CTT-----SSCEEEEEETTTCCEEEC
T ss_pred EE-EEEECCCCcEEEeecCC----------CcccCEEEcCCC-CE-EEEEE---ecC-----CCceEEEEECCCCCEEeC
Confidence 56 99999998877653322 122355666643 22 22221 111 245678888888766544
Q ss_pred cCCCCCCCccccCCCceEE--Cce-EEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEE-ec
Q 045735 203 RGFKLGRDYVCGRIDSTYW--NGV-CYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIA-LD 277 (378)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~-~~ 277 (378)
.... ... ..+.+ +|. ++.....+. ...|..+|+.+.+...+..... ....+. .-+|+..++. ..
T Consensus 263 ~~~~---~~~----~~~~~spdg~~l~~~s~~~g-~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 263 TDGR---SNN----TEPTWFPDSQNLAFTSDQAG-RPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CCCS---SCE----EEEEECTTSSEEEEEECTTS-SCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEEEEC
T ss_pred cCCC---Ccc----cceEECCCCCEEEEEECCCC-CcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEEECc
Confidence 3211 000 11222 565 444432221 1378889998876554432211 111111 2366654443 32
Q ss_pred CCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCC---EEEEEeCCCCeEEEEEE
Q 045735 278 EIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDG---QLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 278 ~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~---~~~~yd~~t~~~~~v~~ 341 (378)
.....+.+|-++..... .+.... ....+.+.++|..++. ..+. .++.+|++++..+.+..
T Consensus 332 ~g~~~i~~~d~~~~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQ---VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp SSCEEEEEEETTTCCEE---ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred CCceEEEEEECCCCCEE---EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 22346666666553332 222222 2223445567775544 3333 79999999988877754
No 135
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=47.57 E-value=1.4e+02 Score=25.84 Aligned_cols=67 Identities=10% Similarity=0.131 Sum_probs=38.6
Q ss_pred CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 269 NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
+.+.+... .+..+.||-+..........+.-...-..-+.+..++.+++. ..++.+.+||+++++..
T Consensus 48 ~~~l~tgs--~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~ 115 (321)
T 3ow8_A 48 SETVVTGS--LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI 115 (321)
T ss_dssp -CEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEc--CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEE
Confidence 44444333 577899998877444444444332222222334446666655 45778999999887643
No 136
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=47.35 E-value=1.3e+02 Score=25.57 Aligned_cols=97 Identities=13% Similarity=0.067 Sum_probs=52.5
Q ss_pred EEEEEECCC-ce--eeeeCCCCCCCCCcccEEEE--CCeEEEEEecCCCCEEEEEEEcCC--e--eEEEEEEcCCCc---
Q 045735 237 VIISFDLSD-EV--IQEIESPCTPELTHGPLGLY--DNSLSLIALDEIKKCYQLWVLKER--C--WIKQFTIGPFIE--- 304 (378)
Q Consensus 237 ~il~fD~~~-e~--~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~L~~~--~--W~~~~~i~~~~~--- 304 (378)
.|..+|+.+ .. ......+..... ..+... +|++.+... ....+.||.++.. . ......+.....
T Consensus 171 ~i~i~d~~~~~~~~~~~~~~~~~~~i--~~i~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 171 QVQWFRLPLCEDDNGTIEESGLKYQI--RDVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp EEEEEESSCCTTCCCEEEECSCSSCE--EEEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred eEEEEECCccccccceeeecCCCCce--eEEEECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 899999987 32 333332222111 122222 466655554 5779999988652 0 122222322211
Q ss_pred ------ceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 305 ------AYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 305 ------~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
...-+.+.+++.+++. ..++.+.+||+++++..
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 1223444557776665 55778999999988753
No 137
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=47.30 E-value=1.6e+02 Score=26.44 Aligned_cols=86 Identities=17% Similarity=0.198 Sum_probs=50.0
Q ss_pred eeeCCCCCCCCCcccEEEE--CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCE
Q 045735 249 QEIESPCTPELTHGPLGLY--DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQ 325 (378)
Q Consensus 249 ~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~ 325 (378)
+.+..|....+.-..++.. ++.|. +.. +..+.||-++.+.-.+...+........-+.+.++|..++. ..++.
T Consensus 95 ~~l~ap~~~~d~y~~~l~wS~~n~lA-vgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 95 RILDAPEIRNDYYLNLVDWSSGNVLA-VAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp EEEECTTCCCCTTCBCEEECTTSEEE-EEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEECCCCcccccceeEEECCCCEEE-EEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 4455666554432333332 34333 232 56899997766544554544333223344556667887766 55788
Q ss_pred EEEEeCCCCeEEE
Q 045735 326 LLLYDPNAQEMRD 338 (378)
Q Consensus 326 ~~~yd~~t~~~~~ 338 (378)
+.+||+++++..+
T Consensus 171 v~iWd~~~~~~~~ 183 (420)
T 4gga_A 171 VQLWDVQQQKRLR 183 (420)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEEcCCCcEEE
Confidence 9999999987543
No 138
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=46.96 E-value=1.7e+02 Score=27.48 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=52.3
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEEEE--CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC-CCcceeceEEEE
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLGLY--DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP-FIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~-~~~~~~~~~~~~ 313 (378)
.|..+|+.+.+.....+..... ...-+.+ +|++.+... ....+.||-++.. ..+..+.. ...-..-+.+.+
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~~~~--~dg~i~iw~~~~~--~~~~~~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRA--KPSYISISPSETYIAAGD--VMGKILLYDLQSR--EVKTSRWAFRTSKINAISWKP 541 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSS--CEEEEEECTTSSEEEEEE--TTSCEEEEETTTT--EEEECCSCCCSSCEEEEEECC
T ss_pred eEEEEECCCccccccccCCccC--ceEEEEECCCCCEEEEcC--CCCeEEEeeCCCC--cceeEeecCCCCceeEEEEcC
Confidence 6888899887664322222211 1111222 666665554 5678999988762 22222221 222223345555
Q ss_pred ----------CCeEEEE-eeCCEEEEEeCCCC
Q 045735 314 ----------NGEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 314 ----------~g~ill~-~~~~~~~~yd~~t~ 334 (378)
++.+++. ..++.+.+||++++
T Consensus 542 ~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 542 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred ccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 7777766 45778999999986
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=46.21 E-value=1.4e+02 Score=25.44 Aligned_cols=108 Identities=8% Similarity=-0.066 Sum_probs=57.8
Q ss_pred ceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEc
Q 045735 223 GVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIG 300 (378)
Q Consensus 223 G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~ 300 (378)
+.+|.....+. .|..||+.+++.. .+..+.. . ..+. .-+|+..++.. .....+.+|-++...- ....+.
T Consensus 10 ~~~~v~~~~~~---~v~~~d~~~~~~~~~~~~~~~---~-~~~~~s~dg~~l~~~~-~~~~~i~~~d~~~~~~-~~~~~~ 80 (331)
T 3u4y_A 10 NFGIVVEQHLR---RISFFSTDTLEILNQITLGYD---F-VDTAITSDCSNVVVTS-DFCQTLVQIETQLEPP-KVVAIQ 80 (331)
T ss_dssp CEEEEEEGGGT---EEEEEETTTCCEEEEEECCCC---E-EEEEECSSSCEEEEEE-STTCEEEEEECSSSSC-EEEEEE
T ss_pred CEEEEEecCCC---eEEEEeCcccceeeeEEccCC---c-ceEEEcCCCCEEEEEe-CCCCeEEEEECCCCce-eEEecc
Confidence 44555554443 8999999887764 3444321 1 2222 22666433333 2355777776655322 122222
Q ss_pred CCCcceeceEEEECCeEEEEeeCC----EEEEEeCCCCeEEEE
Q 045735 301 PFIEAYNPLGLWKNGEIFLESSDG----QLLLYDPNAQEMRDL 339 (378)
Q Consensus 301 ~~~~~~~~~~~~~~g~ill~~~~~----~~~~yd~~t~~~~~v 339 (378)
.......-+.+.++|..++..... .+.+||+++++....
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 222112225566677766664333 899999999876543
No 140
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=45.79 E-value=1.4e+02 Score=25.51 Aligned_cols=55 Identities=13% Similarity=0.264 Sum_probs=34.7
Q ss_pred CCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEEEECC----eEEEE-eeCCEEEEEeCCC
Q 045735 279 IKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGLWKNG----EIFLE-SSDGQLLLYDPNA 333 (378)
Q Consensus 279 ~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~g----~ill~-~~~~~~~~yd~~t 333 (378)
.+..+.||-++. ..|.....+........-+.+.+++ .+++. ..++.+.+||+++
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 577899999976 6677666554333222333444443 44544 5678899999876
No 141
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=45.53 E-value=1.5e+02 Score=27.80 Aligned_cols=63 Identities=8% Similarity=0.070 Sum_probs=37.3
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCC
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~ 334 (378)
+|++.+... ....+.||-++... .....+.....-..-+.+..++. ++. ..++.+.+||++++
T Consensus 552 ~~~~l~~~~--~dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 552 EEDLVATGS--LDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCCEEEEEE--TTSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred CCCEEEEEc--CCCcEEEEECCCCc-eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 566665554 56799999988621 12222322222233456667888 554 55778999998763
No 142
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=44.11 E-value=1.7e+02 Score=25.96 Aligned_cols=192 Identities=11% Similarity=0.121 Sum_probs=89.9
Q ss_pred cccceEEEE-eCC-ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccccee
Q 045735 111 PYEGIFCLM-NGN-KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSH 188 (378)
Q Consensus 111 s~~GLll~~-~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (378)
+.+|-.++. ..+ .+ .|||..+++....-... ......+.+.|..+ + ++.. .. ...
T Consensus 132 s~dg~~l~s~~~d~~i-~iwd~~~~~~~~~~~~h---------~~~v~~~~~~p~~~-~-l~s~----s~-------d~~ 188 (393)
T 1erj_A 132 SPDGKFLATGAEDRLI-RIWDIENRKIVMILQGH---------EQDIYSLDYFPSGD-K-LVSG----SG-------DRT 188 (393)
T ss_dssp CTTSSEEEEEETTSCE-EEEETTTTEEEEEECCC---------SSCEEEEEECTTSS-E-EEEE----ET-------TSE
T ss_pred CCCCCEEEEEcCCCeE-EEEECCCCcEEEEEccC---------CCCEEEEEEcCCCC-E-EEEe----cC-------CCc
Confidence 445544443 333 55 99999888765321111 12234566666432 2 2221 11 346
Q ss_pred EEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceee-eeCCCCCC---CCCc
Q 045735 189 IAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTP---ELTH 261 (378)
Q Consensus 189 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~---~~~~ 261 (378)
+.+|+.+++.-...-.. .-.. ..+.+ +|.+......+. .|..+|+.+.+.. .+..+... ....
T Consensus 189 v~iwd~~~~~~~~~~~~--~~~v-----~~~~~~~~~~~~l~~~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLSI--EDGV-----TTVAVSPGDGKYIAAGSLDR---AVRVWDSETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp EEEEETTTTEEEEEEEC--SSCE-----EEEEECSTTCCEEEEEETTS---CEEEEETTTCCEEEEEC------CCCSSC
T ss_pred EEEEECCCCeeEEEEEc--CCCc-----EEEEEECCCCCEEEEEcCCC---cEEEEECCCCcEEEeecccccCCCCCCCC
Confidence 77888876643221110 0000 11222 454444333333 6888999876543 33322211 1111
Q ss_pred -ccEE-EECCeEEEEEecCCCCEEEEEEEcC-Ce---------eEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEE
Q 045735 262 -GPLG-LYDNSLSLIALDEIKKCYQLWVLKE-RC---------WIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLL 328 (378)
Q Consensus 262 -~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~-~~---------W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~ 328 (378)
..+. .-+|++.+... ....+.||-+.. .. ......+........-+.+..++..++. ..++.+.+
T Consensus 259 v~~v~~~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~i 336 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGS--LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF 336 (393)
T ss_dssp EEEEEECTTSSEEEEEE--TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEE
T ss_pred EEEEEECCCCCEEEEEe--CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 1121 12566555444 578999998865 10 1111111111112222444456776665 55788999
Q ss_pred EeCCCCeEE
Q 045735 329 YDPNAQEMR 337 (378)
Q Consensus 329 yd~~t~~~~ 337 (378)
||.++++..
T Consensus 337 wd~~~~~~~ 345 (393)
T 1erj_A 337 WDKKSGNPL 345 (393)
T ss_dssp EETTTCCEE
T ss_pred EECCCCeEE
Confidence 999998743
No 143
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=43.49 E-value=1.7e+02 Score=25.60 Aligned_cols=112 Identities=12% Similarity=0.029 Sum_probs=55.7
Q ss_pred CceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE--ECCeEEEEEecCCCCEEEEEEEcC-
Q 045735 217 DSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKE- 290 (378)
Q Consensus 217 ~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~- 290 (378)
.++.+ +|.+||...... .|..+|+....-..+.. ... .....+.. .+|.|...... . .-.|++++-
T Consensus 82 ~glavd~~~g~ly~~d~~~~---~I~~~~~dG~~~~~l~~-~~~-~~P~giavdp~~g~ly~td~~-~--~~~I~r~~~d 153 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETN---RIEVSNLDGSLRKVLFW-QEL-DQPRAIALDPSSGFMYWTDWG-E--VPKIERAGMD 153 (318)
T ss_dssp CEEEEETTTTEEEEEETTTT---EEEEEETTSCSCEEEEC-SSC-SSEEEEEEEGGGTEEEEEECS-S--SCEEEEEETT
T ss_pred cEEEEEcCCCeEEEEECCCC---EEEEEECCCCcEEEEEe-CCC-CCccEEEEeCCCCEEEEEecC-C--CCEEEEEEcC
Confidence 44444 689999876554 89999997654333311 111 11122333 25676664421 1 234555543
Q ss_pred CeeEEEEEEcCCCcceeceE--EEE-CCeEEEEe-eCCEEEEEeCCCCeEEEE
Q 045735 291 RCWIKQFTIGPFIEAYNPLG--LWK-NGEIFLES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 291 ~~W~~~~~i~~~~~~~~~~~--~~~-~g~ill~~-~~~~~~~yd~~t~~~~~v 339 (378)
++-.+.. +. ..+..|.+ +.. ++.+++.. ..+.+..+|++.+..+.+
T Consensus 154 G~~~~~~-~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 154 GSSRFII-IN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp SCSCEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCeEEE-EE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 2211111 11 12444544 333 45666653 356788888776554443
No 144
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=42.72 E-value=1.8e+02 Score=25.72 Aligned_cols=207 Identities=11% Similarity=0.069 Sum_probs=102.1
Q ss_pred ecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccce
Q 045735 110 GPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFS 187 (378)
Q Consensus 110 ~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (378)
+..+|.|...+. ..+ ..+++.++....+..... ....++.+|+..+. +.... . ...
T Consensus 81 d~~~~~ly~~D~~~~~I-~r~~~~g~~~~~~~~~~~---------~~p~glavd~~~g~--ly~~d----~------~~~ 138 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRI-LRANLNGSNVEEVVSTGL---------ESPGGLAVDWVHDK--LYWTD----S------GTS 138 (349)
T ss_dssp ETTTTEEEEEETTTTEE-EEEETTSCSCEEEECSSC---------SCCCEEEEETTTTE--EEEEE----T------TTT
T ss_pred eccccEEEEEeccCCce-EEEecCCCCceEEEeCCC---------CCccEEEEecCCCe--EEEEc----C------CCC
Confidence 456777777763 355 888888766444322211 12246777765442 22221 1 134
Q ss_pred eEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccE
Q 045735 188 HIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPL 264 (378)
Q Consensus 188 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l 264 (378)
.+++++..+..-+.+... . ...+.++.+ +|.+||....... .|..+|+....-..+- ..... ....|
T Consensus 139 ~I~~~~~dG~~~~~l~~~--~----l~~P~~iavdp~~g~ly~td~~~~~--~I~r~~~dG~~~~~~~-~~~~~-~PnGl 208 (349)
T 3v64_C 139 RIEVANLDGAHRKVLLWQ--S----LEKPRAIALHPMEGTIYWTDWGNTP--RIEASSMDGSGRRIIA-DTHLF-WPNGL 208 (349)
T ss_dssp EEEEEETTSCSCEEEECT--T----CSCEEEEEEETTTTEEEEEECSSSC--EEEEEETTSCSCEESC-CSSCS-CEEEE
T ss_pred eEEEEcCCCCceEEEEeC--C----CCCcceEEEecCcCeEEEeccCCCC--EEEEEeCCCCCcEEEE-ECCCC-CcceE
Confidence 677777765432222110 1 112244444 5899999866522 8999998765433321 11111 11233
Q ss_pred EE--ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEE-ECCeEEEEe-eCCEEEEEeCCCC-eEEEE
Q 045735 265 GL--YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLW-KNGEIFLES-SDGQLLLYDPNAQ-EMRDL 339 (378)
Q Consensus 265 ~~--~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~-~~g~ill~~-~~~~~~~yd~~t~-~~~~v 339 (378)
.. .+|+|.+... ....|...-++. .-.+.. +. ..+..|.++. .++.+++.. ..+.+..+|..++ ..+.+
T Consensus 209 a~d~~~~~lY~aD~--~~~~I~~~~~dG-~~~~~~-~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 209 TIDYAGRRMYWVDA--KHHVIERANLDG-SHRKAV-IS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EEETTTTEEEEEET--TTTEEEEEETTS-CSCEEE-EC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEeCCCCEEEEEEC--CCCEEEEEeCCC-CceEEE-Ee--CCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 33 3677777654 344444433332 111111 11 1244565544 356666664 4668999995554 44444
Q ss_pred EEecee-EEEEEeeec
Q 045735 340 GLRGLW-FYVHCFRES 354 (378)
Q Consensus 340 ~~~~~~-~~~~~y~~s 354 (378)
...... ..+..|-++
T Consensus 283 ~~~~~~p~gi~v~~~~ 298 (349)
T 3v64_C 283 RNKLHFPMDIHTLHPQ 298 (349)
T ss_dssp ECSCSCCCCEEEECGG
T ss_pred ccCCCCCceEEEEccc
Confidence 322111 344455444
No 145
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=42.39 E-value=90 Score=26.86 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=51.6
Q ss_pred EEEEEECCCceeeee-CCCCCCCCCcccEEEE----CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEE
Q 045735 237 VIISFDLSDEVIQEI-ESPCTPELTHGPLGLY----DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGL 311 (378)
Q Consensus 237 ~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~----~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~ 311 (378)
.|..+|+.++....+ .+..+.. ...-+.+ +|.+.+... .+..+.||-+....|.....+........-+.+
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~--~V~~v~~~~~~~~~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~ 111 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEG--PVWQVAWAHPMYGNILASCS--YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW 111 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSS--CEEEEEECCGGGSSCEEEEE--TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEE
T ss_pred eEEEEEecCCCcEEEEEEcCCCc--cEEEEEeCCCCCCCEEEEEE--CCCEEEEEECCCCcceEEEEccCCCCceEEEEE
Confidence 778888876543222 1222111 1111222 255544444 567899998876667776665433322233444
Q ss_pred EEC--CeEEEE-eeCCEEEEEeCCCC
Q 045735 312 WKN--GEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 312 ~~~--g~ill~-~~~~~~~~yd~~t~ 334 (378)
.++ |.++.. ..++.+.+||++++
T Consensus 112 ~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 112 APHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 444 555555 45677999998875
No 146
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=41.20 E-value=1.8e+02 Score=25.39 Aligned_cols=95 Identities=12% Similarity=0.055 Sum_probs=51.9
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
.|..+|+.+.+.. .++..... ..+. .-+|+..++.. .....+.+|-++..+-. ..+.... ...-+.+.++
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~~----~~~~~s~dg~~l~~~~-~~d~~i~v~d~~~~~~~--~~~~~~~-~v~~~~~spd 84 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSNP----MGAVISPDGTKVYVAN-AHSNDVSIIDTATNNVI--ATVPAGS-SPQGVAVSPD 84 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSE----EEEEECTTSSEEEEEE-GGGTEEEEEETTTTEEE--EEEECSS-SEEEEEECTT
T ss_pred EEEEEECCCCeEEEEeecCCCc----ceEEECCCCCEEEEEC-CCCCeEEEEECCCCeEE--EEEECCC-CccceEECCC
Confidence 7999999876553 33322111 1121 22565443332 24578999987663322 2232222 1223445556
Q ss_pred CeEEE-Ee-eCCEEEEEeCCCCeEEEE
Q 045735 315 GEIFL-ES-SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 315 g~ill-~~-~~~~~~~yd~~t~~~~~v 339 (378)
|..++ .. .++.+.+||+++++....
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGT 111 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEE
Confidence 76544 43 357899999999876544
No 147
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=41.20 E-value=1.2e+02 Score=26.19 Aligned_cols=70 Identities=9% Similarity=0.070 Sum_probs=40.0
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
+|++.+... ....+.||-+.+ ..+.....+........-+.+.+++.+++. ..++.+.+||..++.++.+
T Consensus 118 ~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 118 DGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp TSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 344433333 567889998854 456555555433322233444556766665 4466788888877654443
No 148
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=41.16 E-value=1.9e+02 Score=25.54 Aligned_cols=96 Identities=11% Similarity=0.138 Sum_probs=51.2
Q ss_pred EEEEEECCCc--eeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCC-----cceec
Q 045735 237 VIISFDLSDE--VIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFI-----EAYNP 308 (378)
Q Consensus 237 ~il~fD~~~e--~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~-----~~~~~ 308 (378)
.|..+|+... ....+.. ..... ..+. .-+|+..+... .+..+.||-+....-...+...+.. ....-
T Consensus 229 ~v~~wd~~~~~~~~~~~~~--h~~~v-~~v~~~p~~~~l~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRTYHG--HEGDI-NSVKFFPDGQRFGTGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp CEEEEETTTTCCCCEEECC--CSSCC-CEEEECTTSSEEEEEC--SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred eEEEEECCCCCcceEEECC--cCCCe-EEEEEecCCCeEEEEc--CCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 6888998632 2222221 11111 1122 12566554443 6788999988763222222211111 01233
Q ss_pred eEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 309 LGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 309 ~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
+++..+|.+++. ..++.+.+||..+++..
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 556668887776 45778999999887643
No 149
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=41.07 E-value=1.8e+02 Score=25.18 Aligned_cols=66 Identities=14% Similarity=0.083 Sum_probs=38.7
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEM 336 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~ 336 (378)
+|.+.+... ....+.||-+....-...... .......-+.+.++|.++.. ..++.+.+||+++++.
T Consensus 138 ~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~-~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWAD--NRGTIGFQSYEDDSQYIVHSA-KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEE--TTCCEEEEESSSSCEEEEECC-CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCCEEEEEe--CCCcEEEEECCCCcEEEEEec-CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 455555444 577899998877222222111 11111233455567887776 5678899999998764
No 150
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=41.00 E-value=1.8e+02 Score=25.22 Aligned_cols=140 Identities=11% Similarity=0.036 Sum_probs=74.1
Q ss_pred ceeEEEEEcCCCCcccccCC-CCCCCccccCCC-ceEECceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcc
Q 045735 186 FSHIAVYNLSTDSWRGFRGF-KLGRDYVCGRID-STYWNGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHG 262 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~-~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~ 262 (378)
...+.+|+..++.....-.. ....+.. .... .+..++.+|....... .|..+|..+.+. ..++. . ....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg-~~~~~i~~~~~~lyv~~~~~~---~v~viD~~t~~~~~~i~~--~--~~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLG-DVAQSMVIRDGIGWIVVNNSH---VIFAIDINTFKEVGRITG--F--TSPR 87 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCB-SCEEEEEEETTEEEEEEGGGT---EEEEEETTTCCEEEEEEC--C--SSEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccC-ccceEEEEECCEEEEEEcCCC---EEEEEECcccEEEEEcCC--C--CCCc
Confidence 56778888888765431100 0000110 0112 2344667777766543 899999998766 44531 1 1112
Q ss_pred cEEE-ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCC---cceec--eEEEECCeEEEEe--eCCEEEEEeCCCC
Q 045735 263 PLGL-YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFI---EAYNP--LGLWKNGEIFLES--SDGQLLLYDPNAQ 334 (378)
Q Consensus 263 ~l~~-~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~---~~~~~--~~~~~~g~ill~~--~~~~~~~yd~~t~ 334 (378)
.+.. -+|+|.+... ....+.+|-++.. ....++.... ....| +.+ .++.+++.. .++.+..+|++|+
T Consensus 88 ~i~~~~~g~lyv~~~--~~~~v~~iD~~t~--~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQI--WDYRIFIINPKTY--EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEEEETTEEEEEEB--SCSEEEEEETTTT--EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT
T ss_pred EEEEeCCCeEEEEEC--CCCeEEEEECCCC--eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC
Confidence 3443 5787766543 3456655544332 2222333211 01122 333 577777765 2678999999998
Q ss_pred eEEE
Q 045735 335 EMRD 338 (378)
Q Consensus 335 ~~~~ 338 (378)
++..
T Consensus 163 ~~~~ 166 (328)
T 3dsm_A 163 KVVD 166 (328)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8654
No 151
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=40.31 E-value=1.9e+02 Score=25.34 Aligned_cols=195 Identities=12% Similarity=0.000 Sum_probs=83.6
Q ss_pred cccceEEEEeCC-ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeE
Q 045735 111 PYEGIFCLMNGN-KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHI 189 (378)
Q Consensus 111 s~~GLll~~~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 189 (378)
+.+|.++....+ .+ .|||..+++........... .......+.+.|.. .+-+ .. .. .-.+
T Consensus 103 s~d~~~l~~s~dg~v-~lWd~~~~~~~~~~~~~~~~-----h~~~V~~v~~spdg-~~l~-sg----s~-------dg~v 163 (357)
T 4g56_B 103 VSEKGILVASDSGAV-ELWEILEKESLLVNKFAKYE-----HDDIVKTLSVFSDG-TQAV-SG----GK-------DFSV 163 (357)
T ss_dssp ETTTEEEEEETTSCE-EEC--------CCCCEEECC-----CSSCEEEEEECSSS-SEEE-EE----ET-------TSCE
T ss_pred cCCCCEEEEECCCEE-EEeeccccceeEEEeeccCC-----CCCCEEEEEECCCC-CEEE-EE----eC-------CCeE
Confidence 334555555443 56 99999998765443322110 11223455666543 2222 11 11 3457
Q ss_pred EEEEcCCCCcccc-cCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceeee-eCCCCCCCCCcccEE
Q 045735 190 AVYNLSTDSWRGF-RGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQE-IESPCTPELTHGPLG 265 (378)
Q Consensus 190 ~vyss~~~~W~~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~ 265 (378)
.+|+..++.-... ... -... .++.+ +|.-+.+....+. .|..+|+.+.+... +..... .....-+
T Consensus 164 ~iwd~~~~~~~~~~~~h---~~~v----~~v~~s~~~~~~~~s~~~dg--~v~~wd~~~~~~~~~~~~~~~--~~~v~~v 232 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAH---SSEV----NCVAACPGKDTIFLSCGEDG--RILLWDTRKPKPATRIDFCAS--DTIPTSV 232 (357)
T ss_dssp EEEETTTTEEEEEECCC---SSCE----EEEEECTTCSSCEEEEETTS--CEEECCTTSSSCBCBCCCTTC--CSCEEEE
T ss_pred EEEECCCCcEEEEEcCC---CCCE----EEEEEccCCCceeeeeccCC--ceEEEECCCCceeeeeeeccc--cccccch
Confidence 7888776542211 110 0000 22222 2322222222221 68888987754332 222111 1111112
Q ss_pred EE---CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC-eEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 266 LY---DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG-EIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 266 ~~---~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g-~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
.+ ++.+.+... ....+.||-+.... ....+.....-..-+.+..++ .++.. ..++.+.+||+++++..+.
T Consensus 233 ~~sp~~~~~la~g~--~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 233 TWHPEKDDTFACGD--ETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EECTTSTTEEEEEE--SSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred hhhhcccceEEEee--cccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 22 345544443 56789999876611 112222222112234444454 45544 4577899999999876543
No 152
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=40.30 E-value=1.8e+02 Score=24.96 Aligned_cols=66 Identities=23% Similarity=0.192 Sum_probs=40.3
Q ss_pred eEEEEEecCCCCEEEEEEEcC--Cee-EEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 270 SLSLIALDEIKKCYQLWVLKE--RCW-IKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 270 ~L~~~~~~~~~~~~~IW~L~~--~~W-~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
.+.+... .+..+.+|-+.. ... .....+.-......-+.+..+|..++. ..++.+.+||+++++..
T Consensus 31 ~~l~s~s--~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 31 NLLLSAS--RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TEEEEEE--TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEec--CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee
Confidence 4544444 678999999875 222 223333333222333455567777766 45788999999998753
No 153
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=40.25 E-value=2.1e+02 Score=25.78 Aligned_cols=112 Identities=11% Similarity=0.113 Sum_probs=60.2
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIK 295 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~ 295 (378)
.++..+|........++ .|..+|+.+.+. ..+..+..... ...-...++.+.+... ....+.||-++..+...
T Consensus 323 ~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 323 SGMELKDNILVSGNADS---TVKIWDIKTGQCLQTLQGPNKHQS-AVTCLQFNKNFVITSS--DDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEEETTEEEEEETTS---CEEEEETTTCCEEEEECSTTSCSS-CEEEEEECSSEEEEEE--TTSEEEEEETTTCCEEE
T ss_pred EEEEEeCCEEEEEeCCC---eEEEEECCCCcEEEEEccCCCCCC-CEEEEEECCCEEEEEe--CCCeEEEEECCCCceee
Confidence 34555666444444443 799999976543 44554433222 1222344676655554 57899999887743333
Q ss_pred EEEEc---CCCcceeceEEEECCeEEEEe-eCC----EEEEEeCCCC
Q 045735 296 QFTIG---PFIEAYNPLGLWKNGEIFLES-SDG----QLLLYDPNAQ 334 (378)
Q Consensus 296 ~~~i~---~~~~~~~~~~~~~~g~ill~~-~~~----~~~~yd~~t~ 334 (378)
..... .......-+.+.+++.++... .++ ++.+||++..
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 22111 111122334455566665553 333 4999998764
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=40.05 E-value=1.4e+02 Score=25.17 Aligned_cols=95 Identities=14% Similarity=0.125 Sum_probs=0.0
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCe
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGE 316 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ 316 (378)
.|..+|+.+.+...+.++.........-..-+|+..++. ...+.+|-++..+-.......... .-+.+.++|+
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~----~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~s~dg~ 292 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA----YNVLESFDLEKNASIKRVPLPHSY---YSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE----ESEEEEEETTTTEEEEEEECSSCC---CEEEECTTSC
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe----CCeEEEEECCCCcCcceecCCCce---eeEEECCCCC
Q ss_pred EEEE-eeCCEEEEEeCCCCeEEE
Q 045735 317 IFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 317 ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
.++. ..++.+.+||+++++...
T Consensus 293 ~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 293 TVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEEEESBSSEEEEEETTTCCEEE
T ss_pred EEEEEcCCCcEEEEECcCCcEEE
No 155
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=39.91 E-value=31 Score=25.61 Aligned_cols=42 Identities=12% Similarity=0.074 Sum_probs=29.7
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEE
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLIL 173 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 173 (378)
.+ ++++|.|++|. |.... ......+.+..|+..+.|.|+...
T Consensus 12 ~V-~~~d~~~~~W~--p~~~g------~~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TV-MLYDDGNKRWL--PAGTG------PQAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EC-BEECTTTSSCC--BSSCS------CCCCEEEEEEEETTTTEEEEEEEE
T ss_pred EE-EEEcCCCCcee--ECCCC------CCCccEEEEEEeCCCCEEEEEEEE
Confidence 55 88999999975 43321 012345788889888999998874
No 156
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=39.40 E-value=2e+02 Score=25.36 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=53.0
Q ss_pred EEEEEECCCceeee-eC--CCCCCCCCcccEEE--ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceE
Q 045735 237 VIISFDLSDEVIQE-IE--SPCTPELTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLG 310 (378)
Q Consensus 237 ~il~fD~~~e~~~~-i~--~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~ 310 (378)
.|..+|+.+++... +. .|......-..+.. .++.+.+... .+..+.||-+.. .. ....+........-+.
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs--~D~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS--CDTTVRLWDLRITSR--AVRTYHGHEGDINSVK 256 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE--TTSCEEEEETTTTCC--CCEEECCCSSCCCEEE
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE--CCCeEEEEECCCCCc--ceEEECCcCCCeEEEE
Confidence 78889998765433 22 22222111112221 2566665554 577899998764 11 1112222221223345
Q ss_pred EEECCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 311 LWKNGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 311 ~~~~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
+.++|..++. ..++.+.+||+++++...
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred EecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 5567776665 457789999999876443
No 157
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=39.31 E-value=2.8e+02 Score=27.03 Aligned_cols=143 Identities=12% Similarity=0.033 Sum_probs=72.6
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCccEEEEEECCCce---eeeeCCCCCCCCCccc
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGENHVIISFDLSDEV---IQEIESPCTPELTHGP 263 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~ 263 (378)
..+.+.+..++.|+.+... .... ...+.-+|.+|.....+.....|..+|+.+.. |+.+-.+... ..-..
T Consensus 252 ~~l~~~~~~~~~~~~l~~~---~~~~---~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~l~~ 324 (695)
T 2bkl_A 252 NDVYWKRPGEKDFRLLVKG---VGAK---YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS-ASLLS 324 (695)
T ss_dssp EEEEEECTTCSSCEEEEEC---SSCC---EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS-CEEEE
T ss_pred eEEEEEcCCCCceEEeecC---CCce---EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC-CeEEE
Confidence 3444445555667766431 1111 13344577765554422112589999997654 5554322211 11012
Q ss_pred EEEECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCC-CcceeceEEEECC-eEEEEee----CCEEEEEeCCCCeE
Q 045735 264 LGLYDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPF-IEAYNPLGLWKNG-EIFLESS----DGQLLLYDPNAQEM 336 (378)
Q Consensus 264 l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~-~~~~~~~~~~~~g-~ill~~~----~~~~~~yd~~t~~~ 336 (378)
+...+++|.+... ......||+++- .. ....+... ......+++..++ .+++... ...++.||+++++.
T Consensus 325 ~~~~~~~lv~~~~--~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 325 VSIVGGHLSLEYL--KDATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTEEEEEEE--ETTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEECCEEEEEEE--ECCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3334788776554 456788888873 22 22334321 2111222222344 4544422 35799999999887
Q ss_pred EEEE
Q 045735 337 RDLG 340 (378)
Q Consensus 337 ~~v~ 340 (378)
+.+.
T Consensus 401 ~~l~ 404 (695)
T 2bkl_A 401 ELWA 404 (695)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 158
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=39.25 E-value=2.9e+02 Score=27.20 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=60.5
Q ss_pred CceEEEEeeecCCccEEEEEECCC--ceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSD--EVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFT 298 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~--e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~ 298 (378)
++.+|+....+.....|...|+.+ +.|+.+- |..... -..+...+++|.+... ......||+++- +. ....
T Consensus 327 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~-l~~~~~~~~~lv~~~~--~dg~~~l~~~~~~g~--~~~~ 400 (741)
T 1yr2_A 327 GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDN-LESVGIAGNRLFASYI--HDAKSQVLAFDLDGK--PAGA 400 (741)
T ss_dssp TTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSE-EEEEEEEBTEEEEEEE--ETTEEEEEEEETTSC--EEEE
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCe-EEEEEEECCEEEEEEE--ECCEEEEEEEeCCCC--ceee
Confidence 445676655432225899999987 5676653 333211 1122334777776554 355778888873 32 2233
Q ss_pred EcC-CCcceeceEEEECCe-EEEEe----eCCEEEEEeCCCCeEEEE
Q 045735 299 IGP-FIEAYNPLGLWKNGE-IFLES----SDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 299 i~~-~~~~~~~~~~~~~g~-ill~~----~~~~~~~yd~~t~~~~~v 339 (378)
+.. .......+++..++. +++.. ....++.||+++++.+.+
T Consensus 401 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 401 VSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred ccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 432 121122223333444 55542 235799999999886555
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=39.03 E-value=2.4e+02 Score=26.55 Aligned_cols=109 Identities=11% Similarity=0.007 Sum_probs=58.5
Q ss_pred ceEECce-EEEEeeecCCccEEEEEECCCceeeeeC-CCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC--Cee
Q 045735 218 STYWNGV-CYWLAREEGENHVIISFDLSDEVIQEIE-SPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE--RCW 293 (378)
Q Consensus 218 ~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~--~~W 293 (378)
++..+|. +++.....+ .+..+|+.+++...+. .|. . .....-+|+..++........-.||+++- +.+
T Consensus 116 ~~s~dg~~~~~~s~~~~---~~~l~d~~~g~~~~l~~~~~----~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATED---RVALYALDGGGLRELARLPG----F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp EEEECSSCEEEEEECSS---CEEEEEEETTEEEEEEEESS----C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred eeCCCCCeEEEEecCCC---CceEEEccCCcEEEeecCCC----c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 4555663 444444333 3447788887765553 222 1 12233467665543322233344666663 444
Q ss_pred EEEEEEcCCCcceeceEEEECCeEEEEe-eCC--EEEEEeCCCCeEE
Q 045735 294 IKQFTIGPFIEAYNPLGLWKNGEIFLES-SDG--QLLLYDPNAQEMR 337 (378)
Q Consensus 294 ~~~~~i~~~~~~~~~~~~~~~g~ill~~-~~~--~~~~yd~~t~~~~ 337 (378)
.. +...........+.+||+.+... .++ .++.||+++++.+
T Consensus 188 ~~---l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 188 RV---FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EE---ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred eE---eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 32 32222223445556688876653 344 7999999999877
No 160
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=38.80 E-value=2.9e+02 Score=27.10 Aligned_cols=96 Identities=9% Similarity=0.108 Sum_probs=47.5
Q ss_pred EEEEEECCCc-eeeeeCCCCCCCCCcccEEEE--CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEE
Q 045735 237 VIISFDLSDE-VIQEIESPCTPELTHGPLGLY--DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~e-~~~~i~~P~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~ 313 (378)
.|..+|+.++ ..... +..... .-..+.-. +|.+.+... ....+.+|-+....-...... ....-..-+.+..
T Consensus 120 ~i~vw~~~~~~~~~~~-~~~~~~-~v~~~~~~p~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 120 TVKLWNWENNWALEQT-FEGHEH-FVMCVAFNPKDPSTFASGC--LDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYP 194 (814)
T ss_dssp EEEEEEGGGTSEEEEE-EECCSS-CEEEEEEETTEEEEEEEEE--TTSEEEEEETTCSSCSEEEEC-CCTTCCCEEEECC
T ss_pred EEEEEECCCCceEEEE-EcCCCC-cEEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcceeEEec-CCCCCEEEEEEEE
Confidence 7888998765 33221 111111 10122222 344444444 567899998866211111111 1111122233333
Q ss_pred --CCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 314 --NGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 314 --~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
++..++. ..++.+..||+++++..
T Consensus 195 ~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 195 LPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp STTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 5665555 55778999999988743
No 161
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=38.70 E-value=2.2e+02 Score=25.64 Aligned_cols=182 Identities=11% Similarity=0.060 Sum_probs=89.8
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccc
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGF 202 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 202 (378)
.+ .++|..+++.+.|.... .....+.+.|..+ +++... .. .....+.+++..++.-+.+
T Consensus 160 ~i-~i~d~~g~~~~~l~~~~----------~~v~~~~~Spdg~--~la~~s---~~-----~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 160 EL-RVSDYDGYNQFVVHRSP----------QPLMSPAWSPDGS--KLAYVT---FE-----SGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EE-EEEETTSCSCEEEEEES----------SCEEEEEECTTSS--EEEEEE---CT-----TSSCEEEEEETTTCCEEEE
T ss_pred eE-EEEcCCCCCCEEEeCCC----------CcceeeEEcCCCC--EEEEEE---ec-----CCCcEEEEEECCCCcEEEe
Confidence 56 99998776655543221 1233455566433 222221 11 1246788999988876554
Q ss_pred cCCCCCCCccccCCCceEE--Cce-EEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecC
Q 045735 203 RGFKLGRDYVCGRIDSTYW--NGV-CYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDE 278 (378)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~ 278 (378)
.... ... .++.+ +|. +.+....++ ...|..+|+.+.+...+.... . ....+. .-+|+..++...
T Consensus 219 ~~~~----~~~---~~~~~spdg~~la~~~~~~g-~~~i~~~d~~~~~~~~l~~~~--~-~~~~~~~spdg~~l~~~s~- 286 (415)
T 2hqs_A 219 ASFP----RHN---GAPAFSPDGSKLAFALSKTG-SLNLYVMDLASGQIRQVTDGR--S-NNTEPTWFPDSQNLAFTSD- 286 (415)
T ss_dssp ECCS----SCE---EEEEECTTSSEEEEEECTTS-SCEEEEEETTTCCEEECCCCS--S-CEEEEEECTTSSEEEEEEC-
T ss_pred ecCC----Ccc---cCEEEcCCCCEEEEEEecCC-CceEEEEECCCCCEEeCcCCC--C-cccceEECCCCCEEEEEEC-
Confidence 3211 100 11222 565 444433221 137999999887765443211 1 111111 226765444432
Q ss_pred CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEE-ee---CCEEEEEeCCCCeEEEEE
Q 045735 279 IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SS---DGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 279 ~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~---~~~~~~yd~~t~~~~~v~ 340 (378)
......||.++- .. ...+........-+.+..+|+.++. .. ...++.+|+++++.+.+.
T Consensus 287 ~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp TTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CCCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 234456666654 22 1122222212222344557775544 32 247999999999876653
No 162
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=38.44 E-value=1.5e+02 Score=25.12 Aligned_cols=111 Identities=7% Similarity=-0.001 Sum_probs=53.7
Q ss_pred eEECceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCC--c--ccEEEECCeEEEEEecCCCCEEEEEEEcC-Cee
Q 045735 219 TYWNGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELT--H--GPLGLYDNSLSLIALDEIKKCYQLWVLKE-RCW 293 (378)
Q Consensus 219 v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~--~--~~l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W 293 (378)
+.-||.++....... ..|+.||.+.+....+.+....... . ..-...+|.+.+... ....+..|-.+. ..|
T Consensus 84 ~~~dG~~lv~~~~~~--~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~--~~~~v~~~d~~G~~~w 159 (276)
T 3no2_A 84 ILPDGNALVAWCGHP--STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF--ATSEVREIAPNGQLLN 159 (276)
T ss_dssp ECTTSCEEEEEESTT--EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET--TTTEEEEECTTSCEEE
T ss_pred ECCCCCEEEEecCCC--CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec--CCCEEEEECCCCCEEE
Confidence 344677665544312 2788899866654444433221000 0 011123555544332 344555544332 334
Q ss_pred EEEEEEcCCCcceeceEEEECCeEEEEe-eCCEEEEEeCCCCeEEE
Q 045735 294 IKQFTIGPFIEAYNPLGLWKNGEIFLES-SDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 294 ~~~~~i~~~~~~~~~~~~~~~g~ill~~-~~~~~~~yd~~t~~~~~ 338 (378)
.... ...+ .. .....+|.+++.. ..++++.+|++|+++.+
T Consensus 160 ~~~~--~~~~--~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 160 SVKL--SGTP--FS-SAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp EEEC--SSCC--CE-EEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred EEEC--CCCc--cc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 3322 1111 11 1223477877764 45579999999776543
No 163
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=37.18 E-value=2.9e+02 Score=26.56 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=60.2
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCc--eeeee-CCCCCCC----CCcccEEEECCeEEEEEecCCCCEEEEEEEc
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDE--VIQEI-ESPCTPE----LTHGPLGLYDNSLSLIALDEIKKCYQLWVLK 289 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~----~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~ 289 (378)
.++..+|.+|.....+ .|.++|..++ .|+.- ..|.... .....+...+|++.+... .. .|..|+
T Consensus 63 ~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---dg--~l~AlD 133 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS----RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---DA--SVVALN 133 (582)
T ss_dssp CCEEETTEEEEEETTT----EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---TT--EEEEEE
T ss_pred ccEEECCEEEEEcCCC----CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---CC--EEEEEE
Confidence 6688999999877643 6999999654 56542 2222111 001123345777665432 12 344554
Q ss_pred C----CeeEEEEEEcC-CCcc-eeceEEEE--CC--eEEEEee------CCEEEEEeCCCCeEEEE
Q 045735 290 E----RCWIKQFTIGP-FIEA-YNPLGLWK--NG--EIFLESS------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 290 ~----~~W~~~~~i~~-~~~~-~~~~~~~~--~g--~ill~~~------~~~~~~yd~~t~~~~~v 339 (378)
- ..|.....-.. ...+ ..|+.... +| .|++-.. ++.++.||.+|++....
T Consensus 134 ~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 134 KNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp SSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred CCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 3 45765421100 0112 24444322 13 3433231 56899999999987664
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=37.09 E-value=2.1e+02 Score=24.82 Aligned_cols=94 Identities=11% Similarity=0.035 Sum_probs=52.1
Q ss_pred cEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecC--CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceE
Q 045735 236 HVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDE--IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLG 310 (378)
Q Consensus 236 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~--~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~ 310 (378)
..+..+|..+.++..+... ... ....+. .-+|+..++.... ....+.+|.++. .....+..+.... ..|..
T Consensus 29 i~~~~~d~~~g~~~~~~~~-~~~-~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~ 104 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDA-EVA-NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCY 104 (361)
T ss_dssp EEEEEEETTTCCEEEEEEE-ECS-CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEEE
T ss_pred EEEEEEeCCCCCEEEeecc-cCC-CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcEE
Confidence 4677778888877665432 111 111222 2356644444322 457999999987 5666665554222 23333
Q ss_pred EEECCeEEEE-e-eCCEEEEEeCCC
Q 045735 311 LWKNGEIFLE-S-SDGQLLLYDPNA 333 (378)
Q Consensus 311 ~~~~g~ill~-~-~~~~~~~yd~~t 333 (378)
+.-+|+.++. . .++.+.+|++++
T Consensus 105 ~~~dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 105 LTTNGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp EEECSSEEEEEETTTTEEEEEEBCT
T ss_pred EEECCCEEEEEECCCCEEEEEEeCC
Confidence 2226665444 3 466899999875
No 165
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=37.01 E-value=3.1e+02 Score=26.82 Aligned_cols=112 Identities=7% Similarity=0.099 Sum_probs=57.7
Q ss_pred CceEEEEeeecCCccEEEEEECCCc---eeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC-CeeEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDE---VIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE-RCWIKQF 297 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e---~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~ 297 (378)
++.+|.++..+.....|+..|+.+. .|+.+ .|.... . ..+...++.|.+.... ...-.|++++- ..+.+
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~-~-~~~s~~g~~lv~~~~~--~g~~~l~~~d~~g~~~~-- 363 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQ-V-LTVHSGSGYLFAEYMV--DATARVEQFDYEGKRVR-- 363 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSS-C-EEEEEETTEEEEEEEE--TTEEEEEEECTTSCEEE--
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCC-E-EEEEEECCEEEEEEEE--CCeeEEEEEECCCCeeE--
Confidence 5678877765422258999999874 35543 232221 1 2333446666665442 33334444443 44433
Q ss_pred EEcC-CCcceeceEEEEC-CeEEEEeeC----CEEEEEeCCCCeEEEEE
Q 045735 298 TIGP-FIEAYNPLGLWKN-GEIFLESSD----GQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 298 ~i~~-~~~~~~~~~~~~~-g~ill~~~~----~~~~~yd~~t~~~~~v~ 340 (378)
.+.. .......++...+ +.+++...+ ..++.||+++++.+.+.
T Consensus 364 ~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 2332 1111111222223 445555332 68999999998876664
No 166
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=36.94 E-value=2e+02 Score=24.69 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=37.5
Q ss_pred CCCEEEEEEEcC------CeeEEEEEEcC-CCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEEE
Q 045735 279 IKKCYQLWVLKE------RCWIKQFTIGP-FIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 279 ~~~~~~IW~L~~------~~W~~~~~i~~-~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v~ 340 (378)
....+.||-+.. ..|.....+.. ......-+.+..++.++-...++.+.+||..+++++.+.
T Consensus 219 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEe
Confidence 577899998864 35766655432 221222233333454444466788999999988765543
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=36.76 E-value=2.3e+02 Score=25.32 Aligned_cols=125 Identities=10% Similarity=-0.008 Sum_probs=0.0
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP 301 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~ 301 (378)
+|.+......++ .|..+|+.+.+... .+..........-...+|++.+... ....+.||-++. ......+..
T Consensus 119 ~~~~l~s~s~Dg---~i~vwd~~~~~~~~-~l~~h~~~V~~v~~~~~~~~l~sgs--~D~~i~iwd~~~--~~~~~~~~~ 190 (410)
T 1vyh_C 119 VFSVMVSASEDA---TIKVWDYETGDFER-TLKGHTDSVQDISFDHSGKLLASCS--ADMTIKLWDFQG--FECIRTMHG 190 (410)
T ss_dssp SSSEEEEEESSS---CEEEEETTTCCCCE-EECCCSSCEEEEEECTTSSEEEEEE--TTSCCCEEETTS--SCEEECCCC
T ss_pred CCCEEEEEeCCC---eEEEEECCCCcEEE-EEeccCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCC--CceeEEEcC
Q ss_pred CCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEEEEecee-EEEEEeeec
Q 045735 302 FIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDLGLRGLW-FYVHCFRES 354 (378)
Q Consensus 302 ~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v~~~~~~-~~~~~y~~s 354 (378)
......-+.+.+++..++. ..++.+.+||+++++....-..... .....+.+.
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCC
No 168
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=36.59 E-value=2.2e+02 Score=25.02 Aligned_cols=101 Identities=10% Similarity=0.044 Sum_probs=51.6
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccE-EEECCeEEEEEecCCCC--EEEEEEEcCCeeE--EEEEEcCCCcceeceEE
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPL-GLYDNSLSLIALDEIKK--CYQLWVLKERCWI--KQFTIGPFIEAYNPLGL 311 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l-~~~~g~L~~~~~~~~~~--~~~IW~L~~~~W~--~~~~i~~~~~~~~~~~~ 311 (378)
.+..++..+...............-..+ ..-+|+..+........ .+.+|-+...... +...+.....-..-+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 5667777665544332222111110111 23467766654422333 5666666553222 22333322222233556
Q ss_pred EECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 312 WKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 312 ~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
.++|.++.. ..++.+.+||.++++..
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 678887776 45778999999998743
No 169
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=36.25 E-value=2.7e+02 Score=27.56 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=31.5
Q ss_pred CceEEC---ceEEEEeeecCCccEEEEEECCCceeeee-CCCCCCCCCcccEEEECCeEEEEE
Q 045735 217 DSTYWN---GVCYWLAREEGENHVIISFDLSDEVIQEI-ESPCTPELTHGPLGLYDNSLSLIA 275 (378)
Q Consensus 217 ~~v~~~---G~lywl~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~~~~ 275 (378)
.++.++ |.|||...... .|.+||+....-+.+ ..+... .....|...++.|.+..
T Consensus 543 nGlavd~~~~~LY~aD~~~~---~I~~~d~dG~~~~~~~~~~~~~-~~P~glavd~~~lywtd 601 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLH---SISSIDVNGGNRKTILEDEKRL-AHPFSLAVFEDKVFWTD 601 (699)
T ss_dssp CCEEECTTTCCEEEEETTTT---EEEEECSSSSCCEEECCCSSSC-SSCCCCEEETTEEEEEC
T ss_pred cEEEEeccCCEEEEEecCCC---eEEEEccCCCceEEEEecCCcC-CCceEeEEECCEEEEEe
Confidence 567764 89999886553 899999976444333 222111 11134445566665543
No 170
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=35.89 E-value=1.5e+02 Score=26.57 Aligned_cols=108 Identities=12% Similarity=0.010 Sum_probs=56.0
Q ss_pred ceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEc
Q 045735 223 GVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIG 300 (378)
Q Consensus 223 G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~ 300 (378)
|.+......++ .|..+|+.+.+. ..+..|...... ..+. .-+|++.+... ....+.||-+....- ...+.
T Consensus 182 ~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~--~~~~~ 253 (437)
T 3gre_A 182 KSLLVALTNLS---RVIIFDIRTLERLQIIENSPRHGAV-SSICIDEECCVLILGT--TRGIIDIWDIRFNVL--IRSWS 253 (437)
T ss_dssp CEEEEEEETTS---EEEEEETTTCCEEEEEECCGGGCCE-EEEEECTTSCEEEEEE--TTSCEEEEETTTTEE--EEEEB
T ss_pred CCEEEEEeCCC---eEEEEeCCCCeeeEEEccCCCCCce-EEEEECCCCCEEEEEc--CCCeEEEEEcCCccE--EEEEe
Confidence 54444444433 899999977554 444443221111 1111 12566655554 567899998876322 22222
Q ss_pred CCCcceeceEE------EECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 301 PFIEAYNPLGL------WKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 301 ~~~~~~~~~~~------~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
... -....++ ..++.+++. ..++.+.+||+++++....
T Consensus 254 ~~~-~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 254 FGD-HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp CTT-CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred cCC-CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 111 0111111 124556665 4466799999998875443
No 171
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=35.40 E-value=2e+02 Score=24.24 Aligned_cols=139 Identities=16% Similarity=0.075 Sum_probs=79.2
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEECceEEEEeeecCCccEEEEEECCCce-eeeeCCCCCCCCCcccE
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYWNGVCYWLAREEGENHVIISFDLSDEV-IQEIESPCTPELTHGPL 264 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~l 264 (378)
...+.+++..++.=...-. ++.......-...++.+|-++.... .+..||..+.+ ...++.|.. . ..|
T Consensus 42 ~S~v~~vD~~tgkv~~~~~----l~~~~fgeGi~~~~~~ly~ltw~~~---~v~v~D~~tl~~~~ti~~~~~--G--wgl 110 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAE----VPPPYFGAGIVAWRDRLIQLTWRNH---EGFVYDLATLTPRARFRYPGE--G--WAL 110 (243)
T ss_dssp SCEEEEEETTTCCEEEEEE----CCTTCCEEEEEEETTEEEEEESSSS---EEEEEETTTTEEEEEEECSSC--C--CEE
T ss_pred CceEEEEECCCCCEEEEEe----CCCCcceeEEEEeCCEEEEEEeeCC---EEEEEECCcCcEEEEEeCCCC--c--eEE
Confidence 5678899998875332221 1211111123455789999887665 89999998754 456777642 1 345
Q ss_pred EEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCC--C-cce--eceEEEECCeEEEEe-eCCEEEEEeCCCCeEEE
Q 045735 265 GLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPF--I-EAY--NPLGLWKNGEIFLES-SDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 265 ~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~--~-~~~--~~~~~~~~g~ill~~-~~~~~~~yd~~t~~~~~ 338 (378)
..-+++|.+.. ... .|++++-..=..+.+|... . .+. .-+- +.+|+++... ....+...|++|+++..
T Consensus 111 t~dg~~L~vSd---gs~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 111 TSDDSHLYMSD---GTA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-WVNGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp EECSSCEEEEC---SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred eeCCCEEEEEC---CCC--eEEEEeCCCCeEEEEEEEccCCcccccceeeE-EeCCEEEEEECCCCeEEEEECCCCCEEE
Confidence 44456666632 233 4777776222233333321 1 011 1122 2388887654 46789999999998754
Q ss_pred -EEE
Q 045735 339 -LGL 341 (378)
Q Consensus 339 -v~~ 341 (378)
+..
T Consensus 185 ~idl 188 (243)
T 3mbr_X 185 WIDL 188 (243)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 443
No 172
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=35.18 E-value=2.5e+02 Score=25.20 Aligned_cols=110 Identities=8% Similarity=0.139 Sum_probs=57.7
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC-CeeE
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE-RCWI 294 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~ 294 (378)
.++..+|.+......++ .|..+|+.+.+.. .+.... ....-+..++...+... ....+.+|-+.. ....
T Consensus 177 ~~l~~~~~~l~sg~~dg---~i~vwd~~~~~~~~~~~~h~----~~v~~l~~~~~~l~s~s--~dg~i~vwd~~~~~~~~ 247 (435)
T 1p22_A 177 LCLQYDERVIITGSSDS---TVRVWDVNTGEMLNTLIHHC----EAVLHLRFNNGMMVTCS--KDRSIAVWDMASPTDIT 247 (435)
T ss_dssp EEEECCSSEEEEEETTS---CEEEEESSSCCEEEEECCCC----SCEEEEECCTTEEEEEE--TTSCEEEEECSSSSCCE
T ss_pred EEEEECCCEEEEEcCCC---eEEEEECCCCcEEEEEcCCC----CcEEEEEEcCCEEEEee--CCCcEEEEeCCCCCCce
Confidence 34445666555554443 7889999876543 222111 11222233455444443 577899998877 3333
Q ss_pred EEEEEcCCCcceeceEEEECCeEEE-EeeCCEEEEEeCCCCeEE
Q 045735 295 KQFTIGPFIEAYNPLGLWKNGEIFL-ESSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 295 ~~~~i~~~~~~~~~~~~~~~g~ill-~~~~~~~~~yd~~t~~~~ 337 (378)
....+........-+.+ ++..++ ...++.+.+||+++++..
T Consensus 248 ~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~ 289 (435)
T 1p22_A 248 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFV 289 (435)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred eeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEE
Confidence 22333222211112222 444444 456778999999887643
No 173
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=34.78 E-value=2.6e+02 Score=25.26 Aligned_cols=190 Identities=10% Similarity=0.022 Sum_probs=87.5
Q ss_pred ceEEEEeCCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEE
Q 045735 114 GIFCLMNGNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYN 193 (378)
Q Consensus 114 GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 193 (378)
..|++.....+ ...++.+++...+-+ ......++.+|+..+ +|.... . ....+..++
T Consensus 84 ~~ll~~~~~~I-~~i~l~~~~~~~~~~----------~~~~~~~l~~d~~~~--~lywsD---~-------~~~~I~~~~ 140 (400)
T 3p5b_L 84 AYLFFTNRHEV-RKMTLDRSEYTSLIP----------NLRNVVALDTEVASN--RIYWSD---L-------SQRMICSTQ 140 (400)
T ss_dssp CEEEEEETTEE-EEECTTSCSCEEEEC----------SCSCEEEEEEETTTT--EEEEEE---T-------TTTEEEEEE
T ss_pred ceeEEecccee-EEEccCCcceeEecc----------ccCcceEEeeeeccC--ceEEEe---c-------CCCeEEEEE
Confidence 45666666566 677776665543311 113456788887554 232221 1 123445555
Q ss_pred cCCCC-cccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE--E
Q 045735 194 LSTDS-WRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL--Y 267 (378)
Q Consensus 194 s~~~~-W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~ 267 (378)
..+.. +...... .......+.++.+ +|.+||...... .|..+|+.......+-. ... .....++. .
T Consensus 141 ~~g~~~~~~~~~~---~~~~~~~p~glavD~~~~~lY~~d~~~~---~I~~~~~~g~~~~~l~~-~~~-~~P~~iavdp~ 212 (400)
T 3p5b_L 141 LDRAHGVSSYDTV---ISRDIQAPDGLAVDWIHSNIYWTDSVLG---TVSVADTKGVKRKTLFR-ENG-SKPRAIVVDPV 212 (400)
T ss_dssp C------CCCEEE---ECSSCSCEEEEEEETTTTEEEEEETTTT---EEEEECTTTCSEEEEEE-CSS-CCEEEEEEETT
T ss_pred cccCCCCCcceEE---EeCCCCCcccEEEEecCCceEEEECCCC---eEEEEeCCCCceEEEEe-CCC-CCcceEEEecc
Confidence 54311 1111110 0000111244444 689999976654 79999998765443311 111 01122333 3
Q ss_pred CCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCcceeceEE--E-ECCeEEEEe-eCCEEEEEeCCCCeEEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYNPLGL--W-KNGEIFLES-SDGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~~~~~--~-~~g~ill~~-~~~~~~~yd~~t~~~~~v~ 340 (378)
+|.|...... ... .|++.+- +.-.+.. +. ..+..|.++ . .++.|++.. ....+..+|++....+.+.
T Consensus 213 ~g~ly~td~~-~~~--~I~~~~~dG~~~~~~-~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 213 HGFMYWTDWG-TPA--KIKKGGLNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp TTEEEEEECS-SSC--CEEEEETTSCSCEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEE
T ss_pred cCeEEEEeCC-CCC--EEEEEeCCCCccEEE-EE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEE
Confidence 5777665432 122 3555443 2111111 11 223455443 3 245565553 3457888887776555543
No 174
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=34.73 E-value=2.2e+02 Score=24.51 Aligned_cols=94 Identities=10% Similarity=0.074 Sum_probs=51.4
Q ss_pred EEEEEECCCceeee-eCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCc--ceeceEEE
Q 045735 237 VIISFDLSDEVIQE-IESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIE--AYNPLGLW 312 (378)
Q Consensus 237 ~il~fD~~~e~~~~-i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~--~~~~~~~~ 312 (378)
.|..+|+.+.+... +.... ... ..+. .-+|.+.+... ....+.||-+.... ....+..... -..-+.+.
T Consensus 207 ~v~~wd~~~~~~~~~~~~h~--~~v-~~v~~~p~~~~l~s~s--~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 207 SAKLWDVREGMCRQTFTGHE--SDI-NAICFFPNGNAFATGS--DDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp CEEEEETTTCSEEEEECCCS--SCE-EEEEECTTSSEEEEEE--TTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEEC
T ss_pred cEEEEECCCCeeEEEEcCCc--CCE-EEEEEcCCCCEEEEEc--CCCcEEEEECCCCc--EEEEEccCCcccceEEEEEC
Confidence 68888987764432 22111 100 1111 12566555444 57789999877622 1222222111 12334555
Q ss_pred ECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 313 KNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 313 ~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
++|.+++. ..++.+.+||..+++..
T Consensus 280 ~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 280 KSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEECCCCeEEEEEcccCcEe
Confidence 67887776 55788999999887643
No 175
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=34.58 E-value=8 Score=35.15 Aligned_cols=27 Identities=4% Similarity=-0.065 Sum_probs=16.9
Q ss_pred CceEECceEEEEeeecCCccEEEEEECCCce
Q 045735 217 DSTYWNGVCYWLAREEGENHVIISFDLSDEV 247 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~ 247 (378)
.++..+|.+|.-...+ .|.++|..+++
T Consensus 4 sP~v~~~~v~~gs~dg----~v~a~d~~tG~ 30 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDG----SLHAVSKRTGS 30 (369)
T ss_dssp ----CTTEEEEEETTS----EEEEEETTTCC
T ss_pred CCeeeCCEEEEEcCCC----EEEEEECCCCC
Confidence 4456678888765544 89999987653
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=34.16 E-value=1.3e+02 Score=26.69 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=36.5
Q ss_pred EEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEEEE
Q 045735 283 YQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 283 ~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v~~ 341 (378)
-.||+.+-.....+.++.... ..-+.+..+|+.++....+.+.+||.+|++++.+..
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEE
Confidence 456666654445666665433 334556678887666444789999999995555544
No 177
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=34.09 E-value=3.2e+02 Score=26.44 Aligned_cols=60 Identities=25% Similarity=0.290 Sum_probs=37.4
Q ss_pred CCCEEEEEEEcC--CeeE-EEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 279 IKKCYQLWVLKE--RCWI-KQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 279 ~~~~~~IW~L~~--~~W~-~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
.+..+.||-+.. ..+. ...++.-......-+.+..+|.+++. ..++.+.+||+.+++..+
T Consensus 403 ~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~ 466 (694)
T 3dm0_A 403 RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR 466 (694)
T ss_dssp TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCccee
Confidence 578999999876 2222 22233322222334555567887776 457889999999886543
No 178
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.92 E-value=36 Score=22.92 Aligned_cols=18 Identities=17% Similarity=0.521 Sum_probs=15.0
Q ss_pred EEEeeCCEEEEEeCCCCe
Q 045735 318 FLESSDGQLLLYDPNAQE 335 (378)
Q Consensus 318 ll~~~~~~~~~yd~~t~~ 335 (378)
++.+.++++|+||..|++
T Consensus 24 ~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 24 VVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp EEEESSSCEEEEETTTTE
T ss_pred EEECCCCCEEEecCcccc
Confidence 445678899999999986
No 179
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=33.91 E-value=2.5e+02 Score=24.77 Aligned_cols=194 Identities=9% Similarity=0.078 Sum_probs=94.5
Q ss_pred cccce-EEEEeCC-ceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccccee
Q 045735 111 PYEGI-FCLMNGN-KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSH 188 (378)
Q Consensus 111 s~~GL-ll~~~~~-~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (378)
+.+|- |+....+ .+ .|||..+++....-.... .....+.+.|..+ + ++.. .. ...
T Consensus 106 ~~~~~~l~~~~~dg~i-~iwd~~~~~~~~~~~~h~---------~~v~~~~~~~~~~-~--l~s~---s~-------d~~ 162 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDI-KVLDSNFNLQREIDQAHV---------SEITKLKFFPSGE-A--LISS---SQ-------DMQ 162 (420)
T ss_dssp CSSSCEEEEEETTSCE-EEECTTSCEEEEETTSSS---------SCEEEEEECTTSS-E--EEEE---ET-------TSE
T ss_pred ecCCCEEEEEECCCCE-EEEeCCCcceeeeccccc---------CccEEEEECCCCC-E--EEEE---eC-------CCe
Confidence 34453 4433333 56 999998887765422211 2334566666432 2 2221 11 346
Q ss_pred EEEEEcCCCCcc-cccCCCCCCCccccCCCceEE--CceEEEEeeecCCccEEEEEECCCceee-eeCCCCCCCCCcccE
Q 045735 189 IAVYNLSTDSWR-GFRGFKLGRDYVCGRIDSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQ-EIESPCTPELTHGPL 264 (378)
Q Consensus 189 ~~vyss~~~~W~-~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l 264 (378)
+.+|+..++.=. ..... .-+. .++.+ +|........+. .|..+|+.+.+.. .+..+......-..+
T Consensus 163 i~iwd~~~~~~~~~~~~h--~~~v-----~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~v~~~ 232 (420)
T 3vl1_A 163 LKIWSVKDGSNPRTLIGH--RATV-----TDIAIIDRGRNVLSASLDG---TIRLWECGTGTTIHTFNRKENPHDGVNSI 232 (420)
T ss_dssp EEEEETTTCCCCEEEECC--SSCE-----EEEEEETTTTEEEEEETTS---CEEEEETTTTEEEEEECBTTBTTCCEEEE
T ss_pred EEEEeCCCCcCceEEcCC--CCcE-----EEEEEcCCCCEEEEEcCCC---cEEEeECCCCceeEEeecCCCCCCCccEE
Confidence 788888765311 11110 0000 22222 454443333333 6888998776543 333322111100001
Q ss_pred E----------------------EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC-CCcceeceEEEECCe-EEEE
Q 045735 265 G----------------------LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP-FIEAYNPLGLWKNGE-IFLE 320 (378)
Q Consensus 265 ~----------------------~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~-~~~~~~~~~~~~~g~-ill~ 320 (378)
. .-+|++.+... ....+.||-+.... ....+.. ......-+.+.+++. +++.
T Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 308 (420)
T 3vl1_A 233 ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH--VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYA 308 (420)
T ss_dssp EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE--TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEE
T ss_pred EEecCCcceeeecccCcccceEEcCCCCEEEEEc--CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEE
Confidence 0 12566555544 56779999876622 2222221 122233344555665 5555
Q ss_pred -eeCCEEEEEeCCCCe--EEEEEE
Q 045735 321 -SSDGQLLLYDPNAQE--MRDLGL 341 (378)
Q Consensus 321 -~~~~~~~~yd~~t~~--~~~v~~ 341 (378)
..++.+.+||+++++ +..+..
T Consensus 309 g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 309 GYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp EETTSEEEEEETTCTTSCSEEEEE
T ss_pred EeCCCeEEEEEcCCCcCchhhhhc
Confidence 567889999999863 444443
No 180
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=33.67 E-value=2.1e+02 Score=24.01 Aligned_cols=95 Identities=14% Similarity=0.109 Sum_probs=51.9
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC-CCcceeceEEEE
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP-FIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~-~~~~~~~~~~~~ 313 (378)
.|..+|+.+.+.. .+.. ..... ..+. ..+|++.+... ....+.||-+....- ...+.. ......-+.+.+
T Consensus 130 ~i~iwd~~~~~~~~~~~~--~~~~v-~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPA--HSDPV-SAVHFNRDGSLIVSSS--YDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp CEEEEETTTCCEEEEECC--CSSCE-EEEEECTTSSEEEEEE--TTSCEEEEETTTCCE--EEEECCSSCCCEEEEEECT
T ss_pred cEEEEECCCCEEEEEecC--CCCcE-EEEEEcCCCCEEEEEe--CCCcEEEEECCCCce--eeEEeccCCCceEEEEECC
Confidence 6888999876543 2221 11110 1111 12566655554 567899998765322 222221 111123344556
Q ss_pred CCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 314 NGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 314 ~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
++..++. ..++.+.+||+++++...
T Consensus 203 ~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 203 NGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 7776665 557889999999887543
No 181
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=33.30 E-value=2.2e+02 Score=24.13 Aligned_cols=108 Identities=13% Similarity=-0.016 Sum_probs=56.1
Q ss_pred CceEEEEeeecCCccEEEEEECCCceee-eeC---CCCCCCCCcccEEEE-CCe-EEEEEecCCCCEEEEEEEcC-----
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQ-EIE---SPCTPELTHGPLGLY-DNS-LSLIALDEIKKCYQLWVLKE----- 290 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~---~P~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~L~~----- 290 (378)
+|........++ .|..+|+.+.+.. .+. ...... .-..+.-. +|+ +.+... ....+.||-+..
T Consensus 223 ~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~ 296 (357)
T 3i2n_A 223 SMNKLVATSLEG---KFHVFDMRTQHPTKGFASVSEKAHKS-TVWQVRHLPQNRELFLTAG--GAGGLHLWKYEYPIQRS 296 (357)
T ss_dssp SCCEEEEEESTT---EEEEEEEEEEETTTEEEEEEEECCSS-CEEEEEEETTEEEEEEEEE--TTSEEEEEEEECCSCC-
T ss_pred CCCEEEEECCCC---eEEEEeCcCCCcccceeeeccCCCcC-CEEEEEECCCCCcEEEEEe--CCCcEEEeecCCCcccc
Confidence 455444444433 7888888664321 111 111111 10122222 455 333333 577999999975
Q ss_pred ------------CeeEEEEEEcCCCcceeceEEEECCeEEE-E-eeCCEEEEEeCCCCe
Q 045735 291 ------------RCWIKQFTIGPFIEAYNPLGLWKNGEIFL-E-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 291 ------------~~W~~~~~i~~~~~~~~~~~~~~~g~ill-~-~~~~~~~~yd~~t~~ 335 (378)
..+.....+........-+.+.++|..++ . ..++.+.+||+.+.+
T Consensus 297 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 297 KKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp -CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 13455555544332233455556777665 3 457889999998653
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=32.89 E-value=2.3e+02 Score=24.10 Aligned_cols=204 Identities=12% Similarity=0.073 Sum_probs=99.6
Q ss_pred eecccceEEEEe--CCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 109 VGPYEGIFCLMN--GNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 109 ~~s~~GLll~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
.-+.+|-+.+.. ...+ +++||.+++...+..... ....++.+|+..+ ++... ... ....
T Consensus 51 ~~~~~g~l~~~~~~~~~i-~~~d~~~~~~~~~~~~~~---------~~~~~i~~~~dg~---l~v~~--~~~----~~~~ 111 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNI-FKINPETKEIKRPFVSHK---------ANPAAIKIHKDGR---LFVCY--LGD----FKST 111 (333)
T ss_dssp EECTTSCEEEEETTTCEE-EEECTTTCCEEEEEECSS---------SSEEEEEECTTSC---EEEEE--CTT----SSSC
T ss_pred EECCCCCEEEEECCCCEE-EEEeCCCCcEEEEeeCCC---------CCcceEEECCCCc---EEEEe--CCC----CCCC
Confidence 334566666543 2356 999999988765432111 1234666776532 22221 000 0012
Q ss_pred eeEEEEEcCCCCcccc-cCCCCCCCccccCCCceEE--CceEEEEeeecC---CccEEEEEECCCceeeeeCCCCCCCCC
Q 045735 187 SHIAVYNLSTDSWRGF-RGFKLGRDYVCGRIDSTYW--NGVCYWLAREEG---ENHVIISFDLSDEVIQEIESPCTPELT 260 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~---~~~~il~fD~~~e~~~~i~~P~~~~~~ 260 (378)
..+.+|+..++.-+.. .... +. .....+.+ +|.+|....... ....|..+|..+.++..+.-. .. .
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~---~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~-~ 183 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLS---TA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--IS-V 183 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSS---SC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ES-S
T ss_pred ceEEEEeCCCCEEEEEEccCc---cC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CC-c
Confidence 3567777776654422 1100 00 00122333 577766543210 013799999987666544210 00 0
Q ss_pred cccEE-EECCe-EEEEEecCCCCEEEEEEEcC--CeeEEEE-EE--cCCC-cceeceEEEECCeEEEEee-CCEEEEEeC
Q 045735 261 HGPLG-LYDNS-LSLIALDEIKKCYQLWVLKE--RCWIKQF-TI--GPFI-EAYNPLGLWKNGEIFLESS-DGQLLLYDP 331 (378)
Q Consensus 261 ~~~l~-~~~g~-L~~~~~~~~~~~~~IW~L~~--~~W~~~~-~i--~~~~-~~~~~~~~~~~g~ill~~~-~~~~~~yd~ 331 (378)
...+. .-+|+ |.+... ....+.+|-++. ....... .+ .... ....-+.+.++|.+++... ++.+..||+
T Consensus 184 ~~~i~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ccceEECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 01122 22554 555433 345777887753 2222110 11 1111 1122245556788877753 568999999
Q ss_pred CCCeEEEEEE
Q 045735 332 NAQEMRDLGL 341 (378)
Q Consensus 332 ~t~~~~~v~~ 341 (378)
+++.++.+..
T Consensus 262 ~g~~~~~~~~ 271 (333)
T 2dg1_A 262 RGYPIGQILI 271 (333)
T ss_dssp TSCEEEEEEC
T ss_pred CCCEEEEEEc
Confidence 8777777654
No 183
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=32.79 E-value=21 Score=21.48 Aligned_cols=18 Identities=33% Similarity=0.261 Sum_probs=14.8
Q ss_pred CCCCcHHHHHHHHhcCCc
Q 045735 11 NADLPADAIIEMLLRLPV 28 (378)
Q Consensus 11 ~~~LP~Dll~eIL~rLP~ 28 (378)
...||.|+-+|||+--..
T Consensus 21 F~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTTSCHHHHHHHTTCCCS
T ss_pred HHHCcHHHHHHHHhcchH
Confidence 678999999999986544
No 184
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=32.64 E-value=2.5e+02 Score=24.50 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=37.5
Q ss_pred CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 279 IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 279 ~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
....+.||-++. ..........-......-+.+..+|..++. ..++.+.+||+++++...
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 567899999877 223333322222222334555668887776 457789999999987544
No 185
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=32.57 E-value=2.5e+02 Score=24.40 Aligned_cols=68 Identities=10% Similarity=-0.040 Sum_probs=34.8
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEE--EcCC--CcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFT--IGPF--IEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~--i~~~--~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~ 337 (378)
+|+..+... ....+.+|-+....-..... .... ...........++.+++...++.+.+||+.+++..
T Consensus 256 ~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 256 DGLHLLTVG--TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp TSSEEEEEE--TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred CCCEEEEec--CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 555554444 56789999887611111000 0000 00111111122455666677788999999887643
No 186
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=31.91 E-value=3.6e+02 Score=26.08 Aligned_cols=111 Identities=17% Similarity=0.170 Sum_probs=58.6
Q ss_pred CceEECceEEEEee-ecCCccEEEEEEC-CCc--eeeeeCCCCCCC--------CCcccEEE--ECCe----EEEEEecC
Q 045735 217 DSTYWNGVCYWLAR-EEGENHVIISFDL-SDE--VIQEIESPCTPE--------LTHGPLGL--YDNS----LSLIALDE 278 (378)
Q Consensus 217 ~~v~~~G~lywl~~-~~~~~~~il~fD~-~~e--~~~~i~~P~~~~--------~~~~~l~~--~~g~----L~~~~~~~ 278 (378)
.++..+|.+|.... .. .|.+||. .++ .|+. ..+.... .....+.. .+|+ +.+...
T Consensus 57 tP~v~~g~vyv~~~~~~----~v~AlD~~~tG~~lW~~-~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFPN----NTFALGLDDPGTILWQD-KPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCCCC----EEEEEeCCCCCcEEEEE-CCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 66888999998876 33 6999999 554 4554 2221110 00112233 3555 554221
Q ss_pred CCCEEEEEEEcC----CeeEEEEEEc-CCCcc-eeceEEEECCeEEEEee------CCEEEEEeCCCCeEEEE
Q 045735 279 IKKCYQLWVLKE----RCWIKQFTIG-PFIEA-YNPLGLWKNGEIFLESS------DGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 279 ~~~~~~IW~L~~----~~W~~~~~i~-~~~~~-~~~~~~~~~g~ill~~~------~~~~~~yd~~t~~~~~v 339 (378)
.. .|..|+- ..|.....-. ....+ ..|+.. +|.|++-.. ++.++.||.+|++...-
T Consensus 130 -dg--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 130 -DG--NVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp -TS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred -CC--EEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 12 3444543 4566532100 00112 234332 667666442 57899999999987654
No 187
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=31.85 E-value=2.7e+02 Score=24.56 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=51.5
Q ss_pred EEEEEECCCceeee-eCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEE-cCCCcc-eeceEEE
Q 045735 237 VIISFDLSDEVIQE-IESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTI-GPFIEA-YNPLGLW 312 (378)
Q Consensus 237 ~il~fD~~~e~~~~-i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i-~~~~~~-~~~~~~~ 312 (378)
.|..+|+.+.+... +......... ..+. .-+|++.+... ....+.||-+.... ....+ ...... ..-+.+.
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTI-YSVDWSRDGALICTSC--RDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCE-EEEEECTTSSCEEEEE--TTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEEC
T ss_pred EEEEEECCCCCccEEEecCCCCCce-EEEEECCCCCEEEEEe--cCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEc
Confidence 68999998775533 3211111111 1111 12566555544 56789999877632 23333 222211 1223444
Q ss_pred ECCeEEEEe----eCCEEEEEeCCCCe
Q 045735 313 KNGEIFLES----SDGQLLLYDPNAQE 335 (378)
Q Consensus 313 ~~g~ill~~----~~~~~~~yd~~t~~ 335 (378)
.++.++... .++.+.+||+++.+
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CCCcEEEEeccCCCCceEEEEcCcccc
Confidence 578877764 57789999998854
No 188
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=31.61 E-value=2.6e+02 Score=24.32 Aligned_cols=154 Identities=14% Similarity=0.060 Sum_probs=75.0
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHG 262 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 262 (378)
...+++++..+..=+.+... . ...+.++.+ +|.+||...... ..|..+|+....-..+-. ... ....
T Consensus 100 ~~~I~~~~~dG~~~~~l~~~--~----~~~P~giavdp~~g~ly~td~~~~--~~I~r~~~dG~~~~~~~~-~~l-~~Pn 169 (318)
T 3sov_A 100 TNRIEVSNLDGSLRKVLFWQ--E----LDQPRAIALDPSSGFMYWTDWGEV--PKIERAGMDGSSRFIIIN-SEI-YWPN 169 (318)
T ss_dssp TTEEEEEETTSCSCEEEECS--S----CSSEEEEEEEGGGTEEEEEECSSS--CEEEEEETTSCSCEEEEC-SSC-SCEE
T ss_pred CCEEEEEECCCCcEEEEEeC--C----CCCccEEEEeCCCCEEEEEecCCC--CEEEEEEcCCCCeEEEEE-CCC-CCcc
Confidence 44677777765432222110 1 112244555 589999875422 289999987543332211 111 1112
Q ss_pred cEEEE--CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEE-CCeEEEEe-eCCEEEEEeCCCCeE-E
Q 045735 263 PLGLY--DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWK-NGEIFLES-SDGQLLLYDPNAQEM-R 337 (378)
Q Consensus 263 ~l~~~--~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~g~ill~~-~~~~~~~yd~~t~~~-~ 337 (378)
.|..- +|+|++... ....|...-++. .-.+ .+.. ..+..|.++.- ++.+++.. ..+.+..+|..+++. +
T Consensus 170 glavd~~~~~lY~aD~--~~~~I~~~d~dG-~~~~--~~~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 170 GLTLDYEEQKLYWADA--KLNFIHKSNLDG-TNRQ--AVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEEEETTTTEEEEEET--TTTEEEEEETTS-CSCE--EEEC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEeccCCEEEEEEC--CCCEEEEEcCCC-CceE--EEec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceE
Confidence 33332 677776554 344444443332 1111 1111 23556766653 45555553 457899999977654 4
Q ss_pred EEEEecee-EEEEEeeecc
Q 045735 338 DLGLRGLW-FYVHCFRESL 355 (378)
Q Consensus 338 ~v~~~~~~-~~~~~y~~sl 355 (378)
.+...... ..+..|.++.
T Consensus 244 ~i~~~~~~P~~i~v~~~~~ 262 (318)
T 3sov_A 244 EIHSDIFSPMDIHAFSQQR 262 (318)
T ss_dssp EEECCCSSCCCEEEECGGG
T ss_pred EEeCCCCCCcEEEEecccc
Confidence 44322111 3455555543
No 189
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=31.55 E-value=2.7e+02 Score=24.56 Aligned_cols=97 Identities=12% Similarity=0.068 Sum_probs=56.4
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
.|..+|+.+.+.. .+..+.. . ..+. .-+|+..+.........+.||-+..........+........-+.+..+
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~---v-~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQ---V-TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSC---E-EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred EEEEEECCCCCEEEEEeCCCc---E-EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 7888888765443 3332111 0 1111 2256666554444678999999988666666655433322233455567
Q ss_pred CeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 315 GEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 315 g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
|..++. ..++.+.+||+.+++..
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC----
T ss_pred CCEEEEEeCCCcEEEEECCCCccc
Confidence 777665 55788999999987643
No 190
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=31.41 E-value=4e+02 Score=26.44 Aligned_cols=205 Identities=13% Similarity=0.153 Sum_probs=99.0
Q ss_pred eeecccceEEEEe-CCceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccc
Q 045735 108 FVGPYEGIFCLMN-GNKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDF 186 (378)
Q Consensus 108 ~~~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (378)
+....+|-+.+.. +..+ +++||.++++......... +.. ........+..|+... +.+.. ..
T Consensus 220 i~~d~~g~lwigt~~~Gl-~~~~~~~~~~~~~~~~~~~-~~~-l~~~~i~~i~~d~~g~----lWigt----------~~ 282 (795)
T 4a2l_A 220 ILQQSPTRIWVATEGAGL-FLINPKTKEIKNYLHSPSN-PKS-ISSNYIRSLAMDSQNR----LWIGT----------FN 282 (795)
T ss_dssp EEEEETTEEEEEEBSSCE-EEEETTTTEEEEECCCTTC-TTS-CSCSBEEEEEECTTSC----EEEEE----------SS
T ss_pred EEEcCCCCEEEEECCCCe-EEEeCCCCeEEEeecCCCC-ccc-cCCCeEEEEEEcCCCC----EEEEe----------CC
Confidence 3334566666665 4467 8999999887765432210 000 0012223344443321 33321 12
Q ss_pred eeEEEEEcCCCCcccccCCCCCCCccccC-C-CceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCC-CCCc
Q 045735 187 SHIAVYNLSTDSWRGFRGFKLGRDYVCGR-I-DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTP-ELTH 261 (378)
Q Consensus 187 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~-~-~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~-~~~~ 261 (378)
.+.+|+..++.++.....+. .+..... . .+++. +|. .|+..... .|..+|..+..|..+...... ....
T Consensus 283 -Gl~~~~~~~~~~~~~~~~~~-~~~~l~~~~i~~i~~D~~g~-lWigt~~~---Gl~~~~~~~~~~~~~~~~~~~~~l~~ 356 (795)
T 4a2l_A 283 -DLNIYHEGTDSFASYSSNPV-ENGSLSQRSVRSIFMDSQGG-MWLGTYFG---GLNYYHPIRNRFKNIRNIPYKNSLSD 356 (795)
T ss_dssp -CEEEEETTTTEEEEECCCTT-STTSCSSSCEEEEEECTTSC-EEEEESSS---CEEEECGGGGSSEEECCCTTSSSCSC
T ss_pred -hhheEcCCCCeEEEEecCCC-CCCCCCCCcEEEEEEeCCcC-EEEEECCC---CeEEeCCCcccceEEcCCCCCCCCCC
Confidence 56778888887776543210 1111111 1 33444 455 45655433 689999998888776432211 1111
Q ss_pred ---ccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC-------CCcceeceEEEECCe-EEEEeeCCEEEEE
Q 045735 262 ---GPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP-------FIEAYNPLGLWKNGE-IFLESSDGQLLLY 329 (378)
Q Consensus 262 ---~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~-------~~~~~~~~~~~~~g~-ill~~~~~~~~~y 329 (378)
..+. ..+|.|.+-.. ...+..+-.+...+.... ... ......-+....+|. +++-..++.++.|
T Consensus 357 ~~V~~i~~d~~g~lWiGt~---~~Gl~~~~~~~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWIGTN---DGGLNLYNPITQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSIL 432 (795)
T ss_dssp SSEEEEEECTTSCEEEEES---SSCEEEECTTTCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CeeEEEEECCCCCEEEEEC---CCCeEEEcCCCCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEE
Confidence 1122 12455555322 223333322223333221 111 011122233344677 7776766789999
Q ss_pred eCCCCeEEEE
Q 045735 330 DPNAQEMRDL 339 (378)
Q Consensus 330 d~~t~~~~~v 339 (378)
|.++++++.+
T Consensus 433 d~~~~~~~~~ 442 (795)
T 4a2l_A 433 HRNSGQVENF 442 (795)
T ss_dssp ETTTCCEEEE
T ss_pred eCCCCcEEEe
Confidence 9999887765
No 191
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=31.06 E-value=79 Score=23.54 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=28.1
Q ss_pred ceEEEEecccc-ceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEE
Q 045735 123 KYISLWNLATQ-ELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLIL 173 (378)
Q Consensus 123 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 173 (378)
.+ ++.||.|+ +|...-.. ...+.+.+|+..+.|+|+.+.
T Consensus 12 ~V-~~~D~~tk~~W~p~g~~-----------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HV-FQIDPNTKKNWVPTSKH-----------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EE-EEECTTTSCSEEESCSS-----------CEEEEEEEETTTTEEEEEEEE
T ss_pred EE-EEEcCCCCCceEeCCCC-----------ceEEEEEEcCCCCEEEEEEcc
Confidence 56 89999996 88653221 134667889888899999863
No 192
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=30.64 E-value=3.8e+02 Score=26.01 Aligned_cols=182 Identities=10% Similarity=0.042 Sum_probs=92.2
Q ss_pred eEEEEeCCceEEEEecccccee-cCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEE
Q 045735 115 IFCLMNGNKYISLWNLATQELR-RLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYN 193 (378)
Q Consensus 115 Lll~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 193 (378)
.|++.....+ ...+..+.+.. .+|-... ....++.||+..+ +|.... . ..-.+..++
T Consensus 8 ~Ll~s~~~~I-~~i~l~~~~~~~~~~~~~~---------~~~~~l~~d~~~~--~lywtD---~-------~~~~I~r~~ 65 (628)
T 4a0p_A 8 FLLFSRRADI-RRISLETNNNNVAIPLTGV---------KEASALDFDVTDN--RIYWTD---I-------SLKTISRAF 65 (628)
T ss_dssp EEEEEETTEE-EEEESSCTTCEEECCCCSC---------SCEEEEEEETTTT--EEEEEE---T-------TTTEEEEEE
T ss_pred EEEEEeCCcE-EEEECCCCCcceEEEcCCC---------CceEEEEEECCCC--EEEEEE---C-------CCCeEEEEE
Confidence 4555655566 77777665432 3443221 2357888887654 333321 1 133455566
Q ss_pred cCCCCcccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEE--C
Q 045735 194 LSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLY--D 268 (378)
Q Consensus 194 s~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~ 268 (378)
..+...+.+-.. . ...+.++.+ +|.+||...... .|..+|+....-..+-. ... .....++.- +
T Consensus 66 ~~g~~~~~v~~~--g----~~~P~GlAvD~~~~~LY~tD~~~~---~I~v~~~dG~~~~~l~~-~~l-~~P~~iavdp~~ 134 (628)
T 4a0p_A 66 MNGSALEHVVEF--G----LDYPEGMAVDWLGKNLYWADTGTN---RIEVSKLDGQHRQVLVW-KDL-DSPRALALDPAE 134 (628)
T ss_dssp TTSCSCEEEECS--S----CSCCCEEEEETTTTEEEEEETTTT---EEEEEETTSTTCEEEEC-SSC-CCEEEEEEETTT
T ss_pred CCCCCcEEEEeC--C----CCCcceEEEEeCCCEEEEEECCCC---EEEEEecCCCcEEEEEe-CCC-CCcccEEEccCC
Confidence 655444333211 1 112355666 489999876554 89999997654333311 111 111234332 6
Q ss_pred CeEEEEEecCCCCEEEEEEEc--CCeeEEEEEEcCCCcceeceEEE--E-CCeEEEEe-eCCEEEEEeCCCCeEE
Q 045735 269 NSLSLIALDEIKKCYQLWVLK--ERCWIKQFTIGPFIEAYNPLGLW--K-NGEIFLES-SDGQLLLYDPNAQEMR 337 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~--~~~W~~~~~i~~~~~~~~~~~~~--~-~g~ill~~-~~~~~~~yd~~t~~~~ 337 (378)
|.|+..... ... .|++.+ ...-..+ + ..+..|.++. . ++.+++.. ..+.+..+|++++..+
T Consensus 135 G~lY~tD~g-~~~--~I~r~~~dG~~~~~l--~---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 135 GFMYWTEWG-GKP--KIDRAAMDGSERTTL--V---PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp TEEEEEECS-SSC--EEEEEETTSCSCEEE--E---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CeEEEeCCC-CCC--EEEEEeCCCCceEEE--E---CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 777765431 223 455543 2221111 1 1345666554 3 35666653 4567888888876553
No 193
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=30.47 E-value=2.5e+02 Score=23.72 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=17.5
Q ss_pred EEEECCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 310 GLWKNGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 310 ~~~~~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
.+..+|.+++...++.++.||..++.....
T Consensus 221 ~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 221 AISEDGTIYVTSLDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp EECTTSCEEEEETTTEEEEECTTSCEEEEE
T ss_pred EECCCCeEEEEcCCCeEEEECCCCCEeEEe
Confidence 334456666666556677777655554443
No 194
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=30.20 E-value=2.8e+02 Score=24.30 Aligned_cols=73 Identities=14% Similarity=0.041 Sum_probs=34.4
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcC------CeeE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKE------RCWI 294 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~------~~W~ 294 (378)
+|.+--....+. .|..+|+.+.+....-+..+ ...-..+. .-+|++.+... .+.+++||-+.. .-|.
T Consensus 280 dg~~lasgs~D~---~V~iwd~~~~~~~~~~~~gH-~~~V~~v~fSpdg~~laS~S--~D~tvrvw~ip~~~~~~~s~~~ 353 (365)
T 4h5i_A 280 KGELAVLASNDN---SIALVKLKDLSMSKIFKQAH-SFAITEVTISPDSTYVASVS--AANTIHIIKLPLNYANYTSMKQ 353 (365)
T ss_dssp TSCEEEEEETTS---CEEEEETTTTEEEEEETTSS-SSCEEEEEECTTSCEEEEEE--TTSEEEEEECCTTTTC------
T ss_pred CCCceEEEcCCC---EEEEEECCCCcEEEEecCcc-cCCEEEEEECCCCCEEEEEe--CCCeEEEEEcCCCCcCccCccc
Confidence 565444433333 78999998876432211111 11101121 22677665554 688999999965 3455
Q ss_pred EEEEEc
Q 045735 295 KQFTIG 300 (378)
Q Consensus 295 ~~~~i~ 300 (378)
++..+.
T Consensus 354 ~l~kl~ 359 (365)
T 4h5i_A 354 KISKLE 359 (365)
T ss_dssp ------
T ss_pred cceeee
Confidence 555443
No 195
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=30.14 E-value=2.4e+02 Score=23.47 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=37.8
Q ss_pred CCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 280 KKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 280 ~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
+..+.||-++.++-.+............-+.+.++|+.++. ..++.+.+||+++++....
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 56899997766444444433322222333455567787766 5578899999999875443
No 196
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=30.06 E-value=2.8e+02 Score=24.19 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=51.2
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEEC
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKN 314 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~ 314 (378)
.|..+|+.+.+.. .+..... .-..+. .-+|++.+... ....+.||-+....- ...+........-+.+.++
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHG---PISVLEFNDTNKLLLSAS--DDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSS---CEEEEEEETTTTEEEEEE--TTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETT
T ss_pred eEEEEEcCCCceeeeeccCCC---ceEEEEECCCCCEEEEEc--CCCEEEEEECCCCcc--ceEecCCCccEEEEEECCC
Confidence 7899999876433 2221111 101222 22565544444 567899998766211 1222222222233445556
Q ss_pred CeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 315 GEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 315 g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
+.++....++.+.+||+++++....
T Consensus 301 ~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 301 DKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp TEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCcEeEe
Confidence 7334446678999999998875443
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=30.04 E-value=4e+02 Score=25.98 Aligned_cols=112 Identities=17% Similarity=0.067 Sum_probs=56.4
Q ss_pred ceEEEEeeecCCccEEEEEECCCc---eeeeeCCCCCCCCCcccEEEE-CCeEEEEEecCCCCEEEEEEEc--CCeeEEE
Q 045735 223 GVCYWLAREEGENHVIISFDLSDE---VIQEIESPCTPELTHGPLGLY-DNSLSLIALDEIKKCYQLWVLK--ERCWIKQ 296 (378)
Q Consensus 223 G~lywl~~~~~~~~~il~fD~~~e---~~~~i~~P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~L~--~~~W~~~ 296 (378)
+.+|+....+.....|...|+.+. .|+.+--+.. ...-..+... +++|.+... ......||+++ ++. ..
T Consensus 298 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~lv~~~~--~~g~~~l~~~~~~~g~--~~ 372 (710)
T 2xdw_A 298 TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-KDVLEWVACVRSNFLVLCYL--HDVKNTLQLHDLATGA--LL 372 (710)
T ss_dssp TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEEEETTTEEEEEEE--ETTEEEEEEEETTTCC--EE
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-CCeEEEEEEEcCCEEEEEEE--ECCEEEEEEEECCCCC--EE
Confidence 456666543322258999999875 4555532222 1110123334 677776554 24455566655 332 22
Q ss_pred EEEcCCCcceeceEEEECC-eEEEEe----eCCEEEEEeCCCCe--EEEE
Q 045735 297 FTIGPFIEAYNPLGLWKNG-EIFLES----SDGQLLLYDPNAQE--MRDL 339 (378)
Q Consensus 297 ~~i~~~~~~~~~~~~~~~g-~ill~~----~~~~~~~yd~~t~~--~~~v 339 (378)
..+........-+++..++ .+++.. ....++.||+++++ .+.+
T Consensus 373 ~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 373 KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp EEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred EecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 3344322111222233344 455542 24689999999877 5444
No 198
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=29.51 E-value=2.5e+02 Score=23.54 Aligned_cols=56 Identities=7% Similarity=0.206 Sum_probs=36.8
Q ss_pred CCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEEEC---CeEEEE-eeCCEEEEEeCCCC
Q 045735 279 IKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLWKN---GEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 279 ~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~---g~ill~-~~~~~~~~yd~~t~ 334 (378)
.+..+.||-+.. ..|.....+.-......-+.+.++ +.++.. ..++.+.+||+++.
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 577899999877 567776666543333344455555 355554 45778999998774
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.86 E-value=3.2e+02 Score=24.60 Aligned_cols=198 Identities=10% Similarity=0.034 Sum_probs=97.6
Q ss_pred eeecccceEEEEeC--CceEEEEeccccceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCccc
Q 045735 108 FVGPYEGIFCLMNG--NKYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYD 185 (378)
Q Consensus 108 ~~~s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (378)
+.-..+|-|.+.+. ..+ .+++|.+++...+..... . .. +.+++..+ .++... .. .
T Consensus 136 la~d~~g~lyv~d~~~~~I-~~id~~~g~~~~~~~~~~---------~-~~-ia~~~~g~--~l~~~d---~~------~ 192 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRV-RLISVDDNKVTTVHPGFK---------G-GK-PAVTKDKQ--RVYSIG---WE------G 192 (409)
T ss_dssp EEECSTTEEEEEETTTTEE-EEEETTTTEEEEEEETCC---------B-CB-CEECTTSS--EEEEEB---SS------T
T ss_pred EEEeCCCCEEEEecCCCcE-EEEECCCCEEEEeeccCC---------C-Cc-eeEecCCC--cEEEEe---cC------C
Confidence 33346677766654 356 999999888776533211 1 11 45555433 222221 10 0
Q ss_pred ceeEEEEEcCCCC-cccccCCCCCCCccccCCCceEE---CceEEEEeeecCCccEEEEEECCCceeeeeC---CCCCCC
Q 045735 186 FSHIAVYNLSTDS-WRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAREEGENHVIISFDLSDEVIQEIE---SPCTPE 258 (378)
Q Consensus 186 ~~~~~vyss~~~~-W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~---~P~~~~ 258 (378)
...+.+++..++. .+........ ......++.+ +|.+|+ ..... .|..+|+.+.....+. ......
T Consensus 193 ~~~I~~~d~~~~~~~~~~g~~~~~---~~~~p~~iav~p~~g~lyv-~d~~~---~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 193 THTVYVYMKASGWAPTRIGQLGST---FSGKIGAVALDETEEWLYF-VDSNK---NFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp TCEEEEEEGGGTTCEEEEEECCTT---SCSCCCBCEECTTSSEEEE-ECTTC---EEEEEETTTCCEEEEEECCCCSCCC
T ss_pred CceEEEEEcCCCceeEEeeeccch---hcCCcEEEEEeCCCCeEEE-EECCC---cEEEEECCCCCEEEEecccccCCCC
Confidence 1255666654432 1222111000 0111133433 689999 33332 7999999877655541 111111
Q ss_pred CCcc-cEEEE--CCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCC------------CcceeceE--EEECCeEEEE
Q 045735 259 LTHG-PLGLY--DNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPF------------IEAYNPLG--LWKNGEIFLE 320 (378)
Q Consensus 259 ~~~~-~l~~~--~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~------------~~~~~~~~--~~~~g~ill~ 320 (378)
.... .+..- +|.|.+... .... |++++. ..-... ++.. ..+..|.+ +.++|.+++.
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~--~~~~--I~~~~~~g~~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQ--NLSS--VYKITPDGECEWF--CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEET--TTTE--EEEECTTCCEEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred CCccccEEEeCCCCEEEEEeC--CCCE--EEEEecCCCEEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 1101 34433 577776543 3344 444443 321111 1211 01334544 4457887776
Q ss_pred e--eCCEEEEEeCCCCeEEEEEE
Q 045735 321 S--SDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 321 ~--~~~~~~~yd~~t~~~~~v~~ 341 (378)
. ..+.+..+|+.++++..+..
T Consensus 340 d~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp ETTTTCEEEEEETTTTEEEEEEE
T ss_pred eCCCCCEEEEEECCCCEEEEEeC
Confidence 4 46789999988888776654
No 200
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=28.56 E-value=2.7e+02 Score=23.49 Aligned_cols=93 Identities=10% Similarity=0.065 Sum_probs=51.0
Q ss_pred EEEEEECCCcee-eeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC
Q 045735 237 VIISFDLSDEVI-QEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG 315 (378)
Q Consensus 237 ~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g 315 (378)
.|..+|+.+.+. ..+...... ....-...+|++.+... ....+.||-++... ....+........-+.+.+++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s~s--~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETP--VRAGKFIARKNWIIVGS--DDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSC--EEEEEEEGGGTEEEEEE--TTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSS
T ss_pred cEEEEECCCCceeEEeeccCCc--EEEEEEeCCCCEEEEEC--CCCEEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCC
Confidence 788888876543 233322111 00111122555555444 57899999877622 223333333233445556677
Q ss_pred eEEEE-eeCCEEEEEeCCCCe
Q 045735 316 EIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 316 ~ill~-~~~~~~~~yd~~t~~ 335 (378)
.+++. ..++.+.+||++++.
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTT
T ss_pred CEEEEECCCCeEEEEECCCCc
Confidence 76665 457789999988763
No 201
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=28.48 E-value=3e+02 Score=24.01 Aligned_cols=90 Identities=7% Similarity=-0.062 Sum_probs=45.1
Q ss_pred EEEEEECCCcee-eeeCCCCCCCCCcccEEE-ECC-eEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEE
Q 045735 237 VIISFDLSDEVI-QEIESPCTPELTHGPLGL-YDN-SLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~-~~g-~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~ 313 (378)
.|..+|+.+.+. ..+..... .-..+.- .+| ++.+... ....+.||-++..+ ....+. ......-+++.+
T Consensus 250 ~i~~wd~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~lasgs--~D~~i~iwd~~~~~--~~~~~~-H~~~V~~vafsP 321 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSAVHSQ---NITGLAYSYHSSPFLASIS--EDCTVAVLDADFSE--VFRDLS-HRDFVTGVAWSP 321 (357)
T ss_dssp CEEEEESSCGGGCEEECCCSS---CEEEEEECSSSSCCEEEEE--TTSCEEEECTTSCE--EEEECC-CSSCEEEEEECS
T ss_pred ceeEEECCCCcEeEEEeccce---eEEEEEEcCCCCCEEEEEe--CCCEEEEEECCCCc--EeEECC-CCCCEEEEEEeC
Confidence 688899877543 22322211 1012221 134 4433333 56789999655422 222222 222223344443
Q ss_pred -CCeEEEE-eeCCEEEEEeCCCC
Q 045735 314 -NGEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 314 -~g~ill~-~~~~~~~~yd~~t~ 334 (378)
++.+++. ..++.+.+||+.++
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCEEEEEcCCCeEEEEECCCC
Confidence 6776665 55788999998764
No 202
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=28.32 E-value=3e+02 Score=23.95 Aligned_cols=127 Identities=6% Similarity=-0.020 Sum_probs=0.0
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP 301 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~ 301 (378)
+|........+. .|..+|+.+.+.... +..........-..-+|.+.+... ....+.||-+....-...+.-..
T Consensus 209 ~g~~l~sgs~Dg---~v~~wd~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~ 282 (354)
T 2pbi_B 209 TGNTFVSGGCDK---KAMVWDMRSGQCVQA-FETHESDVNSVRYYPSGDAFASGS--DDATCRLYDLRADREVAIYSKES 282 (354)
T ss_dssp SCCEEEEEETTS---CEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTT
T ss_pred CCCEEEEEeCCC---eEEEEECCCCcEEEE-ecCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCC
Q ss_pred CCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEEEEecee-EEEEEeeec
Q 045735 302 FIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDLGLRGLW-FYVHCFRES 354 (378)
Q Consensus 302 ~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v~~~~~~-~~~~~y~~s 354 (378)
...-...+.+..+|.+++. ..++.+.+||+.+++....-..... ...+.|-|.
T Consensus 283 ~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 283 IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
No 203
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=28.24 E-value=33 Score=18.63 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=18.9
Q ss_pred eecccceEEEEeCCceEEEEeccc
Q 045735 109 VGPYEGIFCLMNGNKYISLWNLAT 132 (378)
Q Consensus 109 ~~s~~GLll~~~~~~~~~V~NP~T 132 (378)
=++|.||-|....+.+ -||-|-|
T Consensus 14 gdcceglecwkrrrsf-evcvpkt 36 (37)
T 3s3x_D 14 GDCCEGLECWKRRRSF-EVCVPKT 36 (37)
T ss_dssp TCBCTTEEEECCSSSC-CEEEECC
T ss_pred cchhhhHHHHHhccce-eeecCCC
Confidence 3689999999888887 8888765
No 204
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=28.18 E-value=2.7e+02 Score=23.43 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=50.4
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEEEE--C--CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEE
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLGLY--D--NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLW 312 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~--g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~ 312 (378)
.+..+|+....-........... .....+ + +.+.+... ....+.+|-+.... .+..+........-+.+.
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~--~~~~~~~h~~~v~~~~~s 224 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSEW--VSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCK--LKTNHIGHTGYLNTVTVS 224 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSSC--EEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTE--EEEEECCCSSCEEEEEEC
T ss_pred eEEEEEeCCCceEEEEeccccCc--ccceEEccCCCCcEEEEEc--CCCEEEEEECCCCc--eeeEecCCCCcEEEEEEC
Confidence 56777876655444433322111 111111 1 23333333 56789999776532 223333222222334555
Q ss_pred ECCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 313 KNGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 313 ~~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
+++.+++. ..++.+.+||+++.+...
T Consensus 225 ~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 225 PDGSLCASGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEeccCceee
Confidence 67777665 557889999999886543
No 205
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=28.12 E-value=2.9e+02 Score=23.73 Aligned_cols=134 Identities=13% Similarity=0.045 Sum_probs=74.3
Q ss_pred EEEEEcCCCCcccccCCCCCCCccccCCCc-eEECceEEEEeeecCCccEEEEEECCCce-eeeeCCCCCCCCCcccEEE
Q 045735 189 IAVYNLSTDSWRGFRGFKLGRDYVCGRIDS-TYWNGVCYWLAREEGENHVIISFDLSDEV-IQEIESPCTPELTHGPLGL 266 (378)
Q Consensus 189 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~-v~~~G~lywl~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~l~~ 266 (378)
+.+++..++.=...- .+ .-. +..+ ...++.+|-++.... .+..||..+.+ ...++.+.. . ..|..
T Consensus 77 v~~iD~~Tgkv~~~~-l~-~~~----FgeGit~~g~~Ly~ltw~~~---~v~V~D~~Tl~~~~ti~~~~e--G--wGLt~ 143 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RL-GNI----FAEGLASDGERLYQLTWTEG---LLFTWSGMPPQRERTTRYSGE--G--WGLCY 143 (268)
T ss_dssp EEECCSSCSSCSEEE-EC-TTC----CEEEEEECSSCEEEEESSSC---EEEEEETTTTEEEEEEECSSC--C--CCEEE
T ss_pred EEEEECCCCcEEeEE-CC-CCc----ceeEEEEeCCEEEEEEccCC---EEEEEECCcCcEEEEEeCCCc--e--eEEec
Confidence 777777776422211 11 111 1122 344667888876654 89999998754 456776533 1 34555
Q ss_pred ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCC---cce--eceEEEECCeEEEEe-eCCEEEEEeCCCCeEEE-E
Q 045735 267 YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFI---EAY--NPLGLWKNGEIFLES-SDGQLLLYDPNAQEMRD-L 339 (378)
Q Consensus 267 ~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~---~~~--~~~~~~~~g~ill~~-~~~~~~~yd~~t~~~~~-v 339 (378)
-+++|.+.. ... .|++++-..=..+.+|.... .+. .-+. +.+|+++... ....+...|++|+++.. |
T Consensus 144 Dg~~L~vSd---Gs~--~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe-~~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 144 WNGKLVRSD---GGT--MLTFHEPDGFALVGAVQVKLRGQPVELINELE-CANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp ETTEEEEEC---SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred CCCEEEEEC---CCC--EEEEEcCCCCeEEEEEEeCCCCcccccccccE-EeCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 566666632 122 67777762222333343211 011 1122 2388887654 46789999999998754 5
Q ss_pred EE
Q 045735 340 GL 341 (378)
Q Consensus 340 ~~ 341 (378)
..
T Consensus 218 dl 219 (268)
T 3nok_A 218 DA 219 (268)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 206
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=27.67 E-value=2.9e+02 Score=23.70 Aligned_cols=68 Identities=19% Similarity=0.214 Sum_probs=39.4
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCC----ee-EEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKER----CW-IKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~----~W-~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
+|++.+... .+..+.||-+... .. .....+.-......-+.+.+++.+++. ..++.+.+||+++++..
T Consensus 38 d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 38 DSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCCEEEEEc--CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 455544444 5678999998751 11 222223322222233445567777665 45788999999987643
No 207
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=27.21 E-value=3e+02 Score=24.71 Aligned_cols=56 Identities=11% Similarity=0.220 Sum_probs=31.7
Q ss_pred CCCEEEEEEEcC---CeeEE--EEEEcCCCcceeceEEEE-CCeEEEE-eeCCEEEEEeCCCC
Q 045735 279 IKKCYQLWVLKE---RCWIK--QFTIGPFIEAYNPLGLWK-NGEIFLE-SSDGQLLLYDPNAQ 334 (378)
Q Consensus 279 ~~~~~~IW~L~~---~~W~~--~~~i~~~~~~~~~~~~~~-~g~ill~-~~~~~~~~yd~~t~ 334 (378)
....+.||-+.. ..+.. ...+........-+.+.. ++.+++. ..++.+.+||++++
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 577899999876 22322 122222221122234444 4555554 56788999999976
No 208
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=26.80 E-value=2.4e+02 Score=25.12 Aligned_cols=67 Identities=9% Similarity=0.026 Sum_probs=39.8
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC--CCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP--FIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~--~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~ 338 (378)
+|.+.+... ....+.||-+....- ...+.. ......-+.+.+++..++. ..++.+.+||+++++...
T Consensus 181 ~~~~l~~~~--~d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALT--NLSRVIIFDIRTLER--LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEE--TTSEEEEEETTTCCE--EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEe--CCCeEEEEeCCCCee--eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 455555444 577899998876222 222222 2222333445557777665 557779999999876533
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=26.35 E-value=2.9e+02 Score=23.23 Aligned_cols=111 Identities=11% Similarity=0.065 Sum_probs=57.3
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEc
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIG 300 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~ 300 (378)
||.++. .... .|..||.+.+....+..|...... ..-...+|++.+.... . .-.|+.++. .+......+.
T Consensus 47 dG~ilv-s~~~----~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~-~--~~~v~~vd~~Gk~l~~~~~~ 117 (276)
T 3no2_A 47 AGEILF-SYSK----GAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWCG-H--PSTILEVNMKGEVLSKTEFE 117 (276)
T ss_dssp TSCEEE-ECBS----EEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEES-T--TEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEE-eCCC----CEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEecC-C--CCEEEEEeCCCCEEEEEecc
Confidence 777666 3332 799999955544555555321111 0111236777665442 1 235666655 3333333333
Q ss_pred CC---C-cceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEEEE
Q 045735 301 PF---I-EAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 301 ~~---~-~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v~~ 341 (378)
.. + ...+-+....+|.+++. ..++.+..||.+.+.+-++..
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEEC
Confidence 11 1 01112344457887776 456789999999555444443
No 210
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=26.32 E-value=2.9e+02 Score=23.20 Aligned_cols=71 Identities=21% Similarity=0.205 Sum_probs=42.9
Q ss_pred CeEEEEEecCCCCEEEEEEEcC---CeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEEEE
Q 045735 269 NSLSLIALDEIKKCYQLWVLKE---RCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~---~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v~~ 341 (378)
+++.+... .+..+.||-+.. ..-.....+........-+.+.++|..++. ..++.+..++..+........
T Consensus 51 ~~~l~S~s--~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~ 125 (340)
T 4aow_A 51 PDMILSAS--RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV 125 (340)
T ss_dssp TTEEEEEE--TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEc--CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec
Confidence 45544444 567899999976 223333444333322333455567777665 457788899998887655543
No 211
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.28 E-value=71 Score=24.04 Aligned_cols=42 Identities=0% Similarity=-0.288 Sum_probs=25.4
Q ss_pred ceEEEEeccccceecCCCCcCCCCCCcccccceeEEee---cCCCCCEEEEEEE
Q 045735 123 KYISLWNLATQELRRLPKCRASLPPHTTIHNSSAGFGL---DIVSNDYKLVLIL 173 (378)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~---d~~~~~ykvv~~~ 173 (378)
.+ +++||.|+.|...-.... ....+.+.+ |...+.|+|+...
T Consensus 21 ~V-m~~D~~~~~W~p~~~g~l--------s~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VV-MTRDDSSGGWFPQEGGGI--------SRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EE-EEECTTSSSSEECSCCSC--------EEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EE-eeEcCCCCCEeeCCCCCc--------ccEEEEEecCCCCCCCCEEEEEEEE
Confidence 55 899999998865432210 112223333 5567799998874
No 212
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=26.26 E-value=2.9e+02 Score=23.14 Aligned_cols=106 Identities=13% Similarity=0.151 Sum_probs=54.7
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeee-eCCCCCCCCCcccEEE--ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQE-IESPCTPELTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKERCWIKQFT 298 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~ 298 (378)
+|.+......++ .|..+|+.+.+... +..... ....... -+|+..+... ....+.||-+.... ....
T Consensus 160 ~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~--~~~~ 229 (312)
T 4ery_A 160 DGSLIVSSSYDG---LCRIWDTASGQCLKTLIDDDN---PPVSFVKFSPNGKYILAAT--LDNTLKLWDYSKGK--CLKT 229 (312)
T ss_dssp TSSEEEEEETTS---CEEEEETTTCCEEEEECCSSC---CCEEEEEECTTSSEEEEEE--TTTEEEEEETTTTE--EEEE
T ss_pred CCCEEEEEeCCC---cEEEEECCCCceeeEEeccCC---CceEEEEECCCCCEEEEEc--CCCeEEEEECCCCc--EEEE
Confidence 455443333333 78899998765432 221111 1111122 2566555444 56799999887632 2222
Q ss_pred EcCCC-cceece-EEE-ECCeEEEE-eeCCEEEEEeCCCCeEE
Q 045735 299 IGPFI-EAYNPL-GLW-KNGEIFLE-SSDGQLLLYDPNAQEMR 337 (378)
Q Consensus 299 i~~~~-~~~~~~-~~~-~~g~ill~-~~~~~~~~yd~~t~~~~ 337 (378)
+.... ...... .+. .++.+++. ..++.+.+||+++++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 32211 111111 222 35666665 45778999999998754
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=25.91 E-value=3e+02 Score=23.23 Aligned_cols=102 Identities=10% Similarity=0.077 Sum_probs=53.0
Q ss_pred cEEEEEECCCceeeeeCCCCCCCCCcccEE-EECCe-EEEEEecC---CCCEEEEEEEcCCeeEEEEEE-cCCCcceece
Q 045735 236 HVIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNS-LSLIALDE---IKKCYQLWVLKERCWIKQFTI-GPFIEAYNPL 309 (378)
Q Consensus 236 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~-L~~~~~~~---~~~~~~IW~L~~~~W~~~~~i-~~~~~~~~~~ 309 (378)
..|..+|..++++..+. .. . ....+. .-+|+ |.+..... ....+.+|-++.........+ ........-+
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~--~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DL--D-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EE--S-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred CeEEEEcCCCCcEEEEe-cC--C-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 37999999887776653 11 1 111122 22565 44433310 024566665554332222221 1111111224
Q ss_pred EEEECCeEEEEeeCCEEEEEeCCCCeEEEEEEe
Q 045735 310 GLWKNGEIFLESSDGQLLLYDPNAQEMRDLGLR 342 (378)
Q Consensus 310 ~~~~~g~ill~~~~~~~~~yd~~t~~~~~v~~~ 342 (378)
.+..+|.+++.. .+.+..||++++.+..+...
T Consensus 245 ~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 245 CVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred EECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 556678876655 45699999988887777653
No 214
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=25.62 E-value=3.1e+02 Score=23.33 Aligned_cols=139 Identities=12% Similarity=-0.030 Sum_probs=76.2
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceE-ECceEEEEeeecCCccEEEEEECCCc-eeeeeCCCCCCCCCccc
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTY-WNGVCYWLAREEGENHVIISFDLSDE-VIQEIESPCTPELTHGP 263 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~il~fD~~~e-~~~~i~~P~~~~~~~~~ 263 (378)
...+.+++..++.=.. .. .++.. ....++. .++.+|.++.... .+..+|..+. ....++.+ ... ...
T Consensus 43 ~s~v~~iD~~tg~v~~--~i--~l~~~-~fgeGi~~~g~~lyv~t~~~~---~v~viD~~t~~v~~~i~~g-~~~--g~g 111 (266)
T 2iwa_A 43 RSSVRQVALQTGKVEN--IH--KMDDS-YFGEGLTLLNEKLYQVVWLKN---IGFIYDRRTLSNIKNFTHQ-MKD--GWG 111 (266)
T ss_dssp TCEEEEEETTTCCEEE--EE--ECCTT-CCEEEEEEETTEEEEEETTCS---EEEEEETTTTEEEEEEECC-SSS--CCE
T ss_pred CCEEEEEECCCCCEEE--EE--ecCCC-cceEEEEEeCCEEEEEEecCC---EEEEEECCCCcEEEEEECC-CCC--eEE
Confidence 5678889988876222 11 11111 0112333 3558998887654 8999999875 44566665 111 123
Q ss_pred EEEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCC---cceec--eEEEECCeEEEEe-eCCEEEEEeCCCCeEE
Q 045735 264 LGLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFI---EAYNP--LGLWKNGEIFLES-SDGQLLLYDPNAQEMR 337 (378)
Q Consensus 264 l~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~---~~~~~--~~~~~~g~ill~~-~~~~~~~yd~~t~~~~ 337 (378)
|..-+++|.+ +. ... .|++++-..-....+|.... .+..+ +.+. +|.++... ..+.+...|++|+++.
T Consensus 112 lt~Dg~~l~v-s~--gs~--~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 112 LATDGKILYG-SD--GTS--ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLL 185 (266)
T ss_dssp EEECSSSEEE-EC--SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEE
T ss_pred EEECCCEEEE-EC--CCC--eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEE
Confidence 4433455664 22 222 67777763333444444211 11122 2233 78877654 3578999999998764
Q ss_pred -EEEE
Q 045735 338 -DLGL 341 (378)
Q Consensus 338 -~v~~ 341 (378)
+|..
T Consensus 186 ~~I~~ 190 (266)
T 2iwa_A 186 GWILL 190 (266)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 4544
No 215
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=25.09 E-value=2.9e+02 Score=22.78 Aligned_cols=68 Identities=12% Similarity=0.071 Sum_probs=41.1
Q ss_pred ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 267 YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 267 ~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
-+|.+ +... ....+.||-+... ..+..+........-+.+.+++.++....++.+.+||+++++....
T Consensus 194 ~~~~~-~~~~--~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 194 DDGHF-ISCS--NDGLIKLVDMHTG--DVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp ETTEE-EEEE--TTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEE
T ss_pred CCCeE-EEcc--CCCeEEEEECCch--hhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEE
Confidence 36662 2233 5778999987752 2333333222223334555577665567788999999999875544
No 216
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=24.72 E-value=1.1e+02 Score=27.12 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=50.6
Q ss_pred EEEEEECCCceee-eeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcC--CeeEEEEEEcCCCcceeceEEE
Q 045735 237 VIISFDLSDEVIQ-EIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKE--RCWIKQFTIGPFIEAYNPLGLW 312 (378)
Q Consensus 237 ~il~fD~~~e~~~-~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~--~~W~~~~~i~~~~~~~~~~~~~ 312 (378)
.|..+|+.+.... .+..... ...-..+. .-+|++.+... ....+.||-++. ........+.....-..-+.+.
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~--~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 122 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQV-DSKFNDLDWSHNNKIIAGAL--DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFN 122 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCC-SSCEEEEEECSSSSCEEEEE--SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred eEEEEEccCCCCCcEEEEEec-CCceEEEEECCCCCeEEEEc--cCCeEEEeecccccccccchhhccCCccceEEEEEc
Confidence 6788888776432 1111111 11101111 12555554444 467899998876 2333444444333222334444
Q ss_pred EC-CeEEEE-eeCCEEEEEeCCCCe
Q 045735 313 KN-GEIFLE-SSDGQLLLYDPNAQE 335 (378)
Q Consensus 313 ~~-g~ill~-~~~~~~~~yd~~t~~ 335 (378)
++ +.+++. ..++.+.+||+++++
T Consensus 123 ~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 123 AKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp SSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCc
Confidence 44 565555 457789999998875
No 217
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=23.90 E-value=4.8e+02 Score=24.85 Aligned_cols=111 Identities=8% Similarity=-0.028 Sum_probs=61.0
Q ss_pred CceEEEEeeecCCccEEEEEECCCceeeeeC-CCCCCCC--C---cccEEEE-CCeEEEEEecCCCCEEEEEEEcC--Ce
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVIQEIE-SPCTPEL--T---HGPLGLY-DNSLSLIALDEIKKCYQLWVLKE--RC 292 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~--~---~~~l~~~-~g~L~~~~~~~~~~~~~IW~L~~--~~ 292 (378)
||.+|+....++ ...|..+|+.+.++..+. ....... . ...+... +|++.+... . ....||.++- ..
T Consensus 252 dg~l~~~~~~~~-~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~--~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 252 DGSLIVATDRTG-WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG--K-GAAVLGILDPESGE 327 (662)
T ss_dssp TSCEEEEECTTS-SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB--S-SSCEEEEEETTTTE
T ss_pred CCeEEEEECCCC-CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE--c-CccEEEEEECCCCc
Confidence 788777665432 147999999777765542 1111100 0 0123332 677665554 3 7889999875 43
Q ss_pred eEEEEEEcCCCcceece-EEEECCeEEEEe-eC---CEEEEEeCCCCeEEEEE
Q 045735 293 WIKQFTIGPFIEAYNPL-GLWKNGEIFLES-SD---GQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 293 W~~~~~i~~~~~~~~~~-~~~~~g~ill~~-~~---~~~~~yd~~t~~~~~v~ 340 (378)
. ..+.........+ .. .++.+++.. .. ..++.+|+++++.+.+.
T Consensus 328 ~---~~l~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 328 L---VDAAGPWTEWAATLTV-SGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp E---EECCSSCCEEEEEEEE-ETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred E---EEecCCCCeEEEEEec-CCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 2 3333222222233 22 345555543 32 36899999999887763
No 218
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=23.83 E-value=3.2e+02 Score=22.91 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=41.3
Q ss_pred CCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCCCeEEEE
Q 045735 268 DNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 268 ~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t~~~~~v 339 (378)
++.+.+... ....+.||-+... ..+..+........-+.+.+++.+++. ..++.+.+||.++++..+.
T Consensus 197 ~~~~l~s~s--~D~~i~iWd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 197 DKPYMITAS--DDLTIKIWDYQTK--SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp TCCEEEEEE--TTSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCEEEEEc--CCCeEEEEeCCCC--ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 344444443 5789999987652 233333322222333455567777666 4577899999999876543
No 219
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=23.80 E-value=5.3e+02 Score=25.40 Aligned_cols=201 Identities=11% Similarity=0.026 Sum_probs=96.2
Q ss_pred ccceEEEEe-CCceEEEEeccccceecCCCCcCC-CCCCcccccceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeE
Q 045735 112 YEGIFCLMN-GNKYISLWNLATQELRRLPKCRAS-LPPHTTIHNSSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHI 189 (378)
Q Consensus 112 ~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 189 (378)
.+|-|-+.. ...+ ..++|.++.+..+...+.. ...+ ........+..|.... +.+.. . ...+
T Consensus 322 ~~g~lWigt~~~Gl-~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~v~~i~~d~~g~----lWigt---~-------~~Gl 385 (781)
T 3v9f_A 322 SFNNIWIGTWGGGI-NFISNAPPTFHTWSYSPTQMNESS-LSNKVVSSVCDDGQGK----LWIGT---D-------GGGI 385 (781)
T ss_dssp SSCCEEEEEBSSCE-EEECSSCCSCEEEC----CCCSSC-CSSSCEEEEEECTTSC----EEEEE---B-------SSCE
T ss_pred CCCCEEEEecCCeE-EEeCCCCCcceeeccCccccccCC-CCCcceEEEEEcCCCC----EEEEe---C-------CCcE
Confidence 345554444 4567 8889988887765432110 0000 0112334455554321 23321 0 2235
Q ss_pred EEEEcCCCCcccccCCCCCCCccccCC-CceEE--CceEEEEeeecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE
Q 045735 190 AVYNLSTDSWRGFRGFKLGRDYVCGRI-DSTYW--NGVCYWLAREEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL 266 (378)
Q Consensus 190 ~vyss~~~~W~~~~~~~~~~~~~~~~~-~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 266 (378)
..|+..++.++.... +..++. .. .+++. +|.+ |+..... .|..||..++++..+..+......-..+.+
T Consensus 386 ~~~~~~~~~~~~~~~-~~~~~~---~~v~~i~~d~~g~l-Wigt~~~---Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 457 (781)
T 3v9f_A 386 NVFENGKRVAIYNKE-NRELLS---NSVLCSLKDSEGNL-WFGTYLG---NISYYNTRLKKFQIIELEKNELLDVRVFYE 457 (781)
T ss_dssp EEEETTEEEEECC------CCC---SBEEEEEECTTSCE-EEEETTE---EEEEECSSSCEEEECCSTTTCCCCEEEEEE
T ss_pred EEEECCCCeEEEccC-CCCCCC---cceEEEEECCCCCE-EEEeccC---CEEEEcCCCCcEEEeccCCCCCCeEEEEEE
Confidence 566666655544321 001110 11 33444 4554 5544322 799999999999887644111111122322
Q ss_pred -ECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCC---CcceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEEE
Q 045735 267 -YDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPF---IEAYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 267 -~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~---~~~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v~ 340 (378)
.+|.|.+... ..+..+-.+...|......... .....-+....+|.+++-+..+.++.||.++++++.+.
T Consensus 458 d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 458 DKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp CTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred CCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 2567665332 2333332222556554322211 11122233444688888776556999999999887653
No 220
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=23.75 E-value=1.1e+02 Score=24.27 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=27.6
Q ss_pred ceEEEEecccc-ceecCCCCcCCCCCCcccccceeEEeecCCCCCEEEEEEE
Q 045735 123 KYISLWNLATQ-ELRRLPKCRASLPPHTTIHNSSAGFGLDIVSNDYKLVLIL 173 (378)
Q Consensus 123 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 173 (378)
.+ ++.||.|+ +|+..-.. ...+.+.+|+..+.|+|+.+.
T Consensus 17 ~V-m~~D~~tk~~WvP~g~~-----------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HV-FQIDPNTKKNWVPTSKH-----------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EE-EEECTTSSCCSEESCSS-----------CEEEEEEEETTTTEEEEEEEE
T ss_pred EE-EEECCCCCCceeecCCC-----------CeEEEEEEcCCCCEEEEEEcc
Confidence 55 89999997 88643221 124566789888899999863
No 221
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=23.75 E-value=6.4e+02 Score=26.31 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=53.2
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcC--------CC---c
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGP--------FI---E 304 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~--------~~---~ 304 (378)
.|..+|+.+.+....-. ...... ..+. .-+|+..+... ....+.+|-+....-........ .. .
T Consensus 724 ~v~vwd~~~~~~~~~~~-~h~~~v-~~~~~sp~~~~l~s~s--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMF-GHTNSV-NHCRFSPDDELLASCS--ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp CEEEEETTSSSEEEEEC-CCSSCE-EEEEECSSTTEEEEEE--SSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred eEEEEECCCcchhheec-CCCCCE-EEEEEecCCCEEEEEE--CCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 68889998765433211 111111 1111 22566555444 56789999887622222221110 00 0
Q ss_pred ceeceEEEECCeEEEEeeCCEEEEEeCCCCeEEEE
Q 045735 305 AYNPLGLWKNGEIFLESSDGQLLLYDPNAQEMRDL 339 (378)
Q Consensus 305 ~~~~~~~~~~g~ill~~~~~~~~~yd~~t~~~~~v 339 (378)
...-+.+.++|..++...++.+..||..+++....
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeE
Confidence 11223445578887777778999999999875443
No 222
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=23.16 E-value=4.5e+02 Score=24.30 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=52.7
Q ss_pred EEEEEECCCceeeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECC
Q 045735 237 VIISFDLSDEVIQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNG 315 (378)
Q Consensus 237 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g 315 (378)
.|..+|...+....+...... -..+. .-+|++.+... ....+.+|-++.. .+..+.....-..-+.+.+++
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~--~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd~ 479 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSSS---VWGVAFSPDDQTIASAS--DDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDG 479 (577)
T ss_dssp EEEEECTTCCEEEEEECCSSC---EEEEEECTTSSEEEEEE--TTSEEEEEETTSC---EEEEEECCSSCEEEEEECTTS
T ss_pred EEEEEeCCCCEEEEecCCCCC---eEEEEECCCCCEEEEEc--CCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCCC
Confidence 677788766555544322111 01122 12555554444 5678999975432 222233222223335566678
Q ss_pred eEEEE-eeCCEEEEEeCCCCeEEEEE
Q 045735 316 EIFLE-SSDGQLLLYDPNAQEMRDLG 340 (378)
Q Consensus 316 ~ill~-~~~~~~~~yd~~t~~~~~v~ 340 (378)
.++.. ..++.+.+||...+..+.+.
T Consensus 480 ~~las~~~d~~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 480 QTIASASDDKTVKLWNRNGQLLQTLT 505 (577)
T ss_dssp CEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEcCCCCEEEEEe
Confidence 87765 55778999998776666554
No 223
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=23.02 E-value=4.1e+02 Score=23.83 Aligned_cols=174 Identities=10% Similarity=0.072 Sum_probs=85.0
Q ss_pred ceeEEeecCCCCCEEEEEEEEEeecCcCCcccceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE---CceEEEEee
Q 045735 154 SSAGFGLDIVSNDYKLVLILTLLDTKIDFYYDFSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW---NGVCYWLAR 230 (378)
Q Consensus 154 ~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~ 230 (378)
...++.+|...+. +.... . ....+++++..+..-+.+... . ...+.++.+ +|.+||...
T Consensus 160 ~p~glavD~~~~~--lY~~d----~------~~~~I~~~~~~g~~~~~l~~~--~----~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 160 APDGLAVDWIHSN--IYWTD----S------VLGTVSVADTKGVKRKTLFRE--N----GSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp CEEEEEEETTTTE--EEEEE----T------TTTEEEEECTTTCSEEEEEEC--S----SCCEEEEEEETTTTEEEEEEC
T ss_pred CcccEEEEecCCc--eEEEE----C------CCCeEEEEeCCCCceEEEEeC--C----CCCcceEEEecccCeEEEEeC
Confidence 3457777765442 22221 1 134567777765543333210 1 111244555 589999875
Q ss_pred ecCCccEEEEEECCCceeeeeCCCCCCCCCcccEEE--ECCeEEEEEecCCCCEEEEEEEcC-CeeEEEEEEcCCCccee
Q 045735 231 EEGENHVIISFDLSDEVIQEIESPCTPELTHGPLGL--YDNSLSLIALDEIKKCYQLWVLKE-RCWIKQFTIGPFIEAYN 307 (378)
Q Consensus 231 ~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~L~~-~~W~~~~~i~~~~~~~~ 307 (378)
.... .|..+|+....-..+-. ... .....|.. .+++|++... ... .||+.+- +.-.++. +.....+..
T Consensus 222 ~~~~--~I~~~~~dG~~~~~~~~-~~l-~~P~glavd~~~~~lY~aD~--~~~--~I~~~d~dG~~~~~~-~~~~~~l~~ 292 (400)
T 3p5b_L 222 GTPA--KIKKGGLNGVDIYSLVT-ENI-QWPNGITLDLLSGRLYWVDS--KLH--SISSIDVNGGNRKTI-LEDEKRLAH 292 (400)
T ss_dssp SSSC--CEEEEETTSCSCEEEEC-SSC-SCEEEEEEETTTTEEEEEET--TTT--EEEEEETTSCCCEEE-EECSSTTSS
T ss_pred CCCC--EEEEEeCCCCccEEEEE-CCC-CceEEEEEEeCCCEEEEEEC--CCC--EEEEEeCCCCccEEE-EeCCCCCCC
Confidence 4322 78999987644333211 111 11123333 3677777554 333 4555543 2111111 122123556
Q ss_pred ceEEEE-CCeEEEEe-eCCEEEEEeCCCCe-EEEEEEecee--EEEEEeeecc
Q 045735 308 PLGLWK-NGEIFLES-SDGQLLLYDPNAQE-MRDLGLRGLW--FYVHCFRESL 355 (378)
Q Consensus 308 ~~~~~~-~g~ill~~-~~~~~~~yd~~t~~-~~~v~~~~~~--~~~~~y~~sl 355 (378)
|+++.- ++.+++.. ..+.+..+|..+++ .+.+. .+.. ..+..|-+..
T Consensus 293 P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v~~~~~ 344 (400)
T 3p5b_L 293 PFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA-ENLLSPEDMVLFHNLT 344 (400)
T ss_dssp EEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE-CSCSCEEEEEEESGGG
T ss_pred CEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe-cCCCCCceEEEEeecc
Confidence 777654 45565553 45679999966654 44443 2222 4555565543
No 224
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=22.47 E-value=4.9e+02 Score=24.49 Aligned_cols=107 Identities=14% Similarity=0.008 Sum_probs=62.5
Q ss_pred CceEEEEeeecCCccEEEEEECCCcee-eeeCCCCCCCCCcccE-EEECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEE
Q 045735 222 NGVCYWLAREEGENHVIISFDLSDEVI-QEIESPCTPELTHGPL-GLYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTI 299 (378)
Q Consensus 222 ~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l-~~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i 299 (378)
+|.+|-....+. .|..+|..+.+. ..++.... . ..+ ..-+|+..++... ...+.+|-+....-..+.++
T Consensus 148 ~~~~~vs~~~d~---~V~v~D~~t~~~~~~i~~g~~---~-~~v~~spdg~~l~v~~~--d~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 148 PNLFSVTLRDAG---QIALVDGDSKKIVKVIDTGYA---V-HISRMSASGRYLLVIGR--DARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp GGEEEEEEGGGT---EEEEEETTTCCEEEEEECSTT---E-EEEEECTTSCEEEEEET--TSEEEEEETTSSSCEEEEEE
T ss_pred CCEEEEEEcCCC---eEEEEECCCceEEEEEecCcc---c-ceEEECCCCCEEEEECC--CCeEEEEECcCCCCcEEEEE
Confidence 677776555543 799999987654 44443222 1 112 2336766555552 38999998832112233444
Q ss_pred cCCCcceeceEEEE----CCeEEEE-e-eCCEEEEEeCCCCeEEE
Q 045735 300 GPFIEAYNPLGLWK----NGEIFLE-S-SDGQLLLYDPNAQEMRD 338 (378)
Q Consensus 300 ~~~~~~~~~~~~~~----~g~ill~-~-~~~~~~~yd~~t~~~~~ 338 (378)
.... ..+-+.+.+ +|+.++. . .++.+.++|.+|.+...
T Consensus 219 ~~g~-~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~ 262 (543)
T 1nir_A 219 KIGI-EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ 262 (543)
T ss_dssp ECCS-EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEE
T ss_pred ecCC-CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccce
Confidence 4222 234456777 7876665 3 46789999999876543
No 225
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=22.39 E-value=2.7e+02 Score=26.63 Aligned_cols=62 Identities=10% Similarity=0.118 Sum_probs=37.6
Q ss_pred CeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEECCeEEEE-eeCCEEEEEeCCC
Q 045735 269 NSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWKNGEIFLE-SSDGQLLLYDPNA 333 (378)
Q Consensus 269 g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~~g~ill~-~~~~~~~~yd~~t 333 (378)
|++.+... ....+.||-++............ .....-+.+.++|..++. ..++.+..||.++
T Consensus 460 g~~lasgs--~D~~v~lwd~~~~~~~~~~~~~h-~~~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 460 KQFVAVGG--QDSKVHVYKLSGASVSEVKTIVH-PAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp SCEEEEEE--TTSEEEEEEEETTEEEEEEEEEC-SSCEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred CCEEEEeC--CCCeEEEEEccCCceeeeeccCC-CCceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 44433333 56789999987754443333222 222334566678887776 4567799999876
No 226
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=21.99 E-value=3.9e+02 Score=23.11 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=34.3
Q ss_pred CCCEEEEEEEcCCeeEEEEEEcC---C---CcceeceEEEECCeEEEE-eeC---CEEEEEeCCCCeEE
Q 045735 279 IKKCYQLWVLKERCWIKQFTIGP---F---IEAYNPLGLWKNGEIFLE-SSD---GQLLLYDPNAQEMR 337 (378)
Q Consensus 279 ~~~~~~IW~L~~~~W~~~~~i~~---~---~~~~~~~~~~~~g~ill~-~~~---~~~~~yd~~t~~~~ 337 (378)
....+.||-+....-. ..+.. . ..-..-+.+..++.+++. ..+ +.+.+||+++++..
T Consensus 205 ~dg~i~i~d~~~~~~~--~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 205 NNGTVQISELSTLRPL--YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp TTSEEEEEETTTTEEE--EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCCcEEEEECCCCcee--EEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 6789999988763322 22322 1 212233445556776665 445 68999999887643
No 227
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=21.73 E-value=4.4e+02 Score=24.46 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=44.8
Q ss_pred CceEECceEEEEeeecCC---ccEEEEEECCCceeeeeCCCCCCCCCcccEEEECCeEEEEEe
Q 045735 217 DSTYWNGVCYWLAREEGE---NHVIISFDLSDEVIQEIESPCTPELTHGPLGLYDNSLSLIAL 276 (378)
Q Consensus 217 ~~v~~~G~lywl~~~~~~---~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~~~~~ 276 (378)
+--+.+|.+|.++..... ...+..-+...+.|..+.+|...+.......-.++-|.++..
T Consensus 343 CvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 343 CIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred hhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 335679999998865432 156777788889999999997766655666777888988754
No 228
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.66 E-value=5.3e+02 Score=24.53 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=53.3
Q ss_pred cEEEEEECCC------ceeeeeCCCCCCCCCcccEEEECCe-EEEEEecC-----CCCEEEEEEEcC-CeeEEEEEEcCC
Q 045735 236 HVIISFDLSD------EVIQEIESPCTPELTHGPLGLYDNS-LSLIALDE-----IKKCYQLWVLKE-RCWIKQFTIGPF 302 (378)
Q Consensus 236 ~~il~fD~~~------e~~~~i~~P~~~~~~~~~l~~~~g~-L~~~~~~~-----~~~~~~IW~L~~-~~W~~~~~i~~~ 302 (378)
..|...|+.+ .+...+.. .........-..-+|+ |....... ....+.+|-++. +.+.....+...
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSD-DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSC-SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEe-cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 4799999988 65554430 1111100111223665 44444322 124666666763 534333333321
Q ss_pred -CcceeceEEEECCeEEEEee-CC--EEEEEeCCCCeEEEE
Q 045735 303 -IEAYNPLGLWKNGEIFLESS-DG--QLLLYDPNAQEMRDL 339 (378)
Q Consensus 303 -~~~~~~~~~~~~g~ill~~~-~~--~~~~yd~~t~~~~~v 339 (378)
.....-..+..+|++++..+ ++ +++.+|+++++++.+
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l 280 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL 280 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeec
Confidence 11222234455888776643 33 799999988887765
No 229
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.14 E-value=4e+02 Score=22.95 Aligned_cols=144 Identities=7% Similarity=-0.010 Sum_probs=68.0
Q ss_pred ceeEEEEEcCCCCcccccCCCCCCCccccCCCceEE--Cce-EEEEeeecCC--ccEEEEEECCCceeeeeCCCCCCCCC
Q 045735 186 FSHIAVYNLSTDSWRGFRGFKLGRDYVCGRIDSTYW--NGV-CYWLAREEGE--NHVIISFDLSDEVIQEIESPCTPELT 260 (378)
Q Consensus 186 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~--~~~il~fD~~~e~~~~i~~P~~~~~~ 260 (378)
...+.+++..++..+.+... .... ....+. +|. +++....... ...|..+|+.+.+...+.-... ...
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~--~~~~----~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~ 239 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD--TAWL----GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAE-GES 239 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE--SSCE----EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCT-TEE
T ss_pred cceEEEEECCCCcEEeeccC--Cccc----ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCC-Ccc
Confidence 44566677777665544311 0000 011222 354 5555532210 0368889988776655432111 100
Q ss_pred cccEE-EECCe-EEEEEecCCCCE--EEEEEEcCCeeEEEEEEcCCCcceeceEEEE-CCeEEEEe--------------
Q 045735 261 HGPLG-LYDNS-LSLIALDEIKKC--YQLWVLKERCWIKQFTIGPFIEAYNPLGLWK-NGEIFLES-------------- 321 (378)
Q Consensus 261 ~~~l~-~~~g~-L~~~~~~~~~~~--~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~g~ill~~-------------- 321 (378)
...+. .-+|+ |.+......... +.+|-++......+... +.. . ..+.. +|.+++..
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM---PPC-S-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC---CSE-E-EEEECSSSSEEEEEECCC----------
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC---CCC-C-CCccCCCCceEEEecCCcceeecccccc
Confidence 01111 22565 554443223333 55554443333332222 112 2 44555 77766542
Q ss_pred ---eCCEEEEEeCCCCeEEEEEE
Q 045735 322 ---SDGQLLLYDPNAQEMRDLGL 341 (378)
Q Consensus 322 ---~~~~~~~yd~~t~~~~~v~~ 341 (378)
.+..++.+|+++++.+.+..
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEEEE
T ss_pred ccCCCCcEEEEecccCceEEccC
Confidence 23679999999988776654
No 230
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=20.80 E-value=3.8e+02 Score=22.60 Aligned_cols=94 Identities=12% Similarity=0.030 Sum_probs=46.2
Q ss_pred EEEEEECCC-ce-eeeeCCCCCCCCCcccEE-EECCeEEEEEecCCCCEEEEEEEcCCeeEEEEEEcCCCcceeceEEEE
Q 045735 237 VIISFDLSD-EV-IQEIESPCTPELTHGPLG-LYDNSLSLIALDEIKKCYQLWVLKERCWIKQFTIGPFIEAYNPLGLWK 313 (378)
Q Consensus 237 ~il~fD~~~-e~-~~~i~~P~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~L~~~~W~~~~~i~~~~~~~~~~~~~~ 313 (378)
.|..+|+.+ .+ ...+..... .. ..+. .-+|.+.+... ....+.||-+....-.... .... -...+.+..
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~--~v-~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~--~~~~-~~~~~~~~~ 269 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEK--SI-SDMQFSPDLTYFITSS--RDTNSFLVDVSTLQVLKKY--ETDC-PLNTAVITP 269 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSS--CE-EEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEE--ECSS-CEEEEEECS
T ss_pred EEEEEECCCCcEeEEEEecCCC--ce-eEEEECCCCCEEEEec--CCceEEEEECCCCceeeee--cCCC-CceeEEecC
Confidence 799999987 33 333332211 10 1111 12566555444 5678999987762222222 2111 122233333
Q ss_pred CCeEEEE-eeCC--------------EEEEEeCCCCeEEE
Q 045735 314 NGEIFLE-SSDG--------------QLLLYDPNAQEMRD 338 (378)
Q Consensus 314 ~g~ill~-~~~~--------------~~~~yd~~t~~~~~ 338 (378)
++..++. ..++ .+..||.++++...
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 309 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG 309 (369)
T ss_dssp SSSEEEEEECCC-------------CEEEEEETTTCCEEE
T ss_pred CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh
Confidence 4444433 2222 68999998876544
Done!